Psyllid ID: psy16220

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDPPVSFNR
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccHHHHHHHHHHHHccccEEEcccccccccccccHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHcccccHHcHHcHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHcccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHccccEEEEcccccccEccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccEEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEcccccccccHHcccccccccHHHHcc
Coil and Loop (DISEMBL)
mpeqvrfdGRVAIVTGAGAGLGRSYALLLAERGASVvvndlggqrdgdgksskAADTVVAEIRSkggkavpnynsvvdGDKIVQTALEnfgridivinnagilrdksfarisdtdwqlVQDVHLTGafrvsraawphmkkqnyGRLVMtasnsgllgnfgqaNYSAAKMALVGLSNtlsiegeknnihcnvivptaasrltedilppgsypvkgfdppvsfnr
Flexible Loop (DISEMBL)
mpeqvrfdgrvaiVTGAGAGLGRSYALLLAERGASVVVNdlggqrdgdgksskaADTVVAEirskggkavpnynsvvDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAfrvsraawphmKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPpgsypvkgfdppvsfnr
Low Complexity Region (SEG)
MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDPPVSFNR
Disordered region (IsUnstruct)
******FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL**************************KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDIL******************
Disordered Region (DISOPRED)
***QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG****SKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPP*S*****FDPPVSFN*
Disordered Region (DISEMBL)
MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ************TVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDPPVSFNR
Disordered Region (DISPRO)
*****RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRD*D*KSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDPP*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDPPVSFNR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
P97852	735	Peroxisomal multifunction	yes	N/A	0.923	0.280	0.694	8e-82
P51660	735	Peroxisomal multifunction	yes	N/A	0.923	0.280	0.689	1e-81
Q9VXJ0	598	Peroxisomal multifunction	yes	N/A	0.910	0.339	0.674	2e-81
P51659	736	Peroxisomal multifunction	yes	N/A	0.923	0.279	0.674	6e-80
Q9NKW1	441	Peroxisomal multifunction	yes	N/A	0.910	0.460	0.635	9e-74
Q02207	900	Peroxisomal hydratase-deh	yes	N/A	0.928	0.23	0.596	3e-67
P22414	906	Peroxisomal hydratase-deh	N/A	N/A	0.856	0.210	0.591	8e-65
P96825	286	Putative short-chain type	yes	N/A	0.887	0.692	0.606	8e-65
Q01373	894	Peroxisomal hydratase-deh	N/A	N/A	0.869	0.217	0.608	1e-64
P73574	247	3-oxoacyl-[acyl-carrier-p	N/A	N/A	0.896	0.809	0.395	5e-32

>sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus GN=Hsd17b4 PE=1 SV=3

 Score =  303 bits (775), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 143/206 (69%), Positives = 170/206 (82%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +RFDGRV +VTGAG GLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct: 1   MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EIR +GGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++Q
Sbjct: 61  EIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQ 120

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            VHL G+F+V+RAAW HMKKQNYGR++MTAS SG+ GNFGQANYSAAK+ L+GL+NTL I
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180

Query: 181 EGEKNNIHCNVIVPTAASRLTEDILP 206
           EG KNNIHCN I P A SR+TE ++P
Sbjct: 181 EGRKNNIHCNTIAPNAGSRMTETVMP 206

Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Catalyzes the formation of 3-ketoacyl-CoA intermediates from both straight-chain and 2-methyl-branched-chain fatty acids.
Rattus norvegicus (taxid: 10116)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 1EC: 9

>sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 OS=Mus musculus GN=Hsd17b4 PE=1 SV=3

 Score =  302 bits (773), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 142/206 (68%), Positives = 170/206 (82%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +RFDGRV +VTGAG GLGR+YAL  AERGA V+VNDLGG   G GK S AAD VVA
Sbjct: 1   MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVIVNDLGGDFKGIGKGSSAADKVVA 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EIR KGGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++ 
Sbjct: 61  EIRRKGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIH 120

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            VHL G+F+V+RAAW HMKKQNYGR++MT+S SG+ GNFGQANYSAAK+ ++GL NTL+I
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQNYGRILMTSSASGIYGNFGQANYSAAKLGILGLCNTLAI 180

Query: 181 EGEKNNIHCNVIVPTAASRLTEDILP 206
           EG KNNIHCN I P A SR+TE +LP
Sbjct: 181 EGRKNNIHCNTIAPNAGSRMTETVLP 206

Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Catalyzes the formation of 3-ketoacyl-CoA intermediates from both straight-chain and 2-methyl-branched-chain fatty acids.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|Q9VXJ0|DHB4_DROME Peroxisomal multifunctional enzyme type 2 OS=Drosophila melanogaster GN=Mfe2 PE=1 SV=1

 Score =  301 bits (772), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 137/203 (67%), Positives = 174/203 (85%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           ++R+DGRVA+VTGAGAGLGR YALL AERGA VVVNDLGG   GDG S +AAD VV EIR
Sbjct: 7   KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR 66

Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             GG+AV +YNSV+DG K+++TA++ FGR+DI++NNAGILRD+S  + S+ DW LV DVH
Sbjct: 67  KAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH 126

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ NY+AAKM L+GL+NT++IEG 
Sbjct: 127 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA 186

Query: 184 KNNIHCNVIVPTAASRLTEDILP 206
           +NN+ CNVIVPTAASR+TE ILP
Sbjct: 187 RNNVLCNVIVPTAASRMTEGILP 209

Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids.

Drosophila melanogaster (taxid: 7227)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3

 Score =  296 bits (759), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 139/206 (67%), Positives = 171/206 (83%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +RFDGRV +VTGAGAGLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct: 1   MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVE 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EIR +GGKAV NY+SV +G+K+V+TAL+ FGRID+V+NNAGILRD+SFARISD DW ++ 
Sbjct: 61  EIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIH 120

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            VHL G+F+V+RAAW HMKKQ YGR++MT+S SG+ GNFGQANYSAAK+ L+GL+N+L+I
Sbjct: 121 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 180

Query: 181 EGEKNNIHCNVIVPTAASRLTEDILP 206
           EG K+NIHCN I P A SR+T+ ++P
Sbjct: 181 EGRKSNIHCNTIAPNAGSRMTQTVMP 206

Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Catalyzes the formation of 3-ketoacyl-CoA intermediates from both straight-chain and 2-methyl-branched-chain fatty acids.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 9

>sp|Q9NKW1|MFEA_DICDI Peroxisomal multifunctional enzyme A OS=Dictyostelium discoideum GN=mfeA PE=2 SV=1

 Score =  276 bits (705), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 129/203 (63%), Positives = 162/203 (79%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           + F  +V IVTGAG G+G+ YAL  A+RGA VVVNDLGG   G G SSKAAD VV EI++
Sbjct: 3   LNFKDKVVIVTGAGGGIGKVYALEFAKRGAKVVVNDLGGSHTGQGSSSKAADKVVEEIKA 62

Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            GG AV NY+SV DG+KIVQTA+++FG +DI+INNAGILRD SF +++D DW LV  VH 
Sbjct: 63  AGGTAVANYDSVEDGEKIVQTAMDSFGGVDILINNAGILRDVSFGKMTDGDWDLVYRVHA 122

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            GA+++SRAAW HM+++N+GR++MT+S +GL GNFGQANY + KMALVGLSNTL+ EG+ 
Sbjct: 123 KGAYKLSRAAWNHMREKNFGRIIMTSSAAGLYGNFGQANYGSMKMALVGLSNTLAQEGKS 182

Query: 185 NNIHCNVIVPTAASRLTEDILPP 207
            NIHCN I P AASRLTE ++PP
Sbjct: 183 KNIHCNTIAPIAASRLTESVMPP 205

Enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Protects the cells from the increase of the harmful xenobiotic fatty acids incorporated from their diets and optimizes cellular lipid composition for proper development.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=1 SV=1

 Score =  254 bits (649), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 124/208 (59%), Positives = 161/208 (77%), Gaps = 1/208 (0%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           MP  + F  RV ++TGAG GLG+ YAL  A RGA VVVNDLGG   G G +SKAAD VV 
Sbjct: 1   MPGNLSFKDRVVVITGAGGGLGKVYALAYASRGAKVVVNDLGGTLGGSGHNSKAADLVVD 60

Query: 61  EIRSKGGKAVPNYNSV-VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           EI+  GG AV NY+SV  +G+KI++TA++ FGR+D++INNAGILRD SFA++++ ++  V
Sbjct: 61  EIKKAGGIAVANYDSVNENGEKIIETAIKEFGRVDVLINNAGILRDVSFAKMTEREFASV 120

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            DVHLTG +++SRAAWP+M+ Q +GR++ TAS +GL GNFGQANYSAAKM LVGL+ TL+
Sbjct: 121 VDVHLTGGYKLSRAAWPYMRSQKFGRIINTASPAGLFGNFGQANYSAAKMGLVGLAETLA 180

Query: 180 IEGEKNNIHCNVIVPTAASRLTEDILPP 207
            EG K NI+ N I P A SR+TE++LPP
Sbjct: 181 KEGAKYNINVNSIAPLARSRMTENVLPP 208

Second trifunctional enzyme acting on the beta-oxidation pathway for fatty acids, possessing hydratase-dehydrogenase-epimerase activities. Converts trans-2-enoyl-CoA via D-3-hydroxyacyl-CoA to 3-ketoacyl-CoA.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: n

EC: 1

EC: 2

>sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2

 Score =  246 bits (629), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 120/203 (59%), Positives = 155/203 (76%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           V F  +V I+TGAG GLG+ Y+L  A+ GA VVVNDLGG  +G G +SKAAD VV EI  
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63

Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            GG AV +YN+V+DGDKIV+TA++NFG + ++INNAGILRD S  ++++ D++LV DVHL
Sbjct: 64  NGGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHL 123

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            GAF V++AAWP+ +KQ YGR+V T+S +GL GNFGQANY++AK AL+G + TL+ EG K
Sbjct: 124 NGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAK 183

Query: 185 NNIHCNVIVPTAASRLTEDILPP 207
            NI  N I P A SR+TE ILPP
Sbjct: 184 YNIKANAIAPLARSRMTESILPP 206

Second trifunctional enzyme acting on the beta-oxidation pathway for fatty acids, possessing hydratase-dehydrogenase-epimerase activities. Converts trans-2-enoyl-CoA via D-3-hydroxyacyl-CoA to 3-ketoacyl-CoA.

Candida tropicalis (taxid: 5482)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: n

EC: 1

EC: 2

>sp|P96825|Y0148_MYCTU Putative short-chain type dehydrogenase/reductase Rv0148 OS=Mycobacterium tuberculosis GN=Rv0148 PE=1 SV=3

 Score =  246 bits (628), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 122/201 (60%), Positives = 148/201 (73%), Gaps = 3/201 (1%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           RV +VTGAG GLGR YAL LA  GASVVVNDLGG RDG G  S  AD VVAEIR KGG+A
Sbjct: 7   RVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRA 66

Query: 70  VPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           V NY+SV   D    I++TAL+ FG +  V++NAGILRD +F ++S  +W  V  VHL G
Sbjct: 67  VANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYG 126

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            + V RAAWPH ++Q+YGR+V+  S SGL GNFGQ NY AAK+ LVGL NTL++EG K N
Sbjct: 127 GYHVLRAAWPHFREQSYGRVVVATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYN 186

Query: 187 IHCNVIVPTAASRLTEDILPP 207
           IH N + P AA+R+T+DILPP
Sbjct: 187 IHANALAPIAATRMTQDILPP 207

Mycobacterium tuberculosis (taxid: 1773)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fox-2 PE=1 SV=1

 Score =  246 bits (627), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 126/207 (60%), Positives = 162/207 (78%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M EQ+RFDG+V +VTGAG GLG++Y L    RGASVVVNDLG    G+G S+KAAD VV 
Sbjct: 1   MAEQLRFDGQVVVVTGAGGGLGKAYCLFFGSRGASVVVNDLGASFKGEGNSTKAADVVVN 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EI++ GGKAV NY+SV +GDKI++TA++ FGRIDI+INNAGILRD SF  + D DW L+ 
Sbjct: 61  EIKAAGGKAVANYDSVENGDKIIETAIKEFGRIDILINNAGILRDISFKNMKDEDWDLIF 120

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            VH+ G+++ +RAAWP+ +KQ +GR++ TAS +GL GNFGQANYSAAK+ +VG + TL+ 
Sbjct: 121 KVHVKGSYKTARAAWPYFRKQKFGRVINTASAAGLFGNFGQANYSAAKLGMVGFTETLAK 180

Query: 181 EGEKNNIHCNVIVPTAASRLTEDILPP 207
           EG K NI  NVI P AASR+TE ++PP
Sbjct: 181 EGLKYNIISNVIAPIAASRMTETVMPP 207

Second trifunctional enzyme acting on the beta-oxidation pathway for fatty acids, possessing hydratase-dehydrogenase-epimerase activities. Converts trans-2-enoyl-CoA via D-3-hydroxyacyl-CoA to 3-ketoacyl-CoA.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: n

EC: 1

EC: 2

>sp|P73574|FABG1_SYNY3 3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabG1 PE=3 SV=1

 Score =  137 bits (346), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 15/215 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              +VA+VTGA  G+G++ AL LA  G  VVVN          +SS AAD VVAEI + G
Sbjct: 4   LTAQVALVTGASRGIGKATALALAATGMKVVVNY--------AQSSTAADAVVAEIIANG 55

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G+A+    +V + D++   ++T L+ F RID+++NNAGI RD    R+   DWQ V D++
Sbjct: 56  GEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTLLLRMKLEDWQAVIDLN 115

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           LTG F  ++A    M KQ  GR++   S +G++GN GQANYSAAK  ++G + T++ E  
Sbjct: 116 LTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELA 175

Query: 184 KNNIHCNVIVP-TAASRLTEDILPPGSYPVKGFDP 217
              +  N + P   A+ +TE++    + P+  F P
Sbjct: 176 SRGVTVNAVAPGFIATDMTENL---NAEPILQFIP 207

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
328711508	721	PREDICTED: peroxisomal multifunctional e	0.932	0.288	0.812	4e-91
328711512	596	PREDICTED: peroxisomal multifunctional e	0.932	0.348	0.812	4e-91
350401830	727	PREDICTED: peroxisomal multifunctional e	0.923	0.283	0.747	7e-88
156554853	722	PREDICTED: peroxisomal multifunctional e	0.919	0.283	0.760	1e-87
340718384	724	PREDICTED: LOW QUALITY PROTEIN: peroxiso	0.919	0.283	0.746	1e-86
390334812	743	PREDICTED: peroxisomal multifunctional e	0.928	0.278	0.763	2e-86
91085817	715	PREDICTED: similar to estradiol 17 beta-	0.923	0.288	0.742	4e-86
383861721	727	PREDICTED: peroxisomal multifunctional e	0.919	0.281	0.731	6e-86
158293426	724	AGAP008667-PA [Anopheles gambiae str. PE	0.910	0.280	0.75	5e-85
328792111	727	PREDICTED: peroxisomal multifunctional e	0.932	0.286	0.706	5e-85

>gi|328711508|ref|XP_003244558.1| PREDICTED: peroxisomal multifunctional enzyme type 2-like isoform 2 [Acyrthosiphon pisum] gi|328711510|ref|XP_003244559.1| PREDICTED: peroxisomal multifunctional enzyme type 2-like isoform 3 [Acyrthosiphon pisum]

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 169/208 (81%), Positives = 193/208 (92%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           +++RFDGRVAIVTGAGAGLG++YALL AERGASVVVNDLGG R GDG SSKAAD+VV EI
Sbjct: 2   DKLRFDGRVAIVTGAGAGLGKAYALLFAERGASVVVNDLGGSRSGDGSSSKAADSVVTEI 61

Query: 63  RSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           RSKGGKAVPNY+SVVDGDK+VQTALENFGRIDIV+NNAGILRDKSFARIS++DW LV DV
Sbjct: 62  RSKGGKAVPNYDSVVDGDKLVQTALENFGRIDIVVNNAGILRDKSFARISESDWNLVHDV 121

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           HL GAF+V++AAWPH +KQNYGR+++T+SNSGL GNFGQANYSAAK+ LVGL NT++IEG
Sbjct: 122 HLKGAFKVTQAAWPHFRKQNYGRVIVTSSNSGLYGNFGQANYSAAKLGLVGLCNTMAIEG 181

Query: 183 EKNNIHCNVIVPTAASRLTEDILPPGSY 210
            KNNI+CNVIVPTAASRLTEDILPP  +
Sbjct: 182 RKNNINCNVIVPTAASRLTEDILPPDFF 209

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328711512|ref|XP_001947608.2| PREDICTED: peroxisomal multifunctional enzyme type 2-like isoform 1 [Acyrthosiphon pisum]

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 169/208 (81%), Positives = 193/208 (92%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           +++RFDGRVAIVTGAGAGLG++YALL AERGASVVVNDLGG R GDG SSKAAD+VV EI
Sbjct: 2   DKLRFDGRVAIVTGAGAGLGKAYALLFAERGASVVVNDLGGSRSGDGSSSKAADSVVTEI 61

Query: 63  RSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           RSKGGKAVPNY+SVVDGDK+VQTALENFGRIDIV+NNAGILRDKSFARIS++DW LV DV
Sbjct: 62  RSKGGKAVPNYDSVVDGDKLVQTALENFGRIDIVVNNAGILRDKSFARISESDWNLVHDV 121

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           HL GAF+V++AAWPH +KQNYGR+++T+SNSGL GNFGQANYSAAK+ LVGL NT++IEG
Sbjct: 122 HLKGAFKVTQAAWPHFRKQNYGRVIVTSSNSGLYGNFGQANYSAAKLGLVGLCNTMAIEG 181

Query: 183 EKNNIHCNVIVPTAASRLTEDILPPGSY 210
            KNNI+CNVIVPTAASRLTEDILPP  +
Sbjct: 182 RKNNINCNVIVPTAASRLTEDILPPDFF 209

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401830|ref|XP_003486274.1| PREDICTED: peroxisomal multifunctional enzyme type 2-like [Bombus impatiens]

 Score =  328 bits (842), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 154/206 (74%), Positives = 182/206 (88%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE++RF  RV IVTGAGAGLGR+YALL A RGASVVVNDLGG R GDGKS+K+AD+VV E
Sbjct: 4   PEELRFVDRVVIVTGAGAGLGRAYALLFASRGASVVVNDLGGSRHGDGKSTKSADSVVNE 63

Query: 62  IRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           I+  GGKAV NY+SV+DG+KIV+TA++ FGRID+V+NNAGILRD+SFA++S+ DW LVQ 
Sbjct: 64  IKKNGGKAVANYDSVLDGEKIVKTAIDAFGRIDVVVNNAGILRDRSFAKMSEADWDLVQS 123

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           VHL GAF+V++AAWP+  KQNYGR++MTASNSGL GNFGQANYSAAKM L+GLSNTL+IE
Sbjct: 124 VHLKGAFKVTQAAWPYFVKQNYGRVIMTASNSGLYGNFGQANYSAAKMGLIGLSNTLAIE 183

Query: 182 GEKNNIHCNVIVPTAASRLTEDILPP 207
           G K NIH NVI+PTA SRLTEDILPP
Sbjct: 184 GRKRNIHTNVIIPTAGSRLTEDILPP 209

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156554853|ref|XP_001606624.1| PREDICTED: peroxisomal multifunctional enzyme type 2-like isoform 1 [Nasonia vitripennis]

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 156/205 (76%), Positives = 180/205 (87%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           + +RFDGRV IVTGAGAGLGR+YALL   RGASVVVNDLGG R GDG S+K ADTVV EI
Sbjct: 4   DNLRFDGRVVIVTGAGAGLGRAYALLFGSRGASVVVNDLGGGRHGDGSSTKIADTVVDEI 63

Query: 63  RSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           R  GGKAV NYN+V+DGDKIVQTA++ FGRIDIVINNAGILRDKSF R+SDTDW L+ DV
Sbjct: 64  RKLGGKAVANYNNVLDGDKIVQTAIDAFGRIDIVINNAGILRDKSFVRMSDTDWDLIHDV 123

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           H+ G+ + +RAAWP+ +KQN+GR+++T+SNSGL GNFGQANYSAAK+ LVGL+NTL+IEG
Sbjct: 124 HVKGSMKTTRAAWPYFRKQNFGRVILTSSNSGLYGNFGQANYSAAKLGLVGLANTLAIEG 183

Query: 183 EKNNIHCNVIVPTAASRLTEDILPP 207
            KNNIH NVIVPTAASRLTEDILPP
Sbjct: 184 VKNNIHTNVIVPTAASRLTEDILPP 208

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340718384|ref|XP_003397648.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal multifunctional enzyme type 2-like [Bombus terrestris]

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 153/205 (74%), Positives = 180/205 (87%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           E++RF  RV IVTGAGAGLGR+YALL A +GASVVVNDLGG R GDGKS+K+AD+VV EI
Sbjct: 5   EELRFVDRVVIVTGAGAGLGRAYALLFASKGASVVVNDLGGSRHGDGKSTKSADSVVNEI 64

Query: 63  RSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           R  GGKAV NY+SV+DG KIV+TA++ FGRID+V+NNAGILRD+SFA++S+ DW LVQ V
Sbjct: 65  RKNGGKAVANYDSVLDGAKIVKTAIDTFGRIDVVVNNAGILRDRSFAKMSEADWDLVQSV 124

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           HL GAF+V++AAWP+  KQNYGR++MTASNSGL GNFGQANYSAAKM L+GLSNTL+IEG
Sbjct: 125 HLKGAFKVTQAAWPYFVKQNYGRIIMTASNSGLYGNFGQANYSAAKMGLIGLSNTLAIEG 184

Query: 183 EKNNIHCNVIVPTAASRLTEDILPP 207
            K NIH NVI+PTA SRLTEDILPP
Sbjct: 185 RKRNIHTNVIIPTAGSRLTEDILPP 209

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390334812|ref|XP_786662.3| PREDICTED: peroxisomal multifunctional enzyme type 2 [Strongylocentrotus purpuratus]

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 158/207 (76%), Positives = 176/207 (85%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M E++RFDGRVA+VTGAG GLG+ YALLLA RGASVVVNDLGG R G GKSS AAD VV 
Sbjct: 1   MGEELRFDGRVALVTGAGGGLGKEYALLLAARGASVVVNDLGGDRAGQGKSSMAADQVVN 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EIRSKGG AV NY+SV DGDK+VQTAL+NFGRIDIVINNAGILRD+SFARISD DW LV 
Sbjct: 61  EIRSKGGNAVANYDSVEDGDKLVQTALDNFGRIDIVINNAGILRDRSFARISDMDWDLVH 120

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            VHL G+F V+RAAWPHMKKQ +GR++MT+S +GL GNFGQ NYSAAK+ LVG+SNTLS 
Sbjct: 121 RVHLRGSFMVTRAAWPHMKKQKFGRIIMTSSAAGLYGNFGQTNYSAAKLGLVGMSNTLSR 180

Query: 181 EGEKNNIHCNVIVPTAASRLTEDILPP 207
           EG K NI CN I P AASRLTEDI+PP
Sbjct: 181 EGIKYNILCNTIAPMAASRLTEDIMPP 207

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|91085817|ref|XP_974784.1| PREDICTED: similar to estradiol 17 beta-dehydrogenase [Tribolium castaneum] gi|270011047|gb|EFA07495.1| hydroxysteroid (17-beta) dehydrogenase 4 [Tribolium castaneum]

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 153/206 (74%), Positives = 178/206 (86%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           +RFDGRV +VTGAGAGLGR+YALL   RGA VVVNDLGG R GDGKSS AAD VV EI+ 
Sbjct: 4   LRFDGRVVVVTGAGAGLGRAYALLFGSRGAKVVVNDLGGGRHGDGKSSSAADAVVEEIKR 63

Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            GG AV +YNSVVDG+K+++TAL+NFGR+D++INNAGILRDKSFARISD DW LV  VHL
Sbjct: 64  NGGTAVADYNSVVDGEKVIKTALDNFGRVDVLINNAGILRDKSFARISDQDWDLVHAVHL 123

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G+F+ ++AA+P  KKQ YGR++MT+SNSGL GNFGQANYSAAKM LVGL++T++IEG K
Sbjct: 124 KGSFKTTQAAFPIFKKQGYGRIIMTSSNSGLYGNFGQANYSAAKMGLVGLASTIAIEGAK 183

Query: 185 NNIHCNVIVPTAASRLTEDILPPGSY 210
           NNIHCNVIVPTAASRLTEDILPP  Y
Sbjct: 184 NNIHCNVIVPTAASRLTEDILPPDLY 209

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861721|ref|XP_003706333.1| PREDICTED: peroxisomal multifunctional enzyme type 2 [Megachile rotundata]

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 150/205 (73%), Positives = 180/205 (87%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P ++RFDG+V IVTGAGAGLGR+YALL A RGASVVVNDLGG R GDG ++K AD VV E
Sbjct: 4   PAELRFDGKVVIVTGAGAGLGRAYALLFASRGASVVVNDLGGGRHGDGSNTKIADEVVKE 63

Query: 62  IRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           I+  GGKAV NY+SV++G KIV+TA++ FGR+D+++NNAGILRDKSFA++S+TDW LVQ+
Sbjct: 64  IKKNGGKAVANYDSVLEGAKIVKTAIDAFGRVDVLVNNAGILRDKSFAKMSETDWDLVQN 123

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           VHL GAF+ ++AAWP+  KQNYGR++MTASNSGL GNFGQANYS+AKM L+GLSNTLSIE
Sbjct: 124 VHLKGAFKTTQAAWPYFSKQNYGRIIMTASNSGLYGNFGQANYSSAKMGLIGLSNTLSIE 183

Query: 182 GEKNNIHCNVIVPTAASRLTEDILP 206
           G K NIH NVI+PTAASRLTEDILP
Sbjct: 184 GRKRNIHTNVIIPTAASRLTEDILP 208

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293426|ref|XP_314766.4| AGAP008667-PA [Anopheles gambiae str. PEST] gi|157016700|gb|EAA10131.4| AGAP008667-PA [Anopheles gambiae str. PEST]

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 153/204 (75%), Positives = 177/204 (86%), Gaps = 1/204 (0%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           +Q+R+DGRV +VTGAGAGLGR YALL A RGA VVVNDLGG   G GKS+ AAD VV EI
Sbjct: 10  KQLRYDGRVVVVTGAGAGLGREYALLFASRGAKVVVNDLGGNFHGQGKSN-AADKVVEEI 68

Query: 63  RSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           R+ GG AVP+YNSVV+GDKIVQTALENFGRID+++NNAGILRD+S ARISD DW L+ DV
Sbjct: 69  RAAGGVAVPDYNSVVEGDKIVQTALENFGRIDVLVNNAGILRDRSLARISDEDWNLIHDV 128

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           HL G+F  +RAAWP MKKQNYGR++MT+SNSG+ GNFGQANYSAAK+ LVGL+NT++IEG
Sbjct: 129 HLKGSFLTTRAAWPVMKKQNYGRIIMTSSNSGVYGNFGQANYSAAKLGLVGLANTVAIEG 188

Query: 183 EKNNIHCNVIVPTAASRLTEDILP 206
            KNNI CNVIVPTAASR+TE ILP
Sbjct: 189 AKNNIQCNVIVPTAASRMTEGILP 212

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792111|ref|XP_393475.3| PREDICTED: peroxisomal multifunctional enzyme type 2-like [Apis mellifera]

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 147/208 (70%), Positives = 181/208 (87%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           E++ F  RV I+TGAGAGLGR+YALL A RGASVVVNDLGG RDGDG S+K AD+VV EI
Sbjct: 4   EKLSFVNRVVIITGAGAGLGRTYALLFASRGASVVVNDLGGSRDGDGSSTKIADSVVNEI 63

Query: 63  RSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           R  GG+AV NY+SV+DG+KIV+TA++ FGRIDI++NNAGILRDKSFA++ ++DW L+Q+V
Sbjct: 64  RKNGGRAVANYDSVLDGEKIVKTAIDAFGRIDILVNNAGILRDKSFAKMLESDWDLIQNV 123

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           HL GAF+ ++AAWP+  KQ YGR++MTASNSGL GNFGQANYSAAKM L+GL+NTL+IEG
Sbjct: 124 HLKGAFKTTQAAWPYFVKQKYGRIIMTASNSGLYGNFGQANYSAAKMGLIGLTNTLAIEG 183

Query: 183 EKNNIHCNVIVPTAASRLTEDILPPGSY 210
           ++ NIH NVI+PTAASRLTEDILPP  +
Sbjct: 184 KQKNIHTNVIIPTAASRLTEDILPPDFF 211

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
RGD|621806	735	Hsd17b4 "hydroxysteroid (17-be	0.923	0.280	0.694	1.3e-75
UNIPROTKB|Q6IN39	751	Hsd17b4 "Hsd17b4 protein" [Rat	0.923	0.274	0.694	1.3e-75
MGI|MGI:105089	735	Hsd17b4 "hydroxysteroid (17-be	0.923	0.280	0.689	2.1e-75
FB|FBgn0030731	598	Mfe2 "peroxisomal Multifunctio	0.910	0.339	0.674	1.2e-74
ZFIN|ZDB-GENE-040421-1	725	hsd17b4 "hydroxysteroid (17-be	0.928	0.285	0.671	1.5e-74
UNIPROTKB|Q0IIL6	736	HSD17B4 "Uncharacterized prote	0.923	0.279	0.699	1.9e-74
UNIPROTKB|E1BW32	624	HSD17B4 "Uncharacterized prote	0.923	0.330	0.685	6.5e-74
UNIPROTKB|F1NKH9	678	HSD17B4 "Uncharacterized prote	0.923	0.303	0.685	6.5e-74
UNIPROTKB|E7ER27	500	HSD17B4 "(3R)-hydroxyacyl-CoA	0.923	0.412	0.674	6.5e-74
UNIPROTKB|P51659	736	HSD17B4 "Peroxisomal multifunc	0.923	0.279	0.674	6.5e-74

RGD|621806 Hsd17b4 "hydroxysteroid (17-beta) dehydrogenase 4" [Rattus norvegicus (taxid:10116)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 143/206 (69%), Positives = 170/206 (82%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDGRV +VTGAG GLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct:     1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             EIR +GGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++Q
Sbjct:    61 EIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQ 120

Query:   121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              VHL G+F+V+RAAW HMKKQNYGR++MTAS SG+ GNFGQANYSAAK+ L+GL+NTL I
Sbjct:   121 RVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180

Query:   181 EGEKNNIHCNVIVPTAASRLTEDILP 206
             EG KNNIHCN I P A SR+TE ++P
Sbjct:   181 EGRKNNIHCNTIAPNAGSRMTETVMP 206

GO:0000038 "very long-chain fatty acid metabolic process" evidence=IEA;ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISO

GO:0005102 "receptor binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO

GO:0008203 "cholesterol metabolic process" evidence=NAS

GO:0008209 "androgen metabolic process" evidence=ISO

GO:0008210 "estrogen metabolic process" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016508 "long-chain-enoyl-CoA hydratase activity" evidence=ISO

GO:0016853 "isomerase activity" evidence=IEA

GO:0030283 "testosterone dehydrogenase [NAD(P)

GO:0032934 "sterol binding" evidence=IEA

GO:0033989 "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity" evidence=IEA

GO:0036111 "very long-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0036112 "medium-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0044594 "17-beta-hydroxysteroid dehydrogenase (NAD+) activity" evidence=ISO

GO:0060009 "Sertoli cell development" evidence=IEA;ISO

UNIPROTKB|Q6IN39 Hsd17b4 "Hsd17b4 protein" [Rattus norvegicus (taxid:10116)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 143/206 (69%), Positives = 170/206 (82%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDGRV +VTGAG GLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct:     1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             EIR +GGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++Q
Sbjct:    61 EIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQ 120

Query:   121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              VHL G+F+V+RAAW HMKKQNYGR++MTAS SG+ GNFGQANYSAAK+ L+GL+NTL I
Sbjct:   121 RVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180

Query:   181 EGEKNNIHCNVIVPTAASRLTEDILP 206
             EG KNNIHCN I P A SR+TE ++P
Sbjct:   181 EGRKNNIHCNTIAPNAGSRMTETVMP 206

GO:0000166 "nucleotide binding" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

MGI|MGI:105089 Hsd17b4 "hydroxysteroid (17-beta) dehydrogenase 4" [Mus musculus (taxid:10090)]

 Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
 Identities = 142/206 (68%), Positives = 170/206 (82%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDGRV +VTGAG GLGR+YAL  AERGA V+VNDLGG   G GK S AAD VVA
Sbjct:     1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVIVNDLGGDFKGIGKGSSAADKVVA 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             EIR KGGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++ 
Sbjct:    61 EIRRKGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIH 120

Query:   121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              VHL G+F+V+RAAW HMKKQNYGR++MT+S SG+ GNFGQANYSAAK+ ++GL NTL+I
Sbjct:   121 RVHLRGSFQVTRAAWDHMKKQNYGRILMTSSASGIYGNFGQANYSAAKLGILGLCNTLAI 180

Query:   181 EGEKNNIHCNVIVPTAASRLTEDILP 206
             EG KNNIHCN I P A SR+TE +LP
Sbjct:   181 EGRKNNIHCNTIAPNAGSRMTETVLP 206

GO:0000038 "very long-chain fatty acid metabolic process" evidence=IMP

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISO

GO:0005102 "receptor binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006635 "fatty acid beta-oxidation" evidence=ISO;IMP

GO:0008152 "metabolic process" evidence=IEA

GO:0008209 "androgen metabolic process" evidence=ISO

GO:0008210 "estrogen metabolic process" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016508 "long-chain-enoyl-CoA hydratase activity" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0033989 "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity" evidence=IEA

GO:0036111 "very long-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0036112 "medium-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0044594 "17-beta-hydroxysteroid dehydrogenase (NAD+) activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0060009 "Sertoli cell development" evidence=IMP

FB|FBgn0030731 Mfe2 "peroxisomal Multifunctional enzyme type 2" [Drosophila melanogaster (taxid:7227)]

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 137/203 (67%), Positives = 174/203 (85%)

Query:     4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
             ++R+DGRVA+VTGAGAGLGR YALL AERGA VVVNDLGG   GDG S +AAD VV EIR
Sbjct:     7 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR 66

Query:    64 SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               GG+AV +YNSV+DG K+++TA++ FGR+DI++NNAGILRD+S  + S+ DW LV DVH
Sbjct:    67 KAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH 126

Query:   124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
             L G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ NY+AAKM L+GL+NT++IEG 
Sbjct:   127 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA 186

Query:   184 KNNIHCNVIVPTAASRLTEDILP 206
             +NN+ CNVIVPTAASR+TE ILP
Sbjct:   187 RNNVLCNVIVPTAASRMTEGILP 209

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0033540 "fatty acid beta-oxidation using acyl-CoA oxidase" evidence=IC

GO:0080023 "3R-hydroxyacyl-CoA dehydratase activity" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0004300 "enoyl-CoA hydratase activity" evidence=IDA

GO:0005777 "peroxisome" evidence=IC

ZFIN|ZDB-GENE-040421-1 hsd17b4 "hydroxysteroid (17-beta) dehydrogenase 4" [Danio rerio (taxid:7955)]

 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 139/207 (67%), Positives = 171/207 (82%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDG+V +VTGAG GLGR YAL   +RGA+V+VNDLGG   G GKSS AAD VV 
Sbjct:     1 MSVPLRFDGKVVLVTGAGGGLGREYALAFGQRGAAVIVNDLGGDIKGGGKSSAAADKVVE 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             EIR+ GGKAV NY+SV DG+K++QTAL+ FGRID+V+NNAGILRD+SFAR SD DW L+Q
Sbjct:    61 EIRAAGGKAVANYDSVEDGEKLIQTALDAFGRIDVVVNNAGILRDRSFARTSDVDWDLIQ 120

Query:   121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              VHL G+F V+RAAW HMK+Q +GR++MT+S +G+ GNFGQANYSAAK+ L+GL+NTL+I
Sbjct:   121 RVHLRGSFLVTRAAWNHMKQQKFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLANTLAI 180

Query:   181 EGEKNNIHCNVIVPTAASRLTEDILPP 207
             EG+K NIHCN I PTA SRLTE ++PP
Sbjct:   181 EGQKYNIHCNTIAPTAGSRLTETVMPP 207

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q0IIL6 HSD17B4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 144/206 (69%), Positives = 170/206 (82%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RF+GRV +VTGAG GLGR+YAL  AERGASVVVNDLGG   G GK S AAD VV 
Sbjct:     1 MASTLRFNGRVVLVTGAGGGLGRAYALAFAERGASVVVNDLGGDFTGVGKGSLAADKVVE 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             EIR KGGKAV NY+SV +G+KIV+TAL+ FGRIDIVINNAGILRD+SF+RISD DW  +Q
Sbjct:    61 EIRRKGGKAVANYDSVEEGEKIVKTALDAFGRIDIVINNAGILRDRSFSRISDEDWDKIQ 120

Query:   121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              VHL G+F V+RAAW HMKKQ +GR++MT+S SG+ GNFGQANY AAK+ L+GLSN L++
Sbjct:   121 RVHLRGSFLVTRAAWDHMKKQKFGRIIMTSSASGIYGNFGQANYCAAKLGLLGLSNCLAV 180

Query:   181 EGEKNNIHCNVIVPTAASRLTEDILP 206
             EG+KNNIHCN I PTA SR+T+ ILP
Sbjct:   181 EGKKNNIHCNTIAPTAGSRMTQSILP 206

GO:0060009 "Sertoli cell development" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E1BW32 HSD17B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 142/207 (68%), Positives = 171/207 (82%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDGRV +VTGAG GLGR+YAL  AERGASVVVNDLGG   G GKSS AAD VV+
Sbjct:     1 MAAGLRFDGRVVLVTGAGGGLGRAYALAFAERGASVVVNDLGGDFKGYGKSSSAADKVVS 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRI-DIVINNAGILRDKSFARISDTDWQLV 119
             EIR+ GGKAVPNY+SV DG+K+V++ALE FGRI DIVINNAGILRD+SF RISD DW ++
Sbjct:    61 EIRANGGKAVPNYDSVEDGEKLVKSALEAFGRIADIVINNAGILRDRSFVRISDEDWDII 120

Query:   120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
               +HL G+F V+RAAW HMK Q +GR++MT+S +G+ GNFGQANYSAAK+ L+GLSNT++
Sbjct:   121 HRIHLRGSFLVTRAAWNHMKNQKFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNTIA 180

Query:   180 IEGEKNNIHCNVIVPTAASRLTEDILP 206
             IEG K NIHCN I PTA SRLT+ ++P
Sbjct:   181 IEGRKYNIHCNTIAPTAGSRLTQTVMP 207

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NKH9 HSD17B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 142/207 (68%), Positives = 171/207 (82%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDGRV +VTGAG GLGR+YAL  AERGASVVVNDLGG   G GKSS AAD VV+
Sbjct:     1 MAAGLRFDGRVVLVTGAGGGLGRAYALAFAERGASVVVNDLGGDFKGYGKSSSAADKVVS 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRI-DIVINNAGILRDKSFARISDTDWQLV 119
             EIR+ GGKAVPNY+SV DG+K+V++ALE FGRI DIVINNAGILRD+SF RISD DW ++
Sbjct:    61 EIRANGGKAVPNYDSVEDGEKLVKSALEAFGRIADIVINNAGILRDRSFVRISDEDWDII 120

Query:   120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
               +HL G+F V+RAAW HMK Q +GR++MT+S +G+ GNFGQANYSAAK+ L+GLSNT++
Sbjct:   121 HRIHLRGSFLVTRAAWNHMKNQKFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNTIA 180

Query:   180 IEGEKNNIHCNVIVPTAASRLTEDILP 206
             IEG K NIHCN I PTA SRLT+ ++P
Sbjct:   181 IEGRKYNIHCNTIAPTAGSRLTQTVMP 207

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0060009 "Sertoli cell development" evidence=IEA

UNIPROTKB|E7ER27 HSD17B4 "(3R)-hydroxyacyl-CoA dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 139/206 (67%), Positives = 171/206 (83%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDGRV +VTGAGAGLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct:     1 MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVE 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             EIR +GGKAV NY+SV +G+K+V+TAL+ FGRID+V+NNAGILRD+SFARISD DW ++ 
Sbjct:    61 EIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIH 120

Query:   121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              VHL G+F+V+RAAW HMKKQ YGR++MT+S SG+ GNFGQANYSAAK+ L+GL+N+L+I
Sbjct:   121 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 180

Query:   181 EGEKNNIHCNVIVPTAASRLTEDILP 206
             EG K+NIHCN I P A SR+T+ ++P
Sbjct:   181 EGRKSNIHCNTIAPNAGSRMTQTVMP 206

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|P51659 HSD17B4 "Peroxisomal multifunctional enzyme type 2" [Homo sapiens (taxid:9606)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 139/206 (67%), Positives = 171/206 (83%)

Query:     1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             M   +RFDGRV +VTGAGAGLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct:     1 MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVE 60

Query:    61 EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             EIR +GGKAV NY+SV +G+K+V+TAL+ FGRID+V+NNAGILRD+SFARISD DW ++ 
Sbjct:    61 EIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIH 120

Query:   121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              VHL G+F+V+RAAW HMKKQ YGR++MT+S SG+ GNFGQANYSAAK+ L+GL+N+L+I
Sbjct:   121 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 180

Query:   181 EGEKNNIHCNVIVPTAASRLTEDILP 206
             EG K+NIHCN I P A SR+T+ ++P
Sbjct:   181 EGRKSNIHCNTIAPNAGSRMTQTVMP 206

GO:0000166 "nucleotide binding" evidence=IEA

GO:0032934 "sterol binding" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0005777 "peroxisome" evidence=NAS;IDA

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=IDA;IMP;TAS

GO:0016508 "long-chain-enoyl-CoA hydratase activity" evidence=IDA;TAS

GO:0036111 "very long-chain fatty-acyl-CoA metabolic process" evidence=IDA

GO:0006635 "fatty acid beta-oxidation" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0036112 "medium-chain fatty-acyl-CoA metabolic process" evidence=IDA

GO:0044594 "17-beta-hydroxysteroid dehydrogenase (NAD+) activity" evidence=IDA

GO:0008209 "androgen metabolic process" evidence=IDA

GO:0008210 "estrogen metabolic process" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0006699 "bile acid biosynthetic process" evidence=TAS

GO:0008206 "bile acid metabolic process" evidence=TAS

GO:0033540 "fatty acid beta-oxidation using acyl-CoA oxidase" evidence=TAS

GO:0033559 "unsaturated fatty acid metabolic process" evidence=TAS

GO:0033989 "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity" evidence=TAS

GO:0036109 "alpha-linolenic acid metabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51660	DHB4_MOUSE	4, ., 2, ., 1, ., 1, 1, 9	0.6893	0.9237	0.2802	yes	N/A
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3538	0.8161	0.7338	yes	N/A
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3626	0.8116	0.7357	yes	N/A
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3670	0.7937	0.7195	yes	N/A
Q5HPW0	FABG_STAEQ	1, ., 1, ., 1, ., 1, 0, 0	0.3617	0.7937	0.7254	yes	N/A
P55541	Y4LA_RHISN	1, ., -, ., -, ., -	0.3265	0.8071	0.6474	yes	N/A
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3670	0.7937	0.7195	yes	N/A
Q02207	FOX2_YEAST	1, ., 1, ., 1, ., n, 1, 2	0.5961	0.9282	0.23	yes	N/A
Q89AG9	FABG_BUCBP	1, ., 1, ., 1, ., 1, 0, 0	0.3297	0.7802	0.7102	yes	N/A
Q8CPI3	FABG_STAES	1, ., 1, ., 1, ., 1, 0, 0	0.3617	0.7937	0.7254	yes	N/A
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3297	0.8026	0.7336	yes	N/A
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3670	0.7937	0.7195	yes	N/A
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3670	0.7937	0.7195	yes	N/A
Q9NKW1	MFEA_DICDI	1, ., 1, ., 1, ., 3, 5	0.6354	0.9103	0.4603	yes	N/A
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3670	0.7937	0.7195	yes	N/A
P51659	DHB4_HUMAN	4, ., 2, ., 1, ., 1, 1, 9	0.6747	0.9237	0.2798	yes	N/A
P0A2C9	FABG_SALTY	1, ., 1, ., 1, ., 1, 0, 0	0.3457	0.8026	0.7336	yes	N/A
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3670	0.7937	0.7195	yes	N/A
P55336	FABG_VIBHA	1, ., 1, ., 1, ., 1, 0, 0	0.3280	0.7982	0.7295	yes	N/A
P96825	Y0148_MYCTU	1, ., 1, ., 1, ., -	0.6069	0.8878	0.6923	yes	N/A
Q9VXJ0	DHB4_DROME	4, ., 2, ., 1, ., 1, 1, 9	0.6748	0.9103	0.3394	yes	N/A
Q8K9J5	FABG_BUCAP	1, ., 1, ., 1, ., 1, 0, 0	0.3160	0.7982	0.7295	yes	N/A
P51831	FABG_BACSU	1, ., 1, ., 1, ., 1, 0, 0	0.3926	0.8071	0.7317	yes	N/A
P97852	DHB4_RAT	4, ., 2, ., 1, ., 1, 1, 9	0.6941	0.9237	0.2802	yes	N/A
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3681	0.8206	0.7561	yes	N/A
P0AEK3	FABG_SHIFL	1, ., 1, ., 1, ., 1, 0, 0	0.3510	0.8026	0.7336	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766
4th Layer	1.1.1.n12	LOW CONFIDENCE prediction!
3rd Layer	4.2.1	LOW CONFIDENCE prediction!
4th Layer	4.2.1.119	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	223
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-126
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-61
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-57
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-57
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	8e-56
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-54
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-52
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-51
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-48
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	6e-46
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-45
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-45
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	7e-43
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	5e-40
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	9e-39
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-38
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-38
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	9e-36
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-35
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-35
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-35
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	8e-35
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-34
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	7e-34
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-33
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-33
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-33
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-33
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-33
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	7e-33
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-32
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-32
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-32
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-32
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-32
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-32
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-31
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-31
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	4e-31
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-30
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-30
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-30
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-30
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	7e-30
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-30
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	9e-30
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-29
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-29
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-29
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	4e-29
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	5e-29
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	6e-29
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-28
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-28
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-28
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-28
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-28
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-28
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-28
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-28
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-27
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-27
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-27
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-27
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	6e-27
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	6e-27
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	8e-27
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-26
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-26
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-26
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-26
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-26
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-26
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	6e-26
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-26
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	7e-26
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-26
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	8e-26
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	9e-26
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-25
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	4e-25
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	6e-25
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-25
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	6e-25
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	7e-25
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	8e-25
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	9e-25
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-24
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-24
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-24
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-24
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-24
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-24
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-24
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-23
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-23
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-23
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	5e-23
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	6e-23
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-22
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-22
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	3e-22
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	4e-22
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-22
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	5e-22
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	6e-22
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	7e-22
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-21
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-21
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-21
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-21
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	7e-21
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	9e-21
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-20
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-20
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-20
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-20
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-20
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-20
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-20
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-20
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-20
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-20
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-20
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	7e-20
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-20
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	8e-20
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	8e-20
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	8e-20
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	8e-20
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-19
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-19
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-19
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-19
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-19
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-19
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-19
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	9e-19
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-18
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-18
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-18
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-18
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-18
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-18
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-18
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-18
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	5e-18
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	5e-18
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	5e-18
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	6e-18
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	8e-18
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-17
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-17
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-17
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	7e-17
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	8e-17
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	8e-17
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-16
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-16
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-16
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-16
pfam08659	181	pfam08659, KR, KR domain	2e-16
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	7e-16
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-15
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-15
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-15
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	3e-15
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	4e-15
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	4e-15
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-15
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	6e-15
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	9e-15
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-14
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-14
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-14
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-14
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-14
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-13
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-13
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-13
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-13
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-13
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	4e-13
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	5e-13
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	6e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	9e-13
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	9e-13
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-12
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-12
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-12
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-12
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-12
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-12
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	5e-12
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-11
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-11
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	4e-11
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-11
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-10
cd08955	376	cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (	1e-10
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	1e-10
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-10
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-10
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	4e-10
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	5e-10
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	7e-10
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-09
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	1e-09
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	4e-09
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	6e-09
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-08
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-08
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	2e-08
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	4e-08
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	5e-08
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-07
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-07
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-07
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	1e-06
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-06
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-06
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	5e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-05
cd08954	452	cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (	2e-05
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	3e-05
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-05
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	5e-05
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	8e-05
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	9e-05
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	1e-04
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-04
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	3e-04
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	7e-04
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	0.002
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	0.003

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  357 bits (919), Expect = e-126
 Identities = 136/203 (66%), Positives = 169/203 (83%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           +RFDGRV +VTGAG GLGR+YAL  AERGA VVVNDLGG R G GKSS AAD VV EI++
Sbjct: 1   LRFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKA 60

Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            GGKAV NY+SV DG+KIV+TA++ FGR+DI++NNAGILRD+SFA++S+ DW LV  VHL
Sbjct: 61  AGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHL 120

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G+F+V+RAAWP+M+KQ +GR++ T+S +GL GNFGQANYSAAK+ L+GLSNTL+IEG K
Sbjct: 121 KGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAK 180

Query: 185 NNIHCNVIVPTAASRLTEDILPP 207
            NI CN I P A SR+TE ++P 
Sbjct: 181 YNITCNTIAPAAGSRMTETVMPE 203

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  194 bits (494), Expect = 1e-61
 Identities = 87/208 (41%), Positives = 121/208 (58%), Gaps = 9/208 (4%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           DGRV IVTGAG G+GR++AL  A  GA VVVND+G   DG      AA  VV EI + GG
Sbjct: 5   DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG 64

Query: 68  KAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +AV N + + D D    +V  A+E FG +D+++NNAGILRD+  A +S+ +W  V  VHL
Sbjct: 65  EAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHL 124

Query: 125 TGAFRVSRAAWPHMK------KQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
            G F   R A  + +      +    R++ T+S +GL G+ GQ NYSAAK  +  L+   
Sbjct: 125 KGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVA 184

Query: 179 SIEGEKNNIHCNVIVPTAASRLTEDILP 206
           + E  +  +  N I P A +R+TE +  
Sbjct: 185 AAELGRYGVTVNAIAPAARTRMTETVFA 212

Length = 286

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  180 bits (459), Expect = 6e-57
 Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 22/208 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+ A+VTGA  G+GR+ AL LA  GA VV+ D          + +AA+ + AE+R+ 
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDS---------NEEAAEALAAELRAA 52

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           GG+A      V +  +V     +++ A+E FG +DI++NNAGI RD    R+S+ DW  V
Sbjct: 53  GGEARVLVFDVSDEAAV---RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRV 109

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            DV+LTG F V RAA P M K  YGR+V  +S SG+ GN GQ NYSAAK  ++G +  L+
Sbjct: 110 IDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALA 169

Query: 180 IEGEKNNIHCNVIVP----TAASRLTED 203
           +E     I  N + P    T  +    +
Sbjct: 170 LELASRGITVNAVAPGFIDTDMTEGLPE 197

Length = 246

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  180 bits (459), Expect = 7e-57
 Identities = 76/192 (39%), Positives = 111/192 (57%), Gaps = 11/192 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +G+VA+VTGA  G+GR+ A  LA +GA+VV+N           S   A+ +VAEI + 
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS--------SEAGAEALVAEIGAL 53

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GGKA+     V D +   + V  A   FG +DI++NNAGI RD    R+ + DW  V D 
Sbjct: 54  GGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDT 113

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LTG F +++A    M KQ  GR++  +S  GL+GN GQANY+A+K  ++G + +L+ E 
Sbjct: 114 NLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLAREL 173

Query: 183 EKNNIHCNVIVP 194
               I  N + P
Sbjct: 174 ASRGITVNAVAP 185

Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  177 bits (451), Expect = 8e-56
 Identities = 75/191 (39%), Positives = 109/191 (57%), Gaps = 18/191 (9%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGA  G+GR+ AL LA  GA V V D          S +AA   V EI++ GG A
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDR---------SEEAAAETVEEIKALGGNA 51

Query: 70  ------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
                 V +  +V   + +V+     FG +DI++NNAGI RD    R+S+ DW  V +V+
Sbjct: 52  AALEADVSDREAV---EALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVN 108

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           LTG F V++A    M K+  GR++  +S  GL+GN GQANY+A+K  ++G + +L+ E  
Sbjct: 109 LTGVFNVTQAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELA 168

Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 169 SRGITVNAVAP 179

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  175 bits (445), Expect = 1e-54
 Identities = 82/192 (42%), Positives = 111/192 (57%), Gaps = 11/192 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              GRVA+VTGA  GLGR+ AL LA  GA VVV+             +AA+ +V  + + 
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRS--------DEEAAEELVEAVEAL 54

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +A      V D       V  A+E FGRIDI++NNAGI  DK  A +SD +W  V DV
Sbjct: 55  GRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDV 114

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L+G F + RA  P M+KQ  GR+V  +S +GL G  G++NY+AAK  LVGL+  L+ E 
Sbjct: 115 NLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALAREL 174

Query: 183 EKNNIHCNVIVP 194
            +  I  N++ P
Sbjct: 175 AEYGITVNMVAP 186

Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  169 bits (430), Expect = 1e-52
 Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 11/186 (5%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
           A+VTGA  G+GR+ AL LA+ GA V++            S + A+ VV E+++ G KA+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITY--------RSSEEGAEEVVEELKAYGVKALG 52

Query: 72  ---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
              + +   D   +V+   E  G IDI++NNAGI RD    R+ + DW  V D +LTG F
Sbjct: 53  VVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVF 112

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
            +++A    M KQ  GR++  +S  GL+GN GQANY+A+K  ++G + +L+ E    NI 
Sbjct: 113 NLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNIT 172

Query: 189 CNVIVP 194
            N + P
Sbjct: 173 VNAVAP 178

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  165 bits (420), Expect = 4e-51
 Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 13/186 (6%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
           A+VTGA +G+GR+ A  LA  GA VV+ D    R+ +  +       +A I + GG AV 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLAD----RNEEALAE------LAAIEALGGNAVA 50

Query: 72  NYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
               V D +    +V+ ALE FGR+DI++NNAGI R      ++D DW  V DV+LTG F
Sbjct: 51  VQADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVF 110

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
            ++RAA PHMKKQ  GR+V  +S +GL    GQA Y+A+K AL GL+ +L++E     I 
Sbjct: 111 LLTRAALPHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIR 170

Query: 189 CNVIVP 194
            N + P
Sbjct: 171 VNAVAP 176

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  160 bits (407), Expect = 2e-48
 Identities = 85/207 (41%), Positives = 117/207 (56%), Gaps = 19/207 (9%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+VTGA AGLGR+ AL LA  GA+VVVND+         S+  A  V+ EIR+ G 
Sbjct: 11  SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA--------SALDASDVLDEIRAAGA 62

Query: 68  KAVPNYNSVVD---GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           KAV     +      D++V TA+   G +DIV+NNAGI RD+    +SD +W  V  VHL
Sbjct: 63  KAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHL 121

Query: 125 TGAFRVSRAA---WPHMKKQN----YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
            G F ++R A   W    K      YGR+V T+S +GL+G  GQANY AAK  +  L+ +
Sbjct: 122 RGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLS 181

Query: 178 LSIEGEKNNIHCNVIVPTAASRLTEDI 204
            +    +  +  N I P A + +T D+
Sbjct: 182 AARALGRYGVRANAICPRARTAMTADV 208

Length = 306

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  152 bits (387), Expect = 6e-46
 Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 18/195 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA+VTGA +G+G   AL LA+ GA VV+ DL  +         AA      ++  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDE---------AAAAAAEALQKA 51

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISD---TDWQLV 119
           GGKA+     V D + I   +  A+E FG +DI++NNAGI   +  A I D     W+ +
Sbjct: 52  GGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGI---QHVAPIEDFPTEKWKKM 108

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             + L GAF  ++AA P MK Q  GR++  AS  GL+G+ G+A Y +AK  L+GL+  ++
Sbjct: 109 IAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVA 168

Query: 180 IEGEKNNIHCNVIVP 194
           +EG  + +  N I P
Sbjct: 169 LEGATHGVTVNAICP 183

Length = 258

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  151 bits (383), Expect = 2e-45
 Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 11/194 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+VAIVTGA  G+GR+ A LLA+ GA VV+            + +AA  ++ EI+ +
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAY--------DINEEAAQELLEEIKEE 53

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG A+    + +S  D + +V+  +E FG+IDI++NNAGI        ++D +W  V DV
Sbjct: 54  GGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDV 113

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LTG   ++R A P+M K+  G +V  +S  GL+G   +  YSA+K A+   +  L+ E 
Sbjct: 114 NLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKEL 173

Query: 183 EKNNIHCNVIVPTA 196
             + I  N + P A
Sbjct: 174 APSGIRVNAVAPGA 187

Length = 247

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  150 bits (381), Expect = 3e-45
 Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 13/195 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +GRVA+VTGA  G+GR+ A+ LA  GA V+V D+ G           A      + + 
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD---------DAAATAELVEAA 53

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GGKA      V D   +   V   +E+FGR+DI++ NAGI     FA + D  W+ V DV
Sbjct: 54  GGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDV 113

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNFGQANYSAAKMALVGLSNTLSIE 181
           +LTG F +++AA P + +   GR+V+T+S +G  +G  G A+Y+A+K  LVG +  L++E
Sbjct: 114 NLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALE 173

Query: 182 GEKNNIHCNVIVPTA 196
               NI  N + P  
Sbjct: 174 LAARNITVNSVHPGG 188

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  144 bits (365), Expect = 7e-43
 Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 16/195 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA+VTGA +G+GR+ A  LA  GA VVV              +AA+ + A I+  
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVA-------ARRSEEEAAEALAAAIKEA 54

Query: 66  GGKAVPNY-----NSVVDGDKIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLV 119
           GG           +     + +V  A E FGRIDI++NNAGI   D     +++ DW  V
Sbjct: 55  GGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRV 114

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            DV+L GAF ++RAA P MKKQ   R+V  +S +GL G  GQA Y+A+K AL+GL+  L+
Sbjct: 115 IDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGLGGPPGQAAYAASKAALIGLTKALA 171

Query: 180 IEGEKNNIHCNVIVP 194
           +E     I  N + P
Sbjct: 172 LELAPRGIRVNAVAP 186

Length = 251

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  137 bits (347), Expect = 5e-40
 Identities = 72/192 (37%), Positives = 102/192 (53%), Gaps = 18/192 (9%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+ A+VTGA +G+G + A  LA  GA+VVVND G +          A+         GG 
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEE---------GAEAAAKVAGDAGGS 51

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISD---TDWQLVQDV 122
            +     V   D+I   +  A   FG +DI++NNAGI   +  A I +    DW  +  V
Sbjct: 52  VIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGI---QHVAPIEEFPPEDWDRIIAV 108

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
            LT AF   RAA PHMKKQ +GR++  AS  GL+ +  ++ Y AAK  L+GL+  L++E 
Sbjct: 109 MLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEV 168

Query: 183 EKNNIHCNVIVP 194
            ++ I  N I P
Sbjct: 169 AEHGITVNAICP 180

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  133 bits (337), Expect = 9e-39
 Identities = 70/193 (36%), Positives = 118/193 (61%), Gaps = 11/193 (5%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           V+ +G+VAIVTG   G+G++  + LA+ GA VV+N           S +AA+ +V E+  
Sbjct: 2   VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINY--------NSSKEAAENLVNELGK 53

Query: 65  KGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           +G        + + V D +++V+ A+ +FG++DI++NNAGI RD++F +++  DW+ V D
Sbjct: 54  EGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVID 113

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+L+  F  + A  P++ +   GR++  +S  G  G FGQ NYSAAK  ++G + +L++E
Sbjct: 114 VNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALE 173

Query: 182 GEKNNIHCNVIVP 194
             K N+  N I P
Sbjct: 174 LAKTNVTVNAICP 186

Length = 247

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  133 bits (336), Expect = 2e-38
 Identities = 86/221 (38%), Positives = 118/221 (53%), Gaps = 15/221 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D R  ++TG   GLGR+ A+ LA  GA V+V D+   R         AD V A I + GG
Sbjct: 5   DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMR-----GRAEADAVAAGIEAAGG 59

Query: 68  KAVPNYNSVVDGDKIVQTAL----ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           KA+     V D     + AL    E FGR+DI++NNAGI  D +FA +S  +W  V DV+
Sbjct: 60  KALGLAFDVRDFAA-TRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVN 118

Query: 124 LTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           L G F V++AA P M + +  GR+V  AS +G+ GN GQ NY+A+K  L+GL+ TL+ E 
Sbjct: 119 LDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANEL 178

Query: 183 EKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDPPVSFNR 223
               I  N + P A +    D   P  + +     PV   R
Sbjct: 179 APRGITVNAVAPGAINTPMADNAAPTEHLLN----PVPVQR 215

Length = 249

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  133 bits (336), Expect = 2e-38
 Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 13/191 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           +G+ A+VTGA +G+G+  AL LA  GA+V + DL             A+ V  EI   GG
Sbjct: 6   NGKTAVVTGAASGIGKEIALELARAGAAVAIADLN---------QDGANAVADEINKAGG 56

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           KA+     V + D +   +    E FG +DI+++NAGI         S  DW+ +Q +H+
Sbjct: 57  KAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHV 116

Query: 125 TGAFRVSRAAWPHMKK-QNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
            GAF  ++AA  HM K    G ++   S      +  ++ Y  AK  L+GL+  L+ EG 
Sbjct: 117 DGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGA 176

Query: 184 KNNIHCNVIVP 194
           K+N+  +V+ P
Sbjct: 177 KHNVRSHVVCP 187

Length = 262

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 9e-36
 Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSK 65
            DG   +VTG  +G+GR+ A   AE GA V V D+         S  A     A +  +K
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV---------SEAALAATAARLPGAK 59

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHL 124
               V +       +++  TA+E FG +D+++NNAGI         I+   W+    V+L
Sbjct: 60  VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNL 119

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMT-ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
            G F  +RAA P +K   +G +++  +S +G LG  G+  Y+A+K A+VGL  +L+IE  
Sbjct: 120 NGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG 179

Query: 184 KNNIHCNVIVPTA 196
              I  N I+P  
Sbjct: 180 PLGIRVNAILPGI 192

Length = 264

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  125 bits (316), Expect = 1e-35
 Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 5/185 (2%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           ++A+VTGA  G+G + A  L   G  V+     G        +K           +    
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG-----NDCAKDWFEEYGFTEDQVRLK 57

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
             +     +  + +    E  G +DI++NNAGI RD  F R+S  +W  V + +L   F 
Sbjct: 58  ELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFN 117

Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
           V++  +  M +Q YGR++  +S +GL G FGQ NYSAAK  ++G +  L+ EG +  I  
Sbjct: 118 VTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITV 177

Query: 190 NVIVP 194
           N I P
Sbjct: 178 NCIAP 182

Length = 245

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  124 bits (315), Expect = 3e-35
 Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 15/203 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R +G+VAIVTGA +G+G   A   A  GA VVV D            +AA+ V AEI + 
Sbjct: 2   RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE---------EAAERVAAEILA- 51

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQD 121
           GG+A+     V D       V  ALE FG +DI++NNAG   R+     + + ++  +  
Sbjct: 52  GGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFA 111

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V++   +  ++AA P M+ +  G +V  AS +GL    G   Y+A+K A++ L+  L+ E
Sbjct: 112 VNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAE 171

Query: 182 GEKNNIHCNVIVPTA-ASRLTED 203
              + I  N + P    + L E 
Sbjct: 172 LGPDKIRVNAVAPVVVETGLLEA 194

Length = 251

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 4e-35
 Identities = 70/199 (35%), Positives = 102/199 (51%), Gaps = 24/199 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R +G+VAI+TGA +G+GR+ A L A  GA VVV           +     D +VAEIR++
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVG---------ARRQAELDQLVAEIRAE 53

Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDW 116
           GG+AV      + GD         +V  A+E FG +DI  NNAG L +    A +S   W
Sbjct: 54  GGEAV-----ALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGW 108

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLS 175
           +     +LT AF  ++   P M  +  G L+ T++  G    F G A Y+A+K  L+GL+
Sbjct: 109 RETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLT 168

Query: 176 NTLSIEGEKNNIHCNVIVP 194
             L+ E     I  N ++P
Sbjct: 169 QVLAAEYGAQGIRVNALLP 187

Length = 254

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  123 bits (311), Expect = 8e-35
 Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 12/193 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+VTGA +G+G++ A+ LA  GA+VVVN    +         AA+ VV EI++ GG
Sbjct: 2   KGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKE--------DAAEEVVEEIKAVGG 53

Query: 68  KAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           KA+     V   +    + Q+A++ FG +DI++NNAG+  D S   ++  DW  V DV+L
Sbjct: 54  KAIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNL 113

Query: 125 TGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           TG F  +R A    +K    G+++  +S    +   G  NY+A+K  +  ++ TL+ E  
Sbjct: 114 TGQFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYA 173

Query: 184 KNNIHCNVIVPTA 196
              I  N I P A
Sbjct: 174 PKGIRVNAIAPGA 186

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  123 bits (310), Expect = 1e-34
 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 13/189 (6%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+VTGA  G+GR+ A  LA  GASVVVN           S  AA+ VVAEI + GGK
Sbjct: 3   GKVALVTGASRGIGRAIAKRLARDGASVVVNYAS--------SKAAAEEVVAEIEAAGGK 54

Query: 69  AV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A+    + +      ++   A + FG +DI++NNAG++  K  A  S+ ++  +  V+  
Sbjct: 55  AIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTK 114

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           GAF V + A   ++    GR++  +S+           Y+ +K A+   +  L+ E    
Sbjct: 115 GAFFVLQEAAKRLRDG--GRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGR 172

Query: 186 NIHCNVIVP 194
            I  N + P
Sbjct: 173 GITVNAVAP 181

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 7e-34
 Identities = 72/207 (34%), Positives = 99/207 (47%), Gaps = 24/207 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RFD +VAIVTGA  G+G++YA  LA  GASVVV D+  +          A+ V  +I + 
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAE---------GAERVAKQIVAD 53

Query: 66  GGKAVPNYNSVVDGDK---IVQTALENFGRIDIVINNAGILRDKSFARISDTDW---QLV 119
           GG A+     V D D    +    +  FG ID ++NNA I        +    W   +  
Sbjct: 54  GGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKF 113

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQANYSAAKMALVGLSNTL 178
             V+L GA   +RA + HM K+  G +V  +S +  L  NF    Y  AK+ L GL+  L
Sbjct: 114 MSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNF----YGLAKVGLNGLTQQL 169

Query: 179 SIEGEKNNIHCNVIVP----TAASRLT 201
           + E    NI  N I P    T A+R  
Sbjct: 170 ARELGGMNIRVNAIAPGPIDTEATRTV 196

Length = 250

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  120 bits (303), Expect = 1e-33
 Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 13/189 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG-QRDGDGKSSKAA---DTVVAEIRSK 65
           R+A+VTG   G+G +    LA+ G  V  N     +R       + A   D  V E    
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGD-- 58

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V ++ S       V       G ID+++NNAGI RD +F +++   W  V D +L 
Sbjct: 59  ----VSSFESCKAA---VAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLN 111

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             F V++     M+++ +GR++  +S +G  G FGQ NYSAAK  ++G +  L+ EG   
Sbjct: 112 SVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATK 171

Query: 186 NIHCNVIVP 194
            +  N I P
Sbjct: 172 GVTVNTISP 180

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  120 bits (304), Expect = 1e-33
 Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 15/193 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA+VTG  +G+G + A L A +GA V + D    R  D     A           
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLD----RSEDVAEVAAQ--------LL 59

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG A      V D   +   V   +  FGRIDI++N+AG+        +S+ DW    D+
Sbjct: 60  GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDI 119

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L G+F +++A   HM     G++V  AS +G++       Y A+K  +VG++  L++E 
Sbjct: 120 NLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEW 179

Query: 183 EKNNIHCNVIVPT 195
               I  N I PT
Sbjct: 180 GPYGITVNAISPT 192

Length = 255

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  119 bits (301), Expect = 2e-33
 Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 12/189 (6%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+VTGA  G+G   A  LAE GA++V+N          ++ + A+     I  +G +
Sbjct: 5   GKVALVTGASRGIGFGIASGLAEAGANIVINS---------RNEEKAEEAQQLIEKEGVE 55

Query: 69  AVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A      V D +     V+   E+FG+IDI++NNAGI+R        + +W+ V DV+L 
Sbjct: 56  ATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLN 115

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G F VS+A   HM KQ +G+++   S    LG      Y+A+K  + GL+  L+ E  ++
Sbjct: 116 GVFFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARH 175

Query: 186 NIHCNVIVP 194
            I  N I P
Sbjct: 176 GIQVNAIAP 184

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  119 bits (301), Expect = 3e-33
 Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 8/197 (4%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAA----DTVVAEIR 63
           +G+VA +TGA  G GR++A+ LA  GA ++  DL            A     D     + 
Sbjct: 2   EGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVE 61

Query: 64  SKGGKAVPNYNSVVDGDK---IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           + G K +     V D  +   +V+  +E FGR+D+V+ NAG+L       +S+  W  V 
Sbjct: 62  ALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVL 121

Query: 121 DVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           D++LTG +R  +A  PHM ++ N G +++T+S +GL    G A+Y+AAK  LVGL+ TL+
Sbjct: 122 DINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTLA 181

Query: 180 IEGEKNNIHCNVIVPTA 196
            E  +  I  N I P +
Sbjct: 182 NELAEYGIRVNSIHPYS 198

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  119 bits (301), Expect = 3e-33
 Identities = 69/197 (35%), Positives = 97/197 (49%), Gaps = 15/197 (7%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
                G+VAIVTG   G+G + A  LAE GA V +            S+  A+    E+ 
Sbjct: 3   LFSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYN---------SAPRAEEKAEELA 53

Query: 64  SKGGKAVPNYNSVVDGDKIVQTAL----ENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
            K G     Y   V   + V+       ++FG+IDI+I NAGI   K     +   W  V
Sbjct: 54  KKYGVKTKAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKV 113

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNT 177
            DV+L G F  ++AA    KKQ  G L++TAS SG + N  Q  A Y+A+K A++ L+ +
Sbjct: 114 IDVNLNGVFNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKS 173

Query: 178 LSIEGEKNNIHCNVIVP 194
           L++E  K  I  N I P
Sbjct: 174 LAVEWAKYFIRVNSISP 190

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  124 bits (314), Expect = 7e-33
 Identities = 67/194 (34%), Positives = 94/194 (48%), Gaps = 14/194 (7%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA+VTGA  G+G++ A  LA  GA VV+ DL    D +     AA+   AE+    
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADL----DEE-----AAEAAAAEL-GGP 469

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            +A+     V D   +    + A   FG +DIV++NAGI         SD DW+   DV+
Sbjct: 470 DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVN 529

Query: 124 LTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
            TG F V+R A   MK Q   G +V  AS + +        Y AAK A + L   L++E 
Sbjct: 530 ATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALEL 589

Query: 183 EKNNIHCNVIVPTA 196
             + I  N + P A
Sbjct: 590 GPDGIRVNGVNPDA 603

Length = 681

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  118 bits (297), Expect = 1e-32
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 19/190 (10%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDG-KSSKAADTVVAEIRSKGGK 68
           +V ++TG  +G+G + AL LA +G  V+       R+ D  +S            +   +
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVI----ATARNPDKLESLGEL-------LNDNLE 49

Query: 69  AVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            +     +  S+      V+  +E FGRID+++NNAG          S  + + + +V++
Sbjct: 50  VLELDVTDEESI---KAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNV 106

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G  RV+RA  P M+KQ  GR+V  +S +GL+       Y A+K AL  LS +L +E   
Sbjct: 107 FGPLRVTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAP 166

Query: 185 NNIHCNVIVP 194
             I   +I P
Sbjct: 167 FGIKVTIIEP 176

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 1e-32
 Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 12/190 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+ A+VTGA  GLG ++A  LAE GA+V  ND           +  A  + A + + GG
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDG---------LAAEARELAAALEAAGG 56

Query: 68  KAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +        +    A    G +D ++NNAGI   KS   +    W  V +V++
Sbjct: 57  RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNV 116

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G F + RAA PH++    GR+V  AS++ L G      Y A+K A++G++ +L+ E   
Sbjct: 117 RGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGG 176

Query: 185 NNIHCNVIVP 194
             I  N I P
Sbjct: 177 RGITVNAIAP 186

Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 2e-32
 Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 19/191 (9%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVV---VNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           RV I TGA +GLGR+ AL  A  G  +    VN+ GG+              +  +R  G
Sbjct: 2   RVMI-TGAASGLGRAIALRWAREGWRLALADVNEEGGEE------------TLKLLREAG 48

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G        V D  ++    Q   E +G ID+++NNAG+     F  +S  DW     ++
Sbjct: 49  GDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAIN 108

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L G  +  +A  P  K+Q  GR+V  AS +GL+     ++Y+ AK  +V LS TL +E  
Sbjct: 109 LMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELA 168

Query: 184 KNNIHCNVIVP 194
            + I  +V+ P
Sbjct: 169 DDEIGVHVVCP 179

Length = 270

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 2e-32
 Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 14/193 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+ A++TGA  G+G   A + A  GA++++ D+          S   + +  E+  +
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDI----------SPEIEKLADELCGR 52

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +       V D       ++ A E  GRIDI++NNAG+ R  SF  +SD D     D+
Sbjct: 53  GHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDI 112

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++ G + V++A  P M  +  GR+VM +S +G ++ + G+  Y+  K A+VGL+ +L++E
Sbjct: 113 NIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVE 172

Query: 182 GEKNNIHCNVIVP 194
             ++ I  N I P
Sbjct: 173 YAQSGIRVNAICP 185

Length = 263

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  117 bits (294), Expect = 2e-32
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 6/195 (3%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTV---VAEIRSK 65
           G+VA VTGA  G+GR+ AL LA+ GA+VVV         +G +     T+     EI + 
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG+A+P    V D D++   V+  ++ FGR+DI++NNAG +            + L+Q V
Sbjct: 63  GGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRV 122

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L G + +S+AA PHM K   G ++  +    L    G   Y+A K  +  L+  L+ E 
Sbjct: 123 NLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAEL 182

Query: 183 EKNNIHCNVIVPTAA 197
            ++ I  N + P+ A
Sbjct: 183 RRHGIAVNSLWPSTA 197

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  117 bits (295), Expect = 3e-32
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 28/197 (14%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDG---------KSSKAADTVV 59
           G+VA+VT A +G+G + A  LA  GA V +      R+ +                  VV
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICA----RNRENLERAASELRAGGAGVLAVV 56

Query: 60  AEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           A++               D D++V+ A + FGR+DI++NNAG      FA ++D DW   
Sbjct: 57  ADLTDPE-----------DIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEA 105

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL--LGNFGQANYSAAKMALVGLSNT 177
            D+ L    R+ RA  P MK++ +GR+V  +S +      N   +N   A+  L+GL  T
Sbjct: 106 FDLKLLSVIRIVRAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSN--VARAGLIGLVKT 163

Query: 178 LSIEGEKNNIHCNVIVP 194
           LS E   + +  N ++P
Sbjct: 164 LSRELAPDGVTVNSVLP 180

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 1e-31
 Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 15/195 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  GRVAIVTGAG+G+GR+ A L A  GA VVV D    RD +      A+ V A I + 
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVAD----RDAEA-----AERVAAAIAA- 51

Query: 66  GGKAVPNYNSVVDGDKIVQTALEN----FGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           GG+A      V   +  V+  ++     +GR+D+++NNAG     +     + DW  V  
Sbjct: 52  GGRAFARQGDVGSAEA-VEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMR 110

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V++ G F  ++ A P M++Q  G +V TAS   L G  G+A Y A+K A+  L+  ++++
Sbjct: 111 VNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALD 170

Query: 182 GEKNNIHCNVIVPTA 196
              + I  N + P  
Sbjct: 171 HATDGIRVNAVAPGT 185

Length = 252

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  115 bits (289), Expect = 1e-31
 Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+ A++TGAG G+GR+ A+ LA+ G +V +           ++ +    V  E+ + G K
Sbjct: 7   GKNALITGAGRGIGRAVAIALAKEGVNVGLL---------ARTEENLKAVAEEVEAYGVK 57

Query: 69  A------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
                  V +Y  V      ++      G IDI+INNAGI +   F  +   +W+ +  V
Sbjct: 58  VVIATADVSDYEEV---TAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQV 114

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L G +  +RA  P M ++  G ++  +S +G  G    + YSA+K  ++GL+ +L  E 
Sbjct: 115 NLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEV 174

Query: 183 EKNNIHCNVIVP-TAASRLTED 203
            K+NI    + P T A+ +  D
Sbjct: 175 RKHNIRVTALTPSTVATDMAVD 196

Length = 239

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  113 bits (286), Expect = 4e-31
 Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 22/196 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+  ++TG  +G+G++ A  L + GA+V++           +S    +  V EI ++   
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIV---------ARSESKLEEAVEEIEAEANA 51

Query: 69  A----------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           +          + +Y  V   ++    A+E  G  D+V+N AGI     F  ++  +++ 
Sbjct: 52  SGQKVSYISADLSDYEEV---EQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFER 108

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
             DV+  G+  V+ A  P MK+Q  G +V  +S + L+G +G + Y  +K AL GL+ +L
Sbjct: 109 GMDVNYFGSLNVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESL 168

Query: 179 SIEGEKNNIHCNVIVP 194
             E +  NI  +V+ P
Sbjct: 169 RQELKPYNIRVSVVYP 184

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  113 bits (284), Expect = 1e-30
 Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 15/188 (7%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F G+   VTGA  G+G + AL   E GA V+  D    +    +      T V ++    
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFD----QAFLTQEDYPFATFVLDVSD-- 59

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             AV          ++ Q  L   G +D+++N AGILR  +   +SD DWQ    V+  G
Sbjct: 60  AAAV---------AQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGG 110

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AF + RA  P  ++Q  G +V   SN+  +   G A Y A+K AL  L+  + +E     
Sbjct: 111 AFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYG 170

Query: 187 IHCNVIVP 194
           + CNV+ P
Sbjct: 171 VRCNVVSP 178

Length = 252

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score =  112 bits (282), Expect = 1e-30
 Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 20/195 (10%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V ++TGA +G+GR+ AL  AERGA VV+           +S++A   +  E+R  GG+A
Sbjct: 1   QVVVITGASSGIGRATALAFAERGAKVVLA---------ARSAEALHELAREVRELGGEA 51

Query: 70  VPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDT---DWQLVQDVH 123
           +     V D     +   TA+E FGRID  +NNAG+     F R  D    +++ V DV+
Sbjct: 52  IAVVADVADAAQVERAADTAVERFGRIDTWVNNAGV---AVFGRFEDVTPEEFRRVFDVN 108

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
             G    + AA PH++++  G L+   S  G      QA YSA+K A+ G + +L  E  
Sbjct: 109 YLGHVYGTLAALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELA 168

Query: 184 KN--NIHCNVIVPTA 196
            +   I   ++ PTA
Sbjct: 169 HDGAPISVTLVQPTA 183

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 3e-30
 Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 14/190 (7%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+V I+TGA  G+GR+ A+ LA  GA +V+            +     ++  E+   GG+
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAAR---------NETRLASLAQELADHGGE 51

Query: 69  AVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDW-QLVQDVHL 124
           A+     V D +   ++++ A+  FG IDI++NNAGI     F  ++D    + V  V+ 
Sbjct: 52  ALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNY 111

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            GA   + AA PH+K  + G++V+ +S +GL G   ++ Y+A+K AL G  ++L IE   
Sbjct: 112 LGAVYCTHAALPHLKA-SRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELAD 170

Query: 185 NNIHCNVIVP 194
           + +   V+ P
Sbjct: 171 DGVAVTVVCP 180

Length = 263

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  112 bits (281), Expect = 3e-30
 Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 12/190 (6%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG 67
           G+VA+VTG+ +G+G   A  LA  GA++V+N  G         +   + V A + +K G 
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFG--------DAAEIEAVRAGLAAKHGV 53

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           K + +   +     I   V  A   FG +DI++NNAGI             W  +  ++L
Sbjct: 54  KVLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNL 113

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           +  F  +R A PHMKKQ +GR++  AS  GL+ +  ++ Y AAK  +VGL+  +++E   
Sbjct: 114 SAVFHTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAG 173

Query: 185 NNIHCNVIVP 194
             + CN I P
Sbjct: 174 TGVTCNAICP 183

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  110 bits (278), Expect = 7e-30
 Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 12/186 (6%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
            +VTGA  G+G + A  LAE GA V   D   ++            +VA++R  G     
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQ---------LLELVADLRRYGYPFAT 51

Query: 72  NYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
               V D    D++VQ     +G ID+++N AGILR  +   +SD DWQ    V+  G F
Sbjct: 52  YKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVF 111

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
            VS+A  P MK++  G +V   SN+  +   G A Y+A+K AL  L+  L +E     I 
Sbjct: 112 NVSQAVSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIR 171

Query: 189 CNVIVP 194
           CNV+ P
Sbjct: 172 CNVVSP 177

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  108 bits (272), Expect = 9e-30
 Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 23/181 (12%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
              ++TG   GLG + A  LA  GA  +V          G +  AA+ +VAE+ + G + 
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLV-----SRRGPAPGAAE-LVAELEALGAEV 54

Query: 70  VPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
                 V   D         ++       G +D V++NAG+L D     ++   ++ V  
Sbjct: 55  T-----VAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLA 109

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
             +TGA+ +        +  + G  V+ +S +G+LG+ GQANY+AA  AL  L+     E
Sbjct: 110 PKVTGAWNLHEL----TRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAE 165

Query: 182 G 182
           G
Sbjct: 166 G 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  110 bits (277), Expect = 9e-30
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 19/212 (8%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
            + +R DG+ AI+TGAGAG+G+  A+  A  GASVVV+D+         ++ AA+ VV E
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVDE 54

Query: 62  IRSKGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           I+  GG+A     +  S  +   +   AL   G++DI++NNAG    K F      D++ 
Sbjct: 55  IQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMA-DFRR 113

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
             ++++   F +S+   P M+K   G ++   S +    N    +Y+++K A   L   +
Sbjct: 114 AYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNM 173

Query: 179 SIEGEKNNIHCNVIVPTA------ASRLTEDI 204
           + +  + NI  N I P A       S +T +I
Sbjct: 174 AFDLGEKNIRVNGIAPGAILTDALKSVITPEI 205

Length = 255

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  110 bits (277), Expect = 1e-29
 Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 14/192 (7%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+VTG  +G+G + A  LA  GA+VVV D+           + A+ V AE    G +
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADI---------DPEIAEKV-AEAAQGGPR 50

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A+     V    ++    + A+  FG +DIV++NAGI      A  S  DW    D++LT
Sbjct: 51  ALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLT 110

Query: 126 GAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           G F VSR A+  MK Q   G +V  AS + +      A YSAAK A   L+  L++EG +
Sbjct: 111 GHFLVSREAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGE 170

Query: 185 NNIHCNVIVPTA 196
           + I  N + P A
Sbjct: 171 DGIRVNTVNPDA 182

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (277), Expect = 1e-29
 Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 27/202 (13%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             +V ++TG   GLGR+ A  LA++GA + + DL         + +  +  VAE  + G 
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL---------NQEKLEEAVAECGALGT 54

Query: 68  KA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD---------KSFARIS 112
           +       V +   V           E+FG+++ +INNAGILRD         K  +++S
Sbjct: 55  EVRGYAANVTDEEDVEAT---FAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMS 111

Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
              +Q V DV+LTG F   R A   M +     +++  S+    GN GQ NYSA+K  + 
Sbjct: 112 LEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTNYSASKAGVA 171

Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
            ++ T + E  +  I    I P
Sbjct: 172 AMTVTWAKELARYGIRVAAIAP 193

Length = 253

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  109 bits (273), Expect = 3e-29
 Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 9/186 (4%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           GR A+VTGA  G+G   A LL  +GA V ++         G   +  + + AE+  +   
Sbjct: 6   GRKALVTGASGGIGEEIARLLHAQGAIVGLH---------GTRVEKLEALAAELGERVKI 56

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
              N +   +   + Q A  +   +DI++NNAGI +D  F R+SD DW  V +V+LT  F
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATF 116

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
           R++R     M ++ YGR++   S  G+ GN GQANY A+K  ++G S +L+ E    N+ 
Sbjct: 117 RLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVT 176

Query: 189 CNVIVP 194
            N + P
Sbjct: 177 VNCVAP 182

Length = 245

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  108 bits (272), Expect = 4e-29
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA- 69
           + ++TG G+G+GR  AL  A+RGA VV+ D+         + K A+     +R  GGK  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDI---------NEKGAEETANNVRKAGGKVH 51

Query: 70  -----VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
                V     V    +  +   +  G + I+INNAG++  K    + D + +   +V+ 
Sbjct: 52  YYKCDVSKREEV---YEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNT 108

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE--- 181
              F  ++A  P M ++N+G +V  AS +GL+   G A+Y A+K A VG   +L +E   
Sbjct: 109 LAHFWTTKAFLPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKA 168

Query: 182 GEKNNIHCNVIVPT 195
             K  I   ++ P 
Sbjct: 169 YGKPGIKTTLVCPY 182

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  109 bits (273), Expect = 5e-29
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 13/195 (6%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           +    DG+VAIVTG   GLG+ YA+ LA+ GA +++   G             D     I
Sbjct: 9   DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN----------WDETRRLI 58

Query: 63  RSKGGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
             +G K      +       +K+V+ ALE FG+IDI++NNAG +R        D DW  V
Sbjct: 59  EKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAV 118

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            D++L   + +S+A    M KQ  G+++  AS     G      Y+A+K  + GL+   +
Sbjct: 119 MDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFA 178

Query: 180 IEGEKNNIHCNVIVP 194
            E    NI  N I P
Sbjct: 179 NELAAYNIQVNAIAP 193

Length = 258

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  108 bits (271), Expect = 6e-29
 Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 11/188 (5%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
           A+VTG   G+G++ AL LAERGA VV+N          KS  AA  V AEI   GGKAV 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYR--------KSKDAAAEVAAEIEELGGKAVV 52

Query: 72  NYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
               V     +        E FGR+D++++NA     +  + ++   W    + +L    
Sbjct: 53  VRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALV 112

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
             ++ A   M+++  GR+V  +S   +           AK AL  L   L++E     I 
Sbjct: 113 HCAQQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIR 172

Query: 189 CNVIVPTA 196
            N + P  
Sbjct: 173 VNAVSPGV 180

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  107 bits (269), Expect = 2e-28
 Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 12/190 (6%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +VAI+TGA  G+GR+ A  LA  G ++V+ DL  +         AA + + EI   G  
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEE--------AAKSTIQEISEAGYN 53

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           AV     V D D +   +  A+E FG  D+++NNAGI        I++ D + V  V++ 
Sbjct: 54  AVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVF 113

Query: 126 GAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           G     +AA    KK  + G+++  +S +G+ G      YSA+K A+ GL+ T + E   
Sbjct: 114 GVLFGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAP 173

Query: 185 NNIHCNVIVP 194
             I  N   P
Sbjct: 174 KGITVNAYAP 183

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  112 bits (281), Expect = 2e-28
 Identities = 71/205 (34%), Positives = 98/205 (47%), Gaps = 15/205 (7%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           MP++     RVA VTG   G+GR  A  LA  GA VV+ DL  +         AA+ V A
Sbjct: 406 MPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLE---------AAEAVAA 456

Query: 61  EIRSKGG--KAVPNYNSVVDGDKIVQT---ALENFGRIDIVINNAGILRDKSFARISDTD 115
           EI  + G  +AV     V D   +          +G +DIV+NNAGI     F   +  +
Sbjct: 457 EINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQE 516

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
           WQL  D+  TG F V+R A+  M++Q   G +V  AS + +      + YSAAK A   L
Sbjct: 517 WQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHL 576

Query: 175 SNTLSIEGEKNNIHCNVIVPTAASR 199
           +  L+ EG    I  N + P A  +
Sbjct: 577 ARCLAAEGGTYGIRVNTVNPDAVLQ 601

Length = 676

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  106 bits (267), Expect = 2e-28
 Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 13/201 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+VTGA +G+G + A  LA  GA+V +           +     + +  E+ ++GG
Sbjct: 2   QGKVALVTGASSGIGEATARALAAEGAAVAIA---------ARRVDRLEALADELEAEGG 52

Query: 68  KAVPNYNSVVD---GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           KA+     V D    D  V+  +E  GR+DI++NNAGI+          TDW  + D +L
Sbjct: 53  KALVLELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNL 112

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G    + AA PH   +N G +V  +S +G +     A Y+A K  +   S  L  E  +
Sbjct: 113 LGLMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTE 172

Query: 185 NNIHCNVIVP-TAASRLTEDI 204
             +   VI P T  + L + I
Sbjct: 173 RGVRVVVIEPGTVDTELRDHI 193

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (277), Expect = 2e-28
 Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 21/193 (10%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+VTGA  G+G + A +LA  GA VV  D+    +       A   V   +   GG
Sbjct: 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGE-------ALAAVANRV---GG 258

Query: 68  KAVPNYNSVVD------GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
            A+      +D        +I +   E  G +DIV++NAGI RDK+ A + +  W  V  
Sbjct: 259 TALA-----LDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLA 313

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+L    R++ A        + GR+V  +S SG+ GN GQ NY+A+K  ++GL   L+  
Sbjct: 314 VNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPL 373

Query: 182 GEKNNIHCNVIVP 194
             +  I  N + P
Sbjct: 374 LAERGITINAVAP 386

Length = 450

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  106 bits (266), Expect = 3e-28
 Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 16/192 (8%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+VAIVTGAGAG+G + A  LA  GA VVV D+ G          AA  VVA+I    
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGG---------AAQAVVAQI---A 48

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQDV 122
           G A+     V D  ++    + A+E FG +D+++NNAG +             W     +
Sbjct: 49  GGALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAI 108

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L G F   R A P M  +  G +V  +S +G  G+ G   Y A+K A+  L+ TL+ E 
Sbjct: 109 NLRGTFLCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAEL 168

Query: 183 EKNNIHCNVIVP 194
               I CN + P
Sbjct: 169 RHAGIRCNALAP 180

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  106 bits (266), Expect = 3e-28
 Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 13/209 (6%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            + AIVTG G G+G +     AE GA V V DL         + +AA+ V A+IR+KGG 
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL---------NREAAEKVAADIRAKGGN 53

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A      + D D +   V  A +  G +D+++NNAG  +   F +     W+ +  ++LT
Sbjct: 54  AQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLT 113

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           GA  +  A  P M ++  GR+V  AS++  +G+ G+A Y+A K  LV  S T++ E  ++
Sbjct: 114 GALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARH 173

Query: 186 NIHCNVIVPTAA-SRLTEDILPPGSYPVK 213
            I  NV+ P    + L +DI      P K
Sbjct: 174 GITVNVVCPGPTDTALLDDICGGAENPEK 202

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  106 bits (267), Expect = 3e-28
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 27/200 (13%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+V I+TGA +G+G   A  LA  GA +V++          +  +  + V +E    G
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLS---------ARREERLEEVKSECLELG 51

Query: 67  GKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
             +      VV  D        ++V+ AL+ FG +DI+INNAGI      +   DT   +
Sbjct: 52  APSP----HVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI---SMRSLFHDTSIDV 104

Query: 119 VQ---DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
            +   +V+  G   +++AA PH+ +++ G +V+ +S +G +G   +  Y+A+K AL G  
Sbjct: 105 DRKIMEVNYFGPVALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFF 164

Query: 176 NTLSIEGEKNNIHCNVIVPT 195
           ++L  E  + NI   V+ P 
Sbjct: 165 DSLRAELSEPNISVTVVCPG 184

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  105 bits (264), Expect = 9e-28
 Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 16/194 (8%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA++TGA +G+G + A  LAE GA VV   L  +R       +  + +  EI +   
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAKVV---LAARR------EERLEALADEIGAGAA 55

Query: 68  KAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            A+     +  +V   +  ++   E FGRIDI++NNAG+            DW  + D +
Sbjct: 56  LALALDVTDRAAV---EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTN 112

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G    +RA  P M ++  G ++   S +G     G A Y A K A+   S  L  E  
Sbjct: 113 VKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELA 172

Query: 184 KNNIHCNVIVPTAA 197
              I   VI P   
Sbjct: 173 GTGIRVTVISPGLV 186

Length = 246

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 2e-27
 Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 22/196 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  GRVA++TG G+G+G + A  LA  GA+VVV D+      D ++ KAA     E+   
Sbjct: 4   RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDI------DPEAGKAA---ADEV--- 51

Query: 66  GGKAVP-NYNSVVDGDKIVQTALENFGRIDIVINNAGIL--RDKSFARISDTD---WQLV 119
           GG  VP +       + +  TA E +G +DI  NNAGI    D S   I +T    WQ V
Sbjct: 52  GGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDS---ILNTGLDAWQRV 108

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-FGQANYSAAKMALVGLSNTL 178
           QDV+LT  +   +AA PHM +Q  G ++ TAS   ++G+   Q +Y+A+K  ++ +S  L
Sbjct: 109 QDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSREL 168

Query: 179 SIEGEKNNIHCNVIVP 194
            ++  +  I  N + P
Sbjct: 169 GVQFARQGIRVNALCP 184

Length = 255

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 3e-27
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 16/193 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADT-VVAEIRS 64
              G+V  +TG   GLGR+ A  LA RGA V +   G            AD   +  I  
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI-- 61

Query: 65  KGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
                      +VD     + V      FGR+D ++N AG     + A      W  +  
Sbjct: 62  ----------DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYG 111

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V++      S+AA P +     GR+V   + + L    G   Y+AAK  +  L+  L+ E
Sbjct: 112 VNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAE 171

Query: 182 GEKNNIHCNVIVP 194
                I  N ++P
Sbjct: 172 LLDRGITVNAVLP 184

Length = 239

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  103 bits (259), Expect = 3e-27
 Identities = 64/191 (33%), Positives = 103/191 (53%), Gaps = 11/191 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VAIVTG   GLG ++A LL   GA VV++D+    D +G++        AE+   
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDI---LDEEGQA------AAAELGDA 52

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                 +         +V TA E FGR+D+++NNAGIL   +    +  +W+ + D++LT
Sbjct: 53  ARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLT 112

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE--GE 183
           G F  +RA  P MK+   G ++  +S  GL+G+   A Y+A+K A+ GL+ + ++E   +
Sbjct: 113 GVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQ 172

Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 173 GYGIRVNSVHP 183

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 4e-27
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 21/202 (10%)

Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAAD--TVVA 60
           E     G+ A+VTG   GLG   A  L E GA VV++           + KA +     A
Sbjct: 6   ELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLS-----------ARKAEELEEAAA 54

Query: 61  EIRSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
            + + G  A+     V D   I    +  LE FG +DI++NNAG              W 
Sbjct: 55  HLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWD 114

Query: 118 LVQDVHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGN----FGQANYSAAKMALV 172
            V ++++ G F +S+A     M  + YGR++  AS +GL GN         Y+ +K A++
Sbjct: 115 KVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVI 174

Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
             +  L+ E   + I  N I P
Sbjct: 175 NFTRALAAEWGPHGIRVNAIAP 196

Length = 259

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 6e-27
 Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+VTG+  GLG   A  LA  GA V+VN         G+++   +  VA +R+ GG
Sbjct: 10  AGQVALVTGSARGLGFEIARALAGAGAHVLVN---------GRNAATLEAAVAALRAAGG 60

Query: 68  KAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            A      + D +             GR+DI++NN G    +  A + D   + + +  L
Sbjct: 61  AAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDL 120

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
                +SR A   MK+Q YGR++   S +G +   G A Y AAK  L GL   L+ E   
Sbjct: 121 VAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180

Query: 185 NNIHCNVIVP 194
           + I  N I P
Sbjct: 181 HGITSNAIAP 190

Length = 256

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  103 bits (258), Expect = 6e-27
 Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 22/206 (10%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+VTGA  GLG+  A+ LAE GA +V           G           ++ + G +
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIV-----------GAGRSEPSETQQQVEALGRR 53

Query: 69  AVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
            +    + + +     +V +A+E FG IDI++NNAGI+R       S+ DW  V +V+L 
Sbjct: 54  FLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLK 113

Query: 126 GAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
             F +++AA  H  KQ   G+++  AS     G     +Y+A+K A+ GL+  L+ E   
Sbjct: 114 SVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAA 173

Query: 185 NNIHCNVIVP-------TAASRLTED 203
             I+ N I P       T A R  ED
Sbjct: 174 KGINVNAIAPGYMATNNTQALRADED 199

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  102 bits (257), Expect = 8e-27
 Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 14/192 (7%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VAI+TG  +G+G + A LL ++GA V + D    R+ +  ++     +  ++++   + 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILD----RNENPGAAAELQAINPKVKATFVQC 56

Query: 70  -VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS--FARISDTDWQLVQDVHLTG 126
            V ++  +       + A+E FGR+DI+INNAGIL +KS  FA      W+   DV+LTG
Sbjct: 57  DVTSWEQLA---AAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTG 113

Query: 127 AFRVSRAAWPHMKKQNY---GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
               +  A  +M K      G +V   S +GL        YSA+K  +VG + +L+   E
Sbjct: 114 VINTTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLE 173

Query: 184 -KNNIHCNVIVP 194
            K  +  N I P
Sbjct: 174 YKTGVRVNAICP 185

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  102 bits (256), Expect = 1e-26
 Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 19/202 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VAI+TG  +G+G + A L A+ GA VV+ D+            A   V AE+   
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADI---------DDDAGQAVAAELGDP 51

Query: 66  GGKAVPNYNSV-VDGD--KIVQTALENFGRIDIVINNAGILRDKSFARISDT---DWQLV 119
               V  +  V V+ D    V TA+  FGR+DI+ NNAG+L    +  I +T   +++ V
Sbjct: 52  DISFV--HCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCY-SILETSLEEFERV 108

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            DV++ GAF  ++ A   M     G +V  AS +G++G  G   Y+A+K A++GL+ + +
Sbjct: 109 LDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAA 168

Query: 180 IEGEKNNIHCNVIVP-TAASRL 200
            E  ++ I  N + P   A+ L
Sbjct: 169 TELGEHGIRVNCVSPYGVATPL 190

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 1e-26
 Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 28/210 (13%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAAD---TVVAEIRS 64
            G++A+VTGA  G+G + A LLA++GA V+V            SS+  D    V   I +
Sbjct: 7   TGKIALVTGASRGIGEAIAKLLAQQGAHVIV------------SSRKLDGCQAVADAIVA 54

Query: 65  KGGKAVPNYNSVVDGDKIVQT---ALENFGRIDIVINNAGILRDKSFARISDTD---WQL 118
            GGKA      + + ++I        E  GR+DI++NNA    +  F  I DTD   +Q 
Sbjct: 55  AGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAA--NPYFGHILDTDLGAFQK 112

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
             DV++ G F +S  A   MK+Q  G +V  AS +G+     Q  YS  K A++ ++   
Sbjct: 113 TVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAF 172

Query: 179 SIEGEKNNIHCNVIVPTA-----ASRLTED 203
           + E     I  N ++P       AS L ++
Sbjct: 173 AKECAPFGIRVNALLPGLTDTKFASALFKN 202

Length = 252

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  101 bits (254), Expect = 2e-26
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 29/210 (13%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V +VTGA  GLG + A   A  GA VVVN          +S+++A+ V AE    G +A
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYY--------RSTESAEAVAAEA---GERA 49

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSF-----ARISDTDWQLVQD 121
           +     V D D++   ++ A  +FG +D ++NNA  L D  F           DW+  Q 
Sbjct: 50  IAIQADVRDRDQVQAMIEEAKNHFGPVDTIVNNA--LIDFPFDPDQRKTFDTIDWEDYQQ 107

Query: 122 ---VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
                + GA  + +A  P  K++  GR++   +N          +Y+ AK AL+G +  +
Sbjct: 108 QLEGAVKGALNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNM 167

Query: 179 SIEGEKNNIHCNVIVP-----TAASRLTED 203
           + E     I  N++       T AS  T  
Sbjct: 168 AKELGPYGITVNMVSGGLLKVTDASAATPK 197

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 3e-26
 Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 13/196 (6%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           + F G+VA+VTG  AG+GR+ AL  A  GA VVV D    RD  G      +  VA IR 
Sbjct: 3   MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVAD----RDAAG-----GEETVALIRE 53

Query: 65  KGGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQ 120
            GG+A+    +     +   +V+  +  +GR+D   NNAGI  ++   A  S+ ++  + 
Sbjct: 54  AGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIM 113

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            V++ G +   +   P M  Q  G +V TAS +GL      + Y+A+K A++GL+ + +I
Sbjct: 114 GVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAI 173

Query: 181 EGEKNNIHCNVIVPTA 196
           E  K  I  N + P  
Sbjct: 174 EYAKKGIRVNAVCPAV 189

Length = 253

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  101 bits (253), Expect = 3e-26
 Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 16/195 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R +G+VAIVTGAG+G G   A   A+ GA VV+ D+             A+ V A+I   
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINA---------DGAERVAADI--- 49

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQD 121
           G  A+     V     +   V+ AL  FGR+DI++NNAGI  R+K    + + ++  V  
Sbjct: 50  GEAAIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFA 109

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V++   +  ++A  PHM++Q  G ++  AS +GL    G   Y+A+K  +V  +  +++E
Sbjct: 110 VNVKSIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVE 169

Query: 182 GEKNNIHCNVIVPTA 196
               NI  N + P A
Sbjct: 170 LAPRNIRVNCLCPVA 184

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  101 bits (253), Expect = 4e-26
 Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 6/192 (3%)

Query: 8   DGRVAIVTGA-GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            G+V +VT A G G+G + A    E GA VV++D+  +R G+     AA+  +  + +  
Sbjct: 16  AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV- 74

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              V +  S    D ++  A+E  GR+D+++NNAG+        ++D +W  V DV LTG
Sbjct: 75  ---VCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTG 131

Query: 127 AFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
            FR +RAA  +M+ + + G +V  AS  G     GQA+Y+AAK  ++ L+   ++E  + 
Sbjct: 132 TFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEY 191

Query: 186 NIHCNVIVPTAA 197
            +  N + P+ A
Sbjct: 192 GVRINAVAPSIA 203

Length = 262

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  100 bits (251), Expect = 6e-26
 Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 13/183 (7%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
            IVTGA  G+GR+ A  L + GA+V+  DL        +          ++      AV 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLL--EYGDPLRLTPLDVAD--AAAV- 55

Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVS 131
                    ++    L   G ID ++N AG+LR  +   +S  DW+    V++TG F + 
Sbjct: 56  --------REVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLL 107

Query: 132 RAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNV 191
           +A  PHMK +  G +V  ASN+  +     A Y A+K AL  LS  L +E     + CNV
Sbjct: 108 QAVAPHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNV 167

Query: 192 IVP 194
           + P
Sbjct: 168 VSP 170

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 6e-26
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 12/190 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G++A++TGA  G+G + A   A+ GA++V ND+         + +  D  +A  R  G 
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGATIVFNDI---------NQELVDKGLAAYRELGI 59

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A      V D D +   V    +  G IDI++NNAGI++      +S  D++ V D+ L
Sbjct: 60  EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDL 119

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
              F VS+A  P M K+ +G+++   S    LG    + Y+AAK  L  L+  ++ E  +
Sbjct: 120 NAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGE 179

Query: 185 NNIHCNVIVP 194
            NI CN I P
Sbjct: 180 ANIQCNGIGP 189

Length = 265

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 7e-26
 Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 13/198 (6%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+    DG+VA VTGAG+G+G+  A+ LA+ GA V + DL   R  DG +          
Sbjct: 1   PQLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDL---RTDDGLAE-----TAEH 52

Query: 62  IRSKGGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           I + G +A+    +  S  D    V       G + + +N AGI        + +  WQ 
Sbjct: 53  IEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQT 112

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--QANYSAAKMALVGLSN 176
           V D++LTG F   +A    M +   G +V  AS SG++ N G  QA+Y+A+K  ++ LS 
Sbjct: 113 VMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSK 172

Query: 177 TLSIEGEKNNIHCNVIVP 194
           +L++E     I  N I P
Sbjct: 173 SLAMEWVGRGIRVNSISP 190

Length = 254

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 7e-26
 Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 18/194 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+V +V+G G GLGR+ A+  A  GA VV+      R  +       D V AEI   G
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVL----AARTAE-----RLDEVAAEIDDLG 53

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTD---WQLVQ 120
            +A+     + D D+    V  ALE FGR+D ++NNA   R  S   ++D D   W+ V 
Sbjct: 54  RRALAVPTDITDEDQCANLVALALERFGRVDALVNNA--FRVPSMKPLADADFAHWRAVI 111

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           ++++ G  R+++A  P + +   G +VM  S            Y  AK AL+  S +L+ 
Sbjct: 112 ELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLAT 170

Query: 181 EGEKNNIHCNVIVP 194
           E     I  N + P
Sbjct: 171 ELGPQGIRVNSVAP 184

Length = 258

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 8e-26
 Identities = 69/229 (30%), Positives = 94/229 (41%), Gaps = 38/229 (16%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+VTGA  G+G + A   A  GA+V + DL             A+   A I   
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL---------AERAAAAIARD 54

Query: 66  --GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFA---RISDTDWQ 117
             G + +     V D   +   V  A E FG +D+++NNAGI     FA    ++D DW+
Sbjct: 55  VAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI---NVFADPLAMTDEDWR 111

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
               V L GA+   RA  P M ++  G +V  AS        G   Y  AK  L+GL+  
Sbjct: 112 RCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRA 171

Query: 178 LSIEGEKNNIHCNVIV------------------PTAASRLTEDILPPG 208
           L IE    N+  N I                   P AA   T  + P  
Sbjct: 172 LGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMK 220

Length = 260

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 99.8 bits (249), Expect = 9e-26
 Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 13/189 (6%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +VAIVTGA  G+G + A  LA  G +V VN  G        S+ AAD +VAEI + GG+
Sbjct: 5   NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG--------SAAAADELVAEIEAAGGR 56

Query: 69  AVPNYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A+     V D     ++   A   FGRID+++NNAG++   + A     D+      +L 
Sbjct: 57  AIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLR 116

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           GAF V R A  H+     GR++  +++   L   G   Y+A+K A+ GL + L+ E    
Sbjct: 117 GAFVVLREAARHLG--QGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGR 174

Query: 186 NIHCNVIVP 194
            I  N + P
Sbjct: 175 GITVNAVAP 183

Length = 245

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 99.4 bits (248), Expect = 1e-25
 Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 19/206 (9%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGA  G+G   A  LA  G  V +    G R+ +         + A   S G   
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSL----GLRNPED--------LAALSASGGDVE 48

Query: 70  VPNY--NSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
              Y      D   +V    + FGRID++++NAGI R  +    SD + +    +++   
Sbjct: 49  AVPYDARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAP 108

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
             ++RA  P +++   GR+V   S SG     G A YSA+K AL  L++ L  EG  + +
Sbjct: 109 AELTRALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGV 168

Query: 188 HCNVIVPTA-----ASRLTEDILPPG 208
             + + P       A  LT     P 
Sbjct: 169 RVSAVCPGFVDTPMAQGLTLVGAFPP 194

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 98.3 bits (245), Expect = 4e-25
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 16/188 (8%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           DG+VA++T A  G+GR+ AL  A  GA+V+  D+  ++  + +      T V ++  K  
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGITTRVLDVTDK-- 58

Query: 68  KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
                        + V    +  GRID++ N AG +   S     D DW    ++++   
Sbjct: 59  -------------EQVAALAKEEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSM 105

Query: 128 FRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           + + +A  P M  +  G ++  +S  S + G   +  YS  K A++GL+ +++ +  +  
Sbjct: 106 YLMIKAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQG 165

Query: 187 IHCNVIVP 194
           I CN I P
Sbjct: 166 IRCNAICP 173

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 98.3 bits (245), Expect = 6e-25
 Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 22/197 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+V ++TG   GLGR+ A+   +  A VV+N    + +        A+ V  EI+  GG+
Sbjct: 7   GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEE--------ANDVAEEIKKAGGE 58

Query: 69  AVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           A+      V GD         ++QTA++ FG +D++INNAGI        +S  DW  V 
Sbjct: 59  AI-----AVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVI 113

Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           + +LTGAF  SR A  +  + +  G ++  +S    +      +Y+A+K  +  ++ TL+
Sbjct: 114 NTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLA 173

Query: 180 IEGEKNNIHCNVIVPTA 196
           +E     I  N I P A
Sbjct: 174 MEYAPKGIRVNNIGPGA 190

Length = 261

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 98.0 bits (244), Expect = 6e-25
 Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 13/190 (6%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           VAIVTG  AG+G++ A  LA+ GASVV+ DL  +          A+ V A I+  GG+A+
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSE---------GAEAVAAAIQQAGGQAI 51

Query: 71  P---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFAR-ISDTDWQLVQDVHLTG 126
               N  S  D + +V+  +  FG I I++NNAG    K F   +++ D++    ++L  
Sbjct: 52  GLECNVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFS 111

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AFR+S+   PHM+K   G ++  +S S    N   A Y ++K A+  ++  L+ +     
Sbjct: 112 AFRLSQLCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKG 171

Query: 187 IHCNVIVPTA 196
           I  N + P A
Sbjct: 172 IRVNAVAPGA 181

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 6e-25
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 22/195 (11%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA++TG   G+G + A  L   G  V +           +  K  +   AE+ +KG
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAIT---------ARDQKELEEAAAELNNKG 54

Query: 67  G-----KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
                   V +   V    + V   +  FG +D++I NAG+        ++  +W+LV D
Sbjct: 55  NVLGLAADVRDEADV---QRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVID 111

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALVGLSNTLS 179
            +LTGAF   +AA P +K+   G ++  +S +G   NF  G A Y+A+K  LVG S    
Sbjct: 112 TNLTGAFYTIKAAVPALKRGG-GYIINISSLAGT--NFFAGGAAYNASKFGLVGFSEAAM 168

Query: 180 IEGEKNNIHCNVIVP 194
           ++  +  I  + I+P
Sbjct: 169 LDLRQYGIKVSTIMP 183

Length = 237

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 7e-25
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 21/195 (10%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +VA+V G G  LG      LAE G  V V D+  ++         A  V  EI ++ G+
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEK---------AANVAQEINAEYGE 52

Query: 69  A--------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
                      +  SV+    + +   E FGR+D+++ NAGI +          D+    
Sbjct: 53  GMAYGFGADATSEQSVL---ALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSL 109

Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            V+L G F  +R     M +    GR++   S SG +G+   + YSAAK   VGL+ +L+
Sbjct: 110 QVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLA 169

Query: 180 IEGEKNNIHCNVIVP 194
           ++  +  I  + ++ 
Sbjct: 170 LDLAEYGITVHSLML 184

Length = 259

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 98.0 bits (244), Expect = 8e-25
 Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 5/191 (2%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F  +V ++TG G+GLG + A+ LA+ GA + + DL    +G   +  A   +  +     
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDL--NEEGLEAAKAALLEIAPDAEVLL 58

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTD-WQLVQDVHLT 125
            KA  + +     +  V   +E FGRID   NNAGI   ++       D +  V  ++L 
Sbjct: 59  IKA--DVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLR 116

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G F         M++Q  G +V TAS  G+ G   Q+ Y+AAK  +VGL+   ++E  + 
Sbjct: 117 GVFYGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQY 176

Query: 186 NIHCNVIVPTA 196
            I  N I P A
Sbjct: 177 GIRINAIAPGA 187

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 97.5 bits (243), Expect = 9e-25
 Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 14/198 (7%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M +     G+  ++TG+  G+G   A  LAE GA +++ND+  +R         A+  VA
Sbjct: 1   MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER---------AELAVA 51

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALE----NFGRIDIVINNAGILRDKSFARISDTDW 116
           ++R +G KA     +V    + V+ A+E    + G ID++INNAGI R   F    + +W
Sbjct: 52  KLRQEGIKAHAAPFNVTHKQE-VEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEW 110

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             V  V+ T  F VS+A   +M K+  G+++   S    LG      Y+A+K A+  L+ 
Sbjct: 111 NDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTR 170

Query: 177 TLSIEGEKNNIHCNVIVP 194
            + +E  ++NI  N I P
Sbjct: 171 GMCVELARHNIQVNGIAP 188

Length = 254

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.0 bits (242), Expect = 1e-24
 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 22/191 (11%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F  +  ++TGA +G+G + A     +GA V   D   +       S     +  ++    
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK----PDLSGNFHFLQLDLSDD- 57

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLT 125
                           ++   +    +DI+ N AGIL D K     S  +WQ + D +LT
Sbjct: 58  ----------------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLT 101

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             F ++RA  P M ++  G ++   S +  +   G A Y+A+K AL G +  L+++  K+
Sbjct: 102 STFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKD 161

Query: 186 NIHCNVIVPTA 196
            I    I P A
Sbjct: 162 GIQVFGIAPGA 172

Length = 235

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 97.4 bits (243), Expect = 1e-24
 Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 16/191 (8%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
             VTGA +G+GR+ AL LA +GA + + D    RD DG         VA+ R+ GG  VP
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTD----RDADG-----LAQTVADARALGGT-VP 52

Query: 72  NYNS--VVDGDKIVQTALE---NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
            + +  + D D +   A +     G +D+V+N AGI    +  R++   W+ + DV+L G
Sbjct: 53  EHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMG 112

Query: 127 AFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
              V     P M      G LV  +S +GL+     A YSA+K  L GLS  L  +  ++
Sbjct: 113 PIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARH 172

Query: 186 NIHCNVIVPTA 196
            I  +V+VP A
Sbjct: 173 GIGVSVVVPGA 183

Length = 272

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 96.9 bits (242), Expect = 2e-24
 Identities = 59/179 (32%), Positives = 85/179 (47%), Gaps = 17/179 (9%)

Query: 14  VTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNY 73
           +TGA +G+GR+ ALL A  G  V   D     +  G        + AE+    G A    
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYD----INEAG-----LAALAAEL--GAGNAWTGA 54

Query: 74  NSVVDGDKIVQTALENF-----GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
             V D       AL +F     GR+D++ NNAGILR   F  I       V D+++ G  
Sbjct: 55  LDVTDRAA-WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVL 113

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
             + AA P++K     R++ T+S S + G  G A YSA K A+ GL+  L +E  ++ I
Sbjct: 114 NGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGI 172

Length = 260

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 97.7 bits (244), Expect = 3e-24
 Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 14/196 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               +V ++TGA AG+GR+ A   A RGA VV+      R  +G      + + AEIR+ 
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVVL----LARGEEG-----LEALAAEIRAA 55

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG+A+     V D +        A E  G ID  +NNA +     F  ++  +++ V +V
Sbjct: 56  GGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEV 115

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE- 181
              G    + AA  HM+ ++ G ++   S         Q+ Y AAK A+ G +++L  E 
Sbjct: 116 TYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCEL 175

Query: 182 -GEKNNIHCNVIVPTA 196
             + + +   ++ P A
Sbjct: 176 LHDGSPVSVTMVQPPA 191

Length = 334

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 96.5 bits (241), Expect = 3e-24
 Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 19/193 (9%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+ A++TGA +G+G   A  LA RG ++++           +     + +  E+  K G 
Sbjct: 6   GKTALITGASSGIGAELAKQLARRGYNLILV---------ARREDKLEALAKELEDKTGV 56

Query: 69  AVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD--- 121
            V     + +     +++     E  G ID+++NNAG      F    +      ++   
Sbjct: 57  EVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL---ELSLDEEEEMIQ 113

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +++    R+++A  P M ++  G ++   S +GL+     A YSA K  ++  S  L  E
Sbjct: 114 LNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREE 173

Query: 182 GEKNNIHCNVIVP 194
            +   +    + P
Sbjct: 174 LKGTGVKVTAVCP 186

Length = 265

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 96.4 bits (240), Expect = 4e-24
 Identities = 59/195 (30%), Positives = 106/195 (54%), Gaps = 19/195 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R + +VA++TGA  G+G++ A+ LA+ GA V+  D+          ++A    V +I+S 
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDI----------AEAVSETVDKIKSN 52

Query: 66  GGKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDTD---WQLV 119
           GGKA   +  + D  ++   A    E FGR+D++ NNAG+  D +  RI +     +  +
Sbjct: 53  GGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGV--DNAAGRIHEYPVDVFDKI 110

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             V + G F +++   P M +Q  G ++ T+S SG   +  ++ Y+AAK A++  + +++
Sbjct: 111 MAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIA 169

Query: 180 IEGEKNNIHCNVIVP 194
           IE  ++ I  N I P
Sbjct: 170 IEYGRDGIRANAIAP 184

Length = 272

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 95.2 bits (237), Expect = 7e-24
 Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 17/195 (8%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTG   G+G+  A  LA+ G +V V DL         + + A     EI   GGKA
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADL---------NEETAKETAKEINQAGGKA 51

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           V     V D D++   +  A E FG  D+++NNAG+        I++ + + V +V++ G
Sbjct: 52  VAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKG 111

Query: 127 AFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT----LSIE 181
                +AA    KKQ + G+++  AS +G  GN   + YS+ K A+ GL+ T    L+ +
Sbjct: 112 VLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPK 171

Query: 182 GEKNNIHCNVIVPTA 196
           G   N +C  IV T 
Sbjct: 172 GITVNAYCPGIVKTP 186

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 94.3 bits (235), Expect = 2e-23
 Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 12/191 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VAIVT + +G+G++ ALLLA++G  + +       D +G     A     E+RS G +A
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGIT---WHSDEEG-----AKETAEEVRSHGVRA 54

Query: 70  VP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                + + + +G + +   ++  GRID+++NNAG +    F  +   +W+ +  V + G
Sbjct: 55  EIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG 114

Query: 127 AFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           AF  S+ A  HM KQ   GR++   S        G + Y+AAK AL GL+  +++E  ++
Sbjct: 115 AFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEH 174

Query: 186 NIHCNVIVPTA 196
            I  N + P A
Sbjct: 175 GILVNAVAPGA 185

Length = 256

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 93.4 bits (232), Expect = 2e-23
 Identities = 68/187 (36%), Positives = 99/187 (52%), Gaps = 14/187 (7%)

Query: 13  IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPN 72
           +VTGA  G+GR+ A  LA  G  + V+   G+ D        A++VV+ I+++GG A   
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSD--------AESVVSAIQAQGGNARLL 53

Query: 73  YNSVVDGDKIVQTALE----NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
              V D     +T LE      G    V+ NAGI RD +F  +S+ DW +V   +L G +
Sbjct: 54  QFDVADRVA-CRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFY 112

Query: 129 RVSR-AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
            V      P ++ +  GR++  AS SG++GN GQ NYSAAK  L+G +  L++E  K  I
Sbjct: 113 NVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKI 172

Query: 188 HCNVIVP 194
             N I P
Sbjct: 173 TVNCIAP 179

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 93.5 bits (233), Expect = 4e-23
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 16/194 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+V  +TG   G+G + A  LA  GA V + DL    D        A    AE+   
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDL----DEA-----LAKETAAEL--- 49

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
            G  V     V D       +     + G ID+++NNAG++    F    D   + + DV
Sbjct: 50  -GLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDV 108

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++ G    S+ A P M  +  G +V  AS +G +   G A Y A+K A+VG ++   +E 
Sbjct: 109 NVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLEL 168

Query: 183 EKNNIHCNVIVPTA 196
               +H +V++P+ 
Sbjct: 169 RGTGVHVSVVLPSF 182

Length = 273

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 5e-23
 Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 28/201 (13%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G VA+VTG  +GLG +    L  +GA VV+ DL         +S      VA++      
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLP--------NSPGET--VAKLGDNCRF 51

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL-------RDKSFARISDTDWQLVQD 121
              +  S  D    +  A   FGR+DIV+N AGI        +        +  +Q V +
Sbjct: 52  VPVDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLE-LFQRVIN 110

Query: 122 VHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           V+L G F V R A   M K         G ++ TAS +   G  GQA YSA+K  +VG+ 
Sbjct: 111 VNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGM- 169

Query: 176 NTLSIEGE--KNNIHCNVIVP 194
            TL I  +     I    I P
Sbjct: 170 -TLPIARDLAPQGIRVVTIAP 189

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 92.7 bits (230), Expect = 6e-23
 Identities = 67/208 (32%), Positives = 102/208 (49%), Gaps = 22/208 (10%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+VAI+TG   GLG+  A+ LA+ GA +V           G     A    A++ + G
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIV-----------GVGVAEAPETQAQVEALG 54

Query: 67  GK---AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            K      +     D D IV  A+E  G IDI+INNAGI+R +      + DW  V +++
Sbjct: 55  RKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININ 114

Query: 124 LTGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
               F +S+A A   +K+ N G+++  AS     G     +Y+A+K A++GL+  L+ E 
Sbjct: 115 QKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATEL 174

Query: 183 EKNNIHCNVIVP-------TAASRLTED 203
            + NI+ N I P       TAA R    
Sbjct: 175 SQYNINVNAIAPGYMATDNTAALRADTA 202

Length = 251

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 91.4 bits (227), Expect = 2e-22
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 14/192 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G + A  L + G  V V   G +            T V E+R  G 
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEG---------LATTVKELREAGV 52

Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V  A+  +G ID+++NNAG     + A ++D  W  V + +L
Sbjct: 53  EADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNL 112

Query: 125 TGAFRVSRA--AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR++  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 113 TGVFRVTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 172

Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 173 ARTGITVNAVCP 184

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 91.6 bits (228), Expect = 2e-22
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 17/190 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG 67
            +V  +TGA  G GR++     ERG  VV       RD            +A++  K G 
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVV----ATARDTA---------TLADLAEKYGD 49

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           + +P    V D   +   V+TA+E+FGR+DIV+NNAG         +++++ +   D + 
Sbjct: 50  RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNF 109

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            GA  V++A  P++++Q  G ++  +S  G+        Y A+K AL G+S  L+ E  +
Sbjct: 110 FGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAE 169

Query: 185 NNIHCNVIVP 194
             I   ++ P
Sbjct: 170 FGIKVTLVEP 179

Length = 275

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 91.2 bits (226), Expect = 3e-22
 Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 13/192 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F GR A++TG  +G+G +     A RGA VV+ D+                 V  +R++G
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDV---------DKPGLRQAVNHLRAEG 54

Query: 67  GKAVPNYNSVVDGDKIVQTALENF---GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
                    V   +++   A E F   G +D+V +NAGI+       ++  DW+ V DV 
Sbjct: 55  FDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVD 114

Query: 124 LTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           L G+     A  P + +Q  G  +V TAS +GL+ N G   Y  AK  +VGL+ TL+ E 
Sbjct: 115 LWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREV 174

Query: 183 EKNNIHCNVIVP 194
             + I  +V+ P
Sbjct: 175 TADGIGVSVLCP 186

Length = 275

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 90.8 bits (226), Expect = 4e-22
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 23/198 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+ A++TG  +G+GR+ A+  A  GA V +N L  + D        A+     I  +
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEED-------DAEETKKLIEEE 75

Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDW 116
           G K +     ++ GD         +V+  ++ FG++DI++NNA      +S   I+    
Sbjct: 76  GRKCL-----LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQL 130

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +     ++   F +++AA PH+KK     ++ T S +   G+    +Y+A K A+V  + 
Sbjct: 131 EKTFRTNIFSMFYLTKAALPHLKKG--SSIINTTSVTAYKGSPHLLDYAATKGAIVAFTR 188

Query: 177 TLSIEGEKNNIHCNVIVP 194
            LS++  +  I  N + P
Sbjct: 189 GLSLQLAEKGIRVNAVAP 206

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 90.0 bits (224), Expect = 4e-22
 Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 12/190 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
             A++TGA +G+G++ AL  A+ G  + +  +   R  D     A + + AE+RS G KA
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLAL--VA--RSQD-----ALEALAAELRSTGVKA 57

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                 + + + I   +   LE FG  D++INNAG+        +  +DWQ V  ++LT 
Sbjct: 58  AAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTS 117

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F+   A  P M+ +  G ++  +S +          Y  +K AL   +  L+ E   + 
Sbjct: 118 VFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHG 177

Query: 187 IHCNVIVPTA 196
           I    I   A
Sbjct: 178 IRVCTITLGA 187

Length = 241

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 90.2 bits (224), Expect = 5e-22
 Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 14/202 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +G+ A+VTG   G+G +    LA  GA V             ++ K  D  + E R K
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTC---------ARNQKELDECLTEWREK 53

Query: 66  GGKA---VPNYNSVVDGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           G K    V + +S  +  +++ T   +F G+++I++NNAG    K     ++ D+ L+  
Sbjct: 54  GFKVEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMS 113

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
            +   A+ +SR A P +K    G +V  +S +G++     A Y A K AL  L+ +L+ E
Sbjct: 114 TNFEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACE 173

Query: 182 GEKNNIHCNVIVP-TAASRLTE 202
             K+NI  N + P   A+ L E
Sbjct: 174 WAKDNIRVNAVAPWVIATPLVE 195

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 90.1 bits (223), Expect = 6e-22
 Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 13/189 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R+A VTG   G+G S    L + G  VV         G G +S      + + ++ G   
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVA--------GCGPNSPRRVKWLEDQKALGFDF 55

Query: 70  VPNYNSVVDGDKIVQTALENF----GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           + +  +V D D   + A +      G ID+++NNAGI RD  F +++  DW  V D +LT
Sbjct: 56  IASEGNVGDWDS-TKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLT 114

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             F V++     M ++ +GR++  +S +G  G FGQ NYS AK  + G + +L+ E    
Sbjct: 115 SLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK 174

Query: 186 NIHCNVIVP 194
            +  N + P
Sbjct: 175 GVTVNTVSP 183

Length = 246

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 90.3 bits (225), Expect = 7e-22
 Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 44/222 (19%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
            +   G+   +TGA  G+G + AL  A  GA++V+       +   K      T   EI 
Sbjct: 1   MMSLSGKTLFITGASRGIGLAIALRAARDGANIVI--AAKTAEPHPKLPGTIHTAAEEIE 58

Query: 64  SKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTD---WQ 117
           + GG+A+P    V D D++   V  A+E FG IDI +NNA  +   +     DT    + 
Sbjct: 59  AAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAI---NLTGTEDTPMKRFD 115

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----------FGQ-ANYSA 166
           L+Q +++ G F VS+A  PH+KK         + N  +L            F     Y+ 
Sbjct: 116 LMQQINVRGTFLVSQACLPHLKK---------SENPHILTLSPPLNLDPKWFAPHTAYTM 166

Query: 167 AK--MALVGLSNTLSIEGE--KNNIHCNVIVP-----TAASR 199
           AK  M+L     TL +  E   + I  N + P     TAA R
Sbjct: 167 AKYGMSLC----TLGLAEEFRDDGIAVNALWPRTTIATAAVR 204

Length = 273

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 89.7 bits (223), Expect = 1e-21
 Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 26/190 (13%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL-GGQRDGDGKSSKAADTVVAEIRSKG 66
            G++ IVTG  +G+G +    L   GA+VV  D+ GG    +       D          
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTD---------- 57

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGI-----LRD----KSFARISDTDWQ 117
              V +   V   +  V   +E FGRID ++NNAGI     L D         +++  + 
Sbjct: 58  ---VSSAEEV---NHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFD 111

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
            + +++  G F +S+A    M KQ+ G +V  +S +GL G+ GQ+ Y+A K AL   + +
Sbjct: 112 KMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRS 171

Query: 178 LSIEGEKNNI 187
            + E  K+NI
Sbjct: 172 WAKELGKHNI 181

Length = 266

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 88.6 bits (220), Expect = 2e-21
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G+VA+VTG+  G+G++ AL LAE G  + VN          +S KAA+    EI + 
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYA--------RSRKAAEETAEEIEAL 52

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G KA+    +V D +KI        E FGR+D+ +NNA     +    + ++ W    ++
Sbjct: 53  GRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNI 112

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ-ANYSA---AKMALVGLSNTL 178
           +       ++ A   M+K   G+++  +S    LG+     NY+    +K AL  L+  L
Sbjct: 113 NAKALLFCAQEAAKLMEKVGGGKIISLSS----LGSIRYLENYTTVGVSKAALEALTRYL 168

Query: 179 SIEGEKNNIHCNVI 192
           ++E     I  N +
Sbjct: 169 AVELAPKGIAVNAV 182

Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 88.7 bits (220), Expect = 2e-21
 Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF+G+V +VTGA  G+GR  A  LA  GA V++ D           S+    V+AEI + 
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDR----------SELVHEVLAEILAA 50

Query: 66  GGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAG--ILRDKSFARISDTDWQLVQ 120
           G  A     +  +      +V+ A+E FGR+D++INN G  I   K +    +   +   
Sbjct: 51  GDAAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWA-KPYEHYEEEQIEAEI 109

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
              L       RA  PHM ++  G +V  +S +       +  YSAAK  +  L+ +L+ 
Sbjct: 110 RRSLFPTLWCCRAVLPHMLERQQGVIVNVSSIATRGIY--RIPYSAAKGGVNALTASLAF 167

Query: 181 EGEKNNIHCNVIVPTA 196
           E  ++ I  N + P  
Sbjct: 168 EHARDGIRVNAVAPGG 183

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 90.0 bits (224), Expect = 6e-21
 Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 24/183 (13%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+V ++TGA +G+GR+ A+ +AE GA+V +      R+G+     A D +VAEIR+KGG 
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFL----VARNGE-----ALDELVAEIRAKGGT 421

Query: 69  AVPNYNSVVDG---DKIVQTALENFGRIDIVINNAG--ILR--DKSFARISDTDWQLVQD 121
           A      + D    D  V+  L   G +D ++NNAG  I R  + S  R    D++    
Sbjct: 422 AHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFH--DYERTMA 479

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN---FGQANYSAAKMALVGLSNTL 178
           V+  GA R+     PHM+++ +G +V   S+ G+  N   F  + Y A+K AL   S+  
Sbjct: 480 VNYFGAVRLILGLLPHMRERRFGHVV-NVSSIGVQTNAPRF--SAYVASKAALDAFSDVA 536

Query: 179 SIE 181
           + E
Sbjct: 537 ASE 539

Length = 657

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 87.2 bits (216), Expect = 7e-21
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+VTG   GLG+  AL LAE G  +V           G +       + ++ + G +
Sbjct: 10  GKVAVVTGCDTGLGQGMALGLAEAGCDIV-----------GINIVEPTETIEQVTALGRR 58

Query: 69  AV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
            +    +   +     +++ A+  FG IDI++NNAG++R +     S+ DW  V ++++ 
Sbjct: 59  FLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIK 118

Query: 126 GAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
             F +S+AA  H   Q N G+++  AS     G     +Y+A+K  ++G++  ++ E  K
Sbjct: 119 SVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAK 178

Query: 185 NNIHCNVIVP-------TAASRLTED 203
           +NI+ N I P       T   R  E 
Sbjct: 179 HNINVNAIAPGYMATNNTQQLRADEQ 204

Length = 253

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 87.0 bits (216), Expect = 9e-21
 Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 32/206 (15%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            ++ ++TGA   +G+++   L   GA +++ D+            A + +  E+ +    
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADINA---------PALEQLKEELTNLYKN 52

Query: 69  A-------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGI---LRDKSFARISDTDWQL 118
                   + +  S+    +++++ LE FGRIDI+INNA     +    F       W  
Sbjct: 53  RVIALELDITSKESI---KELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNE 109

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG----NFGQAN------YSAAK 168
           V +V+L GAF  S+A     KKQ  G ++  AS  G++      +          YS  K
Sbjct: 110 VLNVNLGGAFLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIK 169

Query: 169 MALVGLSNTLSIEGEKNNIHCNVIVP 194
             ++ L+  L+       I  N I P
Sbjct: 170 AGIIHLTKYLAKYYADTGIRVNAISP 195

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 86.9 bits (216), Expect = 1e-20
 Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 22/209 (10%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-K 65
             G+VA +TG G G+G++ A   AE GASV +          G+  +  +    EI S  
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIA---------GRKPEVLEAAAEEISSAT 51

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG+A P    V D + +   V   L+ FG+IDI+INNA          +S   ++ V D+
Sbjct: 52  GGRAHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDI 111

Query: 123 HLTGAFRVSRAAWPH-MKKQNYGRLV-MTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            L G F  ++A     ++ ++ G ++ ++A+ +   G+  Q + +AAK  +  L+ +L++
Sbjct: 112 DLNGTFNTTKAVGKRLIEAKHGGSILNISATYAY-TGSPFQVHSAAAKAGVDALTRSLAV 170

Query: 181 EGEKNNIHCNVIVP------TAASRLTED 203
           E     I  N I P          RL   
Sbjct: 171 EWGPYGIRVNAIAPGPIPTTEGMERLAPS 199

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 24/202 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G+VA++TGA +G G ++A + A  G  +V+ D+  Q+D       A D  VAE+R++
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADV--QQD-------ALDRAVAELRAQ 53

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G + +     V D  ++      ALE FG + ++ NNAG+         S  DW+ V  V
Sbjct: 54  GAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGV 113

Query: 123 HLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +L G     RA  P M           G +V TAS +GLL       Y+ +K A+V L+ 
Sbjct: 114 NLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTE 173

Query: 177 T----LSIEGEKNNIHCNVIVP 194
           T    LS+  ++  +  +V+ P
Sbjct: 174 TLYQDLSLVTDQ--VGASVLCP 193

Length = 287

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 86.3 bits (214), Expect = 2e-20
 Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VAI+TG+ +G+G   A+L A  GA + +          G+ ++  +         G
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALT---------GRDAERLEETRQSCLQAG 51

Query: 67  GKAVPNYNSVV-------DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
                    VV         D+I+ T L  FGR+DI++NNAGIL           ++  V
Sbjct: 52  VSEKK-ILLVVADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKV 110

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            +++L     +++ A PH+ K   G +V  +S +G     G   Y  +K AL   +   +
Sbjct: 111 MNLNLRAVIYLTKLAVPHLIKTK-GEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTA 169

Query: 180 IEGEKNNIHCNVIVP 194
           +E     +  N + P
Sbjct: 170 LELAPKGVRVNSVSP 184

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 85.7 bits (212), Expect = 2e-20
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 16/195 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            R+ +VTGA  G+GR  AL  A  GA+V++          G++ +    V   I  +GG+
Sbjct: 4   DRIILVTGASDGIGREAALTYARYGATVILL---------GRNEEKLRQVADHINEEGGR 54

Query: 69  A----VPNYNSVV--DGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQD 121
                + +  +    +  ++ Q    N+ R+D V++NAG+L D    +  +   WQ V  
Sbjct: 55  QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQ 114

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V++   F +++A  P + K + G LV T+S+ G  G      Y+ +K A  GL   L+ E
Sbjct: 115 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADE 174

Query: 182 GEKNNIHCNVIVPTA 196
            ++ N+  N I P  
Sbjct: 175 YQQRNLRVNCINPGG 189

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 85.9 bits (213), Expect = 2e-20
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +VA+VTGAG G+G + A  L E G  V + D   +          A     ++   GGK
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEE---------TAQAAADKLSKDGGK 52

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A+     V D D++   V+  ++ FG +++V+NNAG+        I++  +  V ++++ 
Sbjct: 53  AIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVG 112

Query: 126 GAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT----LSI 180
           G     +AA    KK  + G+++   S +G++GN   A YS+ K A+ GL+ T    L+ 
Sbjct: 113 GVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLAS 172

Query: 181 EGEKNNIHCNVIVPT 195
           EG   N +   IV T
Sbjct: 173 EGITVNAYAPGIVKT 187

Length = 256

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 85.2 bits (211), Expect = 2e-20
 Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 20/201 (9%)

Query: 14  VTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNY 73
           +TGA +G+GR  ALL A  G  V + D     D DG ++     + AE+       V   
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYD----IDEDGLAA-----LAAEL--GAENVVAGA 53

Query: 74  NSVVDGDKIVQTALENF-----GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
             V D       AL +F     GR+D + NNAG+ R   F  +       + D+++ G  
Sbjct: 54  LDVTDRAAWAA-ALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVL 112

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
             + AA P++K     R++ TAS+S + G    A YSA K A+ GL+  L +E  ++ I 
Sbjct: 113 NGAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIR 172

Query: 189 CNVIVPTAASRLTEDILPPGS 209
              + P     +   IL  G 
Sbjct: 173 VADVWP---WFVDTPILTKGE 190

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 27/212 (12%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           MP      G+VA++TG G  LG + A  LA  GA V + D          + + A+ VVA
Sbjct: 2   MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDR---------NQEKAEAVVA 52

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAG---------------I 102
           EI++ GG+A+     V+D + + Q     LE+FG  DI+IN AG               I
Sbjct: 53  EIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELI 112

Query: 103 LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA 162
              K+F  + +  ++ V D++L G    ++     M  +  G ++  +S +         
Sbjct: 113 EPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVP 172

Query: 163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
            YSAAK A+   +  L++   K  I  N I P
Sbjct: 173 AYSAAKAAISNFTQWLAVHFAKVGIRVNAIAP 204

Length = 278

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 85.6 bits (212), Expect = 3e-20
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 19/208 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVV-----NDLGGQRD--GDGKSSKAADTV 58
           R DG+ A++TGA  G+G + A      GA V++     + L   RD   +    +    +
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 59  VAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
            A++     +             I+    +++  + I++NNAG    K+    ++ +W+ 
Sbjct: 66  AADVSDDEDR-----------RAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRG 114

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           + + +L  AF +SR A P +K+     +V   S SGL      A Y   K AL+ ++  L
Sbjct: 115 IFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNL 174

Query: 179 SIEGEKNNIHCNVIVPTAAS-RLTEDIL 205
           ++E  ++ I  N + P      LT   L
Sbjct: 175 AVEWAEDGIRVNAVAPWYIRTPLTSGPL 202

Length = 257

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 88.1 bits (219), Expect = 3e-20
 Identities = 61/185 (32%), Positives = 82/185 (44%), Gaps = 23/185 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G++ +VTGAG+G+GR  AL  A  GA VV +D+            AA+     IR+ 
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI---------DEAAAERTAELIRAA 362

Query: 66  GGKAVPNYNSVVDGDKIVQTALENF--------GRIDIVINNAGILRDKSFARISDTDWQ 117
           G  A      V D D     A+E F        G  DIV+NNAGI     F   S  DW 
Sbjct: 363 GAVAHAYRVDVSDAD-----AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWD 417

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
            V DV+L G     R     M ++   G +V  AS +    +     Y+ +K A++ LS 
Sbjct: 418 RVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSE 477

Query: 177 TLSIE 181
            L  E
Sbjct: 478 CLRAE 482

Length = 582

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 85.2 bits (211), Expect = 4e-20
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 16/196 (8%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M     F G+  +VTGA +G+GR+ A+ LA+RGA VV                  + +  
Sbjct: 1   MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           +               V  D  ++ AL   G  D ++N AGI   +S   ++   +  V 
Sbjct: 61  D---------------VGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVM 105

Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            V+  GA  V+R     M      G +V  +S + L+G      Y A+K AL  ++  L 
Sbjct: 106 AVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLC 165

Query: 180 IEGEKNNIHCNVIVPT 195
           +E   + I  N + PT
Sbjct: 166 VELGPHGIRVNSVNPT 181

Length = 245

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 85.1 bits (210), Expect = 5e-20
 Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 15/192 (7%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+ A++TGA  G+G+  AL   E GA V +           +   A + +  EI + GGK
Sbjct: 9   GKRALITGASTGIGKRVALAYVEAGAQVAIA---------ARHLDALEKLADEIGTSGGK 59

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
            VP    V    ++   +       G IDI + NAGI+       +   ++Q +Q+ ++T
Sbjct: 60  VVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVT 119

Query: 126 GAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSIEG 182
           G F  ++AA   M KQ   G ++ TAS SG + N  Q  ++Y A+K A++ L+  +++E 
Sbjct: 120 GVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVEL 179

Query: 183 EKNNIHCNVIVP 194
             + I  N + P
Sbjct: 180 APHKIRVNSVSP 191

Length = 253

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 7e-20
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF G+V +VTGA  G+GR  AL  A  GA VV+ D           S+    V AE+R+ 
Sbjct: 5   RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVD----------RSELVHEVAAELRAA 54

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINN-AGILRDKSFARISDTDWQLVQD 121
           GG+A+    +  +       +  A+E FGRID++INN  G +  K F    +   Q+  +
Sbjct: 55  GGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEE--QIEAE 112

Query: 122 VH--LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           +   L       RA  PHM  Q  G +V  +S +       +  YSAAK  +  L+ +L+
Sbjct: 113 IRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLA 170

Query: 180 IEGEKNNIHCNVIVP 194
            E  ++ I  N + P
Sbjct: 171 FEYAEHGIRVNAVAP 185

Length = 260

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.4 bits (209), Expect = 8e-20
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 24/194 (12%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +V +VTG+G G+GR+ A+ LA+ G+ VVVN      +         +  +  ++  GG+
Sbjct: 6   DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEM--------NETLKMVKENGGE 57

Query: 69  AVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +      V  D         + +  ++ +G  DI++NNAG+     F  + D       
Sbjct: 58  GI-----GVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHI 112

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
                     S+     M++   G +V  AS +G+   +G + Y A K A++ L+  L++
Sbjct: 113 STDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLAL 170

Query: 181 EGEKNNIHCNVIVP 194
           E     I  N I P
Sbjct: 171 E-LAPKIRVNAIAP 183

Length = 252

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 84.2 bits (209), Expect = 8e-20
 Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 28/201 (13%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            R+ +VTGAG G+GR  AL  A  GA+V++          G++ +  + V  EI + GG 
Sbjct: 12  DRIILVTGAGDGIGREAALTYARHGATVILL---------GRTEEKLEAVYDEIEAAGGP 62

Query: 69  A---VP---------NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDTD 115
               +P         NY       ++  T  E FGR+D V++NAG+L +     +     
Sbjct: 63  QPAIIPLDLLTATPQNY------QQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEV 116

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           WQ V  V++   F +++A  P + K     LV T+S+ G  G      Y+ +K A  G+ 
Sbjct: 117 WQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMM 176

Query: 176 NTLSIEGEKNNIHCNVIVPTA 196
             L+ E +  N+  N I P  
Sbjct: 177 QVLADEYQGTNLRVNCINPGG 197

Length = 247

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 84.4 bits (209), Expect = 8e-20
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +VA+V G G  LG      LAE G  V V D+  +      + K AD + AE   K   
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSE-----NAEKVADEINAEYGEKAYG 56

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
              +  +      + +   E F R+D+++ +AGI +          D+     V+L G F
Sbjct: 57  FGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYF 116

Query: 129 RVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
             +R     M +    GR++   S SG +G+   + YSAAK   VGL+ +L+++  ++ I
Sbjct: 117 LCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGI 176

Query: 188 HCNVIVP 194
             N ++ 
Sbjct: 177 TVNSLML 183

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 84.5 bits (209), Expect = 8e-20
 Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 17/192 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +VA+VT +  G+G + A  LA+ GA VVV+          +  +  D  VA ++ +G  
Sbjct: 10  NKVALVTASTDGIGLAIARRLAQDGAHVVVSS---------RKQQNVDRAVATLQGEGLS 60

Query: 69  ---AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTD---WQLVQDV 122
               V +     D +++V TA+   G +DI+++NA +  +  F  I D+    W  + DV
Sbjct: 61  VTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAV--NPFFGNILDSTEEVWDKILDV 118

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++     +++A  P M+K+  G +V+ +S +      G   Y+ +K AL+GL+  L+ E 
Sbjct: 119 NVKATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPEL 178

Query: 183 EKNNIHCNVIVP 194
              NI  N + P
Sbjct: 179 APRNIRVNCLAP 190

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 84.4 bits (209), Expect = 8e-20
 Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R D +VA+VTGAG GLG + AL  AE GA V++           ++    D V  +IR+ 
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIA---------ARTESQLDEVAEQIRAA 57

Query: 66  GGKAVPNYNSVVDGDK---IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +A      +   +    +   A+E FGR+DIV+NN G          S  D       
Sbjct: 58  GRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTF 117

Query: 123 HLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMAL 171
           ++  A  ++ AA P M +    G ++  +S  G L   G A Y  AK AL
Sbjct: 118 NVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAAL 167

Length = 263

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 16/187 (8%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA-EIRSKGGK 68
           +VA+VTGA +G+GR+ A  LA  G  V     G  R+    +      ++  ++      
Sbjct: 5   KVALVTGASSGIGRATAEKLARAGYRVF----GTSRNPARAAPIPGVELLELDVTDDA-- 58

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
                 SV      V   +   GRID+++NNAG+    +    S    Q + D ++ G  
Sbjct: 59  ------SV---QAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGIL 109

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
           R++RA  PHM+ Q  GR++  +S  G L     A Y+A+K A+ G S +L  E  +  I 
Sbjct: 110 RMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIR 169

Query: 189 CNVIVPT 195
            +++ P 
Sbjct: 170 VSLVEPA 176

Length = 270

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 24/195 (12%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA++TG  +G+GR+ A+L A+ GA + +  L      D   +K    V  E    G K
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYL--DEHEDANETKQR--VEKE----GVK 97

Query: 69  AVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLV 119
            +     ++ GD          V+  +   GR+DI++NNA      +S   I+       
Sbjct: 98  CL-----LIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKT 152

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
              ++   F +++AA PH+K+     ++ T S +G  GN    +YSA K A+   + +L+
Sbjct: 153 FKTNIYSYFHMTKAALPHLKQG--SAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLA 210

Query: 180 IEGEKNNIHCNVIVP 194
               +  I  N + P
Sbjct: 211 QSLVQKGIRVNAVAP 225

Length = 290

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 2e-19
 Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 15/188 (7%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A+VTGA  G+G++ A      G  V+  D     D       A       +     + 
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALD----IDAA-----ALAAFADAL--GDARF 51

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           VP    + D   +   +  A    G +D+++ NAG  R  S    +   W+    ++L  
Sbjct: 52  VPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEA 111

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           A+    A    M K++ G +V   S +G +   G   YSAAK  L+  +  L++E  +  
Sbjct: 112 AYLCVEAVLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFG 170

Query: 187 IHCNVIVP 194
           I  N + P
Sbjct: 171 IRANAVAP 178

Length = 257

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.3 bits (206), Expect = 2e-19
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 20/196 (10%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
            +RF G+VA++TG   G+GR+ A      GA V V       +     +K       E+R
Sbjct: 2   SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVL-----YNSAENEAK-------ELR 49

Query: 64  SKGGKA----VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
            KG       V N + V    ++V+   + FGR+D+++NNAGI+    F    +  +  +
Sbjct: 50  EKGVFTIKCDVGNRDQVKKSKEVVE---KEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKM 106

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNFGQANYSAAKMALVGLSNTL 178
             ++L GA   +    P +K    G +V  ASN+G+     G   Y+  K  ++ L+  L
Sbjct: 107 IKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRL 166

Query: 179 SIEGEKNNIHCNVIVP 194
           + E  K  I  N + P
Sbjct: 167 AFELGKYGIRVNAVAP 182

Length = 255

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 83.3 bits (206), Expect = 2e-19
 Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 24/209 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSK-AADTVVAEIRSKGG 67
           G++A+VTGA  G+GR  AL L E GA+V +          G++          EI ++GG
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYIT---------GRTILPQLPGTAEEIEARGG 53

Query: 68  KAVPNYNSVVDGDKI----VQTALENFGRIDIVINNA-------GILRDKSFARISDTDW 116
           K +P      D D++     + A E  GR+DI++NNA        +   K F     T W
Sbjct: 54  KCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIW 113

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             + +V L   +  S  A P M K   G +V+ +S  GL   F  A Y   K A+  ++ 
Sbjct: 114 DDINNVGLRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA-YGVGKAAIDRMAA 172

Query: 177 TLSIEGEKNNIHCNVIVPTAASRLTEDIL 205
            ++ E + + +    + P      TE +L
Sbjct: 173 DMAHELKPHGVAVVSLWPGFV--RTELVL 199

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 85.7 bits (212), Expect = 2e-19
 Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 20/193 (10%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            RV +VTGA  G+GR+     A  G  VVV D   +R                  S G  
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER------------ARERADSLGPD 52

Query: 69  AVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDT---DWQLVQDV 122
                  V D  +I +        FGRID+++NNAG+  D +     DT   ++  +Q +
Sbjct: 53  HHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVT-DPTMTATLDTTLEEFARLQAI 111

Query: 123 HLTGAFRVSRAAWPHMKKQNYGR-LVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +LTGA+ V+R A   M +Q +G  +V  AS +GL+    +  YSA+K A++ L+ +L+ E
Sbjct: 112 NLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACE 171

Query: 182 GEKNNIHCNVIVP 194
                I  N ++P
Sbjct: 172 WAAKGIRVNAVLP 184

Length = 520

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 82.9 bits (205), Expect = 3e-19
 Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 26/205 (12%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              +VA++TG    LG + A  LA+ GA V       ++          D V  EI + G
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEK---------GDKVAKEITALG 53

Query: 67  GKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAG--------------ILRDKSFA 109
           G+A+     V+D   + +     +  FG +DI+IN AG                 +++F 
Sbjct: 54  GRAIALAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFF 113

Query: 110 RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM 169
            + +  W+ V D++L G+F  S+     M +Q  G ++  +S +          YSAAK 
Sbjct: 114 DLDEEGWEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKA 173

Query: 170 ALVGLSNTLSIEGEKNNIHCNVIVP 194
           A+   +  L++E     +  N I P
Sbjct: 174 AVSNFTQWLAVEFATTGVRVNAIAP 198

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 9e-19
 Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 21/182 (11%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
            +   GRV +VTG   G+G   A      GA+VVV    G+R  +    + A+   A++R
Sbjct: 1   NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVV---CGRRAPETVDGRPAEFHAADVR 57

Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV- 122
                             +V   +E  GR+D+++NNAG      +A  ++   +  + + 
Sbjct: 58  DPD-----------QVAALVDAIVERHGRLDVLVNNAG---GSPYALAAEASPRFHEKIV 103

Query: 123 --HLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             +L     V++AA   M++Q   G +V   S SG   + G A Y AAK  L+ L+ +L+
Sbjct: 104 ELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLA 163

Query: 180 IE 181
           +E
Sbjct: 164 VE 165

Length = 252

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 24/189 (12%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAAD---- 56
            P      G+V +VTGA  G+G   A  L  RGA + + DL    +    ++ AA+    
Sbjct: 1   GPPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDL----EEAELAALAAELGGD 56

Query: 57  ----TVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARIS 112
               TVVA++                     + A+E FG ID+V+ NAGI    S A++ 
Sbjct: 57  DRVLTVVADVTDLAAMQ-----------AAAEEAVERFGGIDVVVANAGIASGGSVAQVD 105

Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
              ++ V DV+L G F   RA  P +  +  G ++  +S +      G A Y A+K  + 
Sbjct: 106 PDAFRRVIDVNLLGVFHTVRATLPAL-IERRGYVLQVSSLAAFAAAPGMAAYCASKAGVE 164

Query: 173 GLSNTLSIE 181
             +N L +E
Sbjct: 165 AFANALRLE 173

Length = 296

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 79.9 bits (197), Expect = 1e-18
 Identities = 31/103 (30%), Positives = 52/103 (50%)

Query: 92  RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS 151
           R D+V++NA IL D     ++ +  +     ++ G  R+  AA   MK +  GR ++ +S
Sbjct: 31  RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISS 90

Query: 152 NSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
            +GL G  G   Y+A+K AL GL+   + EG  N +    +  
Sbjct: 91  VAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVAC 133

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.5 bits (199), Expect = 2e-18
 Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 29/202 (14%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           ++   +  +VTG   GLG + A   A  GA VVVN          +S  AA+ +  E+  
Sbjct: 1   MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH--------QSEDAAEALADEL-- 50

Query: 65  KGGKAVPNYNSVVDGDKI---VQTALENFGR-IDIVINNAGILRDKSF---AR--ISDTD 115
            G +A+     V D +++     TA E+FG+ I  V+NNA  L D SF   AR    D  
Sbjct: 51  -GDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNA--LADFSFDGDARKKADDIT 107

Query: 116 WQLVQ---DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--FGQANYSAAKMA 170
           W+  Q   +  + GA    +AA P M++Q +GR++   +N  L  N      +Y+ AK A
Sbjct: 108 WEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTN--LFQNPVVPYHDYTTAKAA 165

Query: 171 LVGLSNTLSIEGEKNNIHCNVI 192
           L+GL+  L+ E     I  N++
Sbjct: 166 LLGLTRNLAAELGPYGITVNMV 187

Length = 253

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 80.0 bits (198), Expect = 2e-18
 Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 18/190 (9%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGA  G+G      LA+ G   V+  L   RD + +   A    V ++R++G   
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVI--LTA-RDVE-RGQAA----VEKLRAEGLSV 52

Query: 70  VPNYNSVVDGDKIVQTAL---ENFGRIDIVINNAGILRDKSFARISDTD--WQLVQDVHL 124
             +   V D   I   A    E +G +DI++NNAGI   K F   + T    +     + 
Sbjct: 53  RFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAF-KGFDDSTPTREQARETMKTNF 111

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G   V++A  P +KK   GR+V  +S  G L     + Y  +K AL  L+  L+ E ++
Sbjct: 112 FGTVDVTQALLPLLKKSPAGRIVNVSSGLGSL----TSAYGVSKAALNALTRILAKELKE 167

Query: 185 NNIHCNVIVP 194
             I  N   P
Sbjct: 168 TGIKVNACCP 177

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 12/174 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VA+VTG   GLG + A   AERGA+ +V          G++++  +   AE+ + 
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLV--------ICGRNAEKGEAQAAELEAL 54

Query: 66  GGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G KAV    + + V D  ++V  A E FGR+D ++N AG+    +    S   +     V
Sbjct: 55  GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAV 114

Query: 123 HLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           ++   F + + A   M+++   G +V   S S   G    A Y A+K AL  L+
Sbjct: 115 NVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLT 168

Length = 260

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 80.1 bits (198), Expect = 3e-18
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK--- 68
           A +TGA  GLGR+ A  +AE+GA V + D+              D   AEI +  G+   
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDA--------AGLDAFAAEINAAHGEGVA 53

Query: 69  --AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             AV +         ++  A +  G + +++NNAG+    +  +I   +W+ V  +++  
Sbjct: 54  FAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVES 113

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN- 185
            F   + A P+++      +V  +S +          Y+A+K A+  L+ +++++  +  
Sbjct: 114 IFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRG 173

Query: 186 -NIHCNVIVPT 195
            ++ CN I PT
Sbjct: 174 LDVRCNSIHPT 184

Length = 251

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 80.1 bits (198), Expect = 4e-18
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 10/190 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA++TGA +G+G + A      GA VV+ D+   R         A     EI   
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPAR---------ARLAALEIGPA 53

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                 +       D+IV  A+E FG IDI+ NNA +        IS   +  +  V++ 
Sbjct: 54  AIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVK 113

Query: 126 GAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           G F + +A   HM +Q  G +++  AS +G  G    ++Y A K A++  + + ++   +
Sbjct: 114 GLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIR 173

Query: 185 NNIHCNVIVP 194
           + I+ N I P
Sbjct: 174 HGINVNAIAP 183

Length = 257

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 80.0 bits (198), Expect = 4e-18
 Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 27/185 (14%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA++TG G+G+GR+        GA V V +   ++             +A +R + G
Sbjct: 5   HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK-------------LASLRQRFG 51

Query: 68  KAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ--- 120
             V     +  S  D  + V   ++ FG++D  + NAGI        + D   + +    
Sbjct: 52  DHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIW--DYNTSLVDIPAETLDTAF 109

Query: 121 ----DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
               +V++ G    ++AA P +K    G ++ T SNS      G   Y+A+K A+VGL  
Sbjct: 110 DEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVR 168

Query: 177 TLSIE 181
            L+ E
Sbjct: 169 QLAYE 173

Length = 263

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 79.9 bits (197), Expect = 5e-18
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 24/191 (12%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              +VAIVTG   G+G++    L E G++V+  D+      D    K             
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVD----------- 52

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTD---WQLVQDVH 123
              V N   V+ G   +   +  +GRIDI++NNAGI   +S+  I   +   W  + +V+
Sbjct: 53  ---VSNKEQVIKG---IDYVISKYGRIDILVNNAGI---ESYGAIHAVEEDEWDRIINVN 103

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G F +S+   P+M KQ+ G ++  AS          A Y  +K A++GL+ +++++  
Sbjct: 104 VNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVD-Y 162

Query: 184 KNNIHCNVIVP 194
              I C  + P
Sbjct: 163 APTIRCVAVCP 173

Length = 258

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 79.4 bits (196), Expect = 5e-18
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 20/195 (10%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V I+TGA  G+G + ALL AERG +V +N L        ++  AA+ VV  IR +GG+A
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYL--------RNRDAAEAVVQAIRRQGGEA 54

Query: 70  VPNYNSVVDGDKIV---QTALENFGRIDIVINNAGILRDKSFARISDTD---WQLVQDVH 123
           +     V D   ++   +      GR+D ++NNAGIL  +   R+   D      +   +
Sbjct: 55  LAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQ--MRLEQMDAARLTRIFATN 112

Query: 124 LTGAFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGNFGQ-ANYSAAKMALVGLSNTLS 179
           + G+F  +R A   M  ++ GR   +V  +S +  LG+ G+  +Y+A+K A+  ++  L+
Sbjct: 113 VVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLA 172

Query: 180 IEGEKNNIHCNVIVP 194
            E     I  N + P
Sbjct: 173 KEVAAEGIRVNAVRP 187

Length = 248

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 79.3 bits (196), Expect = 5e-18
 Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 15/200 (7%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
            ++TGA +G+GR+ A   A+ G +V    L  +R          D + AE+ +       
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVA---LAARRT------DRLDELKAELLNPNPSVEV 51

Query: 72  NYNSVVDGDKIVQTALENF----GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
               V D +   Q  +       G +D+VI NAG+ +  S   +S   ++   D +L GA
Sbjct: 52  EILDVTDEE-RNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGA 110

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
             +  AA P  + +  G LV+ +S + L G  G A YSA+K AL  L+ +L  + +K  I
Sbjct: 111 AAILEAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGI 170

Query: 188 HCNVIVPT-AASRLTEDILP 206
              VI P    + LT ++  
Sbjct: 171 RVTVINPGFIDTPLTANMFT 190

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 79.6 bits (197), Expect = 6e-18
 Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 23/212 (10%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +   G+ A+VTG   G+G +    L E GA VV       R       +  + V A
Sbjct: 1   MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTT----ARSRPDDLPEGVEFVAA 56

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS--FARISDTDWQL 118
           ++ +  G              + +  LE  G +DI+++  G     +  FA ++D +WQ 
Sbjct: 57  DLTTAEG-----------CAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQD 105

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ-ANYSAAKMALVGLSNT 177
             +++L  A R+ RA  P M  +  G ++   S    L        Y+AAK AL   S +
Sbjct: 106 ELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKS 165

Query: 178 LSIEGEKNNIHCNVIVP-----TAASRLTEDI 204
           LS E     +  N + P      AA  L E +
Sbjct: 166 LSKEVAPKGVRVNTVSPGWIETEAAVALAERL 197

Length = 260

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 8e-18
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 17/192 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VAIVTG    +G + A  L   GA V + D+                V A +   
Sbjct: 3   GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDAD---------NGAAVAASL--- 50

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +A      + D   I   V T +  FGR+DI++N A    D   A  S  DW    DV
Sbjct: 51  GERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS-SRADWLAALDV 109

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L  A  +++AA PH+ +   G +V   S S      G+  Y A+K A+  L+ +++++ 
Sbjct: 110 NLVSAAMLAQAAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDL 168

Query: 183 EKNNIHCNVIVP 194
             + I  N + P
Sbjct: 169 APDGIRVNSVSP 180

Length = 261

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 78.7 bits (194), Expect = 1e-17
 Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 28/209 (13%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +  +G+VA+VTGA +GLG  +A +LA+ GA VV   L  +R    K  +      A
Sbjct: 1   MGRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVV---LASRRVERLKELR------A 51

Query: 61  EIRSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           EI ++GG A      V D   I   V  A    G IDI++NN+G+   +    ++  D+ 
Sbjct: 52  EIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFD 111

Query: 118 LVQDVHLTGAFRVS---------RA-AWPHMKKQNYGRLVMTASNSGL--LGNFGQANYS 165
            V D +  GAF V+         RA    + K    GR++  AS +GL  L   G   Y 
Sbjct: 112 FVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPG--GRIINIASVAGLRVLPQIGL--YC 167

Query: 166 AAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
            +K A+V ++  +++E  ++ I+ N I P
Sbjct: 168 MSKAAVVHMTRAMALEWGRHGINVNAICP 196

Length = 258

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 38/209 (18%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+V ++TGA +G+G+  A  LA+RGA V++           ++ +  +   AEI+ + G 
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIA---------CRNEEKGEEAAAEIKKETGN 51

Query: 69  A--------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL-V 119
           A        + +  SV    +  +  L  F R+DI+INNAGI+      R++   ++L  
Sbjct: 52  AKVEVIQLDLSSLASV---RQFAEEFLARFPRLDILINNAGIMAPP--RRLTKDGFELQF 106

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN--------------YS 165
              +L G F ++    P +K     R+V  +S +   G     +              Y 
Sbjct: 107 AVNYL-GHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYG 165

Query: 166 AAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
            +K+A +  +  L+   E   +  N + P
Sbjct: 166 QSKLANILFTRELARRLEGTGVTVNALHP 194

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G V +VTG   G+GR+ A  LA R  + +V  L G+     +    A T+ A + + G 
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLV--LLGRSPLPPEEEWKAQTL-AALEALGA 260

Query: 68  KAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           +        +  D        ++++   E +G ID VI+ AG+LRD   A+ +  D++ V
Sbjct: 261 RV-----LYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAV 315

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
               + G   +++A       +     V+ +S S   G  GQA+Y+AA
Sbjct: 316 LAPKVDGLLNLAQAL----ADEPLDFFVLFSSVSAFFGGAGQADYAAA 359

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 77.5 bits (191), Expect = 3e-17
 Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D R A+V GA +G+G + A+ LA  G  V    LG +R       +  + +V +IR+ GG
Sbjct: 9   DRRPALVAGASSGIGAATAIELAAAGFPVA---LGARR------VEKCEELVDKIRADGG 59

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +AV     V D D +   V  A E  G I+++++ AG         IS   ++    +HL
Sbjct: 60  EAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHL 119

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            GA R++ A  P M ++  G L+   S+  L        Y AAK  L  +   L +E E 
Sbjct: 120 VGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEG 179

Query: 185 NNIHCNVIVP 194
             +  +++ P
Sbjct: 180 TGVRASIVHP 189

Length = 274

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 76.6 bits (189), Expect = 5e-17
 Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 22/219 (10%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G   ++TG  +G+G + A    E G +V++          G+  +       E+ +  
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIIT---------GRREERLAEAKKELPNIH 53

Query: 67  GKA--VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ--DV 122
                V +  SV     + +  L  +  +DI+INNAGI R       +    +     D 
Sbjct: 54  TIVLDVGDAESVE---ALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDT 110

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L G  R+ +A  PH+KKQ    +V  +S    +       Y A K AL   +  L  + 
Sbjct: 111 NLIGPIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQL 170

Query: 183 EKNNIHCNVIVPTA------ASRLTEDILPPGSYPVKGF 215
           +   +    IVP A        R   D   P   P+  F
Sbjct: 171 KDTGVEVVEIVPPAVDTELHEERRNPDGGTPRKMPLDEF 209

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 76.6 bits (189), Expect = 7e-17
 Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 25/186 (13%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G VA++TG G+GLGR+        GA V V D   ++             VAE+R+ 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK-------------VAELRAD 47

Query: 66  GGKAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGI------LRDKSFARISDTD 115
            G AV     +  S+ D ++ V   +E FG++D  I NAGI      L D    ++ +  
Sbjct: 48  FGDAVVGVEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAF 107

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
            +L   +++ G    ++AA P +     G ++ T SN+G     G   Y+A+K A+VGL 
Sbjct: 108 DELF-HINVKGYILGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLV 165

Query: 176 NTLSIE 181
             L+ E
Sbjct: 166 KQLAYE 171

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 76.5 bits (189), Expect = 8e-17
 Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 15/190 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             +  ++TG  +G GR+ A      G  VV             + ++             
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVG------------TVRSEAARADFEALHPD 50

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A+     V D D I   V  A   FG ID+++NNAG   + +       + +   +V++
Sbjct: 51  RALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNV 110

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            GA  +++A  P M+ +  G +V   S  GL+   G   Y  +K AL G+S +L+ E   
Sbjct: 111 FGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAP 170

Query: 185 NNIHCNVIVP 194
             IH   + P
Sbjct: 171 FGIHVTAVEP 180

Length = 277

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 76.8 bits (189), Expect = 8e-17
 Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 28/215 (13%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+VTG   G+G S   L  + GA V + DL  Q D                 S 
Sbjct: 15  RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL--QDDLGQNVCD----------SL 62

Query: 66  GGKAVPNY---NSVVDGD--KIVQTALENFGRIDIVINNAGILRDKSFARISD------T 114
           GG+    +   +  V+ D  + V   ++ FG +DI++NNAG+    +     D      +
Sbjct: 63  GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGL----TGPPCPDIRNVELS 118

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
           +++ V DV++ G F   + A   M     G +V   S +  +G  G   Y+ +K A++GL
Sbjct: 119 EFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGL 178

Query: 175 SNTLSIEGEKNNIHCNVIVPTA-ASRLTEDILPPG 208
           + +++ E  K+ I  N + P A  + L    LP  
Sbjct: 179 TRSVAAELGKHGIRVNCVSPYAVPTALALAHLPED 213

Length = 280

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 75.7 bits (186), Expect = 1e-16
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 14/174 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADT--VVAEIRSKG 66
           G+VAIVTG G G+G+   L   E G  VV  D+  +R  D   ++  +   V  ++  + 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADET 60

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                          +V   LE  GRID+++NNA        + +   +W  +  V+LTG
Sbjct: 61  LVKF-----------VVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTG 109

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            + +SR     + K   GR++  AS            Y+A+K  LV L++ L++
Sbjct: 110 PYELSRYCRDELIKNK-GRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAM 162

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 1e-16
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 14/191 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            GR A+VTG+  G+G + A  LA+ GA V++N         G+           ++ +G 
Sbjct: 9   TGRRALVTGSSQGIGYALAEGLAQAGAEVILN---------GRDPAKLAAAAESLKGQGL 59

Query: 68  KAVPNYNSVVDGDKIVQTALENF----GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            A      V D D  V+ A++ F    G IDI++NNAG+             ++ +   +
Sbjct: 60  SAHALAFDVTDHDA-VRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTN 118

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           ++  F V +A   HM  +  G+++  AS    L   G A Y+A K A+  L+  ++ +  
Sbjct: 119 ISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWA 178

Query: 184 KNNIHCNVIVP 194
           K+ + CN I P
Sbjct: 179 KHGLQCNAIAP 189

Length = 255

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 75.8 bits (187), Expect = 1e-16
 Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 9/175 (5%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVV--VNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            ++AIVTGA +G G    L LA++G  V+  + +   Q +   ++++       +++   
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLD 62

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              V + NS+ +   +++      GRID+++NNAG         I   +++   + ++ G
Sbjct: 63  ---VTDQNSIHNFQLVLKE----IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFG 115

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           A  V++A  P+M+KQ  G+++  +S SG +G  G + Y ++K AL G S +L +E
Sbjct: 116 AISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLE 170

Length = 280

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 18/181 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVV-----NDLGGQRDGDGKSSKAADTVVA 60
               +  ++TGA  G+G++ A  LA  GA +++       L           +    VVA
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRH-RWVVA 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           ++ S+             G + V       G I+++INNAG+              + + 
Sbjct: 61  DLTSE------------AGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLL 108

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            ++LT   +++RA  P ++ Q    +V   S  G +G  G A+Y A+K AL G S  L  
Sbjct: 109 ALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRR 168

Query: 181 E 181
           E
Sbjct: 169 E 169

Length = 263

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 73.7 bits (182), Expect = 2e-16
 Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 22/163 (13%)

Query: 13  IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPN 72
           +VTG   GLG   A  LAERGA  +V  L  +       ++A    +AE+ ++G +    
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLV--LLSRSGAPDPEAEAL---LAELEARGAEVT-- 56

Query: 73  YNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
              VV  D         ++     +   +  VI+ AG+LRD   A ++  D+  V    +
Sbjct: 57  ---VVACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKV 113

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           TGA+ +  A     + +     V+ +S +G+LG+ GQANY+AA
Sbjct: 114 TGAWNLHEAT----RDRPLDFFVLFSSIAGVLGSPGQANYAAA 152

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 73.2 bits (180), Expect = 7e-16
 Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGK-------SSKAADTVVAEI 62
           R  +VTGA  G+G + +L LA  G  V+        D  G+         +     +A+I
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQI 63

Query: 63  RSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
                                         +D ++NN GI   +   +I     Q V D+
Sbjct: 64  NEIHP-------------------------VDAIVNNVGIALPQPLGKIDLAALQDVYDL 98

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++  A +V++A    MK +  GR+V   S + + G   + +YSAAK ALVG + T ++E 
Sbjct: 99  NVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALEL 157

Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 158 AEYGITVNAVAP 169

Length = 234

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 72.7 bits (179), Expect = 1e-15
 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 23/181 (12%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            VA+VTGA   +GR+ A  LA  G  VVV+          +S   A  +  E+ +    A
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHY--------NRSEAEAQRLKDELNALRNSA 52

Query: 70  VPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           V     +V  D         +V  A   FGR D+++NNA         + S+  W  +  
Sbjct: 53  V-----LVQADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFG 107

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLV-MTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           ++L   + + +A    +     G ++ +  + +      G   Y  +K AL GL+ + ++
Sbjct: 108 INLKAPYLLIQAFARRLAGSRNGSIINIIDAMTD-RPLTGYFAYCMSKAALEGLTRSAAL 166

Query: 181 E 181
           E
Sbjct: 167 E 167

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 73.0 bits (179), Expect = 1e-15
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           +A+VTG   G+GR+ ALLLA+ G +V VN          ++  AA  VV  I   GGKA 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQ--------QNLHAAQEVVNLITQAGGKAF 54

Query: 71  PNYNSVVDGDKIV---QTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQDVHLTG 126
                + D +++V       ++   +  ++NNAGIL  +     ++      V   ++TG
Sbjct: 55  VLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTG 114

Query: 127 AFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGNFGQ-ANYSAAKMALVGLSNTLSIEG 182
            F   R A   M  ++ G    +V  +S +  LG  G+  +Y+A+K A+  L+  LS+E 
Sbjct: 115 YFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEV 174

Query: 183 EKNNIHCNVIVP 194
               I  N + P
Sbjct: 175 AAQGIRVNCVRP 186

Length = 247

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 72.5 bits (178), Expect = 1e-15
 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 9/183 (4%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
           A+VTGA  G+G + A LL   G  V +      RD             A+          
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGIC----ARDEAR-----LAAAAAQELEGVLGLAG 53

Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVS 131
           +     D  + V    E FG +D ++NNAG+   K    ++  +W+LV D +LTGAF   
Sbjct: 54  DVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCI 113

Query: 132 RAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNV 191
             A P + ++  G +V   S +G     G A Y+A+K  L+GLS    ++  + NI    
Sbjct: 114 HKAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVN 173

Query: 192 IVP 194
           ++P
Sbjct: 174 VMP 176

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 71.9 bits (176), Expect = 3e-15
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+ A++TG+  G+GR++A      GA V + D+         + +AA    AEI    
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADI---------NLEAARATAAEIGPAA 51

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                +       D+ V   ++ +G IDI++NNA +        I+   +  +  ++++G
Sbjct: 52  CAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSG 111

Query: 127 AFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
              + +A    M  Q   G+++  AS +G  G      Y A K A++ L+ +  +   ++
Sbjct: 112 TLFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH 171

Query: 186 NIHCNVIVP 194
            I+ N I P
Sbjct: 172 GINVNAIAP 180

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 70.2 bits (173), Expect = 4e-15
 Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 16/160 (10%)

Query: 13  IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPN 72
           ++TG   GLGR+ A  LAERGA  +V  L  +    G  +  A  ++AE+ + G +    
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLV--LLSRS---GPDAPGAAALLAELEAAGARVT-- 56

Query: 73  YNSVVDGDKI-----VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
             +    D+      +       G +  VI+ AG+L D   A ++   +  V      GA
Sbjct: 57  VVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGA 116

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           + +                V+ +S +G+LG+ GQANY+AA
Sbjct: 117 WNLHELT----ADLPLDFFVLFSSIAGVLGSPGQANYAAA 152

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 70.0 bits (171), Expect = 4e-15
 Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 13/116 (11%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           +++  G+VAIVTG G G+GR+ ALLLA++GA V+V D+      D +S +A    V EI 
Sbjct: 11  KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI------DQESGQAT---VEEIT 61

Query: 64  SKGGKAV-PNYNSVVDGD--KIVQTALENFGRIDIVINNAGILR-DKSFARISDTD 115
           + GG+A+  +Y+    GD  +++   L  F RID++  NAG+ + D  F+R  + D
Sbjct: 62  NLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND 117

Length = 169

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 71.3 bits (175), Expect = 5e-15
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 19/173 (10%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            VAIVTGA  G+GR+ A  LA RG  + +NDL    D D      A  VVAE+ + G +A
Sbjct: 2   PVAIVTGASRGIGRAIATELAARGFDIAINDL---PDDD-----QATEVVAEVLAAGRRA 53

Query: 70  V---PNYNSVVDGDKIVQTALENFGRIDIVINNAGI--LRDKSFARISDTDWQLVQDVHL 124
           +    +   + D + ++  A E+FGR+D ++NNAGI          +++  +  +  ++L
Sbjct: 54  IYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINL 113

Query: 125 TGAFRVSRAA------WPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMAL 171
            G F +++A        P      +  ++   S +  L +  +  Y  +K  L
Sbjct: 114 RGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGL 166

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 70.9 bits (174), Expect = 6e-15
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 31/152 (20%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAAD---------- 56
             G+   +TGA  G+G++ AL  A  GA+VV+            ++K A+          
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVI------------AAKTAEPHPKLPGTIY 48

Query: 57  TVVAEIRSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISD 113
           T   EI + GGKA+P    + D D++   V+ A+E FG IDI++NNA  +   S     D
Sbjct: 49  TAAEEIEAAGGKALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAI---SLTGTLD 105

Query: 114 TD---WQLVQDVHLTGAFRVSRAAWPHMKKQN 142
           T    + L+  V+  G +  S+A  P++KK  
Sbjct: 106 TPMKRYDLMMGVNTRGTYLCSKACLPYLKKSK 137

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 70.8 bits (173), Expect = 9e-15
 Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 21/198 (10%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VA+VTGA  G+GR+ A+ LA  GA V ++         G++ +AAD  + EI S G
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIH--------YGRNKQAADETIREIESNG 55

Query: 67  GKAV---PNYNSVVDGDKIVQTALEN-------FGRIDIVINNAGILRDKSFARISDTDW 116
           GKA     + NS +DG K +   L+N          IDI++NNAGI    +    ++  +
Sbjct: 56  GKAFLIEADLNS-IDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIF 114

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             +  V++   F + +   P ++ +  GR++  +S    LG  G   Y  +K AL  ++ 
Sbjct: 115 DEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSIAYGLSKGALNTMTL 172

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L+    +  I  N I+P
Sbjct: 173 PLAKHLGERGITVNTIMP 190

Length = 254

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 1e-14
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 19/191 (9%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +V IVTG  +G+G + +L LAE GA  V+             S   D    E+R+   +
Sbjct: 7   DKVVIVTGGASGIGAAISLRLAEEGAIPVIFG----------RSAPDDEFAEELRALQPR 56

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH-- 123
           A      + D  +    V+  +  FGRID ++NNAG+  D     +       V  +   
Sbjct: 57  AEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGV-NDG--VGLEAGREAFVASLERN 113

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L   + ++    PH+K    G +V  +S + L G  G + Y+AAK A + L+   ++   
Sbjct: 114 LIHYYVMAHYCLPHLKASR-GAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALA 172

Query: 184 KNNIHCNVIVP 194
           K+ +  N ++P
Sbjct: 173 KDGVRVNAVIP 183

Length = 258

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 28/198 (14%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG- 67
           G  A+VTGA  G+G++YA  LA+RG +V++  +   ++         D V  EI  K G 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVIL--ISRTQE-------KLDAVAKEIEEKYGV 51

Query: 68  --KAVPNYNSVVD---GDKIVQ---TALENFGRIDIVINNAGILRD--KSFARIS-DTDW 116
             K +       D   GD I +     LE    I I++NN GI     + F     D   
Sbjct: 52  ETKTI-----AADFSAGDDIYERIEKELEGL-DIGILVNNVGISHSIPEYFLETPEDELQ 105

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
            ++ +V++    +++R   P M K+  G +V  +S +GL+     A YSA+K  L   S 
Sbjct: 106 DII-NVNVMATLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSR 164

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L  E +   I    ++P
Sbjct: 165 ALYEEYKSQGIDVQSLLP 182

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 68.9 bits (169), Expect = 3e-14
 Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 11/181 (6%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           VA V GAG GLG + A   A  G SV    L  +R+      K    +V  IR  GG A 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVA---LAARREA-----KLEALLVDIIRDAGGSAK 52

Query: 71  PNYNSVVDGDKIVQT---ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
                  D D+++       E  G +++++ NAG          +   ++ V ++   G 
Sbjct: 53  AVPTDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGG 112

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
           F  +R A   M  +  G ++ T + + L G  G A ++ AK AL  L+ +++ E     I
Sbjct: 113 FLAAREAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGI 172

Query: 188 H 188
           H
Sbjct: 173 H 173

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 69.1 bits (169), Expect = 3e-14
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 30/196 (15%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             +V ++TGA  G+GR+ A+L A RG SV +N            + AA+     +R+ GG
Sbjct: 1   MRKVVLITGASRGIGRATAVLAAARGWSVGINYAR--------DAAAAEETADAVRAAGG 52

Query: 68  KAVPNYNSVVDGDKIV---QTALENFGRIDIVINNAGI------LRDKSFARISDTDWQL 118
           +A      V +   ++         FGR+D ++NNAGI      L D   AR+     + 
Sbjct: 53  RACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARL-----RR 107

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGN-FGQANYSAAKMAL--- 171
           + D ++ GA+  +R A   +     GR   +V  +S +  LG+     +Y+ +K A+   
Sbjct: 108 MFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTL 167

Query: 172 -VGLSNTLSIEGEKNN 186
            +GL+  L   G + N
Sbjct: 168 TLGLAKELGPHGVRVN 183

Length = 248

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 68.4 bits (168), Expect = 7e-14
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 28/193 (14%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGA +G+G++ A  LA +G +V     G  R  D    K  D     +       
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTV----YGAARRVD----KMEDLASLGVH------ 49

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGI-----LRDKSFARISDTDWQLVQD 121
            P    V D   I   V T +   GRID+++NNAG      + D     I +   Q   +
Sbjct: 50  -PLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVP---IDEARRQF--E 103

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+L GA R+++   PHM+ Q  GR++  +S  G +     A Y A K AL G S+ L +E
Sbjct: 104 VNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLE 163

Query: 182 GEKNNIHCNVIVP 194
                I   VI P
Sbjct: 164 VAPFGIDVVVIEP 176

Length = 273

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +V I+TG  +G+G++ A   AE GA+VV+          G++ +  +    EI    G+
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVIT---------GRTKEKLEEAKLEIEQFPGQ 51

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSF----ARISDTDWQLVQD 121
            +     V + + +   V+   E FGRID +INNA      +F      +S   W  V D
Sbjct: 52  VLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAA----GNFICPAEDLSVNGWNSVID 107

Query: 122 VHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + L G F  S+A   + ++K   G ++   +        G  + +AAK  ++ ++ TL++
Sbjct: 108 IVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAV 167

Query: 181 E-GEKNNIHCNVIVP 194
           E G K  I  N I P
Sbjct: 168 EWGRKYGIRVNAIAP 182

Length = 252

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G V ++TGA +G+G++ A   A RGA +V+      RD +     A   V  E R+ G +
Sbjct: 7   GAVVVITGASSGIGQATAEAFARRGARLVL----AARDEE-----ALQAVAEECRALGAE 57

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDW----QLVQD 121
            +     V D D++      A    GRID+ +NN G+    +  R  +T      Q++Q 
Sbjct: 58  VLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGV---GAVGRFEETPIEAHEQVIQ- 113

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
            +L G  R + AA P  KKQ +G  +   S  G       A YSA+K  L G S  L  E
Sbjct: 114 TNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGE 173

Query: 182 -GEKNNIH-CNV 191
             +  +IH C+V
Sbjct: 174 LADHPDIHVCDV 185

Length = 330

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 17/178 (9%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
             A++TGA  G+G + A  LA     ++           G+ ++  D + AE+      A
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLLG----------GRPAERLDELAAELPG----A 49

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
            P    + D + I   A+E  GR+D++++NAG+      A  +  +W+   +V++     
Sbjct: 50  TPFPVDLTDPEAI-AAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAE 108

Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
           ++R   P + +  +G +V   S +GL  N G  +Y+A+K AL  L++ L  E E  N+
Sbjct: 109 LTRLLLPAL-RAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREE-EPGNV 164

Length = 227

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 19/200 (9%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M     F G+  +V G  +G+    A   A  GA+V V           +S +  D  VA
Sbjct: 1   MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVA---------SRSQEKVDAAVA 51

Query: 61  EIRSKGGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT 114
           +++  G +       V +Y +V           + FG ID++++ A        A +S  
Sbjct: 52  QLQQAGPEGLGVSADVRDYAAVEAA---FAQIADEFGPIDVLVSGAAGNFPAPAAGMSAN 108

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            ++ V D+ L G F V +AA+P +++     + ++A  + +     QA+  AAK  +  L
Sbjct: 109 GFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM-QAHVCAAKAGVDML 167

Query: 175 SNTLSIEGEKNNIHCNVIVP 194
           + TL++E     I  N IVP
Sbjct: 168 TRTLALEWGPEGIRVNSIVP 187

Length = 264

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 17/192 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+ A++TG  +G+G   A      GA V +          G+   + +   AE+   
Sbjct: 3   RLQGKTALITGGTSGIGLETARQFLAEGARVAIT---------GRDPASLEAARAEL--- 50

Query: 66  GGKA--VPNYNSVVDGDKIVQTAL-ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A  +      V   K +  AL E FGR+D V  NAG+ +        +  +    + 
Sbjct: 51  GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNT 110

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++ G + + +A  P +       +V+  S +  +G    + Y+A+K AL+ L+ TLS E 
Sbjct: 111 NVKGPYFLIQALLPLLANP--ASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGEL 168

Query: 183 EKNNIHCNVIVP 194
               I  N + P
Sbjct: 169 LPRGIRVNAVSP 180

Length = 249

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 66.3 bits (162), Expect = 4e-13
 Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 8/187 (4%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            V ++TG  +G+G   A+ LA    S         RD      K    +     +  G  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLA-SDPSKRFKVYATMRD-----LKKKGRLWEAAGALAGGT 54

Query: 70  VPNYNSVVDGDKIVQTALENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
           +      V   K V  A+E      +D+++ NAG+        +S+     V DV++ G 
Sbjct: 55  LETLQLDVCDSKSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGT 114

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
            R+ +A  P MK++  GR+++T+S  GL G      Y A+K AL GL  +L+++    N+
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

Query: 188 HCNVIVP 194
           H ++I  
Sbjct: 175 HLSLIEC 181

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 66.0 bits (161), Expect = 5e-13
 Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R+  +V IVTG   G+GR       E GA VV    G          +A ++ +      
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAA------GQALESELNRAGPG 59

Query: 66  GGKAVP-NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD--- 121
             K VP +     D   ++   +E FGRID ++NNAG           +T  Q  +D   
Sbjct: 60  SCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGW--HPPHQTTDETSAQEFRDLLN 117

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++L   F  S+ A PH++K   G ++  +S  G +G    A Y A K A+  ++  L+++
Sbjct: 118 LNLISYFLASKYALPHLRKSQ-GNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVD 176

Query: 182 GEKNNIHCNVIVP 194
             +  +  N I P
Sbjct: 177 ESRYGVRVNCISP 189

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 65.6 bits (160), Expect = 6e-13
 Identities = 60/187 (32%), Positives = 87/187 (46%), Gaps = 25/187 (13%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           +R  G V +VTG  +GLGR+        GA V V D         KS+      + E+ +
Sbjct: 1   MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD---------KSAAG----LQELEA 47

Query: 65  KGGKAV----PNYNSVVDGDKIVQTALENFGRIDIVINNAGI------LRDKSFARISDT 114
             G AV     +  S+ D  + V   +  FG+ID +I NAGI      L D    RI D 
Sbjct: 48  AHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRI-DE 106

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            +  V  +++ G     +AA P +   + G ++ T SN+G   N G   Y+AAK A+VGL
Sbjct: 107 AFDEVFHINVKGYLLAVKAALPALV-ASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGL 165

Query: 175 SNTLSIE 181
              L+ E
Sbjct: 166 VKELAFE 172

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 64.6 bits (158), Expect = 9e-13
 Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 21/217 (9%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
            ++TGA  G+G      L  RG + V+      RD    +  AA      + +   +   
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVI---ATCRDPSAATELAA------LGASHSRLHI 51

Query: 72  NYNSVVD-GDKIVQ--TALENFGRIDIVINNAGILRDKSFAR-ISDTDWQLVQDVHLTGA 127
               V D   +  +          +D++INNAGIL     A  +   D   V  V++ G 
Sbjct: 52  LELDVTDEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGP 111

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGN---FGQANYSAAKMALVGLSNTLSIEGEK 184
             +++A  P + K    +++  +S  G +G+    G  +Y A+K AL  L+ +L++E ++
Sbjct: 112 LLLTQAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKR 171

Query: 185 NNIHCNVIVP-TAASRLTEDILPPGSYPVKGFDPPVS 220
           + I    + P    + +      P +       P  S
Sbjct: 172 DGITVVSLHPGWVRTDMGG----PFAKNKGPITPEES 204

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 64.8 bits (158), Expect = 9e-13
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 21/200 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R+ GRVA+VTGA  G+G + A  L + G  VV         G  +     + + AE +S 
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVV---------GCARRVDKIEALAAECQSA 53

Query: 66  GGKAVPNYN-SVVDGDKIV---QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           G   +  Y   + + ++I+            +D+ INNAG+ R +         W+ + D
Sbjct: 54  GYPTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFD 113

Query: 122 VHLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSG---LLGNFGQANYSAAKMALVGLSN 176
           V++      +R A+  MK++N   G ++   S SG      +     Y+A K A+  L+ 
Sbjct: 114 VNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHF-YAATKHAVTALTE 172

Query: 177 TL--SIEGEKNNIHCNVIVP 194
            L   +   K +I    I P
Sbjct: 173 GLRQELREAKTHIRATSISP 192

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQR--------DGDGKSSKAADTVV 59
             RV  +TG   G+GR+ A   A  G  +++ D   +           +  S +A  T  
Sbjct: 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDE 327

Query: 60  AEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQL 118
           A + S                         +GR+D+++NNAGI    K     S  D+  
Sbjct: 328 AAVES-----------------AFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTR 370

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           V DV+L+GAF  +RAA   M +   G +V   S + LL    +  Y A+K A+  LS +L
Sbjct: 371 VYDVNLSGAFACARAAARLMSQG--GVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSL 428

Query: 179 SIEGEKNNIHCNVIVP 194
           + E     I  N + P
Sbjct: 429 ACEWAPAGIRVNTVAP 444

Length = 520

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 65.3 bits (159), Expect = 1e-12
 Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 25/199 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL-GGQRDGDGKSSKAADTVVAEIRS 64
           R  GR A++TGA +G+GR+ A+  A  GA + +N L   ++D        A  VV  I++
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQD--------AAEVVQLIQA 103

Query: 65  KGGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGI-LRDKSFARISDTD 115
           +G KAV      + GD        ++V+ A++  G +DI++N AG     K  A I+   
Sbjct: 104 EGRKAV-----ALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQ 158

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           +      ++   F + +AA PH+       ++ T S      +    +Y++ K A+V  +
Sbjct: 159 FDATFKTNVYAMFWLCKAAIPHLPPG--ASIINTGSIQSYQPSPTLLDYASTKAAIVAFT 216

Query: 176 NTLSIEGEKNNIHCNVIVP 194
             L+ +  +  I  N + P
Sbjct: 217 KALAKQVAEKGIRVNAVAP 235

Length = 300

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 64.8 bits (158), Expect = 1e-12
 Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 19/192 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAAD--TVVAEIRS 64
           F G+ A+VTGAG G+GR+    LA+ GA VV             S   AD  ++V E   
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVV-----------AVSRTQADLDSLVRECPG 53

Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
                 P    + D D   + AL + G +D+++NNA +   + F  ++   +    DV++
Sbjct: 54  ----IEPVCVDLSDWDA-TEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNV 108

Query: 125 TGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
                VS+     M  +   G +V  +S +          Y + K AL  L+  +++E  
Sbjct: 109 RAVIHVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELG 168

Query: 184 KNNIHCNVIVPT 195
            + I  N + PT
Sbjct: 169 PHKIRVNSVNPT 180

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 1e-12
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 13/162 (8%)

Query: 14  VTGAGAGLGRSYALLLAERGASVV--VNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
           +TGA +G GR     L  RG  V   V       D   +       +  ++      AV 
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA--AVR 64

Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVS 131
                     +V  A    GRID+V++NAG     +   +SD   +   D +L G+ +V 
Sbjct: 65  ---------AVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVI 115

Query: 132 RAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
           RAA PH+++Q  GR+V  +S  G +   G + Y A K  + G
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG 157

Length = 276

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 22/179 (12%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
            ++TGA +G+G + A   A+ GA ++   L G+R         A+ +  E+  + G   P
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLI---LTGRR---------AERL-QELADELGAKFP 49

Query: 72  NYNSVVDGD----KIVQTALEN----FGRIDIVINNAGILRD-KSFARISDTDWQLVQDV 122
                +  D    + ++ ALEN    F  IDI++NNAG+             DW+ + D 
Sbjct: 50  VKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDT 109

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++ G   V+R   P M  +N G ++   S +G     G   Y A K A+   S  L  +
Sbjct: 110 NVKGLLNVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKD 168

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 11/96 (11%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+ A+VTG+  G+G   A +LA  GA VVVN            +  A+ VVAEI + GG
Sbjct: 5   PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQK--------APRANKVVAEIEAAGG 56

Query: 68  KAVPNYNSVVDG---DKIVQTALENFGRIDIVINNA 100
           +A      + D      ++ TA E FG +D ++ NA
Sbjct: 57  RASAVGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 21/132 (15%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A+VTGA   +GR+ AL LA  G  V V+          +S   A+ + AEIR+ G +A
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVH--------YNRSRDEAEALAAEIRALGRRA 61

Query: 70  VPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           V      +  D         +V  A    G I +++NNA +    S A  +   W     
Sbjct: 62  V-----ALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMA 116

Query: 122 VHLTGAFRVSRA 133
            +L   F +++A
Sbjct: 117 TNLRAPFVLAQA 128

Length = 258

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 21/183 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+V +VTGA  G+GR++   L  RGA+ V       RD               +   G +
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVY---AAARD------------PESVTDLGPR 50

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ---DVHLT 125
            VP    V D   +   A E    + I++NNAGI R  S   + + D   ++   + +  
Sbjct: 51  VVPLQLDVTDPASV-AAAAEAASDVTILVNNAGIFRTGSL--LLEGDEDALRAEMETNYF 107

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G   ++RA  P +     G +V   S    +       YSA+K A   L+  L  E    
Sbjct: 108 GPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQ 167

Query: 186 NIH 188
              
Sbjct: 168 GTR 170

Length = 238

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 29/194 (14%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            RV +V G    LG +       RG  V   DL          ++ AD  +         
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDL--------AENEEADASII-------- 44

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAG-----ILRDKSFARISDTDWQLVQDVH 123
            + + +      ++V +     G++D +I  AG       + KSF +    +W L+   +
Sbjct: 45  VLDSDSFTEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVK----NWDLMWKQN 100

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE-- 181
           L  +F  S  A  H+     G LV+T + + L    G   Y AAK A+  L+ +L+ E  
Sbjct: 101 LWTSFIASHLATKHLLS--GGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENS 158

Query: 182 GEKNNIHCNVIVPT 195
           G       N I+P 
Sbjct: 159 GLPAGSTANAILPV 172

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 60.6 bits (147), Expect = 4e-11
 Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 17/205 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG- 67
           G++ +VTG   G+GR  A    E GA V+++          + ++A      E+ + G  
Sbjct: 6   GKIVLVTGGSRGIGRMIAQGFLEAGARVIIS---------ARKAEACADAAEELSAYGEC 56

Query: 68  KAVP-NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
            A+P + +S    + +V    E   R+D+++NNAG           ++ W  V D+++  
Sbjct: 57  IAIPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKS 116

Query: 127 AFRVSRAAWPHMKK----QNYGRLVMTASNSGLLGNFGQA-NYSAAKMALVGLSNTLSIE 181
            F +++A  P ++     +N  R++   S +G++ +  +  +Y A+K A+  L+  L+ E
Sbjct: 117 VFFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKE 176

Query: 182 GEKNNIHCNVIVPTA-ASRLTEDIL 205
               +I  N I P    S++T  +L
Sbjct: 177 LAGEHITVNAIAPGRFPSKMTAFLL 201

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 14/183 (7%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           Q++ +GRVA+VTG  +G+G +   LL E GASV +      RD +  +S       A +R
Sbjct: 3   QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAI----CGRDEERLAS-----AEARLR 53

Query: 64  SK--GGKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDTDWQL 118
            K  G + +     V+D   +   A      FG +D+++NNAG  R  +FA  +D  W+ 
Sbjct: 54  EKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRD 113

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
             ++        +RA  P ++      +V   S   L         SAA+  L+ L  +L
Sbjct: 114 ELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSL 173

Query: 179 SIE 181
           + E
Sbjct: 174 ATE 176

Length = 265

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             +VA++TG    +G + A  L   G  V ++          +S+  AD + AE+ +   
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHY--------HRSAAEADALAAELNA--- 53

Query: 68  KAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
              P   + +  D        ++V   +  FGR+D ++NNA          I++  W  +
Sbjct: 54  -LRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDL 112

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----------GQANYSAAKM 169
              +L   F +S+AA P ++KQ            G + N           G   Y AAK 
Sbjct: 113 FASNLKAPFFLSQAAAPQLRKQ-----------RGAIVNITDIHAERPLKGYPVYCAAKA 161

Query: 170 ALVGLSNTLSIE 181
           AL  L+ +L++E
Sbjct: 162 ALEMLTRSLALE 173

Length = 249

>gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x)

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 28/186 (15%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
               +R D    ++TG   GLG   A  L ERGA  +V  L G+R      S AA   +A
Sbjct: 142 PARPLRPDATY-LITGGLGGLGLLVAEWLVERGARHLV--LTGRR----APSAAARQAIA 194

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDI-------VINNAGILRDKSFARISD 113
            +   G + V     V D D +         +I         VI+ AG+L D     +++
Sbjct: 195 ALEEAGAEVVVLAADVSDRDALAAA----LAQIRASLPPLRGVIHAAGVLDDGV---LAN 247

Query: 114 TDWQLVQDV---HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMA 170
            DW+  + V    + GA+ + +      +       V+ +S + LLG+ GQANY+AA   
Sbjct: 248 QDWERFRKVLAPKVQGAWNLHQLT----QDLPLDFFVLFSSVASLLGSPGQANYAAANAF 303

Query: 171 LVGLSN 176
           L  L++
Sbjct: 304 LDALAH 309

Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 20/168 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVV---NDLGGQRDGDGKSSKAADTVVAEIRSK 65
           G+V ++ G    LG   A  LA +GA  V    N    + D        A+  VA +++ 
Sbjct: 8   GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKAD--------AEETVAAVKAA 59

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G KAV    +  +    +K+   A   FGR DI IN  G +  K    IS+ ++  +  V
Sbjct: 60  GAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAV 119

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAK 168
           +   AF   + A  H+   + G++V   ++  LLG F    + Y+ +K
Sbjct: 120 NSKSAFFFIKEAGRHL--NDNGKIVTLVTS--LLGAFTPFYSAYAGSK 163

Length = 257

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAA-------DTVVAEIR 63
           V I+TGA  G+GR+ A  L +RG+  VV  L  + +   +  K          TV A++ 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLL-ARSEEPLQELKEELRPGLRVTTVKADLS 59

Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDV 122
              G             ++++   +  G  D++INNAG L        I   + Q   D+
Sbjct: 60  DAAGVE-----------QLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDL 108

Query: 123 HLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +LT    ++       KK+     +V  +S + +    G   Y ++K A       L+ E
Sbjct: 109 NLTSPVCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE 168

Query: 182 GEK 184
              
Sbjct: 169 EPD 171

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 60/213 (28%), Positives = 90/213 (42%), Gaps = 33/213 (15%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           V   G+  ++TGA +G+G + A   A RGA+VV            +     D V   I  
Sbjct: 36  VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAV---------ARREDLLDAVADRITR 86

Query: 65  KGG--KAVPNYNSVVDG-DKIVQTALENFGRIDIVINNAG--ILR--DKSFARISDTDWQ 117
            GG   AVP   S +D  D +V    +  G +DI+INNAG  I R   +S  R  D +  
Sbjct: 87  AGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERT 146

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS---NSGLLGNFGQANYSAAKMALVGL 174
           +V  ++     R+ R   P M ++  G ++  A+    S     F    Y+A+K AL  +
Sbjct: 147 MV--LNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSV--YNASKAALSAV 202

Query: 175 SNTLSIEGEKNNIHCN----------VIVPTAA 197
           S  +  E     +H            +I PT A
Sbjct: 203 SRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA 235

Length = 293

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 13/134 (9%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            VA+VTG   G+G   A  LA  G  + +ND            +       E+R+ G + 
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPD--------DEELAATQQELRALGVEV 54

Query: 70  VPNYNSVVDGD---KIVQTALENFGRIDIVINNAGI--LRDKSFARISDTDWQLVQDVHL 124
           +     V D      ++  A   +GRID ++NNAG+          ++   +  V  ++L
Sbjct: 55  IFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINL 114

Query: 125 TGAFRVSRAAWPHM 138
            G F +++A    M
Sbjct: 115 RGPFFLTQAVAKRM 128

Length = 256

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 57.4 bits (139), Expect = 4e-10
 Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 18/179 (10%)

Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           ++  G   ++TG  +G+G + A    E G +V++          G++ +      AE   
Sbjct: 1   MKTTGNTILITGGASGIGLALAKRFLELGNTVIIC---------GRNEERLAEAKAENPE 51

Query: 65  KGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
              +       V D D     V+   + +  ++++INNAGI R++      D      Q+
Sbjct: 52  IHTEVC----DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE 107

Query: 122 VH--LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           +   L    R++    PH+ +Q    ++  +S    +       Y A K A+   +  L
Sbjct: 108 IATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL 166

Length = 245

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 56.8 bits (137), Expect = 5e-10
 Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 21/206 (10%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
           A++ GA  G+GR+ A  LA RG  +    L   RD    +  AA+         G  A P
Sbjct: 1   ALILGATGGIGRALARALAGRGWRL----LLSGRDAGALAGLAAEV--------GALARP 48

Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVS 131
              + V  +  V    +  G +D+++  AG +  K  AR     W+ + D +LTGA  V 
Sbjct: 49  ---ADVAAELEVWALAQELGPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVL 105

Query: 132 RAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNV 191
           + A   +      RLV   +   L+   G + Y+AAK AL         E     +   V
Sbjct: 106 KHALALLAAG--ARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRGLRL-TLV 162

Query: 192 IVPTAASRLTEDILPPGSYPVKGFDP 217
             P   + L     PPG  P     P
Sbjct: 163 RPPAVDTGLWA---PPGRLPKGALSP 185

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 56.8 bits (137), Expect = 7e-10
 Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 12/182 (6%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
                  +GRVA+VTGA  G+G   A  L   G  VV+ DL  +R      SK A   + 
Sbjct: 2   SEPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRER-----GSKVAK-ALG 55

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL--RDKSFARISDTDWQL 118
           E        V +   V  G   V   L  FGR+D ++ NA I    + +   +S   W  
Sbjct: 56  ENAWFIAMDVADEAQVAAG---VAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNR 112

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           V  V+LTG   +++   P+++  N G +V  AS            Y+A+K  L+ L++ L
Sbjct: 113 VLAVNLTGPMLLAKHCAPYLRAHN-GAIVNLASTRARQSEPDTEAYAASKGGLLALTHAL 171

Query: 179 SI 180
           +I
Sbjct: 172 AI 173

Length = 255

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 13/173 (7%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              +  +VTGA  G+G+++   L   GA  V       RD        A  +VA+    G
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKV---YAAVRDPGS-----AAHLVAK---YG 49

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTD-WQLVQDVHLT 125
            K VP    V D + I + A      +D+VINNAG+L+  +       +  +   DV++ 
Sbjct: 50  DKVVPLRLDVTDPESI-KAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVF 108

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           G  R+++A  P +K    G +V   S + L        YSA+K A   L+  L
Sbjct: 109 GLLRLAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGL 161

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 37/118 (31%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +P+Q    GRVA+VTGA  GLG   A  LA +GA VV+      R+ D K   AA  + A
Sbjct: 11  IPDQ---SGRVAVVTGANTGLGYETAAALAAKGAHVVL----AVRNLD-KGKAAAARITA 62

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQ----TALE-----------NFGRIDIVINNAGIL 103
                              D  +Q    T+L             + RID++INNAG++
Sbjct: 63  ATP--------------GADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVM 106

Length = 306

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 48/167 (28%), Positives = 67/167 (40%), Gaps = 23/167 (13%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           DG   ++TG   GLG   A  LA RGA  +V  L  +R         A    A +R+ G 
Sbjct: 150 DGTY-LITGGLGGLGLLVARWLAARGARHLV--LLSRRGPAP----RAAARAALLRAGGA 202

Query: 68  KAVPNYNSVVDGDKIVQTALENFGR-------IDIVINNAGILRDKSFARISDTDWQLVQ 120
           +      SVV  D     AL            +  VI+ AG+LRD   A ++   +  V 
Sbjct: 203 RV-----SVVRCDVTDPAALAALLAELAAGGPLAGVIHAAGVLRDALLAELTPAAFAAVL 257

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
              + GA  +                V+ +S + LLG  GQA Y+AA
Sbjct: 258 AAKVAGALNLHELTPDLPLD----FFVLFSSVAALLGGAGQAAYAAA 300

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 54.6 bits (131), Expect = 6e-09
 Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   R A+VTG  +G+GR+ A+  A  GA V ++ L  + +        A  V   I   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEED-------AQDVKKIIEEC 98

Query: 66  GGKAVPNYNSVVD---GDKIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQD 121
           G KAV     + D      +V  A +  G +DI+   AG  +     A ++   +Q    
Sbjct: 99  GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFA 158

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +++   F +++ A P + K     ++ T+S      +    +Y+A K A++  S  L+ +
Sbjct: 159 INVFALFWLTQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQ 216

Query: 182 GEKNNIHCNVIVP 194
             +  I  N++ P
Sbjct: 217 VAEKGIRVNIVAP 229

Length = 294

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 9/182 (4%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+  ++TGA  G+G + A   A  G  + +      RD D      A  + A     
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHL----VARDAD-ALEALAADLRAAHGVD 58

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                 + +S    +++   A    G IDI++NNAG +       + D  W+   ++ + 
Sbjct: 59  VAVHALDLSSPEAREQLAAEA----GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVF 114

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G   ++R A+P MK +  G +V     +G   +      SA   AL+  +  L  +   +
Sbjct: 115 GYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDD 174

Query: 186 NI 187
            +
Sbjct: 175 GV 176

Length = 259

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 53.2 bits (127), Expect = 2e-08
 Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 25/198 (12%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+VTGA  G+GR+ A  LA  GA V ++         G   + A+  V EI+S GG 
Sbjct: 4   GKVALVTGASRGIGRAIAKRLANDGALVAIH--------YGNRKEEAEETVYEIQSNGGS 55

Query: 69  A------------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDW 116
           A            V    S +D +   +T    F   DI+INNAGI         ++  +
Sbjct: 56  AFSIGANLESLHGVEALYSSLDNELQNRTGSTKF---DILINNAGIGPGAFIEETTEQFF 112

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             +  V+    F + + A   ++  +    + +A+    L +F    YS  K A+  ++ 
Sbjct: 113 DRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF--IAYSMTKGAINTMTF 170

Query: 177 TLSIEGEKNNIHCNVIVP 194
           TL+ +     I  N I+P
Sbjct: 171 TLAKQLGARGITVNAILP 188

Length = 252

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 52.6 bits (126), Expect = 2e-08
 Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 15/187 (8%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA-EIRSKGGK 68
            +A+VT A    G + A  L E G +VV +D          S   A    A E  + G K
Sbjct: 2   SIALVTHARHFAGPASAEALTEDGYTVVCHD---------ASFADAAERQAFESENPGTK 52

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQDVHLTGA 127
           A+    S    +++V   L+  G ID++++N  I R  +     S+ D +   +      
Sbjct: 53  AL----SEQKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFP 108

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
           F + +AA   MKK   G ++   S          + Y  A+ A V L+ +L+ E  ++NI
Sbjct: 109 FALLQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNI 168

Query: 188 HCNVIVP 194
               I P
Sbjct: 169 LVYAIGP 175

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 14/101 (13%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKG 66
           G+  I+TGA  G+G+  A  LA RGA V++      RD   K  +AA    AEIR  +  
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIM----ACRD-MAKCEEAA----AEIRRDTLN 51

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILR 104
            + +  +  +     I       L    R+D++INNAG++R
Sbjct: 52  HEVIVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMR 92

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R  ++TG  +G+G   A  L   G  V                K  D  VA + ++G +A
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFAT-----------CRKEED--VAALEAEGLEA 51

Query: 70  VP-NYNSVVDGDKIVQTALE-NFGRIDIVINN-----AGILRDKSFARISDTDWQLVQDV 122
              +Y        +V   LE + GR+D + NN      G + D     +     Q   + 
Sbjct: 52  FQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRA---QF--EA 106

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +  G   ++R   P M+KQ  GR+V  +S  GL+    +  Y+A+K A+ GLS TL +E 
Sbjct: 107 NFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMEL 166

Query: 183 EKNNIHCNVIVP-TAASRLTEDILP 206
           + + IH ++I P    +R   + L 
Sbjct: 167 QGSGIHVSLIEPGPIETRFRANALA 191

Length = 277

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 35/209 (16%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+  ++TGAG  +G +    + E G  V+  D+           +A + ++  +  +  
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADI---------DKEALNELLESLGKEFK 53

Query: 68  KAVPNYNSVVDGDKIVQTALENF--------GRIDIVINNAGILRDKSFAR----ISDTD 115
                  S+V+ D   Q +LE F        G+ID  +N A   R+K + +    +S  D
Sbjct: 54  SKK---LSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCA-YPRNKDYGKKFFDVSLDD 109

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-NFGQAN---------YS 165
           +     +HL  +F  S+    + KKQ  G LV  +S  G++   F             Y+
Sbjct: 110 FNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYA 169

Query: 166 AAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           A K  ++ L+  L+   + +NI  N + P
Sbjct: 170 AIKAGIIHLTKYLAKYFKDSNIRVNCVSP 198

Length = 256

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 48/202 (23%), Positives = 75/202 (37%), Gaps = 48/202 (23%)

Query: 14  VTGAGAGLGRSYALLLAERGASV--------VVNDLGGQRDGDGKSS-KAADTVVAEIRS 64
           +TGA +G+G++ A   A +GA++         +     +     + S  AAD        
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAAD-------- 58

Query: 65  KGGKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRD---------KSFARIS 112
                      V D D +   A   +   G  D+VI NAGI              F  + 
Sbjct: 59  -----------VRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVM 107

Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
           DT++       +   F+   A    M+    G LV  AS +G+ G  G   YSA+K A +
Sbjct: 108 DTNY-----FGMVATFQPFIAP---MRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI 159

Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
               +L +E     +    I P
Sbjct: 160 KYLESLRVELRPAGVRVVTIAP 181

Length = 257

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 26/199 (13%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G  A+VTG   G+G+ +A  LA +G ++V+           ++      V   I+SK  K
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLV---------ARNPDKLKDVSDSIQSKYSK 103

Query: 69  AVPNYNSVVD-------GDKIVQTALENFGRIDIVINNAGILRDKSFAR-ISDTDWQLVQ 120
                  VVD       G K ++  +E    + ++INN G+     +AR   + D +L++
Sbjct: 104 -TQIKTVVVDFSGDIDEGVKRIKETIEGLD-VGVLINNVGV--SYPYARFFHEVDEELLK 159

Query: 121 D---VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--GNFGQANYSAAKMALVGLS 175
           +   V++ G  +V++A  P M K+  G ++   S + ++   +   A Y+A K  +   S
Sbjct: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFS 219

Query: 176 NTLSIEGEKNNIHCNVIVP 194
             L +E +K+ I     VP
Sbjct: 220 RCLYVEYKKSGIDVQCQVP 238

Length = 320

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)

Query: 13  IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPN 72
           ++TG  +G+G   AL L  RG  V    L   R       K  D  VA + S G   +  
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRV----LAACR-------KPDD--VARMNSLGFTGI-- 50

Query: 73  YNSVVDGDKIVQTALENF----GRIDIVINNAGILRDKSFARISDTDWQLVQD--VHLTG 126
              + D + + + A E       R+  + NNAG       + IS    Q+ Q    +  G
Sbjct: 51  LLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQ--QMEQQFSTNFFG 108

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
             +++    P M     GR+VMT+S  GL+   G+  Y+A+K AL   S+ L +E   + 
Sbjct: 109 THQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSG 168

Query: 187 IHCNVIVPTA-ASRLTEDI 204
           I  ++I P    +R T+++
Sbjct: 169 IKVSLIEPGPIRTRFTDNV 187

Length = 256

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 47.2 bits (112), Expect = 1e-06
 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 10/188 (5%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G++A  T +  G+G   A +LA  GA V++      R+ +    KA + + +E       
Sbjct: 8   GKLAFTTASSKGIGFGVARVLARAGADVILL----SRNEENLK-KAREKIKSESNVDVSY 62

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
            V +     D ++ V+  L+N G  DI   + G  +   F  +S  DW+    + L  A 
Sbjct: 63  IVADLTKREDLERTVKE-LKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAV 121

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNS--GLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            ++RA  P M+++ +GR++ + S +    + N   +N    ++++ GL  TL+ E     
Sbjct: 122 YLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSN--VVRISMAGLVRTLAKELGPKG 179

Query: 187 IHCNVIVP 194
           I  N I+P
Sbjct: 180 ITVNGIMP 187

Length = 263

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 30/201 (14%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +  +VTGA  GLG   A   A  GA+V++           +  K  + V   I   G  
Sbjct: 6   DKTILVTGASQGLGEQVAKAYAAAGATVILV---------ARHQKKLEKVYDAIVEAGHP 56

Query: 69  ---AVPNYNSVVDGDK-----IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
              A+  ++ +   +K         A    G++D +++ AG      F  +S  D+Q V 
Sbjct: 57  EPFAIR-FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAG-----YFYALSPLDFQTVA 110

Query: 121 D------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
           +      ++      ++RA +P +K+     ++    + G         + A+K AL  L
Sbjct: 111 EWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYL 170

Query: 175 SNTLSIEGEK-NNIHCNVIVP 194
               + E E+  N+  NV+VP
Sbjct: 171 CKVAADEWERFGNLRANVLVP 191

Length = 239

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 45/152 (29%), Positives = 62/152 (40%), Gaps = 28/152 (18%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+ AIVTG  +GLG      LA+ GA V+V      R  D      A   +A I     
Sbjct: 25  SGKTAIVTGGYSGLGLETTRALAQAGAHVIV----PARRPD-----VAREALAGIDGV-- 73

Query: 68  KAVPNYNSVVDGD----KIVQTALENFG----RIDIVINNAGILRDKSFARISDTDWQLV 119
                   VV  D    + V+   E F     RIDI+INNAG++      R+ D  W+  
Sbjct: 74  -------EVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPE-TRVGD-GWEAQ 124

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS 151
              +  G F +    WP +      R+V  +S
Sbjct: 125 FATNHLGHFALVNLLWPALAAGAGARVVALSS 156

Length = 315

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 16/117 (13%)

Query: 96  VINNAGILRDKSFARISDTDWQLVQD------VHLTGAFRVSRAAWPHMKKQNYGRLVMT 149
           ++NNAGIL         D +   + D      V+L G   V++A  P + ++  GR+V  
Sbjct: 82  LVNNAGIL-----GFGGDEELLPMDDYRKCMEVNLFGTVEVTKAFLP-LLRRAKGRVVNV 135

Query: 150 ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP----TAASRLTE 202
           +S  G +       Y A+K A+   S++L  E +   +  ++I P    T  +  +E
Sbjct: 136 SSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGITGNSE 192

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 18/187 (9%)

Query: 13  IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPN 72
           ++TGAG+G GR  AL LA +G +V+         G   + +         R      V  
Sbjct: 6   LITGAGSGFGREVALRLARKGHNVIA--------GVQIAPQVTALRAEAARRGLALRVEK 57

Query: 73  YNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ---DVHLTGAFR 129
            +     D     A E    +D+++NNAGI    +   I     +LV+   + ++ G   
Sbjct: 58  LDLTDAID--RAQAAEW--DVDVLLNNAGIGEAGAVVDIP---VELVRELFETNVFGPLE 110

Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
           +++     M  +  G++V T+S +GL+       Y A+K AL  ++  +  E +   I  
Sbjct: 111 LTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQV 170

Query: 190 NVIVPTA 196
             + P  
Sbjct: 171 ATVNPGP 177

Length = 257

>gnl|CDD|187657 cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 16/171 (9%)

Query: 13  IVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           ++TG   GLG      L +RGA  ++++    G +             + E +S+  K  
Sbjct: 222 LITGGSGGLGLEILKWLVKRGAVENIIILSRSGMKWELELL-------IREWKSQNIKFH 274

Query: 71  PNYNSVVDGDKIVQT-----ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                V D   + +           G I  + + A +L DK     +++ +  V    + 
Sbjct: 275 FVSVDVSDVSSLEKAINLILNAPKIGPIGGIFHLAFVLIDKVLEIDTESLFISVNKAKVM 334

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           GA  +   +     K +Y   V+ +S S + G+ GQ NY  A   L  LS 
Sbjct: 335 GAINLHNQSIKRCWKLDY--FVLFSSVSSIRGSAGQCNYVCANSVLDSLSR 383

NADP-dependent KR domain of the multidomain type I FAS, a complex SDR family. This subfamily also includes proteins identified as polyketide synthase (PKS), a protein with related modular protein architecture and similar function. It includes the KR domains of mammalian and chicken FAS, and Dictyostelium discoideum putative polyketide synthases (PKSs). These KR domains contain two subdomains, each of which is related to SDR Rossmann fold domains. However, while the C-terminal subdomain has an active site similar to the other SDRs and a NADP-binding capability, the N-terminal SDR-like subdomain is truncated and lacks these functions, serving a supportive structural role. In some instances, such as porcine FAS, an enoyl reductase (a Rossman fold NAD-binding domain of the medium-chain dehydrogenase/reductase, MDR family) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER); this KR and ER are members of the SDR family. This KR subfamily has an active site tetrad with a similar 3D orientation compared to archetypical SDRs, but the active site Lys and Asn residue positions are swapped. The characteristic NADP-binding is typical of the multidomain complex SDRs, with a GGXGXXG NADP binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 452

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 33/213 (15%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           V ++TG  +G+GR+ A      G  V              + KA D  V  + + G  AV
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWAT-----------ARKAED--VEALAAAGFTAV 49

Query: 71  PNYNSVVDGDKIVQTALE---NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
                V DG  + + A E     G +D++INNAG     +   + D   + ++    T  
Sbjct: 50  QL--DVNDGAALARLAEELEAEHGGLDVLINNAGY---GAMGPLLDGGVEAMRRQFETNV 104

Query: 128 FR---VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           F    V+RA +P +++ + G +V   S SG+L       Y A+K A+  LS+ L +E   
Sbjct: 105 FAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAP 163

Query: 185 NNIHCNVIVPTA--------ASRLTEDILPPGS 209
             +    + P A        ASR  E +L   S
Sbjct: 164 FGVQVMEVQPGAIASQFASNASREAEQLLAEQS 196

Length = 274

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 17/189 (8%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F G+  +V G   G+G +        GA+V     G        S  AA+ +  E    G
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG--------SKDAAERLAQE---TG 52

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             AV       D D ++   +   G +DI++ NAGI        +   D   +  +++  
Sbjct: 53  ATAV--QTDSADRDAVIDV-VRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHA 109

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNTLSIEGEKN 185
            +  S  A   M     GR+++  S +G      G A Y+A+K AL G++  L+ +    
Sbjct: 110 PYHASVEAARQMP--EGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPR 167

Query: 186 NIHCNVIVP 194
            I  NV+ P
Sbjct: 168 GITINVVQP 176

Length = 237

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 44/214 (20%), Positives = 79/214 (36%), Gaps = 27/214 (12%)

Query: 9   GRVAIVTGA--GAGLGRSYALLLAERGASVVVN--DLGGQRDGDGKSSKAADTVVAEIRS 64
            ++A+VTGA    G+G +    LA +G  +         +    G   K    +  EI S
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES 64

Query: 65  KGGK--------AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARIS---- 112
            G +        + P        +++     E  G   I+INNA          ++    
Sbjct: 65  YGVRCEHMEIDLSQPY-----APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQL 119

Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
           D  +     V++     +S A       +  GR++   S   L     +  Y+A K A+ 
Sbjct: 120 DKHYA----VNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIE 175

Query: 173 GLSNTLSIEGEKNNIHCNVIV--PTAASRLTEDI 204
             + +L+ E  +  I  N +   PT    +TE++
Sbjct: 176 AFTKSLAPELAEKGITVNAVNPGPTDTGWITEEL 209

Length = 256

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 42.2 bits (99), Expect = 8e-05
 Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 41/213 (19%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKA 69
            A+VTGA   +G S A+ L + G  VV++          +S+ AA T+ AE+   +   A
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLH--------YHRSAAAASTLAAELNARRPNSA 54

Query: 70  V------PNYNSVVDG-DKIVQTALENFGRIDIVINNAG------ILRDKSFARISDTDW 116
           V       N  ++    + I+      FGR D+++NNA       +LR  +   + D   
Sbjct: 55  VTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKS 114

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN------------- 163
             VQ   L G    S A  P+   + + +            N    N             
Sbjct: 115 LEVQVAELFG----SNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGF 170

Query: 164 --YSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
             Y+ AK AL GL+ + ++E     I  N + P
Sbjct: 171 TMYTMAKHALEGLTRSAALELAPLQIRVNGVAP 203

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 41.4 bits (98), Expect = 9e-05
 Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 40/209 (19%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
            IV GA   +G + A LL+  G  V+             + +++     +I  +      
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVIT------------AGRSSGDYQVDITDEAS---- 44

Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVS 131
                      ++   E  G  D +++ AG       A ++D D+Q   +  L G   + 
Sbjct: 45  -----------IKALFEKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLV 93

Query: 132 RAAWPHMKKQNYGRLVMTASNSGLLG---NFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
           R   P++     G + +T   SG+L      G A  +    AL G     +IE  +  I 
Sbjct: 94  RHGLPYLNDG--GSITLT---SGILAQRPIPGGAAAATVNGALEGFVRAAAIELPR-GIR 147

Query: 189 CNVIVPTAASRLTEDILPPGSYPVKGFDP 217
            N + P     + E +   G +   GF+P
Sbjct: 148 INAVSPGV---VEESLEAYGDF-FPGFEP 172

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 22/190 (11%)

Query: 11  VAIVTGAGAGLGRSYALLLAER---GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           V +VTGA  G GR+ A  LA+      SV+V  L  + D   +  KA   + AE      
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLV--LSARNDEALRQLKA--EIGAERSGLRV 57

Query: 68  KAVP----NYNSVVDGDKIVQTAL--ENFGRIDIVINNAGILRD--KSFARISDTDWQLV 119
             V         +    K ++     +   R+ ++INNAG L D  K F  +SD+  Q+ 
Sbjct: 58  VRVSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLGDVSKGFVDLSDST-QVQ 115

Query: 120 QDVHL-TGAFRVSRAAWPHMKKQNYG--RLVMTASNSGLLGNF-GQANYSAAKMALVGLS 175
               L   +     ++     K + G  R V+  S+   +  F G A Y A K A   L 
Sbjct: 116 NYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLF 175

Query: 176 NTLSIEGEKN 185
             L++E EKN
Sbjct: 176 QVLALE-EKN 184

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 10/159 (6%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           + +VTGA AG G        ++G  V+      +R  + K     +  +A++  +   A+
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61

Query: 71  PNYNSVVDGDKIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHLTGAFR 129
                    ++++ +    +  ID+++NNAG+ L  +   + S  DW+ + D +  G   
Sbjct: 62  ---------EEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVY 112

Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK 168
           ++RA  P M ++N+G ++   S +G     G   Y A K
Sbjct: 113 MTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATK 151

Length = 248

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 25/118 (21%)

Query: 14  VTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNY 73
           +TG+  GLG + A  L  +G  VV++    +R  D K                  A P  
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAK-----------------AACPGA 54

Query: 74  NSVVDGD--KIVQT-----ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
             V+ GD   + +T      +   GR D VI+NAGIL      +  DT    +  V++
Sbjct: 55  AGVLIGDLSSLAETRKLADQVNAIGRFDAVIHNAGILSGP-NRKTPDTGIPAMVAVNV 111

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 42/190 (22%), Positives = 72/190 (37%), Gaps = 21/190 (11%)

Query: 20  GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP-NYNSVVD 78
            +  + A   AE GA VV+          G   + A  + A++       +P +  S  D
Sbjct: 7   SIAWAIAKAAAEEGAEVVLTTWPPAL-RMGAVDELAKELPADV-------IPLDVTSDED 58

Query: 79  GDKIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHLTGAFR---VSRAA 134
            D++ +   E+ G+ID ++++  +    +      DT  +         A+    +++AA
Sbjct: 59  IDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAA 118

Query: 135 WPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVI- 192
            P M +   G +V   S       F G      AK AL  L+  L+ E  +  I  N I 
Sbjct: 119 KPLMNE--GGSIVAL-SYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTIS 175

Query: 193 ---VPTAASR 199
                T A  
Sbjct: 176 AGPTKTTAGS 185

Length = 239

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 32/109 (29%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAA-------DTV--V 59
           G+VA+V GA  G GR  A+ L   GA+V V          G+S++A        +T+   
Sbjct: 8   GKVALVAGATRGAGRGIAVELGAAGATVYVT---------GRSTRARRSEYDRPETIEET 58

Query: 60  AE-IRSKGGKAVPNYNSVVDGDKIVQTALENF--------GRIDIVINN 99
           AE + + GG+ +      V  D +V   +           GR+DI++N+
Sbjct: 59  AELVTAAGGRGIA-----VQVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 36/200 (18%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVV---------VNDLGGQRDGDGKSSKAADTVVA 60
           R  I+TG   GLG + A  L E+G  V+         +  L  Q + +          V 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           E+ +       N+N +     +     +N   I + INNAG++        ++++ +L+ 
Sbjct: 62  ELET-------NFNEI-----LSSIQEDNVSSIHL-INNAGMVAPIKPIEKAESE-ELIT 107

Query: 121 DVH--------LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
           +VH        LT  F      W   K     R++  +S +     FG + Y ++K  L 
Sbjct: 108 NVHLNLLAPMILTSTFMKHTKDWKVDK-----RVINISSGAAKNPYFGWSAYCSSKAGLD 162

Query: 173 GLSNTLSIEGEKNNIHCNVI 192
             + T++ E E+      ++
Sbjct: 163 MFTQTVATEQEEEEYPVKIV 182

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1205|consensus	282		100.0
KOG1201|consensus	300		100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1200|consensus	256		100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
KOG0725|consensus	270		100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
KOG1207|consensus	245		100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
KOG1610|consensus	322		100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
KOG1209|consensus	289		100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
KOG1014|consensus	312		100.0
KOG4169|consensus	261		100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
KOG1208|consensus	314		100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.98
PRK12746	254	short chain dehydrogenase; Provisional	99.98
PRK06123	248	short chain dehydrogenase; Provisional	99.98
PRK07060	245	short chain dehydrogenase; Provisional	99.98
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07577	234	short chain dehydrogenase; Provisional	99.98
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.98
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07201	657	short chain dehydrogenase; Provisional	99.98
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.98
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.98
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
KOG1611|consensus	249		99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
KOG1210|consensus	331		99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
KOG1199|consensus	260		99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.96
PRK07806	248	short chain dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.95
KOG1204|consensus	253		99.95
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.91
KOG1478|consensus	341		99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.87
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.84
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.82
PRK06720	169	hypothetical protein; Provisional	99.81
PLN02572	442	UDP-sulfoquinovose synthase	99.79
PLN02214	342	cinnamoyl-CoA reductase	99.78
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PLN00198	338	anthocyanidin reductase; Provisional	99.77
PLN02653	340	GDP-mannose 4,6-dehydratase	99.76
PLN02650	351	dihydroflavonol-4-reductase	99.76
PLN02583	297	cinnamoyl-CoA reductase	99.75
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.75
PLN02240	352	UDP-glucose 4-epimerase	99.75
KOG1502|consensus	327		99.74
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.74
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.73
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.72
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.69
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.69
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.68
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.68
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.68
PLN02686	367	cinnamoyl-CoA reductase	99.67
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.67
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.66
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.66
KOG4022|consensus	236		99.65
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.65
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.65
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.64
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.62
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.61
PLN02427	386	UDP-apiose/xylose synthase	99.6
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.6
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.59
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.57
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.57
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.55
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.54
PLN02206	442	UDP-glucuronate decarboxylase	99.53
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.53
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.52
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.51
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.51
KOG1371|consensus	343		99.5
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.5
PLN02260	668	probable rhamnose biosynthetic enzyme	99.5
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.48
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.48
PRK07201	657	short chain dehydrogenase; Provisional	99.4
PLN02778	298	3,5-epimerase/4-reductase	99.38
CHL00194	317	ycf39 Ycf39; Provisional	99.37
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.37
PLN02996	491	fatty acyl-CoA reductase	99.36
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.3
PRK05865	854	hypothetical protein; Provisional	99.29
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.25
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.25
KOG1430|consensus	361		99.24
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.23
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.21
KOG1202|consensus	2376		99.17
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.17
PLN02260	668	probable rhamnose biosynthetic enzyme	99.13
PLN02503	605	fatty acyl-CoA reductase 2	99.1
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.06
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.0
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.96
PLN00016	378	RNA-binding protein; Provisional	98.92
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.87
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.87
PRK08309	177	short chain dehydrogenase; Provisional	98.85
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.81
KOG0747|consensus	331		98.8
KOG1429|consensus	350		98.78
KOG1221|consensus	467		98.76
PRK12320	699	hypothetical protein; Provisional	98.67
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.66
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.59
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.56
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.5
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.5
KOG1203|consensus	411		98.42
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.41
KOG1431|consensus	315		98.36
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.24
PLN00106	323	malate dehydrogenase	98.22
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.18
PRK09620	229	hypothetical protein; Provisional	98.17
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.16
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.16
KOG4039|consensus	238		98.13
PRK14982	340	acyl-ACP reductase; Provisional	98.13
KOG2865|consensus	391		98.11
COG2910	211	Putative NADH-flavin reductase [General function p	98.07
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.01
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.95
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.89
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.88
KOG1372|consensus	376		97.79
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.71
PTZ00325	321	malate dehydrogenase; Provisional	97.67
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.64
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.63
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.62
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.62
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.59
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.57
KOG2774|consensus	366		97.54
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.5
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.48
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.4
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.39
KOG1198|consensus	347		97.39
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.31
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.28
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.27
PRK05086	312	malate dehydrogenase; Provisional	97.25
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.25
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.24
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.23
PRK06849	389	hypothetical protein; Provisional	97.2
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.2
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.2
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.19
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.17
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.16
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.16
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.12
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.1
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.09
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.09
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.08
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.05
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.03
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.03
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.02
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.95
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.92
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.9
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.86
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.84
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.84
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.81
COG3268	382	Uncharacterized conserved protein [Function unknow	96.79
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.77
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.76
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.73
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.73
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.72
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.71
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.69
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.67
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.66
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.65
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.62
PRK14968	188	putative methyltransferase; Provisional	96.62
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.61
KOG0023|consensus	360		96.59
KOG2733|consensus	423		96.53
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.53
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.5
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.5
KOG1196|consensus	343		96.47
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.43
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.42
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.4
PLN00203	519	glutamyl-tRNA reductase	96.38
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.34
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.34
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.34
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.31
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.31
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.29
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.28
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.28
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.27
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.26
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.22
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.21
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.14
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.13
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.13
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.12
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.11
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.09
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.09
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.09
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.02
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.01
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.99
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.97
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.95
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.95
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.94
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.94
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.93
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.93
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.93
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.91
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.9
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.9
PLN02740	381	Alcohol dehydrogenase-like	95.87
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.84
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.83
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.82
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.78
PRK05442	326	malate dehydrogenase; Provisional	95.77
PRK13243	333	glyoxylate reductase; Reviewed	95.76
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.73
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.73
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.71
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.7
KOG4288|consensus	283		95.7
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.68
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.67
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.67
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.66
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.63
PRK08223	287	hypothetical protein; Validated	95.61
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.59
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.58
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.55
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.55
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.5
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.48
PLN02602	350	lactate dehydrogenase	95.47
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.47
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.42
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.42
PTZ00354	334	alcohol dehydrogenase; Provisional	95.41
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.41
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.41
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.34
PTZ00117	319	malate dehydrogenase; Provisional	95.32
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.3
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.29
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.27
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.26
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.25
PRK08655	437	prephenate dehydrogenase; Provisional	95.24
PLN02827	378	Alcohol dehydrogenase-like	95.23
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.23
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.22
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.22
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.17
PRK08328	231	hypothetical protein; Provisional	95.17
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.14
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.1
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.08
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.03
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.03
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.03
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.02
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.98
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.97
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.96
PRK04148	134	hypothetical protein; Provisional	94.92
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.92
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.9
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.88
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.87
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.85
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.84
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.82
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.76
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	94.75
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.74
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.74
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.73
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.7
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.66
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.66
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.65
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.64
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.6
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.58
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.55
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.54
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	94.53

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=7.1e-44  Score=269.13  Aligned_cols=194  Identities=28%  Similarity=0.397  Sum_probs=181.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++|+++|||||+|||.++|+.|+++|++|++++|         ..++++++..++.+ .......|++|..+++++++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR---------R~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~   73 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAAR---------REERLEALADEIGAGAALALALDVTDRAAVEAAIE   73 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec---------cHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHH
Confidence            567899999999999999999999999999999987         88889999888874 34455679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      .+.++|+++|+||||||.....++.+.+.++|+.|+++|+.|.++.+++++|.|.+++.|.||++||.++.++.|+...|
T Consensus        74 ~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY  153 (246)
T COG4221          74 ALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVY  153 (246)
T ss_pred             HHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccc
Confidence            99999999999999999998899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCCC
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPPG  208 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~~  208 (223)
                      +++|+++.+|++.|+.|+..++|||.+|.||.+ ++.+...-.++
T Consensus       154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g  198 (246)
T COG4221         154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG  198 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc
Confidence            999999999999999999999999999999999 88777766553

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.6e-42  Score=267.60  Aligned_cols=188  Identities=22%  Similarity=0.340  Sum_probs=177.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC----CccccccCCccchHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----GKAVPNYNSVVDGDK   81 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~   81 (223)
                      .++++++||||||+|||+++|++|+++|++|++++|         ++++++++.++++...    ..+.+|+++.++++.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR---------~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~   73 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVAR---------REDKLEALAKELEDKTGVEVEVIPADLSDPEALER   73 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------cHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHH
Confidence            356889999999999999999999999999999988         9999999999998765    244669999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +.+++.++.+.||+||||||+...+++.+.+.++.++++++|+.++..|++.++|.|.+++.|.||+|+|.++..+.|..
T Consensus        74 l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~  153 (265)
T COG0300          74 LEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM  153 (265)
T ss_pred             HHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch
Confidence            99999998899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|++||+++.+|+++|+.|+.++||+|.+|+||++ |++.+
T Consensus       154 avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         154 AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence            999999999999999999999999999999999999 87775

>KOG1205|consensus

Probab=100.00  E-value=6.3e-42  Score=267.32  Aligned_cols=192  Identities=31%  Similarity=0.409  Sum_probs=170.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-----CccccccCCccc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPNYNSVVD   78 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   78 (223)
                      +.+++||+|+|||||+|||.++|.+|+++|++++++.|         ...+++.+.+++++.+     ..+.+|++|.++
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar---------~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~   77 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVAR---------RARRLERVAEELRKLGSLEKVLVLQLDVSDEES   77 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeeh---------hhhhHHHHHHHHHHhCCcCccEEEeCccCCHHH
Confidence            35688999999999999999999999999999999877         4555555555555433     334579999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++++++.+.+.||++|+||||||..........+.+++...+++|++|++.+++.++|+|++++.|+||++||++|..+.
T Consensus        78 ~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   78 VKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL  157 (282)
T ss_pred             HHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence            99999999999999999999999988777788999999999999999999999999999999989999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCC--eEEEEEeCCCc-ccccccCC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNN--IHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |....|++||+|+.+|+++|+.|+.+.+  |++ +|+||+| |++.....
T Consensus       158 P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  158 PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence            9999999999999999999999999877  666 9999999 77665544

>KOG1201|consensus

Probab=100.00  E-value=7.8e-40  Score=253.47  Aligned_cols=190  Identities=32%  Similarity=0.504  Sum_probs=174.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   82 (223)
                      .+.+|++||||||++|||+++|.+|+++|+++++.|.         +....++..++++..  ...+.+|+++.+++...
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Di---------n~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~  104 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDI---------NKQGNEETVKEIRKIGEAKAYTCDISDREEIYRL  104 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEec---------cccchHHHHHHHHhcCceeEEEecCCCHHHHHHH
Confidence            4578999999999999999999999999999999988         555566666666643  33467799999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      .+++.+++|++|+||||||+...+++.+.+.+++++++++|+.|.+..+++|+|.|.+.+.|+||.++|.+|..+.++..
T Consensus       105 a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~  184 (300)
T KOG1201|consen  105 AKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLA  184 (300)
T ss_pred             HHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhC---CCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGE---KNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +|++||+|+.+|+++|..|+.   ..||+...|+|+++ |.+...
T Consensus       185 ~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  185 DYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            999999999999999999986   46899999999999 777776

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-39  Score=255.27  Aligned_cols=189  Identities=23%  Similarity=0.319  Sum_probs=167.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C---CccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G---GKAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~   80 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++... +   ..+..|++|..+++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~   74 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSR---------NEENLKKAREKIKSESNVDVSYIVADLTKREDLE   74 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHH
Confidence            4688999999999999999999999999999999987         555566666555432 2   23466999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++. +++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        75 ~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~  153 (263)
T PRK08339         75 RTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPN  153 (263)
T ss_pred             HHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCc
Confidence            9999885 689999999999987777788899999999999999999999999999999887899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|+++|+|+.+|+++|+.|++++||+||+|+||+| |++..+
T Consensus       154 ~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  197 (263)
T PRK08339        154 IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQ  197 (263)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHH
Confidence            9999999999999999999999999999999999999 776543

>KOG1200|consensus

Probab=100.00  E-value=3e-40  Score=239.32  Aligned_cols=192  Identities=33%  Similarity=0.508  Sum_probs=172.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +..|+++||||++|||+++++.|+++|++|++.++         +....++....+..  ....+.+|+++..+++..++
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl---------~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~   82 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADL---------DSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLE   82 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeec---------chhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHH
Confidence            56789999999999999999999999999999987         55566666677766  33355679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh--cCCCcEEEEecCcccccCCCCc
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK--QNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      +..+.+|++++||||||+..+..+..+..++|++.+.+|+.|.|.+++.+...|..  +...+||++||+-+..+..++.
T Consensus        83 e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQt  162 (256)
T KOG1200|consen   83 EMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQT  162 (256)
T ss_pred             HHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccch
Confidence            99999999999999999999888899999999999999999999999999998543  3345999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      .|+++|+++.+|+|+.++|+++++||||.|.||++ |+|++.+.|+
T Consensus       163 nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~  208 (256)
T KOG1200|consen  163 NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK  208 (256)
T ss_pred             hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH
Confidence            99999999999999999999999999999999999 8888776653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-39  Score=255.99  Aligned_cols=187  Identities=16%  Similarity=0.214  Sum_probs=159.5

Q ss_pred             ccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++|++|||||+  +|||+++|+.|+++|++|++++|+.      +..+..++..+++... ..+.+|++|.+++++++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~------~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~   74 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE------ALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLA   74 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH------HHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHH
Confidence            4679999999997  8999999999999999999998721      0112233332222211 34567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         84 QTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|.++  |+||++||.++..+.+
T Consensus        75 ~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~  152 (274)
T PRK08415         75 ESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKYVP  152 (274)
T ss_pred             HHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccCCC
Confidence            9999999999999999997642    567889999999999999999999999999999764  8999999999998889


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      +...|++||+|+.+|+++|+.|++++||+||+|+||+| |++.
T Consensus       153 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~  195 (274)
T PRK08415        153 HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAA  195 (274)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence            99999999999999999999999999999999999999 6543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-38  Score=251.70  Aligned_cols=185  Identities=15%  Similarity=0.168  Sum_probs=158.6

Q ss_pred             ccCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH-HhC--CccccccCCccchH
Q psy16220          6 RFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKG--GKAVPNYNSVVDGD   80 (223)
Q Consensus         6 ~~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~   80 (223)
                      .+++|++|||||++  |||+++|++|+++|++|++++|         +....+. .+++. +.+  ..+.+|++|.++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r---------~~~~~~~-~~~~~~~~g~~~~~~~Dv~d~~~v~   73 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQ---------GEALGKR-VKPLAESLGSDFVLPCDVEDIASVD   73 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecC---------chHHHHH-HHHHHHhcCCceEEeCCCCCHHHHH
Confidence            36899999999996  9999999999999999999877         2221111 12221 112  23567999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+++++.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||.++..
T Consensus        74 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~  151 (271)
T PRK06505         74 AVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTR  151 (271)
T ss_pred             HHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccc
Confidence            9999999999999999999997643    46778999999999999999999999999999974  38999999999988


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +.|++.+|+++|+|+.+|+++|+.|++++||+||+|+||++ |++..
T Consensus       152 ~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~  198 (271)
T PRK06505        152 VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA  198 (271)
T ss_pred             cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc
Confidence            99999999999999999999999999999999999999999 76543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-38  Score=250.33  Aligned_cols=189  Identities=32%  Similarity=0.481  Sum_probs=164.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|+         ..  +...+.+.+.+   ..+..|++|.+++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~---------~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA---------EA--PETQAQVEALGRKFHFITADLIQQKDIDS   72 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc---------hH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHH
Confidence            56889999999999999999999999999999998762         11  12222333222   235679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+.++
T Consensus        73 ~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~  152 (251)
T PRK12481         73 IVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR  152 (251)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC
Confidence            9999999999999999999988777888899999999999999999999999999998654 589999999999999899


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ...|++||+++++|+++++.|++++||+||+|+||++ |++....
T Consensus       153 ~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~  197 (251)
T PRK12481        153 VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL  197 (251)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc
Confidence            9999999999999999999999999999999999999 7766543

>KOG0725|consensus

Probab=100.00  E-value=6e-38  Score=247.91  Aligned_cols=188  Identities=35%  Similarity=0.508  Sum_probs=166.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc------cccccCCcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK------AVPNYNSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~   77 (223)
                      ...+++|++||||+++|||+++|++|++.|++|++++|         +++..++..+++...+..      +.+|+.+.+
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   73 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGR---------SEERLEETAQELGGLGYTGGKVLAIVCDVSKEV   73 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH
Confidence            35789999999999999999999999999999999988         777777777776654443      566888888


Q ss_pred             chHHHHHHHHHh-cCCccEEEeccCCCCCC-CCCCCCHHHHHHHHHhhhh-HHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         78 DGDKIVQTALEN-FGRIDIVINNAGILRDK-SFARISDTDWQLVQDVHLT-GAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        78 ~~~~~~~~~~~~-~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      +.+++++...++ +|++|+||||||..... ++.+.+.++|++++++|+. +.+.+.+.+.+++++.+.|.|+++||.++
T Consensus        74 ~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~  153 (270)
T KOG0725|consen   74 DVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAG  153 (270)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccc
Confidence            999999999888 79999999999988754 7899999999999999999 57777888888888878899999999999


Q ss_pred             cccCCCC-chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        155 LLGNFGQ-ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       155 ~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ..+.++. .+|+++|+|+++|+|++|.|++++|||||+|+||++ |++
T Consensus       154 ~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  154 VGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             ccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            8876666 899999999999999999999999999999999999 766

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-38  Score=249.09  Aligned_cols=194  Identities=18%  Similarity=0.196  Sum_probs=164.3

Q ss_pred             CCCccccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccc
Q psy16220          1 MPEQVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVD   78 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (223)
                      |...++++||++|||||+  +|||+++|++|+++|++|++++|+..      ..+..+++.+++.. ...+.+|++|.++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~------~~~~~~~~~~~~~~-~~~~~~D~~~~~~   74 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK------ARPYVEPLAEELDA-PIFLPLDVREPGQ   74 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh------hHHHHHHHHHhhcc-ceEEecCcCCHHH
Confidence            455677899999999998  59999999999999999999987311      11223333333321 2345679999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      ++++++.+.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||..+
T Consensus        75 v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~  152 (258)
T PRK07533         75 LEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGA  152 (258)
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEecccc
Confidence            999999999999999999999997642    46678899999999999999999999999999964  389999999998


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..+.++...|+++|+|+.+|+++|+.|++++||+||+|+||++ |++..+
T Consensus       153 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        153 EKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG  202 (258)
T ss_pred             ccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc
Confidence            8888999999999999999999999999999999999999999 777543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=7.9e-38  Score=247.64  Aligned_cols=189  Identities=19%  Similarity=0.201  Sum_probs=160.9

Q ss_pred             cccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   79 (223)
                      +++++|+++||||+  +|||+++|++|+++|++|++.+|+...       .+.++..+++.+..   ..+.+|++|.+++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v   74 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEK-------GRFEKKVRELTEPLNPSLFLPCDVQDDAQI   74 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCccc-------chHHHHHHHHHhccCcceEeecCcCCHHHH
Confidence            46789999999986  899999999999999999988763211       11222333333322   2456799999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      +++++++.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+.
T Consensus        75 ~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g~Iv~isS~~~~  152 (258)
T PRK07370         75 EETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--GSIVTLTYLGGV  152 (258)
T ss_pred             HHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--CeEEEEeccccc
Confidence            99999999999999999999997642    567888999999999999999999999999999753  899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+.++...|++||+|+.+|+++|+.|++++||+||+|+||++ |++..
T Consensus       153 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~  200 (258)
T PRK07370        153 RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASS  200 (258)
T ss_pred             cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhh
Confidence            999999999999999999999999999999999999999999 76543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-38  Score=248.26  Aligned_cols=186  Identities=17%  Similarity=0.164  Sum_probs=160.4

Q ss_pred             ccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|         +. +..+..+++.. ....+.+|++|.++++++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r---------~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   73 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ---------ND-RMKKSLQKLVDEEDLLVECDVASDESIERA   73 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC---------ch-HHHHHHHhhccCceeEEeCCCCCHHHHHHH
Confidence            3689999999999  89999999999999999999987         32 22222233322 223456799999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         83 VQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++++.++++++|+||||||....    .++.+.+.++|+..+++|+.+++.+++.++|+|.+  .|+||++||..+..+.
T Consensus        74 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~  151 (252)
T PRK06079         74 FATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAI  151 (252)
T ss_pred             HHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccC
Confidence            99999999999999999997643    57788999999999999999999999999999965  3899999999998898


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|+++|+|+.+|+++|+.|++++||+||+|+||+| |++..+
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        152 PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc
Confidence            999999999999999999999999999999999999999 776543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.1e-38  Score=248.56  Aligned_cols=190  Identities=18%  Similarity=0.154  Sum_probs=162.9

Q ss_pred             ccccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   80 (223)
                      ++++++|+++||||+  +|||+++|++|+++|++|++++|+.      ++...++++.+++.. ....+.+|++|.++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   75 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE------RLEKEVRELADTLEGQESLLLPCDVTSDEEIT   75 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc------cchHHHHHHHHHcCCCceEEEecCCCCHHHHH
Confidence            356889999999997  8999999999999999999998731      233444444444421 1223567999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILR----DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      ++++++.++++++|+||||||...    ..++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||..+..
T Consensus        76 ~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~  153 (257)
T PRK08594         76 ACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGER  153 (257)
T ss_pred             HHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCcc
Confidence            999999999999999999999764    256678899999999999999999999999999965  38999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      +.++..+|++||+|+.+|+++|+.|++++||+||+|+||++ |++.
T Consensus       154 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~  199 (257)
T PRK08594        154 VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSA  199 (257)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhH
Confidence            99999999999999999999999999999999999999999 7654

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-37  Score=247.18  Aligned_cols=190  Identities=34%  Similarity=0.483  Sum_probs=169.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCC---ccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGG---KAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~   79 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++..  .+.   .+.+|++|..++
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   73 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADL---------DAALAERAAAAIARDVAGARVLAVPADVTDAASV   73 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhccCCceEEEEEccCCCHHHH
Confidence            3578999999999999999999999999999999987         55666666666654  122   345688888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +.+++++.++++++|+||||||.....+..+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.+
T Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  153 (260)
T PRK07063         74 AAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP  153 (260)
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC
Confidence            99999999999999999999998766677788999999999999999999999999999887779999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +..+|+++|+++++++++|+.|++++||+||+|+||++ |++..+
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~  198 (260)
T PRK07063        154 GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTED  198 (260)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhh
Confidence            99999999999999999999999999999999999999 777554

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2.5e-37  Score=248.33  Aligned_cols=187  Identities=20%  Similarity=0.222  Sum_probs=153.7

Q ss_pred             cccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH----------hC------
Q psy16220          5 VRFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----------KG------   66 (223)
Q Consensus         5 ~~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~----------~~------   66 (223)
                      ++++||++|||||  ++|||+++|+.|+++|++|++ +|         +...++.+...+..          .+      
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~---------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GT---------WVPALNIFETSLRRGKFDESRKLPDGSLMEIT   74 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-Ee---------CcchhhHHHHhhhccccchhhhcccccccCcC
Confidence            4589999999999  899999999999999999998 55         22333333222221          01      


Q ss_pred             Ccccccc--CCc------------------cchHHHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhh
Q psy16220         67 GKAVPNY--NSV------------------VDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHL  124 (223)
Q Consensus        67 ~~~~~~~--~~~------------------~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~  124 (223)
                      ..+.+|+  .+.                  .+++.+++++.+.+|++|+||||||...  ..++.+.+.++|++++++|+
T Consensus        75 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~  154 (303)
T PLN02730         75 KVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASS  154 (303)
T ss_pred             eeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHh
Confidence            1233455  222                  2678999999999999999999998543  36888999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-chhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-cccc
Q psy16220        125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ-ANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       125 ~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~  201 (223)
                      .+++.+++.++|+|.++  |+||++||..+..+.++. ..|++||+|+.+|+++|+.|+++ +||+||+|+||++ |++.
T Consensus       155 ~~~~~l~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~  232 (303)
T PLN02730        155 YSFVSLLQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA  232 (303)
T ss_pred             HHHHHHHHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence            99999999999999764  999999999998888866 48999999999999999999986 7999999999999 7776


Q ss_pred             cc
Q psy16220        202 ED  203 (223)
Q Consensus       202 ~~  203 (223)
                      ..
T Consensus       233 ~~  234 (303)
T PLN02730        233 KA  234 (303)
T ss_pred             hc
Confidence            54

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-37  Score=243.03  Aligned_cols=189  Identities=26%  Similarity=0.328  Sum_probs=169.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   79 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +..+.++..+++.....     .+..|++|.+++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   74 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGR---------DEERLASAEARLREKFPGARLLAARCDVLDEADV   74 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHH
Confidence            4688999999999999999999999999999999988         55555555555554321     345699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++++++.+.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++.+.|+||++||..+..+.+
T Consensus        75 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  154 (265)
T PRK07062         75 AAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP  154 (265)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC
Confidence            99999999999999999999998777788889999999999999999999999999999987779999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +...|+++|+++.+++++|+.|++++||+||+|+||++ |++..
T Consensus       155 ~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  198 (265)
T PRK07062        155 HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWR  198 (265)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhh
Confidence            99999999999999999999999999999999999999 77654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5e-37  Score=243.33  Aligned_cols=184  Identities=16%  Similarity=0.168  Sum_probs=158.1

Q ss_pred             ccCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C--CccccccCCccchH
Q psy16220          6 RFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G--GKAVPNYNSVVDGD   80 (223)
Q Consensus         6 ~~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~   80 (223)
                      .+++|++|||||++  |||+++|+.|+++|++|++.+|         +. ..++..+++... +  ..+.+|++|.++++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r---------~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~   74 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQ---------SE-VLEKRVKPLAEEIGCNFVSELDVTNPKSIS   74 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeC---------ch-HHHHHHHHHHHhcCCceEEEccCCCHHHHH
Confidence            36789999999997  9999999999999999999876         32 122223333322 2  23467999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+++++.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.+.|+|++  .|+||++||..+..
T Consensus        75 ~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~  152 (260)
T PRK06603         75 NLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEK  152 (260)
T ss_pred             HHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCcccc
Confidence            9999999999999999999997542    46778899999999999999999999999999964  38999999999988


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      +.++...|++||+|+.+|+++|+.|++++||+||+|+||++ |++.
T Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~  198 (260)
T PRK06603        153 VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLAS  198 (260)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhh
Confidence            88999999999999999999999999999999999999999 7654

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-37  Score=247.77  Aligned_cols=200  Identities=20%  Similarity=0.190  Sum_probs=163.5

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCC-CCChhhhhHHHHHHHHhCC---ccccccCCccc
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGD-GKSSKAADTVVAEIRSKGG---KAVPNYNSVVD   78 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   78 (223)
                      ++.++++|++|||||++|||+++|+.|+++|++|++++|+...... ....+..++..++++..+.   .+.+|+.|.++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            3456889999999999999999999999999999999885322100 0012334444555554332   34679999999


Q ss_pred             hHHHHHHHHHhcCCccEEEecc-CCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         79 GDKIVQTALENFGRIDIVINNA-GILR----DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      ++++++++.+.++++|+||||| |...    ..++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 7431    2567778899999999999999999999999999877669999999976


Q ss_pred             ccc---cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        154 GLL---GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       154 ~~~---~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +..   +.++...|++||+|+.+|+++|+.|++++||+||+|+||+| |++..
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML  214 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence            643   33457789999999999999999999999999999999999 87654

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-37  Score=245.00  Aligned_cols=197  Identities=42%  Similarity=0.647  Sum_probs=167.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++++.......++....++..+++...+.   .+.+|++|.++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            36899999999999999999999999999999998743211111223455566666655443   345699999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCcEEEEecCcccc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLL  156 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~vsS~~~~~  156 (223)
                      ++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+..      .|+||++||.++..
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  162 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ  162 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence            999999999999999999987777888999999999999999999999999999997542      37999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTE  202 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~  202 (223)
                      +.++...|++||+|+++|+++|+.|++++||+||+|+||..|++..
T Consensus       163 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg~~T~~~~  208 (286)
T PRK07791        163 GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPAARTRMTE  208 (286)
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCCCCCCcch
Confidence            9999999999999999999999999999999999999993276654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8e-37  Score=242.19  Aligned_cols=183  Identities=11%  Similarity=0.095  Sum_probs=155.2

Q ss_pred             cCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   81 (223)
                      ++||++|||||++  |||+++|+.|+++|++|++++|         +. ..++..+++....   ..+.+|++|.+++++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r---------~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   73 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ---------ND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDA   73 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEec---------ch-hHHHHHHHHHhccCCceEeecCCCCHHHHHH
Confidence            6899999999986  9999999999999999999876         21 2222233333322   235679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCC-----CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKS-----FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      +++++.+.++++|+||||||.....+     +.+.+.++|++++++|+.+++.+++.+.|.+.+  .|+||++||..+..
T Consensus        74 ~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~  151 (262)
T PRK07984         74 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAER  151 (262)
T ss_pred             HHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCC
Confidence            99999999999999999999754322     556789999999999999999999999987653  38999999999888


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      +.++...|++||+|+.+|+++|+.|++++||+||+|+||++ |++.
T Consensus       152 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~  197 (262)
T PRK07984        152 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  197 (262)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHH
Confidence            88999999999999999999999999999999999999999 6543

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.4e-36  Score=242.30  Aligned_cols=188  Identities=28%  Similarity=0.486  Sum_probs=166.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|+.|+++|++|++++|         + ...++..+++.+.+   ..+.+|+++..+++.+
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r---------~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   72 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDI---------A-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDF   72 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------c-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHH
Confidence            478999999999999999999999999999999987         4 44555555665433   2456789999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|+||||||... ..++.+.+.+.|++++++|+.+++.+++.++|+|++.+ |+||++||..+..+.++.
T Consensus        73 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  151 (272)
T PRK08589         73 ASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYR  151 (272)
T ss_pred             HHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCC
Confidence            9999999999999999999864 35677889999999999999999999999999998765 899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..|++||+|+++|+++++.|++++||+||+|+||+| |++..+.
T Consensus       152 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  195 (272)
T PRK08589        152 SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKL  195 (272)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhh
Confidence            999999999999999999999999999999999999 7776543

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=240.12  Aligned_cols=190  Identities=35%  Similarity=0.530  Sum_probs=167.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +..+.++..+++...+.   .+.+|+.+.+++++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR---------RQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKA   72 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            4678999999999999999999999999999999987         55566666666655433   34568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNF  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~  159 (223)
                      +++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+. .+.+
T Consensus        73 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~  152 (254)
T PRK07478         73 LVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFP  152 (254)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCC
Confidence            99999999999999999999764 367778899999999999999999999999999988877899999998886 5788


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|++||++++.++++|+.|++++||+||+|+||++ |++...
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  197 (254)
T PRK07478        153 GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRA  197 (254)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccc
Confidence            89999999999999999999999999999999999999 776544

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-37  Score=247.65  Aligned_cols=194  Identities=27%  Similarity=0.429  Sum_probs=171.5

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccccccCCccc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAVPNYNSVVD   78 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (223)
                      |+.+.+++||++|||||++|||+++|++|+++|++|++++|         +...++++.+++.....  .+.+|++|.++
T Consensus         1 ~~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~   71 (296)
T PRK05872          1 GPPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDL---------EEAELAALAAELGGDDRVLTVVADVTDLAA   71 (296)
T ss_pred             CCCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcCCCcEEEEEecCCCHHH
Confidence            44556789999999999999999999999999999999987         66666666666542111  22379999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++.+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.. |+||++||..+..+.
T Consensus        72 v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~  150 (296)
T PRK05872         72 MQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-GYVLQVSSLAAFAAA  150 (296)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHhhcCCC
Confidence            9999999999999999999999998778888999999999999999999999999999987753 899999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++...|++||+++++|+++|+.|++++||+|++|+||++ |++..+.
T Consensus       151 ~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  197 (296)
T PRK05872        151 PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA  197 (296)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence            999999999999999999999999999999999999999 7776553

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-37  Score=243.83  Aligned_cols=190  Identities=15%  Similarity=0.152  Sum_probs=158.0

Q ss_pred             ccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++|++|||||  ++|||+++|+.|+++|++|++++|.      .+..+..+++.++.. ....+.+|++|.+++++++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~   75 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVV------DKLEERVRKMAAELD-SELVFRCDVASDDEINQVF   75 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc------HHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHH
Confidence            378999999997  6799999999999999999998762      112222222222211 1124567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCC----C-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         84 QTALENFGRIDIVINNAGILRDK----S-FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      +.+.++++++|+||||||.....    + +.+.+.++|+.++++|+.+++.+++.++|.|++++ |+||++||..+..+.
T Consensus        76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~~  154 (261)
T PRK08690         76 ADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRAI  154 (261)
T ss_pred             HHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccCC
Confidence            99999999999999999986432    2 35678889999999999999999999999997654 899999999998899


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|+++|+|+.+|+++|+.|++++||+||+|+||+| |++..+
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG  200 (261)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc
Confidence            999999999999999999999999999999999999999 766543

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=245.89  Aligned_cols=190  Identities=28%  Similarity=0.349  Sum_probs=171.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +...+++..+++++.+..   +.+|++|.+++++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R---------~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~   73 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAAR---------DEEALQAVAEECRALGAEVLVVPTDVTDADQVKA   73 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Confidence            4578999999999999999999999999999999987         667777777777655443   3568889899999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|++|||||....+++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.|+.
T Consensus        74 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~  153 (330)
T PRK06139         74 LATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYA  153 (330)
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCc
Confidence            99999888899999999999888788899999999999999999999999999999998877999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCC-CeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKN-NIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~-~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|++||+++.+|+++|+.|+.+. ||+|++|+||++ |++..+
T Consensus       154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~  197 (330)
T PRK06139        154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH  197 (330)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence            999999999999999999999874 999999999999 776543

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-37  Score=243.19  Aligned_cols=187  Identities=14%  Similarity=0.143  Sum_probs=156.6

Q ss_pred             ccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++|++|||||  ++|||+++|++|+++|++|++++|.      .++.+.++++.+++.. ...+.+|++|.+++++++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~   75 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG------DRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALF   75 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc------hHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHH
Confidence            468999999996  6899999999999999999998652      1123333333222211 123567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCC----C-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         84 QTALENFGRIDIVINNAGILRDK----S-FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      +.+.++++++|+||||||.....    + +.+.+.++|++.+++|+.+++.+++.++|+|.+  .|+||++||..+..+.
T Consensus        76 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~  153 (260)
T PRK06997         76 ASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVV  153 (260)
T ss_pred             HHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCC
Confidence            99999999999999999976432    2 346788999999999999999999999999953  3899999999998888


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ++...|++||+|+.+|+++|+.|++++||+||+|+||++ |++.
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~  197 (260)
T PRK06997        154 PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAA  197 (260)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchh
Confidence            999999999999999999999999999999999999999 6544

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8e-37  Score=243.56  Aligned_cols=186  Identities=16%  Similarity=0.190  Sum_probs=158.2

Q ss_pred             cCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++|++|||||+  +|||+++|+.|+++|++|++++|+.      +..+..+++.+++.. ...+.+|++|..+++.+++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~------~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~   80 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD------ALKKRVEPLAAELGA-FVAGHCDVTDEASIDAVFE   80 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch------HHHHHHHHHHHhcCC-ceEEecCCCCHHHHHHHHH
Confidence            578999999997  8999999999999999999987620      112333333333211 2246679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         85 TALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|.+.  |+||++||.++..+.|+
T Consensus        81 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~Iv~iss~~~~~~~p~  158 (272)
T PRK08159         81 TLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG--GSILTLTYYGAEKVMPH  158 (272)
T ss_pred             HHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--ceEEEEeccccccCCCc
Confidence            999999999999999997642    567788999999999999999999999999998643  89999999988888999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ...|++||+|+.+|+++|+.|++++||+||+|+||++ |++.
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~  200 (272)
T PRK08159        159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAA  200 (272)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHH
Confidence            9999999999999999999999999999999999999 6554

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-36  Score=240.83  Aligned_cols=189  Identities=31%  Similarity=0.509  Sum_probs=169.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++|         +....++..++++..+..   +.+|++|.++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r---------~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   73 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDV---------DKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHL   73 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            478999999999999999999999999999999987         555666666666654432   45689999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++.
T Consensus        74 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~  153 (275)
T PRK05876         74 ADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL  153 (275)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCC
Confidence            999999999999999999988778888999999999999999999999999999998764 5899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+++|+++.+|+++|+.|++++||+|++|+||++ |++..+
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence            999999999999999999999999999999999999 766543

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=238.55  Aligned_cols=193  Identities=32%  Similarity=0.487  Sum_probs=167.3

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVD   78 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   78 (223)
                      |..+++++|++|||||++|||+++|++|+++|++|++++|+        .+...++..+++...+.   .+..|+.|.++
T Consensus         1 ~~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~--------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~   72 (254)
T PRK06114          1 PQLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLR--------TDDGLAETAEHIEAAGRRAIQIAADVTSKAD   72 (254)
T ss_pred             CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC--------cchHHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            44567899999999999999999999999999999999873        12233444555554332   34668999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++.+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||.++..+.
T Consensus        73 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (254)
T PRK06114         73 LRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN  152 (254)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC
Confidence            99999999999999999999999877777888999999999999999999999999999988777999999999888766


Q ss_pred             CC--CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        159 FG--QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       159 ~~--~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++  ...|+++|+|+++++++++.|++++||+||+|+||++ |++..
T Consensus       153 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~  199 (254)
T PRK06114        153 RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT  199 (254)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence            54  6899999999999999999999999999999999999 77654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=238.84  Aligned_cols=193  Identities=30%  Similarity=0.446  Sum_probs=170.8

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccch
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDG   79 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   79 (223)
                      .-+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.   .+.+|++|.+++
T Consensus         3 ~~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~   73 (254)
T PRK08085          3 DLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDI---------TAERAELAVAKLRQEGIKAHAAPFNVTHKQEV   73 (254)
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHHHHhcCCeEEEEecCCCCHHHH
Confidence            345688999999999999999999999999999999987         55556666666654332   345689999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +.+++.+.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+.+.+.+++.++||++||..+..+.+
T Consensus        74 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  153 (254)
T PRK08085         74 EAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD  153 (254)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC
Confidence            99999999999999999999998776778889999999999999999999999999999877779999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +...|+++|+++++++++++.|++++||++|+|+||++ |++....
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~  199 (254)
T PRK08085        154 TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL  199 (254)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh
Confidence            99999999999999999999999999999999999999 7766543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-36  Score=240.10  Aligned_cols=187  Identities=16%  Similarity=0.184  Sum_probs=157.5

Q ss_pred             ccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+.       +.+..++..+++......+.+|++|.+++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~   76 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR-------ALRLTERIAKRLPEPAPVLELDVTNEEHLASLA   76 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc-------chhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHH
Confidence            478999999999  89999999999999999999998721       123333444444333345678999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         84 QTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|+++  |+||++|+. +..+.+
T Consensus        77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~--g~Iv~is~~-~~~~~~  153 (256)
T PRK07889         77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG--GSIVGLDFD-ATVAWP  153 (256)
T ss_pred             HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC--ceEEEEeec-ccccCC
Confidence            9999999999999999998643    356778899999999999999999999999999753  899999875 345667


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+..|++||+|+.+|+++|+.|++++||+||+|+||++ |++..
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~  197 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAK  197 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhh
Confidence            88889999999999999999999999999999999999 76654

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=238.57  Aligned_cols=190  Identities=28%  Similarity=0.425  Sum_probs=164.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..++++..+.   .+..|+.|.++++.
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   75 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAAR---------HLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTS   75 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            3578999999999999999999999999999999987         55566666666655443   34568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccC-C
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGN-F  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~-~  159 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+. +
T Consensus        76 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  155 (253)
T PRK05867         76 MLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP  155 (253)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC
Confidence            9999999999999999999988777888899999999999999999999999999997654 4789999998776543 3


Q ss_pred             -CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 -GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 -~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                       +...|+++|+|+++|+++++.|++++||+||+|+||+| |++..+
T Consensus       156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~  201 (253)
T PRK05867        156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP  201 (253)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc
Confidence             45789999999999999999999999999999999999 776543

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-36  Score=232.73  Aligned_cols=182  Identities=17%  Similarity=0.196  Sum_probs=158.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      ++++|+++||||++|||+++|++|+++|++|++++|         +....++..+++.+.+..   +.+|+.|.++++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r---------~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~   72 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQ---------DQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHL   72 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHH
Confidence            578999999999999999999999999999999987         666666666666554432   34688888889999


Q ss_pred             HHHHHHhcC-CccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCC
Q psy16220         83 VQTALENFG-RIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNF  159 (223)
Q Consensus        83 ~~~~~~~~~-~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~  159 (223)
                      ++++.++++ ++|++|||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|+||++||..+.   +
T Consensus        73 ~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~  149 (227)
T PRK08862         73 FDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---Q  149 (227)
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---C
Confidence            999999998 999999999854 345788889999999999999999999999999998653 6899999997543   5


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      +...|+++|+|+.+|+++|+.|++++||+||+|+||++ |+
T Consensus       150 ~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        150 DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            67889999999999999999999999999999999999 65

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=239.86  Aligned_cols=191  Identities=17%  Similarity=0.228  Sum_probs=165.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C---CccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G---GKAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~   80 (223)
                      .++++|++|||||++|||+++|+.|+++|++|++++|.        +.+..+...++++.. +   ..+.+|++|.++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   75 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS--------NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYK   75 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            46789999999999999999999999999999988652        444455555555432 2   24567999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCC------CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILR------DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      ++++++.++++++|+||||||...      ..++.+.+.++|+.++++|+.+++.+++.++|.|.+.+.|+||++||..+
T Consensus        76 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  155 (260)
T PRK08416         76 ELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGN  155 (260)
T ss_pred             HHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccc
Confidence            999999999999999999998642      24567788999999999999999999999999998877789999999998


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..+.++...|++||+++++++++|+.|++++||+||+|+||++ |++...
T Consensus       156 ~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~  205 (260)
T PRK08416        156 LVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA  205 (260)
T ss_pred             ccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh
Confidence            8889999999999999999999999999999999999999999 776543

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=239.42  Aligned_cols=188  Identities=28%  Similarity=0.419  Sum_probs=163.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|+.|.++++++++.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   73 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDI---------DADNGAAVAASLGERARFIATDITDDAAIERAVAT   73 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987         44445554444432333456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++++++|+||||||...... .+.+.++|++.+++|+.+++.+++.++|.|. ++.|+||++||.++..+.++...|+
T Consensus        74 ~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~  151 (261)
T PRK08265         74 VVARFGRVDILVNLACTYLDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYP  151 (261)
T ss_pred             HHHHhCCCCEEEECCCCCCCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhH
Confidence            9999999999999999765433 3568899999999999999999999999997 5568999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++|+++.+++++++.|++++||+||+|+||++ |++..+.
T Consensus       152 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~  191 (261)
T PRK08265        152 ASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL  191 (261)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhh
Confidence            99999999999999999999999999999999 7765543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-35  Score=237.62  Aligned_cols=195  Identities=29%  Similarity=0.408  Sum_probs=170.3

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   77 (223)
                      |+..+++++|+++||||++|||+++|++|+++|++|++++|         +....+...+++...+.   .+.+|+.|..
T Consensus         2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   72 (278)
T PRK08277          2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDR---------NQEKAEAVVAEIKAAGGEALAVKADVLDKE   72 (278)
T ss_pred             CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            66777889999999999999999999999999999999987         55555555556654333   3467888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCC---------------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRD---------------KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN  142 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  142 (223)
                      +++.+++++.++++++|+||||||....               .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+
T Consensus        73 ~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  152 (278)
T PRK08277         73 SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK  152 (278)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence            8999999999999999999999996532               2456788999999999999999999999999998877


Q ss_pred             CCcEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        143 YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       143 ~g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|+||++||..+..+.++...|+++|+|+++++++++.|++++||+||+|+||++ |++....
T Consensus       153 ~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  215 (278)
T PRK08277        153 GGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL  215 (278)
T ss_pred             CcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh
Confidence            7999999999999999999999999999999999999999999999999999999 7765443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=6.1e-36  Score=236.20  Aligned_cols=189  Identities=29%  Similarity=0.485  Sum_probs=163.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   80 (223)
                      .++++||++||||+++|||+++|++|+++|++|+++++.         .  .++..+.+...+   ..+.+|++|.++++
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~---------~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   73 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV---------E--PTETIEQVTALGRRFLSLTADLRKIDGIP   73 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc---------c--hHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            346889999999999999999999999999999988652         1  112223333222   23467999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~  159 (223)
                      .+++++.++++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..+.+
T Consensus        74 ~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  153 (253)
T PRK08993         74 ALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI  153 (253)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC
Confidence            99999999999999999999987767788899999999999999999999999999997754 58999999999999989


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|+++|+|+++++++++.|++++||+||+|+||++ |++...
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~  198 (253)
T PRK08993        154 RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ  198 (253)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhh
Confidence            99999999999999999999999999999999999999 776554

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=5.1e-36  Score=237.31  Aligned_cols=180  Identities=26%  Similarity=0.423  Sum_probs=161.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|+...         ..        ....+.+|++|..+++.++++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~---------~~--------~~~~~~~D~~~~~~i~~~~~~   65 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS---------YN--------DVDYFKVDVSNKEQVIKGIDY   65 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc---------cC--------ceEEEEccCCCHHHHHHHHHH
Confidence            6789999999999999999999999999999999874221         10        223456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+.|+||++||..+..+.++...|+
T Consensus        66 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  145 (258)
T PRK06398         66 VISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYV  145 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhh
Confidence            99999999999999998777788899999999999999999999999999999887779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++|+++++++++++.|+++. |+||+|+||++ |++...
T Consensus       146 ~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        146 TSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             hhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence            99999999999999999876 99999999999 776543

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=233.41  Aligned_cols=191  Identities=32%  Similarity=0.488  Sum_probs=167.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +.+++|++|||||++|||.++|++|+++|++|++++|         +....+...+++...+.   .+..|+.|.++++.
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   73 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADR---------DAAGGEETVALIREAGGEALFVACDVTRDAEVKA   73 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            4578999999999999999999999999999999987         55555555555554333   34568888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++.+.+.++++|++|||+|.... .++.+.+.++|++++++|+.+++.+++.++|++.+.+.++||++||..+..+.++
T Consensus        74 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~  153 (253)
T PRK06172         74 LVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK  153 (253)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC
Confidence            999999999999999999997643 4577889999999999999999999999999998877789999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ...|+++|+++++|+++++.|+.++||+|++|+||++ |++..+.
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~  198 (253)
T PRK06172        154 MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA  198 (253)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence            9999999999999999999999999999999999999 7776654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.9e-36  Score=240.33  Aligned_cols=197  Identities=20%  Similarity=0.209  Sum_probs=150.9

Q ss_pred             ccccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCC------CCCCCCCh-h----hhhH----HHHHHHHhC
Q psy16220          4 QVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQ------RDGDGKSS-K----AADT----VVAEIRSKG   66 (223)
Q Consensus         4 ~~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~------~~~~~~~~-~----~~~~----~~~~~~~~~   66 (223)
                      ..+++||++||||++  +|||+++|+.|+++|++|++.++.+.      ....++.. .    ....    ....+....
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            467899999999995  99999999999999999999875310      00000000 0    0000    000000000


Q ss_pred             C---cc--------ccccCCccchHHHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q psy16220         67 G---KA--------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRA  133 (223)
Q Consensus        67 ~---~~--------~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  133 (223)
                      .   .+        ..+..++.+++++++++.+++|++|+||||||...  ..++.+.+.++|++++++|+.+++.+++.
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH  162 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            0   00        11122233578899999999999999999998653  46888999999999999999999999999


Q ss_pred             HHHHHHhcCCCcEEEEecCcccccCCCCc-hhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-ccccc
Q psy16220        134 AWPHMKKQNYGRLVMTASNSGLLGNFGQA-NYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       134 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++|+|+++  |+||+++|..+..+.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||++ |++..
T Consensus       163 ~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~  232 (299)
T PRK06300        163 FGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK  232 (299)
T ss_pred             HHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence            99999764  8999999999988888875 8999999999999999999987 5999999999999 77654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=235.16  Aligned_cols=195  Identities=24%  Similarity=0.370  Sum_probs=171.4

Q ss_pred             CCCc-cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCc
Q psy16220          1 MPEQ-VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSV   76 (223)
Q Consensus         1 m~~~-~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   76 (223)
                      |.++ +++++|++|||||+++||+++|++|+++|++|++++|         ++...++..+.++..+   ..+.+|+.|.
T Consensus         1 ~~~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~i~~~~~~~~~~~~D~~~~   71 (255)
T PRK07523          1 MSLNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGR---------DPAKLAAAAESLKGQGLSAHALAFDVTDH   71 (255)
T ss_pred             CCccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCceEEEEEccCCCH
Confidence            4433 3478999999999999999999999999999999987         5555555556665433   2345689999


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+++.+++.+.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+.+.|.+++.|+||++||..+..
T Consensus        72 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  151 (255)
T PRK07523         72 DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL  151 (255)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc
Confidence            99999999999999999999999998877788889999999999999999999999999999887779999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +.++...|+++|++++.++++++.|++++||+||+|.||++ +++....
T Consensus       152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~  200 (255)
T PRK07523        152 ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL  200 (255)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh
Confidence            99999999999999999999999999999999999999999 7765543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=6.8e-36  Score=235.10  Aligned_cols=187  Identities=32%  Similarity=0.481  Sum_probs=162.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---CCccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +..  ....+.+...   ...+..|+++.++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r---------~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR---------SEP--SETQQQVEALGRRFLSLTADLSDIEAIKAL   70 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC---------chH--HHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            578999999999999999999999999999999987         221  1222233322   23456799999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++++|.+.+ .|+||++||..+..+.++.
T Consensus        71 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  150 (248)
T TIGR01832        71 VDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV  150 (248)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC
Confidence            999988999999999999988777778889999999999999999999999999997664 6899999999988888889


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+++|+++++++++++.|++++||+||+|+||++ |++...
T Consensus       151 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  193 (248)
T TIGR01832       151 PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA  193 (248)
T ss_pred             chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc
Confidence            999999999999999999999999999999999999 776543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.2e-35  Score=232.13  Aligned_cols=184  Identities=17%  Similarity=0.225  Sum_probs=161.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~   85 (223)
                      |+++||||++|||+++|++|+ +|++|++++|         +....+++.+++++.+.    .+.+|++|.+++++++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~   70 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAAR---------RPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ   70 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeC---------CHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence            479999999999999999999 5999999987         66667777777765442    346799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+.++++|++|||||.....+..+.+.+++++++++|+.+++.+.+.++|.|.+++ .|+||++||.++..+.++...|
T Consensus        71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y  150 (246)
T PRK05599         71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVY  150 (246)
T ss_pred             HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcch
Confidence            999999999999999987655566677788899999999999999999999998654 5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|+|+.+|+++|+.|++++||+||+|+||++ |++...
T Consensus       151 ~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~  190 (246)
T PRK05599        151 GSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG  190 (246)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC
Confidence            999999999999999999999999999999999 776543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-36  Score=236.61  Aligned_cols=188  Identities=33%  Similarity=0.518  Sum_probs=164.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         + ...++..+.+...+   ..+.+|+++.++++.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   80 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTH---------G-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEK   80 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------C-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            4578999999999999999999999999999999987         2 22233333333322   245679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++.
T Consensus        81 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  160 (258)
T PRK06935         81 VVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV  160 (258)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc
Confidence            99999999999999999999877777888899999999999999999999999999998877999999999999998999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|+++|+++++++++++.|++++||+||+|+||++ |++..
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  202 (258)
T PRK06935        161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTA  202 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchh
Confidence            999999999999999999999999999999999999 66543

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-35  Score=233.97  Aligned_cols=188  Identities=27%  Similarity=0.387  Sum_probs=168.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +++++++|||||++|||+++|++|+++|++|++.+|         +....++..+++. ....+.+|++|.++++.+++.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~   71 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDL---------DEALAKETAAELG-LVVGGPLDVTDPASFAAFLDA   71 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHH
Confidence            577899999999999999999999999999999877         5555555444443 233456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|+
T Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  151 (273)
T PRK07825         72 VEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYC  151 (273)
T ss_pred             HHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchH
Confidence            99999999999999998877888888999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++|+++.+|+++++.|+.+.||++++|+||++ |++...
T Consensus       152 asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~  190 (273)
T PRK07825        152 ASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG  190 (273)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc
Confidence            99999999999999999999999999999999 766544

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-35  Score=231.25  Aligned_cols=188  Identities=26%  Similarity=0.365  Sum_probs=158.2

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|++.++.        +....++...++...+..   +..|+.+.++++..+
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGN--------RKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALY   73 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCC--------CHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHH
Confidence            368999999999999999999999999999987531        344444555555543332   345777777777777


Q ss_pred             HHHHH----hcC--CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         84 QTALE----NFG--RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        84 ~~~~~----~~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++.+    .++  ++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.  |+||++||..+..+
T Consensus        74 ~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~  151 (252)
T PRK12747         74 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRIS  151 (252)
T ss_pred             HHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccC
Confidence            77654    334  89999999998766678888999999999999999999999999999764  89999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .++...|++||+++++++++++.|++++||+||+|+||+| |++..+.
T Consensus       152 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  199 (252)
T PRK12747        152 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL  199 (252)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc
Confidence            9999999999999999999999999999999999999999 7776543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2e-35  Score=216.07  Aligned_cols=185  Identities=18%  Similarity=0.255  Sum_probs=167.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      |+++|-++|||||++|||+++|++|.+.|..|++++|         +++.+++...+... .....+|+.|.++++.+++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR---------~e~~L~e~~~~~p~-~~t~v~Dv~d~~~~~~lve   70 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGR---------NEERLAEAKAENPE-IHTEVCDVADRDSRRELVE   70 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC---------cHHHHHHHHhcCcc-hheeeecccchhhHHHHHH
Confidence            3678999999999999999999999999999999977         88888777666554 3456789999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCC--CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFA--RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      .+.++|+.+++||||||+.....+.  +...++.++.+.+|+.+|..|++.++|++.+++.+.||+|||+.+..|....+
T Consensus        71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~P  150 (245)
T COG3967          71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTP  150 (245)
T ss_pred             HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccc
Confidence            9999999999999999987665443  45677788999999999999999999999999889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      .||++|+|++.++.+|+.++...+|.|..+.|.+| |+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999999999999999999999999999999999 54

>KOG1207|consensus

Probab=100.00  E-value=4.8e-37  Score=219.06  Aligned_cols=189  Identities=24%  Similarity=0.335  Sum_probs=162.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++.|+++++||+.-|||+++++.|++.|++|+.+.|         ++..+.++.++....   +.....|..+.+..++
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR---------~~a~L~sLV~e~p~~---I~Pi~~Dls~wea~~~   70 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVAR---------NEANLLSLVKETPSL---IIPIVGDLSAWEALFK   70 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEec---------CHHHHHHHHhhCCcc---eeeeEecccHHHHHHH
Confidence            5678999999999999999999999999999999987         777777766555432   3444445555455444


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      . ....+++|+||||||.....++.+++.++++++|++|+.+.+.+++.....+..+ ..|.||++||.++..+..++..
T Consensus        71 ~-l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtv  149 (245)
T KOG1207|consen   71 L-LVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTV  149 (245)
T ss_pred             h-hcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceE
Confidence            4 4455799999999999999999999999999999999999999999966655543 4589999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ||++|+|+++++|+|+.|++|++||||+|+|..| |.|..+-+.
T Consensus       150 YcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS  193 (245)
T KOG1207|consen  150 YCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS  193 (245)
T ss_pred             EeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC
Confidence            9999999999999999999999999999999999 999887664

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-35  Score=232.07  Aligned_cols=187  Identities=28%  Similarity=0.412  Sum_probs=160.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   83 (223)
                      +.+++|+++||||++|||+++|+.|+++|++|+++++.        ++...+    ++... ...+.+|++|..+++.++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~--------~~~~~~----~l~~~~~~~~~~Dl~~~~~~~~~~   70 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS--------AENEAK----ELREKGVFTIKCDVGNRDQVKKSK   70 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--------cHHHHH----HHHhCCCeEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999987652        222222    22222 234567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~  162 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+.. +.++..
T Consensus        71 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (255)
T PRK06463         71 EVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTT  150 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCcc
Confidence            9999999999999999998766778888999999999999999999999999999877779999999988775 456788


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|++||+|+++++++++.|++++||+||+|+||++ |++..+
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence            99999999999999999999999999999999999 776644

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=4.8e-35  Score=235.79  Aligned_cols=187  Identities=24%  Similarity=0.323  Sum_probs=160.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++.+|+.       +....+++.+.+...+.   .+.+|++|.++++++
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  118 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV-------EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSL  118 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc-------chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHH
Confidence            47889999999999999999999999999999987621       22223333333333332   346688898899999


Q ss_pred             HHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|+|.+.  ++||++||..+..+.++.
T Consensus       119 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~iv~iSS~~~~~~~~~~  196 (294)
T PRK07985        119 VHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITTSSIQAYQPSPHL  196 (294)
T ss_pred             HHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--CEEEEECCchhccCCCCc
Confidence            9999999999999999999753 4567888999999999999999999999999998754  899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      .+|+++|+|+++++++++.|++++||+||+|+||+| |++.
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence            999999999999999999999999999999999999 7764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.4e-35  Score=230.10  Aligned_cols=196  Identities=20%  Similarity=0.255  Sum_probs=166.4

Q ss_pred             ccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCC--CCChhhhhHHHHHHHHhCC---ccccccCCccc
Q psy16220          6 RFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGD--GKSSKAADTVVAEIRSKGG---KAVPNYNSVVD   78 (223)
Q Consensus         6 ~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   78 (223)
                      .++||++|||||+  +|||+++|++|+++|++|++.+|.......  .+......+..+++++.+.   .+.+|++|.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5789999999999  499999999999999999998653211100  1122333344455554443   34568999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++++++++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+.+.++|.|.+++.|+||++||..+..+.
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM  162 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence            99999999999999999999999877778889999999999999999999999999999987777999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ++...|+++|+++++|+++++.|++++||+||+|+||++ |++.
T Consensus       163 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~  206 (256)
T PRK12859        163 VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM  206 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC
Confidence            999999999999999999999999999999999999999 6643

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=4.2e-35  Score=234.64  Aligned_cols=191  Identities=27%  Similarity=0.404  Sum_probs=164.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   82 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++..  ....+..|++|.++++++
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   84 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL---------QDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRA   84 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHH
Confidence            4567999999999999999999999999999999987         44444444444432  122356799999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++.+.++++++|+||||||....  .++.+.+.++|++++++|+.+++.+++.+++.|.+.+.|+||++||..+..+.++
T Consensus        85 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~  164 (280)
T PLN02253         85 VDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG  164 (280)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC
Confidence            99999999999999999997643  4577889999999999999999999999999998777799999999999888888


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ...|+++|+++++++++|+.|++++||+||+|+||.+ |++....
T Consensus       165 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~  209 (280)
T PLN02253        165 PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAH  209 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccc
Confidence            8999999999999999999999999999999999999 7765433

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=2.7e-35  Score=233.68  Aligned_cols=186  Identities=31%  Similarity=0.429  Sum_probs=155.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|+++||||++|||+++|++|+++|++|++++|         +....+++.+........+..|+.|..++++++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK---------SAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVAR   72 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHH
Confidence            478999999999999999999999999999999987         44444443322211222356688888889999999


Q ss_pred             HHHhcCCccEEEeccCCCCC-CCCCCCCH----HHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         86 ALENFGRIDIVINNAGILRD-KSFARISD----TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +.++++++|+||||||.... .++.+.+.    ++|++++++|+.+++.+++.++|.|.+.+ |+||+++|..+..+.++
T Consensus        73 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~  151 (262)
T TIGR03325        73 CVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGG  151 (262)
T ss_pred             HHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCC
Confidence            99999999999999997532 33333333    57999999999999999999999997654 89999999999999889


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|+++|+|+++|+++++.|++++ |+||+|+||++ |++..
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~  193 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRG  193 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcc
Confidence            9999999999999999999999987 99999999999 77654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-35  Score=230.91  Aligned_cols=190  Identities=31%  Similarity=0.433  Sum_probs=169.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+.+...+.   .+.+|+.|..++++
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   76 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDI---------NQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQA   76 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            4578999999999999999999999999999999976         55555555566655433   34679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+.+.++|+|.+.+.++||++||..+..+.++.
T Consensus        77 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  156 (265)
T PRK07097         77 MVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV  156 (265)
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCC
Confidence            99999999999999999999887778888999999999999999999999999999998778999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+++|++++.++++++.|+.++||+||+|+||.+ |++...
T Consensus       157 ~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (265)
T PRK07097        157 SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAP  199 (265)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhh
Confidence            999999999999999999999999999999999999 776543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-35  Score=233.03  Aligned_cols=186  Identities=27%  Similarity=0.440  Sum_probs=160.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|+.|..+++.++++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLER---------SAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQ   73 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999987         55555555444433334566799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCC-CCCCCCCCHHH----HHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         86 ALENFGRIDIVINNAGILR-DKSFARISDTD----WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +.++++++|+||||||... ..++.+.+.++    |++++++|+.+++.+++.++|.|++.+ |+||++||..+..+.++
T Consensus        74 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~  152 (263)
T PRK06200         74 TVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGG  152 (263)
T ss_pred             HHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCCC
Confidence            9999999999999999764 34555666655    899999999999999999999987654 89999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|++||+++++|+++|+.|+++. |+||+|+||++ |++..
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        153 GPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcC
Confidence            9999999999999999999999884 99999999999 77643

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=228.32  Aligned_cols=192  Identities=28%  Similarity=0.373  Sum_probs=168.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||++++++|+++|++|++++|         +....+.+.+++.+.+.   .+.+|+.+..+++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   73 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR---------KLDGCQAVADAIVAAGGKAEALACHIGEMEQID   73 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            35688999999999999999999999999999999987         55556666666654432   3456888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      .+++++.+.++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|++.+.+.++||++||..+..+.+
T Consensus        74 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  153 (252)
T PRK07035         74 ALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGD  153 (252)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCC
Confidence            999999999999999999999653 3567788999999999999999999999999999887779999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +...|++||+++++++++++.|+.++||+|++|+||++ |++....
T Consensus       154 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~  199 (252)
T PRK07035        154 FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL  199 (252)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc
Confidence            99999999999999999999999999999999999999 7765543

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-35  Score=255.92  Aligned_cols=187  Identities=27%  Similarity=0.331  Sum_probs=165.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ...+|++|||||++|||+++|++|+++|++|++++|         +....+++.+++......+..|++|.++++.++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  336 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDR---------DAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQ  336 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987         55555555555433333467799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|.  +.|+||++||.++..+.++...|
T Consensus       337 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y  414 (520)
T PRK06484        337 IQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAY  414 (520)
T ss_pred             HHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchh
Confidence            9999999999999999864 35778889999999999999999999999999993  34899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       415 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  454 (520)
T PRK06484        415 CASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLA  454 (520)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhh
Confidence            999999999999999999999999999999999 776554

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=5.6e-35  Score=237.63  Aligned_cols=185  Identities=25%  Similarity=0.376  Sum_probs=155.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--c---cccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--K---AVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~   81 (223)
                      ..|++++||||++|||+++|++|+++|++|++++|         +.+.+++..+++.+...  .   +.+|+++  +..+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~  119 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVAR---------NPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDE  119 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEEC---------CHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHH
Confidence            36899999999999999999999999999999988         66777777777765422  2   2335543  3455


Q ss_pred             HHHHHHHhcC--CccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-
Q psy16220         82 IVQTALENFG--RIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-  156 (223)
Q Consensus        82 ~~~~~~~~~~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-  156 (223)
                      .++++.+.++  ++|+||||||....  .++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||.++.. 
T Consensus       120 ~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~  199 (320)
T PLN02780        120 GVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVI  199 (320)
T ss_pred             HHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC
Confidence            5666666655  46699999998643  467788999999999999999999999999999988889999999998865 


Q ss_pred             c-CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        157 G-NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       157 ~-~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      + .|+...|++||+++++|+++|+.|++++||+|++|+||+| |++..
T Consensus       200 ~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        200 PSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence            3 5889999999999999999999999999999999999999 77654

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-35  Score=231.61  Aligned_cols=189  Identities=31%  Similarity=0.503  Sum_probs=165.4

Q ss_pred             ccCCcEEEEEcCCC-chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----CCccccccCCccch
Q psy16220          6 RFDGRVAIVTGAGA-GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPNYNSVVDG   79 (223)
Q Consensus         6 ~~~~~~~lItGa~~-giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   79 (223)
                      .+++|++|||||++ |||+++|+.|+++|++|++++|         +....+...++++..     ...+..|+.+.+++
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   84 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDI---------HERRLGETADELAAELGLGRVEAVVCDVTSEAQV   84 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHH
Confidence            35689999999985 9999999999999999999877         455555555555441     12345688888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~  158 (223)
                      +.+++.+.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|...+ .|+||++||..+..+.
T Consensus        85 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~  164 (262)
T PRK07831         85 DALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ  164 (262)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC
Confidence            999999999999999999999987667888899999999999999999999999999998765 6899999999998888


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|+++|+|+++++++++.|++++||+||+|+||++ |++...
T Consensus       165 ~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~  210 (262)
T PRK07831        165 HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK  210 (262)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc
Confidence            999999999999999999999999999999999999999 776554

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.2e-34  Score=229.31  Aligned_cols=193  Identities=26%  Similarity=0.367  Sum_probs=170.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CC---ccccccCCccc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GG---KAVPNYNSVVD   78 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~   78 (223)
                      ++++++|++|||||++|||++++++|+++|++|++++|         +.+..++..+++...  +.   .+.+|+.+.++
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~   74 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVAR---------DADALAQARDELAEEFPEREVHGLAADVSDDED   74 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH
Confidence            45788999999999999999999999999999999987         555555555555543  22   23568889889


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++.+++.+.+.++++|+||||||.....+..+.+.++|++++++|+.+++.++++++|+|++.+.++||++||..+..+.
T Consensus        75 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~  154 (257)
T PRK09242         75 RRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV  154 (257)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC
Confidence            99999999999999999999999876677788999999999999999999999999999988777999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ++...|+++|++++.++++++.|++++||++|+|+||++ |++..+..
T Consensus       155 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~  202 (257)
T PRK09242        155 RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPL  202 (257)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccccc
Confidence            999999999999999999999999999999999999999 77766543

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=231.57  Aligned_cols=197  Identities=25%  Similarity=0.364  Sum_probs=165.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +.+++|++|||||++|||+++|++|+++|++|++++|+.....  .....+++..+++...+.   .+.+|+++.+++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHP--KLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccccccc--chhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            4578899999999999999999999999999999998543211  011123344445544333   34568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--C
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--F  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~--~  159 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+.|+||++||..+..+.  +
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            99999999999999999999877778888999999999999999999999999999998777899999998887776  8


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCC-Cc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPT-AA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg-~v-t~~~~~  203 (223)
                      +...|++||++++.++++++.|++++||+||+|+|| .+ |+...+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~  205 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN  205 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh
Confidence            889999999999999999999999999999999999 56 554443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-35  Score=229.79  Aligned_cols=189  Identities=28%  Similarity=0.420  Sum_probs=166.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +.+++|++|||||++|||+++|+.|+++|++|++++|         +....++..+++......+..|++|.++++.+++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADI---------KPARARLAALEIGPAAIAVSLDVTRQDSIDRIVA   72 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999987         5555555544443333345679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      .+.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+++.|.+++ .++||++||..+..+.++...
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  152 (257)
T PRK07067         73 AAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSH  152 (257)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCch
Confidence            9999999999999999987777888889999999999999999999999999987653 479999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |++||++++.++++++.|+.++||+||+|.||++ +++.+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~  192 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWD  192 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhh
Confidence            9999999999999999999999999999999999 76544

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=229.94  Aligned_cols=187  Identities=25%  Similarity=0.337  Sum_probs=163.3

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      ||+..+++||++|||||++|||++++++|+++|++|++++|+..         ..      .......+.+|+.|.++++
T Consensus         1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~---------~~------~~~~~~~~~~D~~~~~~~~   65 (260)
T PRK06523          1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP---------DD------LPEGVEFVAADLTTAEGCA   65 (260)
T ss_pred             CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh---------hh------cCCceeEEecCCCCHHHHH
Confidence            78888899999999999999999999999999999999988321         10      1112234567999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      .+++++.+.++++|+||||||...  ..++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.
T Consensus        66 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~  145 (260)
T PRK06523         66 AVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL  145 (260)
T ss_pred             HHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC
Confidence            999999999999999999999653  356777899999999999999999999999999998777899999999988886


Q ss_pred             C-CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        159 F-GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       159 ~-~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      + +...|+++|+++++++++++.|++++||++|+|+||.| |++..
T Consensus       146 ~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~  191 (260)
T PRK06523        146 PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV  191 (260)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH
Confidence            5 78999999999999999999999999999999999999 77653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=227.89  Aligned_cols=183  Identities=20%  Similarity=0.196  Sum_probs=160.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++|||||++|||+++|++|+++|++|++++|         +....++..+++...+  ..+.+|++|.++++++++++.+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~   72 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSR---------NEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWE   72 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHH
Confidence            6999999999999999999999999999987         5556666666665432  2346789999999999999999


Q ss_pred             hcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCcEEEEecCcccccCCCCchhh
Q psy16220         89 NFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-QNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        89 ~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +++++|+||||||...  ..++.+.+.++|.+.+.+|+.+++.+++.++|.|.+ .+.|+||++||..+..+.++...|+
T Consensus        73 ~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  152 (259)
T PRK08340         73 LLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLAD  152 (259)
T ss_pred             hcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHH
Confidence            9999999999999754  345778889999999999999999999999999863 4568999999999998999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++|+++.+++++|+.|++++||+||+|+||++ |++..
T Consensus       153 ~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~  190 (259)
T PRK08340        153 VTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGAR  190 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHH
Confidence            99999999999999999999999999999999 77654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-34  Score=226.63  Aligned_cols=192  Identities=30%  Similarity=0.439  Sum_probs=170.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   80 (223)
                      ++++++|+++||||+++||++++++|+++|++|++++|         +....++..++++..+.   .+.+|+.+..++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   76 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGR---------NAATLEAAVAALRAAGGAAEALAFDIADEEAVA   76 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            56688999999999999999999999999999999987         55555555666654432   3456888888889


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++.+.++++++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+++.|.+.+.++||++||..+..+.++
T Consensus        77 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~  156 (256)
T PRK06124         77 AAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG  156 (256)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC
Confidence            99999999999999999999987777888899999999999999999999999999998877799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ...|+++|++++++++.++.|+.++||+|++|+||++ |++....
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~  201 (256)
T PRK06124        157 DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM  201 (256)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh
Confidence            9999999999999999999999999999999999999 7664433

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2e-34  Score=232.88  Aligned_cols=188  Identities=26%  Similarity=0.414  Sum_probs=161.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++.+++.       +....++..+.++..+.   .+.+|+.|.++++++
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPE-------EEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc-------chHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence            46789999999999999999999999999999887621       12223344445544333   345688888899999


Q ss_pred             HHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|.+.  ++||++||..+..+.++.
T Consensus       125 ~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~  202 (300)
T PRK06128        125 VERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG--ASIINTGSIQSYQPSPTL  202 (300)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC--CEEEEECCccccCCCCCc
Confidence            9999999999999999999753 4567889999999999999999999999999998754  799999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|++||+++++|+++|+.|++++||+||+|+||++ |++..
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~  244 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP  244 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence            999999999999999999999999999999999999 77643

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-34  Score=231.86  Aligned_cols=191  Identities=42%  Similarity=0.647  Sum_probs=164.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   80 (223)
                      ..++++|++|||||++|||+++|++|+++|++|++.++.        +....+...+++...+.   .+..|++|.++++
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~--------~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~   78 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA--------SALDASDVLDEIRAAGAKAVAVAGDISQRATAD   78 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC--------chhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            456889999999999999999999999999999998762        22334455556655443   3456888888889


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-------CCcEEEEecCc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-------YGRLVMTASNS  153 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~vsS~~  153 (223)
                      ++++.+.+ ++++|+||||||......+.+.+.++|+.++++|+.+++.+++.+.++|.+..       .|+||++||..
T Consensus        79 ~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  157 (306)
T PRK07792         79 ELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEA  157 (306)
T ss_pred             HHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcc
Confidence            99999888 99999999999988777788899999999999999999999999999987531       37999999999


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCccccccc
Q psy16220        154 GLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTED  203 (223)
Q Consensus       154 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~  203 (223)
                      +..+.++...|+++|+++++|+++++.|++++||+||+|+||..|.+...
T Consensus       158 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~~t~~~~~  207 (306)
T PRK07792        158 GLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRARTAMTAD  207 (306)
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCCCCchhhh
Confidence            99999999999999999999999999999999999999999964666544

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-34  Score=228.70  Aligned_cols=187  Identities=25%  Similarity=0.374  Sum_probs=165.1

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   77 (223)
                      |..++++++|++|||||++|||.+++++|+++|++|++++|         +........+++...+.   .+.+|+++..
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   71 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASR---------SQEKVDAAVAQLQQAGPEGLGVSADVRDYA   71 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCceEEEECCCCCHH
Confidence            56667899999999999999999999999999999999987         44445555555554332   3457999999


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++.+++++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+ |+||++||..+..+
T Consensus        72 ~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~  150 (264)
T PRK07576         72 AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVP  150 (264)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccC
Confidence            99999999999999999999999976667778889999999999999999999999999987554 89999999988888


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .++...|+++|++++.|+++++.|+.++||+|++|+||.+
T Consensus       151 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~  190 (264)
T PRK07576        151 MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPI  190 (264)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccc
Confidence            9999999999999999999999999999999999999998

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=4.3e-34  Score=225.88  Aligned_cols=192  Identities=31%  Similarity=0.490  Sum_probs=166.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   80 (223)
                      ++++++|++|||||++|||++++++|+++|+++++++|         +....+....++...+.   .+.+|+.|.+++.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~   76 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVDEIQQLGGQAFACRCDITSEQELS   76 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH
Confidence            45678999999999999999999999999999999877         55555555555544332   3456888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++.+.+.++++|++|||||.....++ +.+.++|++.+++|+.+++.+++.++|+|.+.+.++||++||..+..+.++
T Consensus        77 ~~~~~~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  155 (255)
T PRK06113         77 ALADFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN  155 (255)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC
Confidence            9999998899999999999998655544 678899999999999999999999999998776789999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ...|+++|+++++++++++.++.+.||+||+|+||++ |++..+..
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~  201 (255)
T PRK06113        156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI  201 (255)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc
Confidence            9999999999999999999999999999999999999 77765543

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-34  Score=227.07  Aligned_cols=183  Identities=27%  Similarity=0.351  Sum_probs=159.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      ||++|||||++|||++++++|+++|++|++++|         +....++..+++...+.   .+.+|++|.+++++++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGR---------TKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQ   71 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            589999999999999999999999999999987         44445555555543322   345688899999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++++|.+. ..|+||++||..+..+.++...|
T Consensus        72 ~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  151 (252)
T PRK07677         72 IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHS  151 (252)
T ss_pred             HHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcch
Confidence            99999999999999997666677889999999999999999999999999998754 35899999999998888899999


Q ss_pred             hhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-ccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~  200 (223)
                      +++|+++++|+++|+.|+.+ +||+||+|+||++ ++.
T Consensus       152 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~  189 (252)
T PRK07677        152 AAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTG  189 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccc
Confidence            99999999999999999975 6999999999999 443

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=230.52  Aligned_cols=183  Identities=25%  Similarity=0.325  Sum_probs=160.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +|++|||||++|||+++|++|+++|++|++++|         +....+.+.+   .....+.+|++|..+++.+++.+.+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r---------~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~   71 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCR---------KEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLE   71 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999987         4443333221   1122356788898889999998877


Q ss_pred             hc-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         89 NF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        89 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      .+ +++|+||||||....+++.+.+.++++.++++|+.+++.+++.++|.|.+.+.|+||++||..+..+.++...|++|
T Consensus        72 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  151 (277)
T PRK05993         72 LSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNAS  151 (277)
T ss_pred             HcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHH
Confidence            66 68999999999888888888999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++++|+++|+.|++++||+|++|+||++ |++..+
T Consensus       152 K~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        152 KFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            999999999999999999999999999999 776654

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=5.4e-34  Score=225.33  Aligned_cols=186  Identities=27%  Similarity=0.433  Sum_probs=164.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||++|||++++++|+++|++|++++|         +....++...++...+.   .+..|+.+.++++.++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDY---------NEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ   72 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999987         55555555555554332   345688899899999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  152 (256)
T PRK08643         73 VVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVY  152 (256)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchh
Confidence            999999999999999987777788889999999999999999999999999997654 4799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++.+++.++.|++++||+||+|+||++ |+++.+
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  192 (256)
T PRK08643        153 SSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD  192 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH
Confidence            999999999999999999999999999999999 776653

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-34  Score=225.62  Aligned_cols=185  Identities=21%  Similarity=0.354  Sum_probs=158.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~   80 (223)
                      +++++|++||||+++|||+++|++|+++|++|++++|         +....+...+++... +.   .+.+|++|.++++
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   73 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVAR---------DADALEALAADLRAAHGVDVAVHALDLSSPEARE   73 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHH
Confidence            4678999999999999999999999999999999987         555555555555543 22   2345666666655


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      .++    +.++++|++|||||.....++.+.+.++|+.++++|+.+++.+++.++|.|.+.+.|+||++||..+..+.++
T Consensus        74 ~~~----~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  149 (259)
T PRK06125         74 QLA----AEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD  149 (259)
T ss_pred             HHH----HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC
Confidence            544    4468999999999987777888999999999999999999999999999999877789999999999888888


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +..|+++|+|+++++++++.|+.++||+||+|+||++ |++..
T Consensus       150 ~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  192 (259)
T PRK06125        150 YICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML  192 (259)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH
Confidence            9999999999999999999999999999999999999 77544

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4e-34  Score=227.37  Aligned_cols=182  Identities=29%  Similarity=0.415  Sum_probs=160.1

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      |+.-+++++|++|||||++|||++++++|+++|++|++++++.....         .      .....+.+|++|..+++
T Consensus         1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~------~~~~~~~~D~~~~~~~~   65 (266)
T PRK06171          1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------H------ENYQFVPTDVSSAEEVN   65 (266)
T ss_pred             CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------c------CceEEEEccCCCHHHHH
Confidence            67667889999999999999999999999999999999987432211         0      11234567999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCC---------CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDK---------SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      .+++.+.+.++++|+||||||.....         +..+.+.++|++++++|+.+++.+++.+.++|.+.+.|+||++||
T Consensus        66 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  145 (266)
T PRK06171         66 HTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSS  145 (266)
T ss_pred             HHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            99999999999999999999975432         234678999999999999999999999999998877799999999


Q ss_pred             CcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        152 NSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..+..+.++...|+++|+++++|+++++.|++++||+||+|+||++
T Consensus       146 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~  191 (266)
T PRK06171        146 EAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGIL  191 (266)
T ss_pred             ccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccc
Confidence            9999999999999999999999999999999999999999999998

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.2e-34  Score=225.93  Aligned_cols=188  Identities=27%  Similarity=0.378  Sum_probs=161.2

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      ...+++||++|||||+++||+++|++|+++|++|++++|         +....++..+++......+..|+.+..+++.+
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   74 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL---------DRERGSKVAKALGENAWFIAMDVADEAQVAAG   74 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHHcCCceEEEEccCCCHHHHHHH
Confidence            467789999999999999999999999999999999977         33333333333322223456799999889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++.++++++|+||||||....  .++.+.+.++|++++++|+.+++.+++.+.|+|.+.. |+||++||..+..+.++
T Consensus        75 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~ii~~sS~~~~~~~~~  153 (255)
T PRK05717         75 VAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-GAIVNLASTRARQSEPD  153 (255)
T ss_pred             HHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-cEEEEEcchhhcCCCCC
Confidence            99999999999999999997643  4677889999999999999999999999999987654 89999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ..+|+++|+++++++++++.++.+ +|+|++|+||.+ |++.
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~  194 (255)
T PRK05717        154 TEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDP  194 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcc
Confidence            999999999999999999999986 599999999999 6553

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=226.42  Aligned_cols=189  Identities=30%  Similarity=0.486  Sum_probs=164.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   83 (223)
                      +++++|++|||||+++||.++|++|+++|++|++++|         +... .....++.. ....+..|+.+..+++.++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r---------~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDR---------SEDV-AEVAAQLLGGNAKGLVCDVSDSQSVEAAV   80 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHH-HHHHHHhhCCceEEEEecCCCHHHHHHHH
Confidence            4578999999999999999999999999999999987         3222 122222222 1124567899999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.|.|.+.+.++||++||..+..+.++...
T Consensus        81 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  160 (255)
T PRK06841         81 AAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVA  160 (255)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCch
Confidence            99999999999999999987767778889999999999999999999999999998877799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++|++++.++++++.|++++||+||+|+||++ |++..+
T Consensus       161 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        161 YCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK  201 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc
Confidence            9999999999999999999999999999999999 766543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-34  Score=224.53  Aligned_cols=191  Identities=30%  Similarity=0.435  Sum_probs=165.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||+++|++|+++|++|++.+|+        +........+++...+.   .+.+|+.|..++.+
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~   74 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS--------DEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVN   74 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHH
Confidence            35789999999999999999999999999999998762        23334444555544333   34568888888889


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~  160 (223)
                      +++.+.++++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++++|.+.+ .|+||++||..+..+.++
T Consensus        75 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~  154 (261)
T PRK08936         75 LIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL  154 (261)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC
Confidence            9999999999999999999987777788899999999999999999999999999998764 589999999999989999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|+++|+|+++++++++.|+.++||+||+|+||++ |++..+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  198 (261)
T PRK08936        155 FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccc
Confidence            9999999999999999999999999999999999999 776543

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-34  Score=232.79  Aligned_cols=188  Identities=27%  Similarity=0.386  Sum_probs=168.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      .+++|+++||||++|||+++|++|+++|++|++++|         +...+++..+++.+.+..   +.+|++|.++++++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R---------~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~   75 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLAR---------GEEGLEALAAEIRAAGGEALAVVADVADAEAVQAA   75 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHH
Confidence            578899999999999999999999999999999987         666666666677654443   45699999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++.+.++++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.+...
T Consensus        76 ~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~  155 (334)
T PRK07109         76 ADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQS  155 (334)
T ss_pred             HHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcch
Confidence            99999999999999999998777788899999999999999999999999999999987779999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCC--CCeEEEEEeCCCc-ccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEK--NNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~--~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .|+++|+++++|+++++.|+..  .+|++++|+||.+ |++..
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh
Confidence            9999999999999999999974  4799999999999 76554

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=227.53  Aligned_cols=190  Identities=24%  Similarity=0.312  Sum_probs=163.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ..+++|+++||||++|||+++|++|+++|++|++++|         +.+..++..+++.+.+.   .+.+|+.|.+++++
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R---------~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~  106 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVAR---------REDLLDAVADRITRAGGDAMAVPCDLSDLDAVDA  106 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            4578899999999999999999999999999999988         55666666666654333   34568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARI--SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GN  158 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~  158 (223)
                      +++.+.+.++++|++|||||.....++.+.  +.++++.++++|+.+++.+++.++|.|++.+.|+||++||.++.. +.
T Consensus       107 ~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  186 (293)
T PRK05866        107 LVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS  186 (293)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC
Confidence            999999999999999999998766555443  457889999999999999999999999988789999999976654 36


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|+++|+|+++|+++++.|++++||+|++|+||++ |++...
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~  232 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP  232 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc
Confidence            788899999999999999999999999999999999999 777653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=223.68  Aligned_cols=184  Identities=33%  Similarity=0.468  Sum_probs=157.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +. ...+..+++...+.   .+.+|++|.++++.
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r---------~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   73 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDR---------SE-LVHEVAAELRAAGGEALALTADLETYAGAQA   73 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------ch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHH
Confidence            4578999999999999999999999999999999987         32 22334444544333   24568888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|.+.+.|+||++||..+.  .++
T Consensus        74 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~  151 (260)
T PRK12823         74 AMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GIN  151 (260)
T ss_pred             HHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCC
Confidence            99999999999999999999653 467788999999999999999999999999999988777899999998764  235


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ..+|+++|++++.|+++++.|++++||+||+|+||++ |++
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        152 RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence            6789999999999999999999999999999999999 654

>KOG1610|consensus

Probab=100.00  E-value=4.8e-34  Score=222.18  Aligned_cols=187  Identities=22%  Similarity=0.300  Sum_probs=166.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH-HHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +..+|.|+|||+.+|+|+.+|++|.++|++|.+.+.         +++..+.+..+. ..+-.++..|+++.++++++.+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl---------~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~   96 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCL---------TEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQ   96 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEee---------cCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHH
Confidence            467899999999999999999999999999999985         555555555555 5556677889999999998888


Q ss_pred             HHHHhc--CCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         85 TALENF--GRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        85 ~~~~~~--~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      .+.+..  ..+-+||||||+. ..++.+..+.+++++++++|++|++.+++.++|++++.+ ||||++||.+|-.+.|..
T Consensus        97 ~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~  175 (322)
T KOG1610|consen   97 WVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPAL  175 (322)
T ss_pred             HHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCccc
Confidence            877765  3599999999976 558999999999999999999999999999999998876 999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++|++||+|++.|+.+|+.|+.++||+|..|.||+. |++..
T Consensus       176 g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  176 GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999999999988 66654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.1e-34  Score=247.16  Aligned_cols=190  Identities=27%  Similarity=0.410  Sum_probs=166.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ..++|++|||||++|||+++|+.|+++|++|++++|         +....++..+++......+.+|++|.++++.+++.
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR---------NVERARERADSLGPDHHALAMDVSDEAQIREGFEQ   72 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987         55555555444433333467799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-cEEEEecCcccccCCCCc
Q psy16220         86 ALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~  162 (223)
                      +.+.++++|+||||||...  ..++.+.+.++|++++++|+.+++.+++.++|+|.+.+.| +||++||..+..+.++..
T Consensus        73 ~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~  152 (520)
T PRK06484         73 LHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRT  152 (520)
T ss_pred             HHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCc
Confidence            9999999999999999743  3567788999999999999999999999999999876555 999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|+++|+++.+|+++|+.|+.++||+|++|+||++ |++..+.
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~  195 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAEL  195 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhh
Confidence            99999999999999999999999999999999999 7776543

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=225.83  Aligned_cols=186  Identities=25%  Similarity=0.327  Sum_probs=162.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+|++|||||++|||++++++|+++|++|++++|         +....+.+.+........+..|+.|.+++..+++.+.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~   73 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVR---------SEAARADFEALHPDRALARLLDVTDFDAIDAVVADAE   73 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC---------CHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence            4679999999999999999999999999999987         4444433332222222344668999999999999999


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      +.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|++++.+.++||++||.++..+.++..+|+++
T Consensus        74 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~s  153 (277)
T PRK06180         74 ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGS  153 (277)
T ss_pred             HHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHH
Confidence            99999999999999887778888999999999999999999999999999998877899999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |+++++++++++.|+++.||++++|.||.+ |++..
T Consensus       154 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        154 KFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence            999999999999999999999999999999 66543

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-34  Score=230.27  Aligned_cols=188  Identities=23%  Similarity=0.293  Sum_probs=158.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-----CccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   79 (223)
                      .++++|+++||||++|||+++|++|+++|++|++++|         +..+.++..+++....     ..+.+|+.|.+++
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R---------~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv   80 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVR---------NRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASV   80 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHH
Confidence            4578999999999999999999999999999999987         6666666666665432     1245699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--  157 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--  157 (223)
                      +++++++.+.++++|+||||||.... +..+.+.++|+.++++|+.+++.+++.++|.|++. .++||++||.++..+  
T Consensus        81 ~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~  158 (313)
T PRK05854         81 AALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAI  158 (313)
T ss_pred             HHHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCc
Confidence            99999999999999999999998653 34467889999999999999999999999999865 489999999877553  


Q ss_pred             ----------CCCCchhhhhHHHHHHHHHHHHhhh--CCCCeEEEEEeCCCc-cccccc
Q psy16220        158 ----------NFGQANYSAAKMALVGLSNTLSIEG--EKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ----------~~~~~~y~~sK~a~~~~~~~l~~e~--~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                                .++...|+.||+++..|++.|+.++  .+.||+||+|+||+| |++..+
T Consensus       159 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        159 NWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             CcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence                      2456789999999999999998764  467999999999999 776543

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-34  Score=223.64  Aligned_cols=184  Identities=27%  Similarity=0.319  Sum_probs=159.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+         ...     .........+..|+.+..+++.+++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~---------~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~   67 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR---------APE-----TVDGRPAEFHAADVRDPDQVAALVD   67 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---------hhh-----hhcCCceEEEEccCCCHHHHHHHHH
Confidence            46889999999999999999999999999999999873         211     0001112235678888888999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      .+.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+.+.|.++ +.|+||++||..+..+.++...
T Consensus        68 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~  147 (252)
T PRK07856         68 AIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAA  147 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCch
Confidence            999999999999999998776777888999999999999999999999999998864 4589999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++|+++++|+++++.|++++ |++|+|+||++ |++...
T Consensus       148 Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~  187 (252)
T PRK07856        148 YGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSEL  187 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhh
Confidence            9999999999999999999988 99999999999 776543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-33  Score=225.25  Aligned_cols=182  Identities=27%  Similarity=0.335  Sum_probs=161.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++|+++||||++|||+++|++|+++|++|++++|         +.+.+.+...   .....+.+|++|.++++.+++++.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r---------~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~   69 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAAR---------RVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTII   69 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999987         4444333211   123345679999999999999999


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      +.++++|+||||||.....++.+.+.++|+.++++|+.+++.+++.++|.|++.+.|+||++||..+..+.+....|+++
T Consensus        70 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  149 (273)
T PRK06182         70 AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHAT  149 (273)
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHH
Confidence            99999999999999887788889999999999999999999999999999998877899999999888888888899999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      |+++++|+++++.|+++.||++++|+||++ |++.
T Consensus       150 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        150 KFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             HHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence            999999999999999999999999999999 7654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.8e-33  Score=221.04  Aligned_cols=189  Identities=28%  Similarity=0.433  Sum_probs=163.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|++..+        ++....++..+++...+..+   .+|+.|..+++..+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCG--------PNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAF   72 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC--------CChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999999988643        13333444455555444333   47888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+++.+.+.+.++||++||..+..+.++...
T Consensus        73 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  152 (246)
T PRK12938         73 DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTN  152 (246)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChh
Confidence            99999999999999999987767788899999999999999999999999999998877789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++|++++.++++++.|+.++||++++|.||++ |++...
T Consensus       153 y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~  193 (246)
T PRK12938        153 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA  193 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh
Confidence            9999999999999999999999999999999999 776544

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=223.62  Aligned_cols=185  Identities=23%  Similarity=0.244  Sum_probs=159.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++++|||||++|||++++++|+++|++|++++|         +.+..++..+++...  ...+.+|++|.++++++++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~   72 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVAR---------RTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF   72 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999987         455555544444322  223456888888899999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFA-RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      .++++++|+||||||........ +.+.++|+.++++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+
T Consensus        73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  152 (257)
T PRK07024         73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYS  152 (257)
T ss_pred             HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchH
Confidence            99999999999999976543333 37889999999999999999999999999888789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +||++++.++++++.|+.++||+|++|+||++ |++..
T Consensus       153 asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  190 (257)
T PRK07024        153 ASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA  190 (257)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh
Confidence            99999999999999999999999999999999 66543

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=222.10  Aligned_cols=192  Identities=31%  Similarity=0.419  Sum_probs=166.8

Q ss_pred             CC-CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCc
Q psy16220          1 MP-EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSV   76 (223)
Q Consensus         1 m~-~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   76 (223)
                      |+ ..++++++++|||||++|||++++++|+++|++|++++|         +....+++.+.+...+.   .+.+|+++.
T Consensus         1 ~~~~~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~   71 (263)
T PRK07814          1 MILDRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAAR---------TESQLDEVAEQIRAAGRRAHVVAADLAHP   71 (263)
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCH
Confidence            55 345688999999999999999999999999999999987         45555555555544333   235688888


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCcEEEEecCccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-QNYGRLVMTASNSGL  155 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~  155 (223)
                      +++.++++++.+.++++|+||||||.....++.+.+.+++++++++|+.+++.+.+.+.++|.+ .+.++||++||..+.
T Consensus        72 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~  151 (263)
T PRK07814         72 EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR  151 (263)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc
Confidence            8899999999999999999999999876677788899999999999999999999999999987 456899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+.++...|+++|++++.++++++.|+.+ +|++|+|+||++ |++..
T Consensus       152 ~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~  198 (263)
T PRK07814        152 LAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALE  198 (263)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhh
Confidence            99999999999999999999999999987 699999999999 66544

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-33  Score=217.82  Aligned_cols=193  Identities=22%  Similarity=0.284  Sum_probs=163.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccCC--ccc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYNS--VVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~   78 (223)
                      .++++|+++||||++|||++++++|+++|++|++++|         +....+...+++...+.    .+..|+++  ..+
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   72 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVAR---------HQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKE   72 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC---------ChHHHHHHHHHHHHcCCCCcceEEeeecccchHH
Confidence            3578899999999999999999999999999999987         55555566666644321    23456654  345


Q ss_pred             hHHHHHHHHHhc-CCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         79 GDKIVQTALENF-GRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        79 ~~~~~~~~~~~~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+.+++.+.+.+ +++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.|.+.+.+++|++||..+..
T Consensus        73 ~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  152 (239)
T PRK08703         73 FEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET  152 (239)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc
Confidence            677888888888 88999999999754 3577888999999999999999999999999999887778999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCC-CeEEEEEeCCCc-ccccccCCC
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKN-NIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~-~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +.++...|++||++++.++++++.|+.++ +|+|++|.||+| |++..+..+
T Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~  204 (239)
T PRK08703        153 PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP  204 (239)
T ss_pred             CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC
Confidence            99999999999999999999999999887 699999999999 776655443

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.7e-33  Score=224.92  Aligned_cols=189  Identities=31%  Similarity=0.462  Sum_probs=165.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +..|++|..+++.+
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   73 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADV---------QQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEAL   73 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            467899999999999999999999999999999987         444555555555543332   46688898899999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC------CcEEEEecCcccc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLL  156 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------g~iv~vsS~~~~~  156 (223)
                      ++.+.+.++++|+||||||.....++.+.+.++|+.++++|+.+++.+++.++|.|.+...      |+||++||.++..
T Consensus        74 ~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  153 (287)
T PRK06194         74 ADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL  153 (287)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            9999999999999999999987777888999999999999999999999999999987654      7999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-cccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +.++...|+++|++++.++++++.|+.  ..+|+++++.||++ |.+...
T Consensus       154 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        154 APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence            999999999999999999999999987  45799999999999 666544

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.3e-33  Score=220.70  Aligned_cols=178  Identities=15%  Similarity=0.183  Sum_probs=153.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-CccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-GKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +|++|||||++|||+++|++|+++|++|++++|+         ....   .+.+...+ ..+.+|+.|.++++.+++++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~---------~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   69 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT---------HYPA---IDGLRQAGAQCIQADFSTNAGIMAFIDELK   69 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCC---------chhH---HHHHHHcCCEEEEcCCCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999999873         2221   12222222 235679999999999999999


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCcccccCCCCchhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++++|++|||||........+.+.++|++++++|+.+++.+++.++|.|.+.+  .++||++||..+..+.++...|+
T Consensus        70 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~  149 (236)
T PRK06483         70 QHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYA  149 (236)
T ss_pred             hhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHH
Confidence            9999999999999986555566778999999999999999999999999998765  58999999999888889999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      ++|+++++|+++++.|+++ +|+||+|+||++ ++
T Consensus       150 asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~  183 (236)
T PRK06483        150 ASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFN  183 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecC
Confidence            9999999999999999988 599999999998 54

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=222.02  Aligned_cols=186  Identities=24%  Similarity=0.356  Sum_probs=161.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .+++|+++||||+++||++++++|+++|++|++++|         +....++..+++......+.+|.+|..+...+++.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGR---------DPASLEAARAELGESALVIRADAGDVAAQKALAQA   73 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC---------CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH
Confidence            567899999999999999999999999999999977         44444444444422223456688888888899999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.|+|...  +++|+++|..+..+.++...|+
T Consensus        74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~i~~~S~~~~~~~~~~~~Y~  151 (249)
T PRK06500         74 LAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP--ASIVLNGSINAHIGMPNSSVYA  151 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechHhccCCCCccHHH
Confidence            99999999999999998776777889999999999999999999999999998653  7999999988989999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++|+++++++++++.|++++||++++|+||++ |++..
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~  189 (249)
T PRK06500        152 ASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYG  189 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHH
Confidence            99999999999999999999999999999999 77654

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-33  Score=246.28  Aligned_cols=190  Identities=30%  Similarity=0.405  Sum_probs=170.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .++++++|||||++|||+++|++|+++|++|++++|         +....+++.++++..+.   .+.+|++|.++++++
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  382 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI---------DEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAF  382 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            456789999999999999999999999999999987         66666666666655443   345688998889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|+||||||....+++.+.+.++|+.++++|+.+++.+++.++|.|.+++ .|+||++||.++..+.++.
T Consensus       383 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  462 (582)
T PRK05855        383 AEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL  462 (582)
T ss_pred             HHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC
Confidence            999999999999999999998878888999999999999999999999999999998765 4899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..|++||+++++++++|+.|++++||+|++|+||+| |++....
T Consensus       463 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        463 PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence            999999999999999999999999999999999999 7776654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-33  Score=222.65  Aligned_cols=189  Identities=28%  Similarity=0.341  Sum_probs=157.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .+++|++|||||++|||+++|+.|+++|++|++.+++        +....+....++......+.+|+.|.++++.+++.
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQ--------SEDAAEALADELGDRAIALQADVTDREQVQAMFAT   73 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCC--------CHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999987542        23333333333322223355688888888999999


Q ss_pred             HHHhcCC-ccEEEeccCCCC------CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         86 ALENFGR-IDIVINNAGILR------DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        86 ~~~~~~~-id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      +.+.+++ +|++|||||...      ..++.+.+.++|++++++|+.+++.+++.++|.|...+.|+||++||..+..+.
T Consensus        74 ~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  153 (253)
T PRK08642         74 ATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPV  153 (253)
T ss_pred             HHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC
Confidence            8888887 999999998642      245778899999999999999999999999999987777999999998877777


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+...|+++|+++++++++++.|++++||+||+|+||++ |+...
T Consensus       154 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~  198 (253)
T PRK08642        154 VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS  198 (253)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh
Confidence            778899999999999999999999999999999999999 65544

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-33  Score=221.28  Aligned_cols=188  Identities=31%  Similarity=0.563  Sum_probs=162.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++|         +.. .....+++...+.   .+.+|+.+..+++.+
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r---------~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   72 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDI---------SPE-IEKLADELCGRGHRCTAVVADVRDPASVAAA   72 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC---------CHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence            578899999999999999999999999999999987         332 2223333333222   346788888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc-cccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~  161 (223)
                      ++.+.++++++|+||||||.....++.+.+.+++++++++|+.+++.+++.++|++.+.+.++||++||..+ ..+.++.
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  152 (263)
T PRK08226         73 IKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGE  152 (263)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCc
Confidence            999999999999999999987777888889999999999999999999999999998776789999999877 4567888


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+++|+++++++++++.|++++||+|++|+||++ |++...
T Consensus       153 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~  195 (263)
T PRK08226        153 TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES  195 (263)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHh
Confidence            999999999999999999999999999999999999 776543

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=223.89  Aligned_cols=186  Identities=25%  Similarity=0.338  Sum_probs=164.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+|++|||||++|||++++++|+++|++|++++|         +....+...+.+......+.+|+.|..+++..++.+.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATAR---------DTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAV   72 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999987         4444444333333233345678888888989999998


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      +.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.+++.+.++||++||..+..+.++...|+++
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  152 (275)
T PRK08263         73 EHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHAS  152 (275)
T ss_pred             HHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHH
Confidence            88999999999999988888889999999999999999999999999999988777899999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |++++.++++++.|+++.||+|++|+||.+ |++..
T Consensus       153 Kaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        153 KWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence            999999999999999999999999999999 76664

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=5.2e-33  Score=219.84  Aligned_cols=186  Identities=30%  Similarity=0.480  Sum_probs=162.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||++|||+++|++|+++|++|+++++.        +....+...+++...+.   .+.+|+.+..+++.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   73 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHS--------DEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDK   73 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC--------ChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            5799999999999999999999999999988652        34445555555554443   345688888889999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.++++++|+||||+|.....++.+.+.++|++++++|+.+++.+++.+.++|.+++ .|+||++||..+..+.++...|
T Consensus        74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y  153 (256)
T PRK12743         74 LIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAY  153 (256)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchh
Confidence            999999999999999987767778889999999999999999999999999997653 4899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +++|+++++++++++.+++++||++|+|+||++ |++..
T Consensus       154 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~  192 (256)
T PRK12743        154 TAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG  192 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccc
Confidence            999999999999999999999999999999999 66543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=8e-34  Score=222.60  Aligned_cols=177  Identities=33%  Similarity=0.511  Sum_probs=156.8

Q ss_pred             cCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccccccCCccchHHHHHHHHHhc-
Q psy16220         16 GAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAVPNYNSVVDGDKIVQTALENF-   90 (223)
Q Consensus        16 Ga~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-   90 (223)
                      |++  +|||+++|+.|+++|++|++++|         +.+..+...+++.+...  .+.+|+++.++++.+++++.+.+ 
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~---------~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDR---------NEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEES---------SHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcC
Confidence            566  99999999999999999999988         66654444444444322  35679999999999999999999 


Q ss_pred             CCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         91 GRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        91 ~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      +++|+||||++....    .++.+.+.++|+..+++|+.+++.+++.+.|+|.+.  |+||++||..+..+.++...|++
T Consensus        72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~  149 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSA  149 (241)
T ss_dssp             SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHH
T ss_pred             CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHH
Confidence            999999999998765    778889999999999999999999999999988887  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-cccccc
Q psy16220        167 AKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +|+|+++|+|+|+.|+++ +|||||+|+||++ |++...
T Consensus       150 sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~  188 (241)
T PF13561_consen  150 SKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER  188 (241)
T ss_dssp             HHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc
Confidence            999999999999999999 9999999999999 766443

...

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=221.42  Aligned_cols=188  Identities=25%  Similarity=0.397  Sum_probs=159.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   80 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+         .... +..+++.+.+.   .+.+|+++.++++
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~---------~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~   71 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS---------APDD-EFAEELRALQPRAEFVQVDLTDDAQCR   71 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC---------hhhH-HHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            467899999999999999999999999999999999873         2222 33444444333   3456888888888


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ..++++.+.++++|+||||||......+.... ++|+..+++|+.+++.+.+.++|.+++.. ++||++||..+..+.++
T Consensus        72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~~~~~~~  149 (258)
T PRK08628         72 DAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR-GAIVNISSKTALTGQGG  149 (258)
T ss_pred             HHHHHHHHhcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC-cEEEEECCHHhccCCCC
Confidence            99999989999999999999976544444444 99999999999999999999999987654 89999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+++++++++++.|+.++||+|++|+||.+ |++...
T Consensus       150 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~  193 (258)
T PRK08628        150 TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN  193 (258)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH
Confidence            9999999999999999999999999999999999999 765443

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-33  Score=219.33  Aligned_cols=191  Identities=22%  Similarity=0.291  Sum_probs=157.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ..+++|++|||||++|||+++|++|+++|++|+++++...+     +....+...+++...+.   .+..|++|.+++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   78 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAA-----SKADAEETVAAVKAAGAKAVAFQADLTTAAAVEK   78 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCcc-----chHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHH
Confidence            45789999999999999999999999999997777653221     33344444455544332   34679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.|+|.+.  +++++++|.....+.++.
T Consensus        79 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~~~~~  156 (257)
T PRK12744         79 LFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTPFY  156 (257)
T ss_pred             HHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcccCCCc
Confidence            999999999999999999998777778889999999999999999999999999998754  788877443333345778


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|++||+|+++|+++++.|+.++||+|++|+||++ |++..
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~  198 (257)
T PRK12744        157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY  198 (257)
T ss_pred             ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence            999999999999999999999999999999999999 76543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-33  Score=220.35  Aligned_cols=180  Identities=29%  Similarity=0.375  Sum_probs=159.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----CCccccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   83 (223)
                      +|++|||||+++||++++++|+++|++|++++|         +....+...+++...     ...+.+|+++.++++.++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   72 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADI---------NSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALS   72 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHH
Confidence            589999999999999999999999999999987         444444444444432     224466888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~  162 (223)
                      +++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+++.|.+.+ .++||++||..+..+.+...
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~  152 (259)
T PRK12384         73 RGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNS  152 (259)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCc
Confidence            99999999999999999988777888899999999999999999999999999998765 68999999998888888899


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +|+++|+++++++++++.|++++||+|++|.||.+
T Consensus       153 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~  187 (259)
T PRK12384        153 GYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNL  187 (259)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCc
Confidence            99999999999999999999999999999999976

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-33  Score=219.34  Aligned_cols=187  Identities=29%  Similarity=0.413  Sum_probs=163.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++|         +....+....++...+   ..+..|++|.++++.+
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR---------TAERLDEVAAEIDDLGRRALAVPTDITDEDQCANL   72 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHH
Confidence            467899999999999999999999999999999987         4455555555554332   2456788888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++.+.++++++|++|||||.... .++.+.+.++|++++++|+.+++.+++.+.+.|.+.+ ++||++||..+..+.++.
T Consensus        73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~  151 (258)
T PRK07890         73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKY  151 (258)
T ss_pred             HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCc
Confidence            99999999999999999997643 6677889999999999999999999999999987654 799999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|+++|++++.++++++.|++++||++++|+||++ ++...
T Consensus       152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~  193 (258)
T PRK07890        152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLK  193 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHH
Confidence            999999999999999999999999999999999999 76543

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-33  Score=220.21  Aligned_cols=186  Identities=29%  Similarity=0.483  Sum_probs=165.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   86 (223)
                      |++|||||++|||++++++|+++|++|++++|         +....++...++...+..   +.+|+.|..+++.+++.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i   71 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADV---------NEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQAC   71 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            47999999999999999999999999999987         555566666666544333   456888888888999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|++
T Consensus        72 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  151 (270)
T PRK05650         72 EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNV  151 (270)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHH
Confidence            88999999999999988778888899999999999999999999999999998877789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +|+++++++++|+.|+++.||++++|+||++ |++..+.
T Consensus       152 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        152 AKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc
Confidence            9999999999999999999999999999999 7765543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.2e-33  Score=218.08  Aligned_cols=187  Identities=26%  Similarity=0.364  Sum_probs=163.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      +.++++|||||++|||++++++|+++|++|++. +|         +....++..++++..+.   .+.+|+.|..+++.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYAR---------SRKAAEETAEEIEALGRKALAVKANVGDVEKIKEM   72 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            457899999999999999999999999998774 44         44555555555554433   345688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|+||||||.....++.+.+.++|+.++++|+.+++.+++++++++.+++.|+||++||..+..+.++..
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  152 (250)
T PRK08063         73 FAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYT  152 (250)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcc
Confidence            99999999999999999998777788889999999999999999999999999999888779999999998888888999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .|+++|++++.++++++.++.+.||++++|.||++ +++..
T Consensus       153 ~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~  193 (250)
T PRK08063        153 TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALK  193 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhh
Confidence            99999999999999999999999999999999999 66543

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-33  Score=218.63  Aligned_cols=186  Identities=26%  Similarity=0.353  Sum_probs=164.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   84 (223)
                      ++|++|||||+++||++++++|+++|++|++++|         +....+.+.+.++..+.   .+..|+.|.+++.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVAR---------SQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIA   75 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHH
Confidence            4689999999999999999999999999999987         55555555555544322   34568888888899999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      .+.+.++++|+||||||.....++.+.+.++++.++++|+.+++.+++.+++++.+.+.++||++||..+..+.++...|
T Consensus        76 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  155 (241)
T PRK07454         76 ELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAY  155 (241)
T ss_pred             HHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHH
Confidence            99999999999999999877677788899999999999999999999999999988777999999999998899999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +++|++++.++++++.|+++.||++++|.||++ |++..
T Consensus       156 ~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~  194 (241)
T PRK07454        156 CVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD  194 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence            999999999999999999999999999999999 76644

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=4.5e-33  Score=218.48  Aligned_cols=190  Identities=34%  Similarity=0.530  Sum_probs=163.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++++++++|||||+++||++++++|+++|+.|++.+|         +....+...+.+......+..|+.+.++++.+++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT---------RVEKLEALAAELGERVKIFPANLSDRDEVKALGQ   72 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            3678999999999999999999999999999988766         4444444433332222234568888888999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.+.+.+.+.++||++||..+..+.++...|
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  152 (245)
T PRK12936         73 KAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANY  152 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcch
Confidence            99999999999999999877777788889999999999999999999999998877777899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|+++.++++.++.++.+.||++++|+||++ +++...
T Consensus       153 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~  192 (245)
T PRK12936        153 CASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK  192 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence            999999999999999999999999999999999 655543

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=5.7e-33  Score=225.89  Aligned_cols=187  Identities=24%  Similarity=0.297  Sum_probs=158.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.. ...+..|++|..+++++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R---------~~~~~~~~~~~l~~-v~~~~~Dl~d~~~v~~~~~   91 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR---------RPDVAREALAGIDG-VEVVMLDLADLESVRAFAE   91 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhhh-CeEEEccCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999987         55555555555432 3456679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--------  156 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~--------  156 (223)
                      ++.+.++++|+||||||....  ..+.+.++|+..+++|+.+++.+++.++|.+.+.+.++||++||..+..        
T Consensus        92 ~~~~~~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~  169 (315)
T PRK06196         92 RFLDSGRRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDP  169 (315)
T ss_pred             HHHhcCCCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcccc
Confidence            998889999999999997542  2355678899999999999999999999999887678999999975532        


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        157 ----GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 ----~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                          +.++...|+.||+++..+++.++.+++++||+|++|+||++ |++...
T Consensus       170 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~  221 (315)
T PRK06196        170 HFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRH  221 (315)
T ss_pred             CccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcccc
Confidence                23456789999999999999999999999999999999999 776543

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-33  Score=218.42  Aligned_cols=190  Identities=34%  Similarity=0.530  Sum_probs=166.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++|++|||||+++||.++|++|+++|++|++++|         +....+...+++..  ....+.+|++|..++++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADR---------DAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALV   72 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecC---------CHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            578999999999999999999999999999999987         44444444444431  1223456888999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+.++++++|+||||+|.....++.+.+.+++++++++|+.+++.+.+.+++.|++.+.++||++||..+..+.++...
T Consensus        73 ~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~  152 (252)
T PRK06138         73 DFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAA  152 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccH
Confidence            99999999999999999987777778889999999999999999999999999999887789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |+.+|++++.++++++.|+.++||++++|+||.+ +++..+.
T Consensus       153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  194 (252)
T PRK06138        153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI  194 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh
Confidence            9999999999999999999999999999999999 7665543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-32  Score=217.36  Aligned_cols=197  Identities=19%  Similarity=0.231  Sum_probs=163.5

Q ss_pred             ccCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCC--CChhhhhHHHHHHHHhC---CccccccCCccc
Q psy16220          6 RFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDG--KSSKAADTVVAEIRSKG---GKAVPNYNSVVD   78 (223)
Q Consensus         6 ~~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   78 (223)
                      ++++|++|||||++  |||.++|++|+++|++|++++|++.+....  ........+.+++...+   ..+.+|+++..+
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            46789999999994  999999999999999999998853221100  01111111333343322   345678888888


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++.+++.+.++++++|+||||||.....++.+.+.+++++.+++|+.+++.+.+.+++.|.+.+.++||++||..+..+.
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence            99999999999999999999999877777888899999999999999999999999999987767899999999998888


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++...|+++|+++++++++++.|+.+.||+|++|+||++ |++..
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~  206 (256)
T PRK12748        162 PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT  206 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence            899999999999999999999999999999999999999 66543

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=216.81  Aligned_cols=194  Identities=28%  Similarity=0.435  Sum_probs=169.5

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   77 (223)
                      ||-..++++|+++||||+++||+++++.|+++|++|++++|         +.+..+.+..++.....   .+.+|+.+.+
T Consensus         1 ~~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~   71 (258)
T PRK06949          1 MGRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASR---------RVERLKELRAEIEAEGGAAHVVSLDVTDYQ   71 (258)
T ss_pred             CCcccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence            67667889999999999999999999999999999999987         55566666555544322   3556888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--------CCcEEEE
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--------YGRLVMT  149 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~v  149 (223)
                      +++++++++.++++++|++|||+|.....++.+.+.++|+.++++|+.+++.+++.++|.|.+..        .+++|++
T Consensus        72 ~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~  151 (258)
T PRK06949         72 SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINI  151 (258)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEE
Confidence            89999999988999999999999987767777888999999999999999999999999987653        3799999


Q ss_pred             ecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        150 ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       150 sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ||..+..+.+...+|+++|++++.++++++.++.++||+|++|+||++ |++...
T Consensus       152 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~  206 (258)
T PRK06949        152 ASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH  206 (258)
T ss_pred             CcccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchh
Confidence            999998888899999999999999999999999999999999999999 766543

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=218.95  Aligned_cols=185  Identities=31%  Similarity=0.452  Sum_probs=162.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc----cccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK----AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~   85 (223)
                      |+++||||++|||+++|++|+++|++|++++|         +....++..+++...+..    ..+|+.|.++++.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDR---------DADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD   71 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence            47999999999999999999999999999877         555556666666543332    35788888889999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+.++++|+||||+|.....++.+.+.++|+..+++|+.+++.+++.++|.|.+. +.++||++||..+..+.++...|
T Consensus        72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y  151 (272)
T PRK07832         72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAY  151 (272)
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcch
Confidence            98999999999999998777778889999999999999999999999999999764 35899999999988899999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|+++.+++++++.|++++||+|++|+||.+ |++..+
T Consensus       152 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~  191 (272)
T PRK07832        152 SASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNT  191 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhc
Confidence            999999999999999999999999999999999 776554

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-33  Score=219.99  Aligned_cols=183  Identities=28%  Similarity=0.360  Sum_probs=162.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++++++||||++|||++++++|+++|++|++++|+...         ...     ......+.+|+.|.++++++++.+.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~---------~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~   68 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR---------AAP-----IPGVELLELDVTDDASVQAAVDEVI   68 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh---------ccc-----cCCCeeEEeecCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999884221         111     0122345779999999999999999


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      ++++++|+||||||....+++.+.+.+++++++++|+.+++.+++.++|+|++.+.++||++||..+..+.++...|+++
T Consensus        69 ~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  148 (270)
T PRK06179         69 ARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAAS  148 (270)
T ss_pred             HhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHH
Confidence            99999999999999887788888999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |++++.++++++.|++++||++++|.||++ |++..+.
T Consensus       149 K~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        149 KHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence            999999999999999999999999999999 7665543

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=218.06  Aligned_cols=185  Identities=29%  Similarity=0.427  Sum_probs=162.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH-HhCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      |++|||||++|||++++++|+++|++|++++|         +....+++.+.+. .....+.+|+.|..+++++++.+.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   72 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDI---------NEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAA   72 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999987         5555555544443 1223446788888888888888877


Q ss_pred             h-cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         89 N-FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        89 ~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      + ++++|+||||||.....++.+.+.++++.++++|+.+++.+++.+.++|+..+.++||++||..+..+.++...|+.|
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  152 (260)
T PRK08267         73 ATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSAT  152 (260)
T ss_pred             HcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHH
Confidence            6 789999999999887778888999999999999999999999999999998877999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++++++++++.+++++||++++|.||.+ |++...
T Consensus       153 Kaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        153 KFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence            999999999999999999999999999999 766553

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.8e-32  Score=212.71  Aligned_cols=190  Identities=28%  Similarity=0.503  Sum_probs=165.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ..+++++++|||++++||++++++|+++|++|++++|         +....++..+++...+.   .+..|+.+..+++.
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   73 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLAR---------TEENLKAVAEEVEAYGVKVVIATADVSDYEEVTA   73 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHH
Confidence            3467899999999999999999999999999999987         44445555555544332   24568888888889


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.++++++|++|||+|.....++.+.+.++|++++++|+.+++.+.+.+.+.+.+.+.+++|++||..+..+.++.
T Consensus        74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~  153 (239)
T PRK07666         74 AIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT  153 (239)
T ss_pred             HHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC
Confidence            99999889999999999999876667778899999999999999999999999999988877899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+.+|+++..+++.++.|++++||++++|+||.+ +++...
T Consensus       154 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~  196 (239)
T PRK07666        154 SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD  196 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh
Confidence            999999999999999999999999999999999999 665543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=8.4e-33  Score=218.68  Aligned_cols=184  Identities=25%  Similarity=0.293  Sum_probs=155.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--C---CccccccCCccchHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAE----RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--G---GKAVPNYNSVVDGDK   81 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~   81 (223)
                      ++|||||++|||+++|++|++    +|++|++++|         +....+++.++++..  +   ..+.+|++|.+++++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~   72 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSAR---------NDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQ   72 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEc---------CHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHH
Confidence            689999999999999999997    7999999987         666666666666542  1   234568889888999


Q ss_pred             HHHHHHHhcCCc----cEEEeccCCCCC--CCCCCC-CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecC
Q psy16220         82 IVQTALENFGRI----DIVINNAGILRD--KSFARI-SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASN  152 (223)
Q Consensus        82 ~~~~~~~~~~~i----d~li~~ag~~~~--~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~  152 (223)
                      +++.+.+.++.+    |+||||||....  ....+. +.++|++++++|+.+++.+++.++|.|.+.+  .++||++||.
T Consensus        73 ~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~  152 (256)
T TIGR01500        73 LLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL  152 (256)
T ss_pred             HHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCH
Confidence            999988877653    699999997543  223333 5789999999999999999999999998652  4799999999


Q ss_pred             cccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        153 SGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       153 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       153 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  204 (256)
T TIGR01500       153 CAIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ  204 (256)
T ss_pred             HhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH
Confidence            999999999999999999999999999999999999999999999 776653

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=218.06  Aligned_cols=187  Identities=24%  Similarity=0.374  Sum_probs=163.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   83 (223)
                      +++++++|||||++|||++++++|+++|++|++++|         +....++...++..  ....+.+|++|..+++.++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   72 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGR---------NAEKLEALAARLPYPGRHRWVVADLTSEAGREAVL   72 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            467899999999999999999999999999999987         55555555444421  1223456888888888888


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+.+ ++++|+||||||.....++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...
T Consensus        73 ~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  151 (263)
T PRK09072         73 ARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYAS  151 (263)
T ss_pred             HHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccH
Confidence            88765 78999999999987777788899999999999999999999999999998887789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |+++|+++.+++++++.|+++.||+|++|+||++ |++..
T Consensus       152 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~  191 (263)
T PRK09072        152 YCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS  191 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh
Confidence            9999999999999999999999999999999999 66544

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=216.99  Aligned_cols=187  Identities=18%  Similarity=0.241  Sum_probs=155.0

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhh-hhHHHHHHHHhCC----ccccccCCccchH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKA-ADTVVAEIRSKGG----KAVPNYNSVVDGD   80 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~   80 (223)
                      -+++++|||||++|||+++|++|+++| ++|++++|         +... .++..++++..+.    .+.+|++|..+.+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r---------~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~   76 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAAL---------PDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHP   76 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeC---------CcchhHHHHHHHHHhcCCCceEEEEecCCChHHHH
Confidence            367899999999999999999999995 99999987         4333 5555556655332    3456888888888


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +.++++.+ ++++|++|||+|..........+.++..+++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus        77 ~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~  155 (253)
T PRK07904         77 KVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS  155 (253)
T ss_pred             HHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC
Confidence            88888876 58999999999975432222224455667899999999999999999999888899999999988888888


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+++.+|+++|+.|+.++||+|++|+||++ |++..+
T Consensus       156 ~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~  199 (253)
T PRK07904        156 NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH  199 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc
Confidence            8999999999999999999999999999999999999 766654

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-33  Score=218.19  Aligned_cols=188  Identities=34%  Similarity=0.535  Sum_probs=161.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .++||++|||||++|||.+++++|+++|++|++++|         +....+...+++.  ...+.+|+.+.+++++++++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~   72 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDI---------DPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDT   72 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999987         4444443333332  23466799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-CCc
Q psy16220         86 ALENFGRIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQA  162 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~~  162 (223)
                      +.+.++++|++|||||....  .++.+.+.+.|++++++|+.+++.+++.++|+|++++.++||++||..+..+.+ +..
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~  152 (255)
T PRK06057         73 AAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQI  152 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCc
Confidence            98888999999999997643  456678899999999999999999999999999887778999999988777764 778


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|+++|+++++++++++.++.++||+|++|+||.+ |++....
T Consensus       153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~  195 (255)
T PRK06057        153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL  195 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh
Confidence            89999999999999999999999999999999999 7765543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.8e-32  Score=213.68  Aligned_cols=189  Identities=37%  Similarity=0.677  Sum_probs=164.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|+++||||++|||.++|++|+++|++|++..+.        +....++..+++...+.   .+.+|+.|..++.++
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   74 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS--------SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRL   74 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC--------cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            4678999999999999999999999999999876541        33444455555554332   345688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|+||||||.....++.+.+.+.+++++++|+.+++.+++.++|.+.+.+.++||++||..+..+.++..
T Consensus        75 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  154 (247)
T PRK12935         75 VEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQT  154 (247)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCc
Confidence            99999999999999999998777777788899999999999999999999999999877778999999999988889999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .|+++|+++++++++++.|+.+.||+++.|.||.+ +++..
T Consensus       155 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  195 (247)
T PRK12935        155 NYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA  195 (247)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh
Confidence            99999999999999999999999999999999999 65544

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=213.31  Aligned_cols=187  Identities=34%  Similarity=0.464  Sum_probs=161.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||+++||+++|++|+++|++++++.++        +....+...+++...+.   .+.+|+.+..+++++
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG--------SAAAADELVAEIEAAGGRAIAVQADVADAAAVTRL   73 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC--------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            4678999999999999999999999999999888652        22334444455544332   345688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.++++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+++.|...  ++||++||..+..+.++..
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~~~~~~~~  151 (245)
T PRK12937         74 FDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG--GRIINLSTSVIALPLPGYG  151 (245)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC--cEEEEEeeccccCCCCCCc
Confidence            99999999999999999998776778888999999999999999999999999998653  7999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .|+++|++++.++++++.|+.+.||++++|+||++ |++..
T Consensus       152 ~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~  192 (245)
T PRK12937        152 PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF  192 (245)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence            99999999999999999999999999999999999 77643

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-32  Score=214.90  Aligned_cols=190  Identities=33%  Similarity=0.502  Sum_probs=165.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   83 (223)
                      +++++++|||||+++||.+++++|+++|++|++++|         +....+.....+..  ....+.+|+.|..+++.++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDR---------NEEAAERVAAEILAGGRAIAVAADVSDEADVEAAV   72 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            477899999999999999999999999999999988         55555554444442  1224567888889999999


Q ss_pred             HHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      +++.++++++|+||||+|... ..++.+.+.++|++.+++|+.+++.+++.+++.+.+.+.++||++||..+..+.++..
T Consensus        73 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  152 (251)
T PRK07231         73 AAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLG  152 (251)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCch
Confidence            999888999999999999754 3567788999999999999999999999999999887778999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|+.+|++++.++++++.+++++||++++++||++ |++....
T Consensus       153 ~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~  195 (251)
T PRK07231        153 WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF  195 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh
Confidence            99999999999999999999999999999999999 7665544

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=218.02  Aligned_cols=181  Identities=22%  Similarity=0.272  Sum_probs=158.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||++++++|+++|++|++++|         +....+...+   .....+.+|+.+.++++++++.+.+.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   69 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATAR---------KAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAE   69 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999987         4333332211   11223457889988999999999889


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                      ++++|+||||||....+++.+.+.+++++.+++|+.+++.+++.++|.|.+. .|+||++||..+..+.++...|+++|+
T Consensus        70 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  148 (274)
T PRK05693         70 HGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKA  148 (274)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHH
Confidence            9999999999998777788888999999999999999999999999998764 489999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++.++++++.|++++||+|++|+||+| |++..+
T Consensus       149 al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        149 AVHALSDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            9999999999999999999999999999 776654

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-32  Score=216.95  Aligned_cols=186  Identities=26%  Similarity=0.368  Sum_probs=162.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .|++|||||+++||++++++|+++|++|++++|         +....+.+.+........+.+|++|..+++++++++.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVR---------RPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA   72 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999999999987         44444444333332333456799999999999999988


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      .++++|+||||||.....+..+.+.+++++.+++|+.+++.+++.++|+|++.+.++||++||..+..+.++...|++||
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  152 (276)
T PRK06482         73 ALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATK  152 (276)
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHH
Confidence            89999999999998877778888999999999999999999999999999887778999999999888889999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++++.++++++.++.++||+++.+.||.+ |++...
T Consensus       153 ~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        153 WGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence            99999999999999999999999999999 766543

>KOG1209|consensus

Probab=100.00  E-value=4.8e-33  Score=204.69  Aligned_cols=188  Identities=18%  Similarity=0.166  Sum_probs=162.5

Q ss_pred             cCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          7 FDGRVAIVTGAG-AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         7 ~~~~~~lItGa~-~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      -+.|.+||||++ ||||.++|++|+++||.|+.+.|.         .+.-..+.  +.........|+.+++++..+..+
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~---------~e~M~~L~--~~~gl~~~kLDV~~~~~V~~v~~e   73 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARR---------LEPMAQLA--IQFGLKPYKLDVSKPEEVVTVSGE   73 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccc---------cchHhhHH--HhhCCeeEEeccCChHHHHHHHHH
Confidence            356899999985 899999999999999999999873         33322222  122234556799999999999999


Q ss_pred             HHH-hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         86 ALE-NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~-~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +++ .+|++|+|+||||..-..|..+.+.++.++.+++|++|..++.+++... .-+..|.||+++|..+..|.|..+.|
T Consensus        74 vr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~-likaKGtIVnvgSl~~~vpfpf~~iY  152 (289)
T KOG1209|consen   74 VRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHF-LIKAKGTIVNVGSLAGVVPFPFGSIY  152 (289)
T ss_pred             HhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHH-HHHccceEEEecceeEEeccchhhhh
Confidence            888 6799999999999877788899999999999999999999999999844 44445999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ++||+|+.++++.|+.|++|+||+|..+.||-| |++.++.++
T Consensus       153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~l~  195 (289)
T KOG1209|consen  153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADKRLP  195 (289)
T ss_pred             hHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccCCCc
Confidence            999999999999999999999999999999999 888887654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2e-32  Score=215.84  Aligned_cols=184  Identities=30%  Similarity=0.486  Sum_probs=162.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +.+++|++|||||+++||++++++|+++|++|++++|+         .      ..........+.+|+.+.++++++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~---------~------~~~~~~~~~~~~~D~~~~~~~~~~~~   68 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA---------F------LTQEDYPFATFVLDVSDAAAVAQVCQ   68 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc---------h------hhhcCCceEEEEecCCCHHHHHHHHH
Confidence            56889999999999999999999999999999999873         2      01111122345679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+.++++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+++.|++++.++||++||..+..+.++...|
T Consensus        69 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  148 (252)
T PRK08220         69 RLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAY  148 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchh
Confidence            99999999999999999877777888899999999999999999999999999988777899999999999898999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++.++++++.|++++||+|++|.||++ |++...
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~  188 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRT  188 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhh
Confidence            999999999999999999999999999999999 766543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-32  Score=215.55  Aligned_cols=190  Identities=28%  Similarity=0.447  Sum_probs=163.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||+++||.++|++|+++|++|++++|         +....+...+++...+.   .+.+|++|.++++++
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~   79 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSAR---------KAEELEEAAAHLEALGIDALWIAADVADEADIERL   79 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            467899999999999999999999999999999987         55555555555554332   356788888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH-HHhcCCCcEEEEecCcccccCCC-
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFG-  160 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~g~iv~vsS~~~~~~~~~-  160 (223)
                      ++++.+.++++|++|||||.....+..+.+.+.|++++++|+.+++.+++.+.++ +.+++.++||++||..+..+.++ 
T Consensus        80 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~  159 (259)
T PRK08213         80 AEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE  159 (259)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc
Confidence            9999998999999999999876667778899999999999999999999999998 77766789999999887776554 


Q ss_pred             ---CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 ---QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ---~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                         ...|+++|++++.++++++.++.++||+++.|+||.+ |++..+.
T Consensus       160 ~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~  207 (259)
T PRK08213        160 VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT  207 (259)
T ss_pred             ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh
Confidence               4889999999999999999999999999999999999 6654443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-32  Score=215.41  Aligned_cols=190  Identities=33%  Similarity=0.527  Sum_probs=166.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||+++||+++++.|+++|++|++++|         +....++..+++.+.+..   +..|+.|..+++.+
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   74 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADL---------NQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAG   74 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC---------ChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHH
Confidence            477899999999999999999999999999999987         555555556666554433   45688888888899


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHH-HhcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|+||||||.....+..+.+.++++.++++|+.+++.+++.+++.+ +..+.++||++||..+..+.++.
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~  154 (262)
T PRK13394         75 IDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLK  154 (262)
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCC
Confidence            99988889999999999998777777788899999999999999999999999999 66667899999999888888889


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..|+++|+++++++++++.++++.+|++++|.||.+ ++...+.
T Consensus       155 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~  198 (262)
T PRK13394        155 SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ  198 (262)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh
Confidence            999999999999999999999999999999999999 6655433

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=223.27  Aligned_cols=188  Identities=22%  Similarity=0.266  Sum_probs=155.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----CCccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   79 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+.     ...+.+|+.|..++
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v   82 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVR---------NLDKGKAAAARITAATPGADVTLQELDLTSLASV   82 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHH
Confidence            4678999999999999999999999999999999987         555555555555432     11345689999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---  156 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---  156 (223)
                      +++++++.++++++|+||||||....  ....+.++++.++++|+.+++.+++.++|.+++.+.++||++||.++..   
T Consensus        83 ~~~~~~~~~~~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~  160 (306)
T PRK06197         83 RAAADALRAAYPRIDLLINNAGVMYT--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA  160 (306)
T ss_pred             HHHHHHHHhhCCCCCEEEECCccccC--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC
Confidence            99999999999999999999997643  2356778899999999999999999999999987778999999976543   


Q ss_pred             ----------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEE--eCCCc-cccccc
Q psy16220        157 ----------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVI--VPTAA-SRLTED  203 (223)
Q Consensus       157 ----------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v--~Pg~v-t~~~~~  203 (223)
                                +.++...|+.||++++.++++|+.++++.|++|+++  +||+| |++..+
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~  220 (306)
T PRK06197        161 IHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN  220 (306)
T ss_pred             CCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccccc
Confidence                      234567899999999999999999999888777655  69999 776554

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-32  Score=219.44  Aligned_cols=189  Identities=25%  Similarity=0.415  Sum_probs=161.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ..+++|++|||||++|||.++|++|+++|++|++++|+.        ....+...+.++..+.   .+.+|++|.++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  113 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDE--------HEDANETKQRVEKEGVKCLLIPGDVSDEAFCKD  113 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--------chHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            356789999999999999999999999999999998732        1223333344443332   34668888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.+++.|+..  ++||++||..+..+.++
T Consensus       114 ~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g~iV~isS~~~~~~~~~  191 (290)
T PRK06701        114 AVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--SAIINTGSITGYEGNET  191 (290)
T ss_pred             HHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--CeEEEEecccccCCCCC
Confidence            99999999999999999999764 3567788999999999999999999999999998654  79999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|+++|++++.++++++.++.++||+|++|+||.+ |++...
T Consensus       192 ~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        192 LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence            9999999999999999999999999999999999999 776544

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-32  Score=212.38  Aligned_cols=189  Identities=32%  Similarity=0.498  Sum_probs=166.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|+++||||+++||+++|++|+++|++|++++|         +....+...+++++.+.   .+..|+.|.++++++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   74 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDG---------LAAEARELAAALEAAGGRAHAIAADLADPASVQRF   74 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            467899999999999999999999999999999876         55555555555554332   345688888888999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++.+.+.++++|+||||+|.....++.+.+.++|+.++++|+.+++.+++.+.|.+.+.+.|++|++||..+..+.++..
T Consensus        75 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  154 (250)
T PRK12939         75 FDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLG  154 (250)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcc
Confidence            99998999999999999998777778889999999999999999999999999999887778999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|+++|++++.+++.++.++.+++|++++|.||.+ |++...
T Consensus       155 ~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (250)
T PRK12939        155 AYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY  196 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence            99999999999999999999999999999999999 766543

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=5.6e-32  Score=213.50  Aligned_cols=186  Identities=31%  Similarity=0.419  Sum_probs=164.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   86 (223)
                      |+++|||++++||++++++|+++|++|++++|         +....++..+++...+.   .+..|++|.+++.++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~   71 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADL---------NEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQA   71 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            58999999999999999999999999999977         55555555566655443   3456888888899999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCchhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      .++++++|+||||+|.....++.+.+.++|++++++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  151 (254)
T TIGR02415        72 AEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYS  151 (254)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchH
Confidence            99999999999999987777888999999999999999999999999999998764 37999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++|++++.++++++.|+.+.||+|++|+||++ |++..+.
T Consensus       152 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~  191 (254)
T TIGR02415       152 STKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEI  191 (254)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhh
Confidence            99999999999999999999999999999999 7765443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-32  Score=211.43  Aligned_cols=186  Identities=24%  Similarity=0.287  Sum_probs=162.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-----CccccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   83 (223)
                      +|++|||||++|||++++++|+++|++|++++|         +....++..+++....     ..+.+|+++.+++++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCAR---------RTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVF   72 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHH
Confidence            679999999999999999999999999999987         5555555555554331     23456999988999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-Cc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-QA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~  162 (223)
                      +++.++++++|++|||||.....++.+.+.+.+++++++|+.+++.+++.++|.+++.+.++||++||..+..+.++ ..
T Consensus        73 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  152 (248)
T PRK08251         73 AEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKA  152 (248)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcc
Confidence            99999999999999999988777777888899999999999999999999999998877789999999998888875 68


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|+.||++++.+++.++.++.+.||++++|+||++ |++...
T Consensus       153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  194 (248)
T PRK08251        153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK  194 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc
Confidence            99999999999999999999988999999999999 665544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=7.2e-32  Score=212.35  Aligned_cols=184  Identities=21%  Similarity=0.286  Sum_probs=160.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++++||||++|||.++|+.|+++|++|++++|         +....+.+.+.+......+.+|+.|.++++++++.+.+.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   71 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR---------RQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence            37999999999999999999999999999987         555555544444333334567899998899999999899


Q ss_pred             cCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         90 FGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        90 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      ++++|++|||||... ..+..+.+.++|++++++|+.+++.+++.++|++.+.+.++||++||..+..+.++...|+++|
T Consensus        72 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  151 (248)
T PRK10538         72 WRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATK  151 (248)
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHH
Confidence            999999999999753 3567788999999999999999999999999999887778999999999888889999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++++++++.++.|+.++||++++|.||++ ++...
T Consensus       152 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~  186 (248)
T PRK10538        152 AFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFS  186 (248)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccc
Confidence            99999999999999999999999999999 56553

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=213.48  Aligned_cols=193  Identities=26%  Similarity=0.381  Sum_probs=165.2

Q ss_pred             CC-CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCc
Q psy16220          1 MP-EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSV   76 (223)
Q Consensus         1 m~-~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   76 (223)
                      || .+.+...|++|||||+++||+++|++|+++|++|++++|         +.....+..+++...+..   +..|+.+.
T Consensus         1 ~~~~~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   71 (274)
T PRK07775          1 MPRFEPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGAR---------RVEKCEELVDKIRADGGEAVAFPLDVTDP   71 (274)
T ss_pred             CCCCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            45 334566789999999999999999999999999999877         444444444455443332   34688888


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+++++++.+.+.++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+++.+.+++.++||++||..+..
T Consensus        72 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~  151 (274)
T PRK07775         72 DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR  151 (274)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC
Confidence            88999999988889999999999998766677788899999999999999999999999999877778999999999988


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +.++...|+++|++++.++++++.++.+.||++++|+||++ +++..
T Consensus       152 ~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        152 QRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW  198 (274)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence            88889999999999999999999999989999999999998 66543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-32  Score=212.61  Aligned_cols=188  Identities=35%  Similarity=0.586  Sum_probs=167.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||+++||+++|++|+++|++|++++|         +....+...+++...+.   .+.+|+.|..+++.++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   72 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADL---------NDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGI   72 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            46789999999999999999999999999999987         55555555556654332   3566888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....+..+.+.++++.++++|+.+++.+++.+++.|++.+.++||++||..+..+.++...
T Consensus        73 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~  152 (258)
T PRK12429         73 DYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAA  152 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcch
Confidence            99999999999999999988777788889999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++|++++.+++.++.|+++.||++++|.||++ +++...
T Consensus       153 y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~  193 (258)
T PRK12429        153 YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK  193 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh
Confidence            9999999999999999999999999999999999 666543

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-32  Score=215.44  Aligned_cols=186  Identities=27%  Similarity=0.392  Sum_probs=162.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-----CccccccCCccchHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   82 (223)
                      ++|++|||||+++||++++++|+++|++|++++|         +....+...+++...+     ..+.+|+.|.++++. 
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-   71 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMR---------NPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-   71 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-
Confidence            5789999999999999999999999999999987         4444444444443322     234568888888888 


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++..
T Consensus        72 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  151 (280)
T PRK06914         72 FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLS  151 (280)
T ss_pred             HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCc
Confidence            88888889999999999998877778888999999999999999999999999999888778999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|+++|+++++++++++.|++++||++++|+||.+ |+++..
T Consensus       152 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (280)
T PRK06914        152 PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEV  193 (280)
T ss_pred             hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhc
Confidence            99999999999999999999999999999999999 776553

>KOG1014|consensus

Probab=100.00  E-value=1.3e-32  Score=214.16  Aligned_cols=189  Identities=26%  Similarity=0.347  Sum_probs=163.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|++++|||||.|||++.|++||++|.+|++++|         ++++++.+.+|+.+... .+.+...|..+.+...+.+
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsR---------t~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i  118 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISR---------TQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKL  118 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHH
Confidence            3589999999999999999999999999999988         99999999999987655 2333333333333355666


Q ss_pred             HHhcC--CccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         87 LENFG--RIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        87 ~~~~~--~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      .+...  ++.+||||+|...  +..+.+.+.+.++..+.+|+.+...+++.++|.|.+++.|-||++||.++..|.|.++
T Consensus       119 ~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s  198 (312)
T KOG1014|consen  119 LEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLS  198 (312)
T ss_pred             HHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHH
Confidence            65553  5778999999886  5677888888999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .|+++|++++.|+++|+.|+..+||.|.+|.|.+| |.|..-..
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence            99999999999999999999999999999999999 77665444

>KOG4169|consensus

Probab=100.00  E-value=2.7e-33  Score=208.04  Aligned_cols=183  Identities=30%  Similarity=0.434  Sum_probs=155.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-----cccccCCccchH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-----AVPNYNSVVDGD   80 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   80 (223)
                      +++||.+++||+.+|||++++++|+++|..+.+++.         +.+. .+....+++....     +.+|+++..+.+
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~---------~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~   71 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDD---------SEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLE   71 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehh---------hhhC-HHHHHHHhccCCCceEEEEEeccccHHHHH
Confidence            578999999999999999999999999998777754         2222 2233344444332     356999988999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCcEEEEecCccccc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN---YGRLVMTASNSGLLG  157 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~  157 (223)
                      +.++++...||.+|++||+||+...        .+|++++.+|+.|..+-+...+|+|.+++   .|-||++||..|..|
T Consensus        72 ~~f~ki~~~fg~iDIlINgAGi~~d--------kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P  143 (261)
T KOG4169|consen   72 AAFDKILATFGTIDILINGAGILDD--------KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP  143 (261)
T ss_pred             HHHHHHHHHhCceEEEEcccccccc--------hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc
Confidence            9999999999999999999998653        56999999999999999999999998764   578999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhh--hCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIE--GEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e--~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      .|..+.|++||+++.+|+|||+..  |.+.||++++|+||++ |++..+...
T Consensus       144 ~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~  195 (261)
T KOG4169|consen  144 MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDA  195 (261)
T ss_pred             cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHh
Confidence            999999999999999999999877  4577999999999999 777766533

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-32  Score=215.16  Aligned_cols=174  Identities=22%  Similarity=0.234  Sum_probs=145.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+++|||+ +|||+++|++|+ +|++|++++|         +....++..++++..+.   .+.+|++|.+++++++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~   70 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADY---------NEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAAT   70 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence            589999998 699999999996 8999999987         55555555566654332   345688888889999888


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-------  158 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  158 (223)
                      + ++++++|+||||||...       ..++|++++++|+.+++.+++.+.|.|.++  |++|++||.++..+.       
T Consensus        71 ~-~~~g~id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~  140 (275)
T PRK06940         71 A-QTLGPVTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQE  140 (275)
T ss_pred             H-HhcCCCCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhh
Confidence            7 56899999999999742       236799999999999999999999999754  789999998876542       


Q ss_pred             -----------------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 -----------------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 -----------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                                             ++...|++||+|+..++++|+.|++++||+||+|+||++ |++..+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~  209 (275)
T PRK06940        141 RALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD  209 (275)
T ss_pred             ccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence                                   246789999999999999999999999999999999999 776543

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=213.97  Aligned_cols=190  Identities=21%  Similarity=0.242  Sum_probs=164.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-----CccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   79 (223)
                      +++++|++||||++++||++++++|+++|++|++++|         +....+...+++....     ..+..|+.|.+++
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~   73 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR---------NPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQV   73 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHH
Confidence            4578999999999999999999999999999999987         4444444445544321     2334688888888


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      +.+++++.++++++|++|||||... ..++.+.+.++|+.++++|+.+++.+++.+++.+.+.+.++|+++||..+..+.
T Consensus        74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~  153 (276)
T PRK05875         74 ARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH  153 (276)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence            9999999999999999999999753 356777889999999999999999999999999988777899999999998888


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|+++|++++.++++++.++.+++|++++|.||++ |++...
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        154 RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence            889999999999999999999999999999999999999 666544

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=6.5e-32  Score=212.82  Aligned_cols=189  Identities=39%  Similarity=0.609  Sum_probs=158.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH----HhCCccccccCC-ccchH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SKGGKAVPNYNS-VVDGD   80 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~   80 (223)
                      .+++|++|||||++|||+++|+.|+++|++|+++.+.....       ..+...+...    ........|+++ ..+++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~   74 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE-------AAEALAAAIKEAGGGRAAAVAADVSDDEESVE   74 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh-------hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHH
Confidence            46789999999999999999999999999988887632210       2233333333    122223468887 88889


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      .+++.+.+.+|++|++|||||.... .++.+.+.++|++++++|+.+++.+++.+.|.++++   +||++||..+. +.+
T Consensus        75 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~  150 (251)
T COG1028          75 ALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGP  150 (251)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCC
Confidence            9999999999999999999999877 488999999999999999999999999888888833   99999999999 877


Q ss_pred             CC-chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        160 GQ-ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       160 ~~-~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +. .+|++||+|+.+|+++++.|++++||++++|+||++ |++.....
T Consensus       151 ~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~  198 (251)
T COG1028         151 PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALE  198 (251)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhh
Confidence            74 999999999999999999999999999999999988 77666443

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=210.76  Aligned_cols=188  Identities=33%  Similarity=0.470  Sum_probs=159.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   81 (223)
                      +.+++|++|||||+++||++++++|+++|++|++++|         +....+...+++....   ..+..|++|..+++.
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADI---------NAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKA   72 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            3578899999999999999999999999999999987         4444444445554332   245678888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR---DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      +++.+.++++++|+||||||...   ..++.+.+.++|++++++|+.+++.+++.++|.+.+.+.++||++||..+..  
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--  150 (250)
T PRK07774         73 MADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--  150 (250)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--
Confidence            99999999999999999999764   3456778899999999999999999999999999887778999999987654  


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                       +...|+++|++++.++++++.++.+.||++++++||.+ +++....
T Consensus       151 -~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  196 (250)
T PRK07774        151 -YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV  196 (250)
T ss_pred             -CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc
Confidence             45789999999999999999999999999999999999 7665543

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-31  Score=210.32  Aligned_cols=186  Identities=26%  Similarity=0.293  Sum_probs=158.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ....+|++|||||++|||++++++|+++|++|+++++.        +....+...+++...+.   .+.+|++|..++++
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   76 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNR--------SRDEAEALAAEIRALGRRAVALQADLADEAEVRA   76 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            34578999999999999999999999999999887652        23334444455543333   34568888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+.+++.+...++||+++|..+..+.|+.
T Consensus        77 ~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~  156 (258)
T PRK09134         77 LVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDF  156 (258)
T ss_pred             HHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCc
Confidence            99999888999999999999877777888899999999999999999999999999987767899999998777778888


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      ..|+++|+++++++++++.++.+. |+|++|+||++ +.
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~  194 (258)
T PRK09134        157 LSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPS  194 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCC
Confidence            899999999999999999999875 99999999998 53

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.4e-31  Score=210.69  Aligned_cols=188  Identities=34%  Similarity=0.527  Sum_probs=165.2

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||+++||++++++|+++|++|++++|         +.....+..+++...+   ..+..|+.|.+++++++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   71 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL---------NREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAV   71 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999999999987         5555555555554432   23466888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+.+.++++|++|||+|.....++.+.+.++|++++++|+.+++.+.+.+.+.|.+.+.++||++||..+..+.++...
T Consensus        72 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~  151 (250)
T TIGR03206        72 AAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAV  151 (250)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCch
Confidence            99999999999999999987667778889999999999999999999999999998877789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++|++++.++++++.++.+.||+++.|+||.+ +++..+
T Consensus       152 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~  192 (250)
T TIGR03206       152 YAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDD  192 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHh
Confidence            9999999999999999999989999999999999 665544

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.2e-31  Score=209.93  Aligned_cols=184  Identities=33%  Similarity=0.536  Sum_probs=158.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHHHHH
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +|||||++|||+++|++|+++|++|++++|.        +....+...++++..+.   .+..|+.|.++++.+++++.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHS--------GRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIA   72 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999998762        33444455555554433   345688888888899999888


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH-HHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAW-PHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      .++++|++|||+|.....++.+.+.++|+.++++|+.+++.+.+.++ |.+++.+.++||++||..+..+.++...|+++
T Consensus        73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  152 (239)
T TIGR01831        73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAA  152 (239)
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHH
Confidence            99999999999998877777888999999999999999999999875 55555566899999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++++++++++.|+.++||++++|+||++ |++..+
T Consensus       153 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  189 (239)
T TIGR01831       153 KAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE  189 (239)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh
Confidence            999999999999999999999999999999 776654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-31  Score=210.95  Aligned_cols=184  Identities=25%  Similarity=0.449  Sum_probs=160.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCccchHHHHHHH
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++||||++|||++++++|+++|++|++++|+.        ....+.+.+++.....     .+..|+.|.++++.+++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIND--------AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA   73 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--------chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence            79999999999999999999999999998721        3334444445543321     2456889999999999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|++
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~  153 (251)
T PRK07069         74 ADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNA  153 (251)
T ss_pred             HHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHH
Confidence            99999999999999988777888889999999999999999999999999999877799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCC--eEEEEEeCCCc-cccccc
Q psy16220        167 AKMALVGLSNTLSIEGEKNN--IHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v-t~~~~~  203 (223)
                      +|++++.++++|+.|+++++  |+|++|+||++ |++...
T Consensus       154 sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~  193 (251)
T PRK07069        154 SKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP  193 (251)
T ss_pred             HHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence            99999999999999998764  99999999999 776543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.1e-31  Score=213.62  Aligned_cols=180  Identities=23%  Similarity=0.273  Sum_probs=146.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C---CccccccCCccch----HH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G---GKAVPNYNSVVDG----DK   81 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~----~~   81 (223)
                      ++++||||++|||++++++|+++|++|++++|.        +....+.+.+++... +   ..+.+|++|.+++    +.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~   73 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR--------SAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEA   73 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC--------cHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHH
Confidence            589999999999999999999999999998652        334444555555432 1   1345688888755    45


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHHHhc------CCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISD-----------TDWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYG  144 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g  144 (223)
                      +++.+.+.++++|+||||||.....++.+.+.           ++|++++++|+.+++.+++.++|+|...      ..+
T Consensus        74 ~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~  153 (267)
T TIGR02685        74 IIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNL  153 (267)
T ss_pred             HHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCe
Confidence            56666677899999999999765555443333           3589999999999999999999998643      236


Q ss_pred             cEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        145 RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       145 ~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +|++++|..+..+.++..+|++||+++++++++|+.|+++.||+|++|+||++
T Consensus       154 ~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~  206 (267)
T TIGR02685       154 SIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLS  206 (267)
T ss_pred             EEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCc
Confidence            89999999998889999999999999999999999999999999999999998

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.5e-31  Score=235.99  Aligned_cols=188  Identities=35%  Similarity=0.488  Sum_probs=166.7

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-----CccccccCC
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-----GKAVPNYNS   75 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~   75 (223)
                      ||....+++|++|||||++|||+++|++|+++|++|++++|         +....+...+++....     ..+.+|++|
T Consensus       406 ~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r---------~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd  476 (676)
T TIGR02632       406 MPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL---------NLEAAEAVAAEINGQFGAGRAVALKMDVTD  476 (676)
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHHHHhhcCCCcEEEEECCCCC
Confidence            56666788999999999999999999999999999999987         5555555555554321     135679999


Q ss_pred             ccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcc
Q psy16220         76 VVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSG  154 (223)
Q Consensus        76 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~  154 (223)
                      ..+++.+++++.+.++++|+||||||.....++.+.+.++|+..+++|+.+++.+++.+++.|+..+ .++||++||..+
T Consensus       477 ~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a  556 (676)
T TIGR02632       477 EQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA  556 (676)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh
Confidence            9999999999999999999999999987767788889999999999999999999999999998764 479999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..+.++..+|+++|+++++++++++.|+++.||+||+|+||.|
T Consensus       557 ~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V  599 (676)
T TIGR02632       557 VYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAV  599 (676)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCce
Confidence            9999999999999999999999999999999999999999998

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-31  Score=207.89  Aligned_cols=182  Identities=23%  Similarity=0.319  Sum_probs=145.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .+++|++|||||++|||+++|++|+++|++|+++++.        +.+..+++.+++.  ...+..|..|..++.+    
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~--------~~~~~~~l~~~~~--~~~~~~D~~~~~~~~~----   68 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG--------SKDAAERLAQETG--ATAVQTDSADRDAVID----   68 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC--------CHHHHHHHHHHhC--CeEEecCCCCHHHHHH----
Confidence            5779999999999999999999999999999887652        2233333322221  1223345555443333    


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~y  164 (223)
                      ..++++++|++|||||.....+..+.+.++|++++++|+.+++.+++.+++.|.+.  ++||++||..+. .+.++...|
T Consensus        69 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~~Y  146 (237)
T PRK12742         69 VVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG--GRIIIIGSVNGDRMPVAGMAAY  146 (237)
T ss_pred             HHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC--CeEEEEeccccccCCCCCCcch
Confidence            33456899999999998766677788899999999999999999999999998643  899999998874 577889999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++.++++++.+++++||+||+|+||++ |++...
T Consensus       147 ~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        147 AASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPA  186 (237)
T ss_pred             HHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccc
Confidence            999999999999999999999999999999999 776543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.6e-31  Score=217.20  Aligned_cols=186  Identities=19%  Similarity=0.190  Sum_probs=152.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   83 (223)
                      .+|++|||||++|||+++|++|+++| ++|++++|         +....++..+++...+.   .+.+|+.|.++++.++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACR---------DFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHH
Confidence            37899999999999999999999999 99999987         55555555555543222   2356888999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCccccc---
Q psy16220         84 QTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLG---  157 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~---  157 (223)
                      +++.+.++++|+||||||.... .+..+.+.++|+.++++|+.+++.+++.++|+|++.+  .++||++||.++..+   
T Consensus        73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~  152 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLA  152 (314)
T ss_pred             HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCC
Confidence            9998888999999999997543 2345678899999999999999999999999998763  489999999876421   


Q ss_pred             ------------------------------CCCCchhhhhHHHHHHHHHHHHhhhC-CCCeEEEEEeCCCc--ccccc
Q psy16220        158 ------------------------------NFGQANYSAAKMALVGLSNTLSIEGE-KNNIHCNVIVPTAA--SRLTE  202 (223)
Q Consensus       158 ------------------------------~~~~~~y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v--t~~~~  202 (223)
                                                    ..+...|++||+++..+++.|+.++. ++||+|++|+||.|  |++..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~  230 (314)
T TIGR01289       153 GNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFR  230 (314)
T ss_pred             CcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccc
Confidence                                          12456799999999999999999985 46999999999998  45543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=2.3e-31  Score=210.23  Aligned_cols=184  Identities=23%  Similarity=0.321  Sum_probs=155.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C---C-ccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G---G-KAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~~~~~   81 (223)
                      +++|++|||||++|||+++|++|+++|++|++++|         +....++..+++... +   . .+.+|+.|.+++.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~   72 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADI---------DKEALNELLESLGKEFKSKKLSLVELDITDQESLEE   72 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec---------ChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHH
Confidence            46899999999999999999999999999999987         555555555555322 1   1 23679999888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR---DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      +++.+.+.++++|+|||||+...   ..++.+.+.++|+.++++|+.+++.+++.++|.|++.+.++||++||..+..+.
T Consensus        73 ~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  152 (256)
T PRK09186         73 FLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAP  152 (256)
T ss_pred             HHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccc
Confidence            99999899999999999997542   246778899999999999999999999999999998777899999998765432


Q ss_pred             C----------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        159 F----------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       159 ~----------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      .          ....|+++|+++++++++++.|+.++||+|++|+||.+ ++
T Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~  204 (256)
T PRK09186        153 KFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDN  204 (256)
T ss_pred             cchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCC
Confidence            1          23479999999999999999999999999999999988 54

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=207.42  Aligned_cols=170  Identities=16%  Similarity=0.158  Sum_probs=138.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      +++||||++|||+++++.|+++|++|++++|         +.++.++..+++.  ...+.+|+.|..+++++++.+.   
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~---   67 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA---------RRDDLEVAAKELD--VDAIVCDNTDPASLEEARGLFP---   67 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhcc--CcEEecCCCCHHHHHHHHHHHh---
Confidence            5899999999999999999999999999987         5555544444331  2345678888887777776654   


Q ss_pred             CCccEEEeccCCCCC------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         91 GRIDIVINNAGILRD------KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        91 ~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +++|+||||||....      .++.+ +.++|++++++|+.+++.+++.++|+|++.  |+||++||..    .++...|
T Consensus        68 ~~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--g~Iv~isS~~----~~~~~~Y  140 (223)
T PRK05884         68 HHLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSG--GSIISVVPEN----PPAGSAE  140 (223)
T ss_pred             hcCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CeEEEEecCC----CCCcccc
Confidence            269999999985321      12333 468999999999999999999999999753  8999999976    3566889


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      +++|+|+.+|+++|+.|++++||+||+|+||++ |++.
T Consensus       141 ~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~  178 (223)
T PRK05884        141 AAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY  178 (223)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh
Confidence            999999999999999999999999999999999 6654

>KOG1208|consensus

Probab=100.00  E-value=1.6e-31  Score=214.28  Aligned_cols=188  Identities=25%  Similarity=0.314  Sum_probs=160.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--c---cccccCCccc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--K---AVPNYNSVVD   78 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~   78 (223)
                      ..++.+++++|||+++|||+++|++|+++|++|++.+|         +.+..++..+.+.....  .   ..+|++|..+
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R---------~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~S  100 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACR---------NEERGEEAKEQIQKGKANQKIRVIQLDLSSLKS  100 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCceEEEECCCCCHHH
Confidence            45678999999999999999999999999999999988         77777777777765222  2   4569999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-  157 (223)
                      +.++.+.+.+.++++|+||||||++....  ..+.|.++..+++|++|++.|++.++|.|+....+|||++||..+... 
T Consensus       101 V~~fa~~~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~  178 (314)
T KOG1208|consen  101 VRKFAEEFKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKI  178 (314)
T ss_pred             HHHHHHHHHhcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCcc
Confidence            99999999999999999999999987543  677889999999999999999999999999887799999999876110 


Q ss_pred             ------------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        158 ------------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                                  .....+|+.||.++..+++.|++.+.+ ||.+++++||.| ++...+
T Consensus       179 ~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  179 DLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             chhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence                        223345999999999999999999987 999999999999 663444

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.4e-31  Score=207.21  Aligned_cols=191  Identities=29%  Similarity=0.452  Sum_probs=162.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccC--Cccch
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYN--SVVDG   79 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~   79 (223)
                      .+++|++|||||+++||.+++++|+++|++|++++|         +....+...+++...+.    .+..|+.  +..+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~   79 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGR---------TEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNY   79 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeC---------CHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHH
Confidence            468999999999999999999999999999999987         55555555566654332    1233443  56677


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ..+++.+.+.++++|+||||||.... .++.+.+.+.|++.+++|+.+++.+++.++++|.+.+.++||++||..+..+.
T Consensus        80 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~  159 (247)
T PRK08945         80 QQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR  159 (247)
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC
Confidence            88888998889999999999997543 56778889999999999999999999999999998878999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ++..+|+++|++++.++++++.++...||++++++||.+ +++.....
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~  207 (247)
T PRK08945        160 ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF  207 (247)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc
Confidence            999999999999999999999999999999999999999 66544333

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-31  Score=206.83  Aligned_cols=193  Identities=38%  Similarity=0.617  Sum_probs=165.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .++++++|||||+++||+++|++|+++|++|++++|...+     +....+...+++...+.   .+..|+.|..+++..
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMR-----GRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAA   77 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccc-----cHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            4678999999999999999999999999999998764322     44455555555554333   345688888888899


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH-HHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAW-PHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++.+.+.++++|++|||||.....++.+.+.++|+.++++|+.+++.+++.+. +.+++.+.+++|++||..+..+.++.
T Consensus        78 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  157 (249)
T PRK12827         78 LDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQ  157 (249)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCC
Confidence            99998888999999999998877788888999999999999999999999999 66666666899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+.+|++++.++++++.++++.||++++|+||++ |++..+
T Consensus       158 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        158 VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN  200 (249)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence            999999999999999999999999999999999999 665544

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-31  Score=208.45  Aligned_cols=186  Identities=29%  Similarity=0.369  Sum_probs=162.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .+++|+++||||+++||+.++++|+++|++ |++++|         +........+++...+..   +.+|+.+.+++++
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   73 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGR---------NAEKGEAQAAELEALGAKAVFVQADLSDVEDCRR   73 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcC---------CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            468899999999999999999999999999 999887         444444444455443332   4568888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~  160 (223)
                      +++.+.++++++|++|||+|.....++.+.+.++|+.++++|+.+++.+++.+++.+.+.+ .+++|++||..+..+.++
T Consensus        74 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~  153 (260)
T PRK06198         74 VVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF  153 (260)
T ss_pred             HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC
Confidence            9999988999999999999987767777889999999999999999999999999997653 589999999999888889


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ...|+++|+++++++++++.|+.+.+|++++|+||++ +++
T Consensus       154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~  194 (260)
T PRK06198        154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG  194 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence            9999999999999999999999999999999999999 665

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-31  Score=208.94  Aligned_cols=177  Identities=27%  Similarity=0.398  Sum_probs=148.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|+++||||++|||++++++|+++|++|++++|+....               .......+..|+.+.      +++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------------~~~~~~~~~~D~~~~------~~~   60 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------------LSGNFHFLQLDLSDD------LEP   60 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------------cCCcEEEEECChHHH------HHH
Confidence            47789999999999999999999999999999998742210               001111223344333      666


Q ss_pred             HHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.+.+.+.++||++||..+..+.++...|
T Consensus        61 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  140 (235)
T PRK06550         61 LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAY  140 (235)
T ss_pred             HHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCccc
Confidence            6677899999999999753 356778899999999999999999999999999988777999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|+++++++++++.|+.++||+|++|.||++ |++...
T Consensus       141 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~  180 (235)
T PRK06550        141 TASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA  180 (235)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc
Confidence            999999999999999999999999999999999 776543

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=3e-31  Score=215.14  Aligned_cols=181  Identities=20%  Similarity=0.215  Sum_probs=149.6

Q ss_pred             EEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHHHHH
Q psy16220         13 IVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        13 lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      |||||++|||+++|++|+++| ++|++++|         +....++..+++.....   .+.+|+.|.++++.+++++.+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   71 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACR---------DFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRR   71 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeC---------CHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence            699999999999999999999 99999987         55555555555543222   235689999999999999988


Q ss_pred             hcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCccccc--------
Q psy16220         89 NFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLG--------  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~--------  157 (223)
                      .++++|+||||||.... .+..+.+.++|++++++|+.+++.+++.++|.|.+.+  .|+||++||..+..+        
T Consensus        72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  151 (308)
T PLN00015         72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPP  151 (308)
T ss_pred             cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCC
Confidence            88999999999997643 3566789999999999999999999999999998765  589999999876421        


Q ss_pred             ---------------------------CCCCchhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-c-cccc
Q psy16220        158 ---------------------------NFGQANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-S-RLTE  202 (223)
Q Consensus       158 ---------------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t-~~~~  202 (223)
                                                 ..+..+|++||+|+..+++.++.++.+ .||+|++|+||+| + ++..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~  226 (308)
T PLN00015        152 KANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFR  226 (308)
T ss_pred             ccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccc
Confidence                                       124577999999999999999999975 6999999999998 4 4543

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.98  E-value=2.2e-31  Score=208.91  Aligned_cols=186  Identities=32%  Similarity=0.531  Sum_probs=159.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH---hCCccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      |++|||||+++||+++|++|+++|++|++++|+.        .....+.......   +...+.+|+.|.++++.+++.+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG--------NDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEI   74 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc--------HHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999999998731        1112222222221   1223456888888899999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .++++++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+++.+.+.+.++||++||..+..+.++...|++
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~  154 (245)
T PRK12824         75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSA  154 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHH
Confidence            99999999999999988777788899999999999999999999999999998877799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +|+++++++++++.++.++||++++|.||.+ +++...
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  192 (245)
T PRK12824        155 AKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ  192 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh
Confidence            9999999999999999999999999999999 665443

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.3e-31  Score=207.18  Aligned_cols=187  Identities=29%  Similarity=0.461  Sum_probs=160.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ++++++++||||+++||.++|++|+++|++|++. .|         ++...+...+.+...+.   .+..|++|.++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~   73 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGR---------NKQAADETIREIESNGGKAFLIEADLNSIDGVKK   73 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHH
Confidence            4678999999999999999999999999999875 34         55555555555543322   34568999888989


Q ss_pred             HHHHHHHhc------CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         82 IVQTALENF------GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        82 ~~~~~~~~~------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      +++++.+++      +++|++|||||.....++.+.+.+.|+.++++|+.+++.+++.+.+.+.+.  +++|++||..+.
T Consensus        74 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~  151 (254)
T PRK12746         74 LVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVR  151 (254)
T ss_pred             HHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhc
Confidence            899888876      479999999998777777888999999999999999999999999998654  799999999998


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+.++...|+++|++++.++++++.++.+.||++++|.||++ +++..+
T Consensus       152 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~  200 (254)
T PRK12746        152 LGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK  200 (254)
T ss_pred             CCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh
Confidence            899999999999999999999999999999999999999999 666544

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.2e-31  Score=206.15  Aligned_cols=186  Identities=30%  Similarity=0.457  Sum_probs=156.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||+++||.+++++|+++|++|++.++.        +........+.+...+.   .+.+|+.|..++++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   73 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLR--------NRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEA   73 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCC--------CHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHH
Confidence            4799999999999999999999999999887642        33334444445543332   356688888889999999


Q ss_pred             HHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc---CCCcEEEEecCcccccCCCC
Q psy16220         86 ALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ---NYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +.++++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.+++.|.++   +.|+||++||..+..+.++.
T Consensus        74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  153 (248)
T PRK06123         74 VDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE  153 (248)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC
Confidence            99999999999999998653 467788999999999999999999999999998754   24789999999988888764


Q ss_pred             -chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 -ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 -~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                       ..|+++|+++++++++++.|+.++||+|++|+||.+ +++..
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        154 YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence             679999999999999999999999999999999999 66543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.4e-31  Score=206.77  Aligned_cols=187  Identities=27%  Similarity=0.345  Sum_probs=156.1

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      ||+++++++++++|||++++||+++++.|+++|++|++++|         +.+..++..+...  ...+..|..+..+++
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~--~~~~~~D~~~~~~v~   69 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAAR---------NAAALDRLAGETG--CEPLRLDVGDDAAIR   69 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhC--CeEEEecCCCHHHHH
Confidence            89888999999999999999999999999999999999987         4444433332221  123345666655444


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~  159 (223)
                      ..++    .++++|++|||||.....+..+.+.++|++++++|+.+++.+++.+.+.+.+.+ .++||++||..+..+.+
T Consensus        70 ~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  145 (245)
T PRK07060         70 AALA----AAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP  145 (245)
T ss_pred             HHHH----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC
Confidence            4443    367899999999987766777788999999999999999999999999987654 47999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +...|+++|++++.++++++.++.+.||++++|.||.+ +++..
T Consensus       146 ~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~  189 (245)
T PRK07060        146 DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA  189 (245)
T ss_pred             CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence            99999999999999999999999999999999999999 66543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=1.2e-30  Score=205.66  Aligned_cols=189  Identities=32%  Similarity=0.480  Sum_probs=158.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      +++++++||||+++|||++++++|+++|++|++++|         +..+.+...+++...+.   .+.+|+++.++++++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL---------NQEKLEEAVAECGALGTEVRGYAANVTDEEDVEAT   72 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            477999999999999999999999999999999987         55555555555554333   246688888888888


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCC---------CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSF---------ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASN  152 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~  152 (223)
                      ++.+.+.++++|++|||||.......         .+.+.++|+.++++|+.+++.+.+.+++.+.+. ..++||++||.
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~  152 (253)
T PRK08217         73 FAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI  152 (253)
T ss_pred             HHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence            99888888999999999997543221         567889999999999999999999999999765 45789999886


Q ss_pred             cccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        153 SGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       153 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                       +..+.++...|+++|+++++++++|+.++.++||++++++||.+ +++....
T Consensus       153 -~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~  204 (253)
T PRK08217        153 -ARAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM  204 (253)
T ss_pred             -cccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc
Confidence             45677889999999999999999999999999999999999999 6665443

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.3e-31  Score=206.67  Aligned_cols=177  Identities=28%  Similarity=0.387  Sum_probs=154.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+|++|||||+++||++++++|+++|++|++++|+....               .  ....+..|+.|..+++..++++.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------------~--~~~~~~~D~~~~~~~~~~~~~~~   64 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------------F--PGELFACDLADIEQTAATLAQIN   64 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------------c--CceEEEeeCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999998843210               0  01245678889888888898887


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      +.+ ++|++|||+|.....++.+.+.++|++++++|+.+++.+.+.++|.|++.+.++||++||.. ..+.++...|+++
T Consensus        65 ~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~s  142 (234)
T PRK07577         65 EIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAA  142 (234)
T ss_pred             HhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHH
Confidence            776 68999999998877778888999999999999999999999999999988779999999985 4577888999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++++++++++.|++++||++++|+||++ |++...
T Consensus       143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence            999999999999999999999999999999 776543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=1.4e-30  Score=204.57  Aligned_cols=189  Identities=37%  Similarity=0.573  Sum_probs=164.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ++.+|++|||||+++||++++++|+++|++|+++ +|         +....+...+.+...+.   .+..|++|..++++
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI---------NEEAAQELLEEIKEEGGDAIAVKADVSSEEDVEN   72 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            4678999999999999999999999999999998 76         44555555555544332   24568888888889


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++.+.++++++|++||++|.....++.+.+.++++.++++|+.+++.+++.+.+.+.+.+.+++|++||..+..+.+..
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~  152 (247)
T PRK05565         73 LVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE  152 (247)
T ss_pred             HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCc
Confidence            99999888999999999999876667788899999999999999999999999999988877899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+.+|++++.++++++.++.++||++++|+||.+ +++...
T Consensus       153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~  195 (247)
T PRK05565        153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS  195 (247)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence            999999999999999999999989999999999999 655543

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.98  E-value=1.4e-30  Score=204.94  Aligned_cols=185  Identities=26%  Similarity=0.380  Sum_probs=155.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   86 (223)
                      |++|||||++|||.++|++|+++|++|++++++        +....+....++...+   ..+.+|+.|..+++.+++++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYAR--------DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAV   74 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHH
Confidence            689999999999999999999999999876531        4444444455554332   24556888888889999999


Q ss_pred             HHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCcEEEEecCcccccCCC-C
Q psy16220         87 LENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN---YGRLVMTASNSGLLGNFG-Q  161 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-~  161 (223)
                      .+.++++|+||||||.... .++.+.+.++|+.++++|+.+++.+++.+++.+..++   .++||++||..+..+.++ .
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~  154 (248)
T PRK06947         75 QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEY  154 (248)
T ss_pred             HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCC
Confidence            8889999999999997644 4677889999999999999999999999999987543   478999999988887765 5


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|+++|+++++++++|+.++.+.||+|+.|.||++ |++..
T Consensus       155 ~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  196 (248)
T PRK06947        155 VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA  196 (248)
T ss_pred             cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence            689999999999999999999999999999999999 77643

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=6e-31  Score=207.32  Aligned_cols=187  Identities=26%  Similarity=0.434  Sum_probs=159.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      ++++++++|||||+++||++++++|+++|+++++..|.        +..........+.+.+.   .+.+|+.+..+++.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   73 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKK--------RAEEMNETLKMVKENGGEGIGVLADVSTREGCET   73 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC--------ChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHH
Confidence            45778999999999999999999999999999887652        22233333344443322   34568888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|+||||||.....++.+.+.+.++..+++|+.+++.+++.+.|.+++.  ++||++||..+..+.++.
T Consensus        74 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~  151 (252)
T PRK06077         74 LAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGL  151 (252)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCc
Confidence            999999999999999999998777777788899999999999999999999999998764  799999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|+++|+++++++++++.|+.+ +|+++.|.||++ +++..
T Consensus       152 ~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~  192 (252)
T PRK06077        152 SIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGE  192 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHH
Confidence            99999999999999999999988 999999999999 66543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6e-31  Score=233.24  Aligned_cols=188  Identities=29%  Similarity=0.402  Sum_probs=164.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.   .+.+|+.|.++++.+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  438 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVAR---------NGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHT  438 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            467899999999999999999999999999999987         66666666666654433   345688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARI--SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++.+.++++|++|||||......+.+.  ..++++.++++|+.+++.+++.++|.|++.+.|+||++||.++..+.++
T Consensus       439 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  518 (657)
T PRK07201        439 VKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR  518 (657)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC
Confidence            99999999999999999997654443332  2578999999999999999999999999887899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|+++|+++++|+++++.|++++||+|++|+||+| |++..
T Consensus       519 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~  561 (657)
T PRK07201        519 FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA  561 (657)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence            9999999999999999999999999999999999999 77654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.98  E-value=1.9e-30  Score=211.74  Aligned_cols=183  Identities=18%  Similarity=0.143  Sum_probs=150.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||++|||++++++|+++|++|++++|         +....++..+++....   ..+..|+.|..+++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~   73 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACR---------NLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRF   73 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHH
Confidence            457899999999999999999999999999999987         5555555555554222   2345688888889998


Q ss_pred             HHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC--CcEEEEecCcccc---
Q psy16220         83 VQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSGLL---  156 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~vsS~~~~~---  156 (223)
                      ++++.+.++++|+||||||.... .+..+.+.++|+.++++|+.+++.+++.++|.|++.+.  ++||++||.....   
T Consensus        74 ~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~  153 (322)
T PRK07453         74 VDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKEL  153 (322)
T ss_pred             HHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCcccc
Confidence            98887777899999999997643 23356788999999999999999999999999987653  6999999965432   


Q ss_pred             --------------------------------cCCCCchhhhhHHHHHHHHHHHHhhhC-CCCeEEEEEeCCCc
Q psy16220        157 --------------------------------GNFGQANYSAAKMALVGLSNTLSIEGE-KNNIHCNVIVPTAA  197 (223)
Q Consensus       157 --------------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v  197 (223)
                                                      +..+..+|+.||.+...+++.|+.++. +.||++++|+||.|
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  227 (322)
T PRK07453        154 GGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCV  227 (322)
T ss_pred             CCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcc
Confidence                                            012346799999999999999999985 47999999999998

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.98  E-value=5.6e-31  Score=195.15  Aligned_cols=162  Identities=34%  Similarity=0.563  Sum_probs=143.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   85 (223)
                      |++|||||++|||++++++|+++|+ +|++++|+       .+....+++.++++..+..   +.+|+++.++++.++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~-------~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS-------EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEE   73 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS-------CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec-------ccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999965 66777661       1256677777777765543   34588888889999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|++|||+|....+++.+.+.++|++++++|+.+++.+.+.+.|    ++.|+||++||..+..|.++...|+
T Consensus        74 ~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~  149 (167)
T PF00106_consen   74 VIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYS  149 (167)
T ss_dssp             HHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHH
T ss_pred             cccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHH
Confidence            999999999999999999888999999999999999999999999999999    3359999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhh
Q psy16220        166 AAKMALVGLSNTLSIEG  182 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~  182 (223)
                      ++|+|+++|+++|+.|+
T Consensus       150 askaal~~~~~~la~e~  166 (167)
T PF00106_consen  150 ASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-30  Score=205.18  Aligned_cols=186  Identities=30%  Similarity=0.517  Sum_probs=161.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|||||+++||++++++|+++|++|++++|         +....+...+++...+..   +..|+.|..+++.+++.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAAR---------NETRLASLAQELADHGGEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999987         555555555555544433   35588888888899999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCC-CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARI-SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.++++++|++|||||.....++.+. +.+++++.+++|+.+++.+++.+.+++.+.. ++||++||..+..+.++...|
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y  150 (263)
T PRK06181         72 AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGLTGVPTRSGY  150 (263)
T ss_pred             HHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CEEEEEecccccCCCCCccHH
Confidence            98889999999999998777777777 8999999999999999999999999987653 899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +++|+++++++++++.++.+.+|+++++.||.+ |++..+.
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~  191 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA  191 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh
Confidence            999999999999999999999999999999999 6665543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7.7e-31  Score=207.23  Aligned_cols=186  Identities=22%  Similarity=0.307  Sum_probs=157.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||+++||.++|++|+++|++|++++|.        .....+...+.++..+   ..+..|+++..++.+++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRP--------DDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDA   73 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecC--------chhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            3799999999999999999999999999999873        1222333344444322   2345688888889999999


Q ss_pred             HHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCcEEEEecCccccc
Q psy16220         86 ALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLG  157 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~vsS~~~~~~  157 (223)
                      +.+.++++|++|||||...  ..++.+.+.++|++++++|+.+++.+++.+.+.|.+.+      .++||++||..+..+
T Consensus        74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~  153 (256)
T PRK12745         74 AQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV  153 (256)
T ss_pred             HHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC
Confidence            9999999999999999753  34677888999999999999999999999999998654      357999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .++...|+++|++++.++++++.|+.++||++++|+||.+ +++..
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  199 (256)
T PRK12745        154 SPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA  199 (256)
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc
Confidence            9999999999999999999999999999999999999999 66544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=3e-30  Score=202.10  Aligned_cols=185  Identities=30%  Similarity=0.508  Sum_probs=160.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   86 (223)
                      |++|||||+++||+++|++|+++|++|++++|.        +....++..+++...+   ..+..|+.|..+++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGP--------NEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKV   72 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence            689999999999999999999999999998762        3333444444443322   24456888888889999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+++.+++.+.++||++||..+..+.++...|++
T Consensus        73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  152 (242)
T TIGR01829        73 EAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSA  152 (242)
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHH
Confidence            99999999999999987767778889999999999999999999999999999887789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +|++++.++++++.++.++||+++++.||++ +++..
T Consensus       153 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~  189 (242)
T TIGR01829       153 AKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM  189 (242)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc
Confidence            9999999999999999999999999999999 66554

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.2e-31  Score=199.53  Aligned_cols=159  Identities=21%  Similarity=0.281  Sum_probs=141.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||++|||+++++.|+++ ++|++++|+         ..              .+.+|+.|.++++.+++    ++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~---------~~--------------~~~~D~~~~~~~~~~~~----~~   53 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRS---------SG--------------DVQVDITDPASIRALFE----KV   53 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecC---------CC--------------ceEecCCChHHHHHHHH----hc
Confidence            6999999999999999999999 999998772         11              24668888777766655    35


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHHH
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMA  170 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~a  170 (223)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++.+.|+|.+.  |+|+++||..+..+.++...|+++|++
T Consensus        54 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~~~~~~~Y~~sK~a  131 (199)
T PRK07578         54 GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEPIPGGASAATVNGA  131 (199)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCCCCCchHHHHHHHH
Confidence            799999999998777778889999999999999999999999999999754  899999999999999999999999999


Q ss_pred             HHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        171 LVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       171 ~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      +++|+++|+.|+ ++||+||+|+||++ |++
T Consensus       132 ~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578        132 LEGFVKAAALEL-PRGIRINVVSPTVLTESL  161 (199)
T ss_pred             HHHHHHHHHHHc-cCCeEEEEEcCCcccCch
Confidence            999999999999 88999999999999 544

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=203.42  Aligned_cols=182  Identities=17%  Similarity=0.203  Sum_probs=155.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC----CccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----GKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~   85 (223)
                      |+++||||++|||++++++|+++|++|++++|         +....+...+++....    ..+.+|+.|..+.++++++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAAR---------DVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC---------CHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence            58999999999999999999999999999987         4444444444444322    2345677777777777776


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+   ++|++|||+|.....++.+.+.+++.+++++|+.+++.+++.+.|+|.+.+.++||++||..+..+.++...|+
T Consensus        73 ~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  149 (243)
T PRK07102         73 LPA---LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYG  149 (243)
T ss_pred             Hhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccH
Confidence            644   47999999998776777788999999999999999999999999999988779999999999988989999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++|+++++++++++.|+.+.||++++|+||++ |++...
T Consensus       150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~  188 (243)
T PRK07102        150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG  188 (243)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc
Confidence            99999999999999999999999999999999 765544

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-30  Score=201.91  Aligned_cols=187  Identities=27%  Similarity=0.439  Sum_probs=161.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+.+++++||||+++||++++++|+++|++|++++|         +.....+..+++..  ....+..|+.+..++...+
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~   73 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITAR---------DQKELEEAAAELNNKGNVLGLAADVRDEADVQRAV   73 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC---------CHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHH
Confidence            466899999999999999999999999999999987         55555555555543  2223456888888888999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+.+.++++|+|||++|.....++.+.+.+++++++++|+.+++.+++.+++.+. .+.++||++||..+..+.++...
T Consensus        74 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~~~~~  152 (237)
T PRK07326         74 DAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFAGGAA  152 (237)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCCCCch
Confidence            99988999999999999987767778889999999999999999999999999984 34489999999988888888999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |+++|+++.+++++++.|+++.|+++++|.||.+ +++..
T Consensus       153 y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~  192 (237)
T PRK07326        153 YNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNG  192 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccc
Confidence            9999999999999999999999999999999999 66544

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=201.22  Aligned_cols=189  Identities=24%  Similarity=0.345  Sum_probs=162.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   83 (223)
                      +.+++|++|||||+++||++++++|+++|++|++++|         +.....+..+++... ...+..|+.|..+++.++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGR---------GAAPLSQTLPGVPADALRIGGIDLVDPQAARRAV   73 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeC---------ChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHH
Confidence            4577999999999999999999999999999999988         443333333344332 223456888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+.+.++++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+++.+.+.+.++||++||..+..+.++...
T Consensus        74 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  153 (239)
T PRK12828         74 DEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGA  153 (239)
T ss_pred             HHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcch
Confidence            99999999999999999987666677788999999999999999999999999998877899999999999888889999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |+++|++++.+++.++.++.+.||+++++.||++ +++..
T Consensus       154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~  193 (239)
T PRK12828        154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNR  193 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchh
Confidence            9999999999999999999889999999999999 65443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.8e-30  Score=220.73  Aligned_cols=189  Identities=32%  Similarity=0.490  Sum_probs=162.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .++++++|||||++|||+++|++|+++|++|+++++.       ...+...+..+++.  ...+.+|++|.++++.+++.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~-------~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~  277 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP-------AAGEALAAVANRVG--GTALALDITAPDAPARIAEH  277 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-------ccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999998762       12223333332221  23456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|+||||||....+.+.+.+.++|+.++++|+.+++.+.+.+.+.+..++.++||++||..+..+.++...|+
T Consensus       278 ~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~  357 (450)
T PRK08261        278 LAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYA  357 (450)
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHH
Confidence            99999999999999998877888889999999999999999999999999976555568999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++|+++++|+++++.|++++||++|+|+||++ |++...
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~  396 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA  396 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc
Confidence            99999999999999999999999999999999 665543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-30  Score=202.81  Aligned_cols=178  Identities=20%  Similarity=0.199  Sum_probs=146.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++++||||++|||+++|++|+++|++|++++|         +....+++.+.. .....+.+|++|.++++++++++.  
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~--   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGR---------NQSVLDELHTQS-ANIFTLAFDVTDHPGTKAALSQLP--   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC---------CHHHHHHHHHhc-CCCeEEEeeCCCHHHHHHHHHhcc--
Confidence            68999999999999999999999999999987         444443332221 122334568887777777766553  


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                       ..+|.+|||||.....+..+.+.++|++++++|+.+++++++.+.|+|.+.  ++||++||..+..+.++...|+++|+
T Consensus        70 -~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asK~  146 (240)
T PRK06101         70 -FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCG--HRVVIVGSIASELALPRAEAYGASKA  146 (240)
T ss_pred             -cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CeEEEEechhhccCCCCCchhhHHHH
Confidence             257999999986544445567889999999999999999999999998653  68999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++++++++++.|+.++||++++|.||.+ |++..
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~  180 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD  180 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence            9999999999999999999999999999 76544

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=4.7e-30  Score=201.41  Aligned_cols=190  Identities=38%  Similarity=0.623  Sum_probs=162.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      .+++|++||||++++||++++++|+++|++|+++.|+        .....+...+++...+.   .+..|+.+..++.++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS--------SEAGAEALVAEIGALGGKALAVQGDVSDAESVERA   73 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC--------chhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4678999999999999999999999999999888762        22223334444443322   334588888888899


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|++||+||.....+..+.+.+.+++++++|+.+++.+.+.+.+.+.+.+.+++|++||..+..+.++..
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~  153 (248)
T PRK05557         74 VDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQA  153 (248)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCc
Confidence            99998889999999999998777777788999999999999999999999999999887778999999998888999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|+++|++++.++++++.++.+.+|++++++||++ +++...
T Consensus       154 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~  195 (248)
T PRK05557        154 NYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA  195 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence            99999999999999999999989999999999999 555443

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=1.3e-29  Score=199.42  Aligned_cols=187  Identities=36%  Similarity=0.611  Sum_probs=163.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||+++||++++++|+++|++|++++|         +........+.+...+.   .+..|+.|.+++++++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~   74 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDI---------CGDDAAATAELVEAAGGKARARQVDVRDRAALKAAV   74 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            56899999999999999999999999999999987         54455555555554433   2356888888889999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~  162 (223)
                      +++.++++++|++||++|.....++.+.+.+++++.+++|+.+++.+.+.++|.+.+.+.++||++||..+. .+.++..
T Consensus        75 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~  154 (251)
T PRK12826         75 AAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLA  154 (251)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCcc
Confidence            999999999999999999887777778899999999999999999999999999988777899999999888 7888899


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .|+++|+++++++++++.++.+.|++++.|.||.+ ++...
T Consensus       155 ~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~  195 (251)
T PRK12826        155 HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAG  195 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhh
Confidence            99999999999999999999989999999999999 65543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7.9e-30  Score=200.18  Aligned_cols=191  Identities=42%  Similarity=0.630  Sum_probs=163.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---CccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   82 (223)
                      .++.|++|||||+++||++++++|+++|++|++..|.        +....+...+.+...+   ..+.+|+.|..+++++
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   74 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRS--------DEEAAEELVEAVEALGRRAQAVQADVTDKAALEAA   74 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC--------CHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHH
Confidence            3556899999999999999999999999998886652        3333444444444333   2345688888888898


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.++++++|++||+||.....++.+.+.++++.++++|+.+++.+.+.+++++.+.+.+++|++||..+..+.++..
T Consensus        75 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~  154 (249)
T PRK12825         75 VAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRS  154 (249)
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCch
Confidence            99888888999999999998777777888999999999999999999999999999887778999999999998888999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|+.+|++++++++.++.++.+.||++++++||.+ +++....
T Consensus       155 ~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~  197 (249)
T PRK12825        155 NYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT  197 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc
Confidence            99999999999999999999989999999999999 7665543

>KOG1611|consensus

Probab=99.97  E-value=6.3e-30  Score=190.07  Aligned_cols=186  Identities=22%  Similarity=0.269  Sum_probs=151.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHH---HHhCCccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEI---RSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      |.++||||.+|||+.++++|.+. |-.+++..+        |+.+...+..+..   ..+...+..|++.++++.+++++
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~--------r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~   75 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATA--------RDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQE   75 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEec--------CChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHH
Confidence            46999999999999999999854 777666544        2343322222221   23445567799999999999999


Q ss_pred             HHHh--cCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-----------CcEEEEec
Q psy16220         86 ALEN--FGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-----------GRLVMTAS  151 (223)
Q Consensus        86 ~~~~--~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----------g~iv~vsS  151 (223)
                      +.+-  ...+|+||+|||+... ....+.+.+.|.+.+++|..++..++|.++|++++...           ..|||+||
T Consensus        76 V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS  155 (249)
T KOG1611|consen   76 VEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISS  155 (249)
T ss_pred             HHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeec
Confidence            9886  4589999999998754 45667788999999999999999999999999997642           37999999


Q ss_pred             CcccccC---CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        152 NSGLLGN---FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       152 ~~~~~~~---~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++..+.   .+..+|.+||+|++.|+|+++.|+.+.+|.|.+++||+| |+|...
T Consensus       156 ~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~  211 (249)
T KOG1611|consen  156 SAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK  211 (249)
T ss_pred             cccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC
Confidence            7776543   467899999999999999999999999999999999999 888773

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=200.74  Aligned_cols=184  Identities=24%  Similarity=0.363  Sum_probs=157.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +|++|||||+++||+++|++|+++|++|++++|         +....+...+++... ...+..|+.|.+++...++++.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDI---------DAAALAAFADALGDARFVPVACDLTDAASLAAALANAA   72 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999987         444444444444221 2234678888888888999998


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      ++++++|++||++|.....++.+.+.++|+..+++|+.+++.+.+.+++.+.+.+.++||++||..+.. ..+...|+.+
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~s  151 (257)
T PRK07074         73 AERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAA  151 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHH
Confidence            899999999999998776677788999999999999999999999999999887778999999976653 3467789999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |++++.++++++.|++++||+|++++||++ +++..
T Consensus       152 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        152 KAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE  187 (257)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence            999999999999999999999999999999 66543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.3e-29  Score=224.65  Aligned_cols=184  Identities=34%  Similarity=0.456  Sum_probs=164.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   82 (223)
                      -.+.||++|||||++|||+++|++|+++|++|++++|         +....+...+++..  ....+.+|++|..+++.+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r---------~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~  488 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADL---------DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAA  488 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeC---------CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHH
Confidence            3467899999999999999999999999999999987         55555555555543  222456688898889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|++|||||.....++.+.+.++|+.++++|+.+++.+++.+.+.+++.+. |+||++||..+..+.++.
T Consensus       489 ~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~  568 (681)
T PRK08324        489 FEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNF  568 (681)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCc
Confidence            9999899999999999999988888889999999999999999999999999999988664 899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..|+++|++++.++++++.|+++.||+||+|+||.+
T Consensus       569 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v  604 (681)
T PRK08324        569 GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAV  604 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCcee
Confidence            999999999999999999999999999999999998

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.6e-30  Score=201.81  Aligned_cols=185  Identities=19%  Similarity=0.259  Sum_probs=151.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||+++|++|+++|++|++++|+..        ...+...+........+.+|++|.++++++++++.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN--------KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSS   73 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch--------HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999987321        2222222222122234567899988899999988777


Q ss_pred             cCC--cc--EEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccccCCCCch
Q psy16220         90 FGR--ID--IVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        90 ~~~--id--~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++.  ++  ++|+|||.... .++.+.+.++|.+.+++|+.+++.+++.++|++++. ..++||++||..+..+.++...
T Consensus        74 ~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  153 (251)
T PRK06924         74 IQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSA  153 (251)
T ss_pred             cCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHH
Confidence            653  22  79999997543 567889999999999999999999999999999874 3579999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |+++|++++.+++.|+.|++  +.+|+|++|.||++ |++..
T Consensus       154 Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  195 (251)
T PRK06924        154 YCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA  195 (251)
T ss_pred             HhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence            99999999999999999975  56999999999999 76644

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-29  Score=199.38  Aligned_cols=179  Identities=22%  Similarity=0.342  Sum_probs=149.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||++|||++++++|+++|++|++++|         +....+++.+.....+..+   ..|+.|..++...++ 
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ---------IAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-
Confidence            478999999999999999999999999999987         4444444444444333333   335555444333221 


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                           +++|+||||||.....++.+.+.++++..+++|+.+++.+.+.+++.+.+.+.++||++||..+..+.++...|+
T Consensus        72 -----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~  146 (257)
T PRK09291         72 -----WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYC  146 (257)
T ss_pred             -----CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhH
Confidence                 489999999998877888899999999999999999999999999999887779999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++|++++.++++++.++.+.||++++|+||++ |++..
T Consensus       147 ~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        147 ASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            99999999999999999999999999999999 66543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=200.61  Aligned_cols=190  Identities=33%  Similarity=0.503  Sum_probs=162.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++++|||||+++||++++++|+++|++|++++|         +....+...+..... ...+..|+.|..+++.+++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV---------SEAALAATAARLPGAKVTATVADVADPAQVERVFD   78 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHH
Confidence            367899999999999999999999999999999987         444444433333221 1235668888888999999


Q ss_pred             HHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccCCCCc
Q psy16220         85 TALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++.+.++++|+|||++|.. ...+....+.++|++++++|+.+++.+++.+++.+...+. ++|+++||..+..+.++..
T Consensus        79 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~  158 (264)
T PRK12829         79 TAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRT  158 (264)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCc
Confidence            9999999999999999987 4456678899999999999999999999999999887665 7899999988888889999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|+.+|++++.++++++.++.++++++++|.||++ +++....
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~  201 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV  201 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH
Confidence            99999999999999999999888999999999999 6665443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=4.3e-29  Score=195.76  Aligned_cols=188  Identities=44%  Similarity=0.699  Sum_probs=163.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      ++.+|++|||||+++||++++++|+++|++|++++|         +....+....++...+.   .+.+|+.|..++.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDS---------NEEAAEALAAELRAAGGEARVLVFDVSDEAAVRAL   72 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------ChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            456789999999999999999999999999999987         44455555555554333   334688888888888


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|++||++|.....+..+.+.++++..++.|+.+++.+++.+.+++.+.+.++||++||..+..+.++..
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~  152 (246)
T PRK05653         73 IEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQT  152 (246)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCc
Confidence            99888888999999999998777777888999999999999999999999999999887778999999998888888899


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .|+.+|++++.++++++.++.+.|+++++|.||.+ ++...
T Consensus       153 ~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        153 NYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             HhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence            99999999999999999999989999999999999 65543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-29  Score=195.84  Aligned_cols=180  Identities=22%  Similarity=0.235  Sum_probs=145.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |+++||||++|||++++++|+++|++|++++|+..         ..+.. +++. ......+|+.|.++++++++.+.+ 
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~---------~~~~~-~~~~-~~~~~~~D~~d~~~~~~~~~~~~~-   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ---------QDTAL-QALP-GVHIEKLDMNDPASLDQLLQRLQG-   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCc---------chHHH-Hhcc-ccceEEcCCCCHHHHHHHHHHhhc-
Confidence            58999999999999999999999999999988422         22211 1111 223345688887778887777643 


Q ss_pred             cCCccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC---CCCchh
Q psy16220         90 FGRIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN---FGQANY  164 (223)
Q Consensus        90 ~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~---~~~~~y  164 (223)
                       +++|+||||||....  .++.+.+.++++..+++|+.+++.+++.+++++++. .++++++||..+..+.   .+...|
T Consensus        70 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y  147 (225)
T PRK08177         70 -QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLY  147 (225)
T ss_pred             -CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccch
Confidence             489999999998643  456788899999999999999999999999998754 3789999997765543   356789


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++.++++++.|++++||+||+|+||++ |++...
T Consensus       148 ~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        148 KASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            999999999999999999999999999999999 776543

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=199.17  Aligned_cols=180  Identities=17%  Similarity=0.223  Sum_probs=149.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH-HHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT-ALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   89 (223)
                      ++|||||++|||+++|++|+++|++|++++|+..         .  ........+...+.+|+.|.+++++++++ +.+.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~---------~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   71 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH---------P--SLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAA   71 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc---------h--hhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999987321         1  01111111223356788888888887766 5554


Q ss_pred             c---CCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         90 F---GRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        90 ~---~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +   +++|++|||||.... .++.+.+.++|++.+++|+.+++.+.+.+.+.+.+.+.++||++||..+..+.++...|+
T Consensus        72 ~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  151 (243)
T PRK07023         72 FVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYC  151 (243)
T ss_pred             hccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHH
Confidence            4   479999999997654 567788999999999999999999999999999877778999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++|++++++++.++.+ .+.||++++|+||++ |++..
T Consensus       152 ~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        152 ATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             HHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence            9999999999999999 788999999999999 66543

>KOG1210|consensus

Probab=99.97  E-value=3.6e-29  Score=194.65  Aligned_cols=186  Identities=27%  Similarity=0.340  Sum_probs=167.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CC---ccccccCCccchHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GG---KAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~   84 (223)
                      ++++|||+++|||+++|..+..+|++|.++.|         +..++.+...+++-.  ..   ....|+.|.++++..++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar---------~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~  104 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITAR---------SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIE  104 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEec---------cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHh
Confidence            69999999999999999999999999999987         777777777766532  22   23457788888899999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++...++++|.+|+|||...++.+.+.+.+.++..+++|+.+.++++++.++.|++.. .|+|+++||.++..|..|.++
T Consensus       105 ~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gysa  184 (331)
T KOG1210|consen  105 ELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSA  184 (331)
T ss_pred             hhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccc
Confidence            9988889999999999999999999999999999999999999999999999999876 689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |+++|+|+.+|+..+++|+.++||+|....|+.+ |+-+++.
T Consensus       185 Ys~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E  226 (331)
T KOG1210|consen  185 YSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE  226 (331)
T ss_pred             cccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc
Confidence            9999999999999999999999999999999999 7655543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=8.3e-29  Score=194.50  Aligned_cols=185  Identities=29%  Similarity=0.375  Sum_probs=156.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   86 (223)
                      |++|||||+++||++++++|+++|++|++..+        ++....++...++...+.   .+.+|+.|.++++++++.+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~   73 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQ--------QNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAI   73 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC--------CChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999999987532        144455555555554332   3567899999999999999


Q ss_pred             HHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCcEEEEecCcccccCCC-C
Q psy16220         87 LENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN---YGRLVMTASNSGLLGNFG-Q  161 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~-~  161 (223)
                      .+.++++|+||||+|.. ...++.+.+.++|+.++++|+.+++.+++.+++.+.++.   .|+||++||..+..+.++ .
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~  153 (247)
T PRK09730         74 DQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEY  153 (247)
T ss_pred             HHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcc
Confidence            98999999999999975 345677889999999999999999999999999987652   478999999988888776 4


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|+++|++++.++++++.|+.+.||++++|.||.+ +++..
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        154 VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence            689999999999999999999999999999999999 66543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=4.6e-29  Score=195.09  Aligned_cols=181  Identities=20%  Similarity=0.258  Sum_probs=150.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +++++++++||||+++||+++|++|+++|+ +|++++|+         ....++    .......+..|+.|.++++.++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~---------~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   68 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD---------PESVTD----LGPRVVPLQLDVTDPASVAAAA   68 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecC---------hhhhhh----cCCceEEEEecCCCHHHHHHHH
Confidence            467889999999999999999999999999 99999873         322221    1111122345666655554443


Q ss_pred             HHHHHhcCCccEEEeccCC-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                          +.++++|++||++|. ....++.+.+.+++++.+++|+.+++.+++.+.+.+++.+.+++|++||..+..+.++..
T Consensus        69 ----~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~  144 (238)
T PRK08264         69 ----EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLG  144 (238)
T ss_pred             ----HhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCch
Confidence                446789999999998 455677888999999999999999999999999999887778999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .|+++|++++.+++.++.++.++||+++++.||.+ +++..
T Consensus       145 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~  185 (238)
T PRK08264        145 TYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA  185 (238)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc
Confidence            99999999999999999999999999999999999 66543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=8.7e-29  Score=195.26  Aligned_cols=184  Identities=38%  Similarity=0.584  Sum_probs=160.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||+++||++++++|+++|++|++++|         +....+.+.+++...+.   .+..|+.|..+++.+++.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDL---------GEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAA   71 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999987         44444455555443222   345688888888899999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|++||++|.....+..+.+.+++++++++|+.+++.+++.+++.+++.+.+++|++||..+..+.+....|+
T Consensus        72 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~  151 (255)
T TIGR01963        72 AAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYV  151 (255)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhH
Confidence            98888999999999998776677778899999999999999999999999999888778999999998888889999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      .+|++++.++++++.++.+.+|+++.+.||.+ +++.
T Consensus       152 ~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~  188 (255)
T TIGR01963       152 AAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV  188 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence            99999999999999999888999999999999 6654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=1.3e-28  Score=193.55  Aligned_cols=187  Identities=25%  Similarity=0.342  Sum_probs=156.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh----CCccccccCCccchHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GGKAVPNYNSVVDGDK   81 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   81 (223)
                      ..+++++|||||+++||++++++|+++|++|++++|.        .....+.....+...    ...+..|+.|..+++.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   74 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR--------SAAEADALAAELNALRPGSAAALQADLLDPDALPE   74 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHH
Confidence            3567899999999999999999999999999999873        222333333344332    2234568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++.+.+.++++|+||||||.....++.+.+.++++.++++|+.+++.+++.+.|.+.+.. +.+++++|..+..+.++.
T Consensus        75 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  153 (249)
T PRK09135         75 LVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-GAIVNITDIHAERPLKGY  153 (249)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-eEEEEEeChhhcCCCCCc
Confidence            9999989999999999999987767777788899999999999999999999999987653 788888888777888889


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|+.+|++++.++++++.++.+ +|++++|.||++ ++...
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence            99999999999999999999865 799999999999 66543

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=3e-28  Score=192.43  Aligned_cols=183  Identities=23%  Similarity=0.333  Sum_probs=155.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||+++||++++++|+++|++|++++|         +.+..+... ..  ....+.+|+.|..+++..++.+.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r---------~~~~~~~~~-~~--~~~~~~~D~~~~~~~~~~~~~i~~~   70 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACR---------KPDDVARMN-SL--GFTGILLDLDDPESVERAADEVIAL   70 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHhHHHH-hC--CCeEEEeecCCHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999987         433333221 11  1234556888877777878877664


Q ss_pred             c-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         90 F-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        90 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      . +++|++|||+|.....++.+.+.+++++++++|+.+++.+.+.+++.+.+.+.++||++||..+..+.++...|+++|
T Consensus        71 ~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  150 (256)
T PRK08017         71 TDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASK  150 (256)
T ss_pred             cCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHH
Confidence            3 689999999998766777888999999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++++.++++++.++.+.+|++++|.||.+ |++....
T Consensus       151 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  187 (256)
T PRK08017        151 YALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV  187 (256)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc
Confidence            99999999999999999999999999999 6655443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=4.4e-28  Score=189.38  Aligned_cols=183  Identities=38%  Similarity=0.613  Sum_probs=157.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHHHHH
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +||||++++||++++++|+++|++|++++|+.        ....+...+.+...+.   .+.+|++|..+++.+++.+.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSS--------EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEE   72 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCc--------hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999998732        2233344445544443   345688888888899999988


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      .++++|+|||++|.....++.+.+.+++++++++|+.+++.+++.+.+++.+.+.+++|++||..+..+.++...|+++|
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k  152 (239)
T TIGR01830        73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASK  152 (239)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHH
Confidence            89999999999998766667788899999999999999999999999999877678999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++++.++++|+.++.+.|++++++.||.+ +++..
T Consensus       153 ~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~  187 (239)
T TIGR01830       153 AGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD  187 (239)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh
Confidence            99999999999999989999999999999 55443

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>KOG1199|consensus

Probab=99.96  E-value=5.3e-31  Score=188.09  Aligned_cols=190  Identities=33%  Similarity=0.399  Sum_probs=160.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      -+.+|-+.|||||.+|+|++.|..|+++|+.|++.|.         -+.+.++..+++.........|++++.+++..+.
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldl---------p~skg~~vakelg~~~vf~padvtsekdv~aala   75 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDL---------PQSKGADVAKELGGKVVFTPADVTSEKDVRAALA   75 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeC---------CcccchHHHHHhCCceEEeccccCcHHHHHHHHH
Confidence            3467889999999999999999999999999999986         3344445555554433334458888999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCC------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCcEEEEecC
Q psy16220         85 TALENFGRIDIVINNAGILRD------KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASN  152 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~vsS~  152 (223)
                      ....+||++|.+|||||+...      ..-...+.+++++.+++|+.++|++++.-..+|-+..      .|.||+..|.
T Consensus        76 ~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasv  155 (260)
T KOG1199|consen   76 KAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASV  155 (260)
T ss_pred             HHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeecee
Confidence            999999999999999997532      2234467899999999999999999999988887542      4789999999


Q ss_pred             cccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        153 SGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       153 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++.+..++.+|++||.++.+++--+++++++.|||++.|.||.+ |++...
T Consensus       156 aafdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss  207 (260)
T KOG1199|consen  156 AAFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS  207 (260)
T ss_pred             eeecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh
Confidence            999999999999999999999999999999999999999999999 555544

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=4.6e-28  Score=189.39  Aligned_cols=182  Identities=20%  Similarity=0.267  Sum_probs=151.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++|+++||||+++||.++++.|+++|++|++++|         +....+...+.+...  ...+.+|+.+..+.+.++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   72 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR---------NENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVI   72 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHH
Confidence            467899999999999999999999999999999987         444444444444432  233466888888889999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~  162 (223)
                      +++.+.++++|.+|+++|.....+..+  .++++.++++|+.+++.+.+.++|++.+.  +++|++||..+.. +.+...
T Consensus        73 ~~~~~~~~~id~ii~~ag~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~~~~~~~~~  148 (238)
T PRK05786         73 EKAAKVLNAIDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEG--SSIVLVSSMSGIYKASPDQL  148 (238)
T ss_pred             HHHHHHhCCCCEEEEcCCCcCCCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcC--CEEEEEecchhcccCCCCch
Confidence            988888899999999998755433333  38899999999999999999999998654  8999999987643 566778


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      .|+++|++++.++++++.++.+.||++++|.||++ +++
T Consensus       149 ~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~  187 (238)
T PRK05786        149 SYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF  187 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence            89999999999999999999999999999999999 654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.96  E-value=1.5e-28  Score=191.96  Aligned_cols=177  Identities=19%  Similarity=0.233  Sum_probs=138.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      |+++||||++|||+++|++|+++|  +.+++.+|+...           .. .  ......+.+|+++.++++.    +.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~-----------~~-~--~~~~~~~~~Dls~~~~~~~----~~   62 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP-----------DF-Q--HDNVQWHALDVTDEAEIKQ----LS   62 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc-----------cc-c--cCceEEEEecCCCHHHHHH----HH
Confidence            479999999999999999999985  556655542111           00 0  0111234556666665554    45


Q ss_pred             HhcCCccEEEeccCCCCC------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---cC
Q psy16220         88 ENFGRIDIVINNAGILRD------KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---GN  158 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---~~  158 (223)
                      ++++++|+||||||....      .++.+.+.+.|++.+++|+.+++.+++.++|.|++.+.++|+++||..+..   +.
T Consensus        63 ~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~  142 (235)
T PRK09009         63 EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRL  142 (235)
T ss_pred             HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCC
Confidence            667899999999998642      346678889999999999999999999999999887778999999866533   34


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCC--CCeEEEEEeCCCc-ccccccC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEK--NNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~--~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++...|+++|+++++|+++|+.|+++  .+|+|++|+||++ |++..+.
T Consensus       143 ~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~  191 (235)
T PRK09009        143 GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF  191 (235)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch
Confidence            66789999999999999999999986  6999999999999 7776543

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-28  Score=190.68  Aligned_cols=172  Identities=20%  Similarity=0.222  Sum_probs=141.4

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHHHHHHHhc
Q psy16220         13 IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        13 lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      |||||++|||++++++|+++|++|++++|         +....+...++++.  ....+.+|++|.++++++++.    +
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~   67 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASR---------SRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----A   67 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----c
Confidence            69999999999999999999999999987         44444444444432  111334577777666665543    5


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHHH
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMA  170 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~a  170 (223)
                      +++|+||||+|.....++.+.+.+++++++++|+.+++.+.+  .+.+.  +.++||++||..+..+.++...|+++|++
T Consensus        68 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a  143 (230)
T PRK07041         68 GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAA  143 (230)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHH
Confidence            889999999998877778888999999999999999999999  44443  34899999999999999999999999999


Q ss_pred             HHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        171 LVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       171 ~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++++++++.|+.+  |++++++||++ |++...
T Consensus       144 ~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        144 LEALARGLALELAP--VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             HHHHHHHHHHHhhC--ceEEEEeecccccHHHHh
Confidence            99999999999975  99999999999 776543

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-28  Score=191.88  Aligned_cols=180  Identities=27%  Similarity=0.284  Sum_probs=143.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||++++++|+++|++|++++|+.        ....+....+++..+.   .+..|++|.++++++
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~--------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   74 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQK--------APRANKVVAEIEAAGGRASAVGADLTDEESVAAL   74 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc--------hHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            46789999999999999999999999999999987731        1223334444443322   345688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-----cc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-----LG  157 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-----~~  157 (223)
                      ++++.+.++++|++|||||......      .+++..+++|+.+++.+++.+.|+|.+.  ++||++||..+.     .+
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~  146 (248)
T PRK07806         75 MDTAREEFGGLDALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPAG--SRVVFVTSHQAHFIPTVKT  146 (248)
T ss_pred             HHHHHHhCCCCcEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccCC--ceEEEEeCchhhcCccccC
Confidence            9999888899999999998643211      1356788999999999999999998643  799999996543     23


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      .+....|+++|++++.++++++.|++++||+|++|.||++ +++.
T Consensus       147 ~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~  191 (248)
T PRK07806        147 MPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT  191 (248)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh
Confidence            3556789999999999999999999999999999999998 5543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-27  Score=186.14  Aligned_cols=174  Identities=14%  Similarity=0.144  Sum_probs=127.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|+++||||++|||+++|+.|+++|++|++++|+..        ...+.   ........+.+|++|..++     
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~--------~~~~~---~~~~~~~~~~~D~~~~~~~-----   73 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI--------NNSES---NDESPNEWIKWECGKEESL-----   73 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch--------hhhhh---hccCCCeEEEeeCCCHHHH-----
Confidence            4578999999999999999999999999999999987321        11111   1111112234455554433     


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCC-cEEEEecCcccccCCCC
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ--NYG-RLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g-~iv~vsS~~~~~~~~~~  161 (223)
                        .+.++++|+||||||...   ..+.+.++|++++++|+.+++.+++.++|.|.++  ..| .+++.||.++..+ ++.
T Consensus        74 --~~~~~~iDilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~  147 (245)
T PRK12367         74 --DKQLASLDVLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALS  147 (245)
T ss_pred             --HHhcCCCCEEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCC
Confidence              234678999999999743   3456789999999999999999999999999763  124 3445556555444 467


Q ss_pred             chhhhhHHHHHHH---HHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        162 ANYSAAKMALVGL---SNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       162 ~~y~~sK~a~~~~---~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ..|++||+|+..+   .+.++.|+.+.+|+|+++.||++ |++
T Consensus       148 ~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~  190 (245)
T PRK12367        148 PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL  190 (245)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc
Confidence            7899999998644   35555566788999999999999 664

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.95  E-value=4e-27  Score=175.42  Aligned_cols=192  Identities=17%  Similarity=0.194  Sum_probs=164.8

Q ss_pred             cccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      ..++||++||+|-  .+.|++.||+.+.++|+.++.++.+      .+-..+.+++.+++.+ ...+.+|+.++++++..
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~------e~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~   74 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQG------ERLEKRVEELAEELGS-DLVLPCDVTNDESIDAL   74 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEecc------HHHHHHHHHHHhhccC-CeEEecCCCCHHHHHHH
Confidence            4689999999997  4899999999999999999999752      1122333333333322 12467899999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         83 VQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++++.+++|++|+|||+.++...    +++.+.+.+.|...+++..++...+++++.|.|.+.  |.||.++-..+..-.
T Consensus        75 f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~g--gSiltLtYlgs~r~v  152 (259)
T COG0623          75 FATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNG--GSILTLTYLGSERVV  152 (259)
T ss_pred             HHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCC--CcEEEEEeccceeec
Confidence            99999999999999999998763    677789999999999999999999999999999886  899999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccccCC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDIL  205 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~~~  205 (223)
                      |++..-+.+|++|+.-+|.||.+++++|||||.|+.|++.++....+
T Consensus       153 PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI  199 (259)
T COG0623         153 PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI  199 (259)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc
Confidence            99999999999999999999999999999999999999965554444

>KOG1204|consensus

Probab=99.95  E-value=1.6e-28  Score=182.67  Aligned_cols=189  Identities=18%  Similarity=0.180  Sum_probs=142.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+|++|+||+++|||..+++.+.+++-......+.+...       ..+.+.............+.....-.+++++..+
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a-------~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r   77 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLA-------ELEGLKVAYGDDFVHVVGDITEEQLLGALREAPR   77 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccc-------cccceEEEecCCcceechHHHHHHHHHHHHhhhh
Confidence            468999999999999999988888776555544322111       1111000000000111123333333456677777


Q ss_pred             HhcCCccEEEeccCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCch
Q psy16220         88 ENFGRIDIVINNAGILRD---KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++.++.|++|||||...+   ...+.-+.++|+++|+.|+++.+.|.+.++|.+++.+ .+.+||+||.++..|.+++.+
T Consensus        78 ~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~  157 (253)
T KOG1204|consen   78 KKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAA  157 (253)
T ss_pred             hcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHH
Confidence            788999999999998765   2234778999999999999999999999999999885 789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ||.+|+|.++|.+.||.|-. ++|++.+++||.| |+|....
T Consensus       158 yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~i  198 (253)
T KOG1204|consen  158 YCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCI  198 (253)
T ss_pred             hhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHH
Confidence            99999999999999999954 7999999999999 6655443

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=179.70  Aligned_cols=177  Identities=17%  Similarity=0.247  Sum_probs=140.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |+++||||+++||++++++|+++|++|++++|         +....+++..   .....+..|+.+.++++.+++.+.. 
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r---------~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~-   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATAR---------DAAALAALQA---LGAEALALDVADPASVAGLAWKLDG-   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC---------CHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcC-
Confidence            58999999999999999999999999999987         3333332211   1122356688888777776665532 


Q ss_pred             cCCccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC---chh
Q psy16220         90 FGRIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ---ANY  164 (223)
Q Consensus        90 ~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~---~~y  164 (223)
                       +++|++|||+|....  .+..+.+.++|+.++++|+.+++.+++.+.|+|.+. .|+++++||..+..+....   ..|
T Consensus        69 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y  146 (222)
T PRK06953         69 -EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLY  146 (222)
T ss_pred             -CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCcccc
Confidence             479999999998632  455677899999999999999999999999998664 4899999998876664333   359


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++++++.++.++  .++++|+|+||++ |++..+
T Consensus       147 ~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        147 RASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             HHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC
Confidence            999999999999999886  4799999999999 776553

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.3e-25  Score=171.88  Aligned_cols=177  Identities=24%  Similarity=0.401  Sum_probs=143.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .|++|||||+++||++++++|+++ ++|++++|         +....++..+... ....+..|+.|..+++.++    +
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r---------~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~----~   67 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGR---------PAERLDELAAELP-GATPFPVDLTDPEAIAAAV----E   67 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeC---------CHHHHHHHHHHhc-cceEEecCCCCHHHHHHHH----H
Confidence            468999999999999999999999 99999987         4333333322221 1223345666655444443    3


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      .++++|+|||++|.....++.+.+.++|.+++++|+.+++.+.+.+++.+++.. +++|++||..+..+.++...|+.+|
T Consensus        68 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~~~~y~~~K  146 (227)
T PRK08219         68 QLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPGWGSYAASK  146 (227)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCCCchHHHHH
Confidence            456899999999987666777888999999999999999999999999988763 7999999999988888999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++++.+++.++.++... |++++|.||.+ ++...
T Consensus       147 ~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~  180 (227)
T PRK08219        147 FALRALADALREEEPGN-VRVTSVHPGRTDTDMQR  180 (227)
T ss_pred             HHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhh
Confidence            99999999999988766 99999999998 55443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=6.1e-25  Score=212.34  Aligned_cols=188  Identities=22%  Similarity=0.240  Sum_probs=152.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCC----CC-CC-------------------------------
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRD----GD-GK-------------------------------   50 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~----~~-~~-------------------------------   50 (223)
                      +++++|||||++|||.++|++|+++ |++|++++|+....    +. ..                               
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999988 69999999973110    00 00                               


Q ss_pred             --ChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhh
Q psy16220         51 --SSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT  125 (223)
Q Consensus        51 --~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  125 (223)
                        .........+++...+..   +.+|++|..+++++++++.+. +++|+||||||+...+.+.+.+.++|++++++|+.
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence              011222333444444443   356888888899999998776 68999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       126 ~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |++++++.+.+.+    .++||++||.++.++.+++..|+++|++++++++.++.++.  +++|++|+||++ +.|..
T Consensus      2155 G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2155 GLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            9999999875543    35899999999999999999999999999999999999974  589999999999 66543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.92  E-value=6.2e-24  Score=176.36  Aligned_cols=173  Identities=20%  Similarity=0.149  Sum_probs=122.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++++|+++||||++|||++++++|+++|++|++++|         +....+............+..|+.|.+++    
T Consensus       173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r---------~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v----  239 (406)
T PRK07424        173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTS---------NSDKITLEINGEDLPVKTLHWQVGQEAAL----  239 (406)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHhhcCCCeEEEEeeCCCHHHH----
Confidence            34678999999999999999999999999999999977         33222221111000111233455554332    


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC----CcEEEEecCcccccCC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY----GRLVMTASNSGLLGNF  159 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~iv~vsS~~~~~~~~  159 (223)
                         .+.++++|++|||||....   .+.+.+++++++++|+.+++.+++.++|.|++++.    +.+|++|+ +. ...+
T Consensus       240 ---~~~l~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~  311 (406)
T PRK07424        240 ---AELLEKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPA  311 (406)
T ss_pred             ---HHHhCCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCC
Confidence               2335689999999997532   36788999999999999999999999999987642    23555554 33 3334


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ....|++||+|+..+++ ++.+.  .++.+..+.||++ |++
T Consensus       312 ~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~  350 (406)
T PRK07424        312 FSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNL  350 (406)
T ss_pred             CchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCC
Confidence            56789999999999985 44443  3566777889998 554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=7.6e-24  Score=157.61  Aligned_cols=174  Identities=26%  Similarity=0.333  Sum_probs=139.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      |+++||||+++||++++++|+++|+ .|++.+|+....      .......+++...+.   .+..|+.+..+.+..++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   74 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA------PGAAELLAELEALGAEVTVVACDVADRAALAAALAA   74 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC------ccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            5789999999999999999999997 577776643211      111111233333333   244677777778888888


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|++||++|.....++.+.+.++++.++++|+.+++.+.+.+    .+.+.+++|++||..+..+.++...|+
T Consensus        75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~ii~~ss~~~~~~~~~~~~y~  150 (180)
T smart00822       75 IPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELT----RDLPLDFFVLFSSVAGVLGNPGQANYA  150 (180)
T ss_pred             HHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHh----ccCCcceEEEEccHHHhcCCCCchhhH
Confidence            8888899999999999877667788899999999999999999999988    334458999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ++|++++.+++.++.    .++.+.++.||++
T Consensus       151 ~sk~~~~~~~~~~~~----~~~~~~~~~~g~~  178 (180)
T smart00822      151 AANAFLDALAAHRRA----RGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHHHHHHh----cCCceEEEeeccc
Confidence            999999999987754    5788999999987

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.92  E-value=3.9e-24  Score=167.70  Aligned_cols=149  Identities=25%  Similarity=0.237  Sum_probs=122.4

Q ss_pred             HHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcCCccEEEeccCCCC
Q psy16220         25 YALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR  104 (223)
Q Consensus        25 ~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~  104 (223)
                      +|++|+++|++|++++|+..         ..+     .   ...+.+|++|.++++++++++.   +++|+||||||...
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~---------~~~-----~---~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREP---------GMT-----L---DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcc---------hhh-----h---hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC
Confidence            47899999999999988322         211     0   1135678888888888777663   68999999999652


Q ss_pred             CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---------------------------c
Q psy16220        105 DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---------------------------G  157 (223)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---------------------------~  157 (223)
                      .        +++++++++|+.+++.+++.++|+|.+.  |+||++||.++..                           +
T Consensus        61 ~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         61 T--------APVELVARVNFLGLRHLTEALLPRMAPG--GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             C--------CCHHHhhhhchHHHHHHHHHHHHhccCC--cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccC
Confidence            1        3588999999999999999999998653  8999999988762                           5


Q ss_pred             CCCCchhhhhHHHHHHHHHHHH-hhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLS-IEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~-~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++...|++||+++++++++++ .|++++||+||+|+||.+ |++..+
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        131 VALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc
Confidence            5678899999999999999999 999999999999999999 877654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=4.2e-23  Score=154.92  Aligned_cols=173  Identities=27%  Similarity=0.354  Sum_probs=133.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   86 (223)
                      ++|||||.+|||+.++++|+++|. ++++++|...      .....+...+++++.+..+   .+|++|.++++++++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~------~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~   75 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGA------PSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL   75 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGG------GSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCC------ccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence            689999999999999999999975 7888887421      1233445677777766655   45888888899999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .++++++++|||+||.....++.+.+.++++.++...+.+..+|.+.+    ...+..++|++||.++..|.+++..|++
T Consensus        76 ~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~----~~~~l~~~i~~SSis~~~G~~gq~~Yaa  151 (181)
T PF08659_consen   76 RQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEAL----ENRPLDFFILFSSISSLLGGPGQSAYAA  151 (181)
T ss_dssp             HTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHH----TTTTTSEEEEEEEHHHHTT-TTBHHHHH
T ss_pred             HhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHh----hcCCCCeEEEECChhHhccCcchHhHHH
Confidence            999999999999999988889999999999999999999999999987    4455679999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ++++++.|++..+..    |..+.+|+.|++
T Consensus       152 AN~~lda~a~~~~~~----g~~~~sI~wg~W  178 (181)
T PF08659_consen  152 ANAFLDALARQRRSR----GLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHHHHT----TSEEEEEEE-EB
T ss_pred             HHHHHHHHHHHHHhC----CCCEEEEEcccc
Confidence            999999999987754    566888988875

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478|consensus

Probab=99.90  E-value=5.7e-23  Score=155.27  Aligned_cols=189  Identities=21%  Similarity=0.241  Sum_probs=159.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC-----CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--c-----cccccCCc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG-----ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--K-----AVPNYNSV   76 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G-----~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~   76 (223)
                      .|++||||+++|||.++|+.|++..     .++++.+|         +..+.++.+..+.+...  .     +..|++++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR---------~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm   73 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCR---------NMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNM   73 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeC---------ChhHHHHHHHHHHHhCCCceeEEEEEEEehhhH
Confidence            5899999999999999999998764     34777777         88888888888877655  2     34588889


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCC---------------------------CCCCCHHHHHHHHHhhhhHHHH
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKS---------------------------FARISDTDWQLVQDVHLTGAFR  129 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~---------------------------~~~~~~~~~~~~~~~n~~~~~~  129 (223)
                      .++..+.+++.++|.++|.+..|||.+...-                           ....+.|++...+++|++|++.
T Consensus        74 ~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfy  153 (341)
T KOG1478|consen   74 QSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFY  153 (341)
T ss_pred             HHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhh
Confidence            9999999999999999999999999764311                           1235788899999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEecCcccc---------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        130 VSRAAWPHMKKQNYGRLVMTASNSGLL---------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       130 l~~~~~~~~~~~~~g~iv~vsS~~~~~---------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      +++.+.|++..+....+|.+||..+..         ...+..+|+.||.+.+-+.-++-+.+.+.|+..++++||.. |.
T Consensus       154 li~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  154 LIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             hHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence            999999999988777999999987644         34678899999999999999999999999999999999998 55


Q ss_pred             ccccCCC
Q psy16220        200 LTEDILP  206 (223)
Q Consensus       200 ~~~~~~~  206 (223)
                      +....++
T Consensus       234 ~~~~~l~  240 (341)
T KOG1478|consen  234 SFSEYLN  240 (341)
T ss_pred             hhhhhhh
Confidence            5555443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=3.5e-21  Score=157.23  Aligned_cols=164  Identities=14%  Similarity=0.113  Sum_probs=119.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||+|+||++++++|+++|  ++|++++|         +......+.+.+.. ....+..|+.|..++.+++
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r---------~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~   72 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSR---------DELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL   72 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcC---------ChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH
Confidence            468999999999999999999999986  78988876         22222222222211 1112234555554443332


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                             ..+|+|||+||.... +..+.+   ..+++++|+.+++++++++.+    .+.++||++||.....|   ...
T Consensus        73 -------~~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~  134 (324)
T TIGR03589        73 -------RGVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INL  134 (324)
T ss_pred             -------hcCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCH
Confidence                   358999999996432 222222   346899999999999999854    34579999999765433   467


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      |+++|++.+.++++++.+.+..|+++++|.||.+
T Consensus       135 Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v  168 (324)
T TIGR03589       135 YGATKLASDKLFVAANNISGSKGTRFSVVRYGNV  168 (324)
T ss_pred             HHHHHHHHHHHHHHHHhhccccCcEEEEEeecce
Confidence            9999999999999999888888999999999999

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.87  E-value=5.7e-21  Score=155.25  Aligned_cols=195  Identities=14%  Similarity=0.064  Sum_probs=138.2

Q ss_pred             CCcEEEEEcCCCchHHH--HHHHHHHcCCeEEEEccCCCCCCCCCC----hhhhhHHHHHHHHhCC---ccccccCCccc
Q psy16220          8 DGRVAIVTGAGAGLGRS--YALLLAERGASVVVNDLGGQRDGDGKS----SKAADTVVAEIRSKGG---KAVPNYNSVVD   78 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a--~a~~l~~~G~~vv~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~~~   78 (223)
                      .+|++||||+++|||.+  +|+.| +.|++++++++...+.. .+.    =...+.+.+.+.+.+.   .+.+|+.+.++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~-~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTE-KKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhh-hcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            46899999999999999  89999 99999988876321100 000    0011222333333332   34679999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCC-----------------CC-----------------CCCHHHHHHHHHhhh
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKS-----------------FA-----------------RISDTDWQLVQDVHL  124 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n~  124 (223)
                      ++++++++.+.+|++|+||||+|......                 +.                 ..+.++++.++.+.=
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence            99999999999999999999999763211                 11                 234445555544332


Q ss_pred             h-HH--HHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC--chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCccc
Q psy16220        125 T-GA--FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASR  199 (223)
Q Consensus       125 ~-~~--~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~  199 (223)
                      . ..  |.=.....+.|.+.  +++|..|+.......|.+  ..-+.+|++|+..++.|+.+|++.||++|++++|++.+
T Consensus       198 gedw~~Wi~al~~a~lla~g--~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T  275 (398)
T PRK13656        198 GEDWELWIDALDEAGVLAEG--AKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVT  275 (398)
T ss_pred             cchHHHHHHHHHhcccccCC--cEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccc
Confidence            2 11  22244444555443  899999999888877776  48899999999999999999999999999999999965


Q ss_pred             ccccCCC
Q psy16220        200 LTEDILP  206 (223)
Q Consensus       200 ~~~~~~~  206 (223)
                      .....+|
T Consensus       276 ~Ass~Ip  282 (398)
T PRK13656        276 QASSAIP  282 (398)
T ss_pred             hhhhcCC
Confidence            5555554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.85  E-value=4.5e-20  Score=152.25  Aligned_cols=171  Identities=17%  Similarity=0.091  Sum_probs=122.8

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH--HhCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++||++|||||+|+||.++++.|+++|++|++++|+...         .......+.  .....+..|+.|..++.++++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   72 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPT---------SPNLFELLNLAKKIEDHFGDIRDAAKLRKAIA   72 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCcc---------chhHHHHHhhcCCceEEEccCCCHHHHHHHHh
Confidence            468999999999999999999999999999999874221         111111111  111123446666555555444


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--------  156 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~--------  156 (223)
                      ..     ++|+|||+|+...    ...+.+++...+++|+.+++++++.+...   ...++||++||...+.        
T Consensus        73 ~~-----~~d~vih~A~~~~----~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~  140 (349)
T TIGR02622        73 EF-----KPEIVFHLAAQPL----VRKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGY  140 (349)
T ss_pred             hc-----CCCEEEECCcccc----cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCC
Confidence            32     6899999999532    23345667789999999999999987321   1146999999964321        


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHhhhCC----CCeEEEEEeCCCcc
Q psy16220        157 ----GNFGQANYSAAKMALVGLSNTLSIEGEK----NNIHCNVIVPTAAS  198 (223)
Q Consensus       157 ----~~~~~~~y~~sK~a~~~~~~~l~~e~~~----~~i~v~~v~Pg~vt  198 (223)
                          +..+...|+.+|.+++.+++.++.++.+    ++++++++.|+.+.
T Consensus       141 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vy  190 (349)
T TIGR02622       141 RETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVI  190 (349)
T ss_pred             ccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCccc
Confidence                1234678999999999999999988754    48999999999983

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.84  E-value=7e-20  Score=156.09  Aligned_cols=164  Identities=14%  Similarity=0.087  Sum_probs=120.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----C-------CccccccC
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----G-------GKAVPNYN   74 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~   74 (223)
                      .+||++|||||+|+||++++++|+++|++|++++|         +....+.+.+++...     +       ..+..|+.
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R---------n~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt  148 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR---------SAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE  148 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence            36899999999999999999999999999999987         555555444443321     1       11233554


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      |.+++       .+.++++|+||||+|....      ...++...+++|+.+..++++++.    ..+.++||++||.++
T Consensus       149 D~esI-------~~aLggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga  211 (576)
T PLN03209        149 KPDQI-------GPALGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGT  211 (576)
T ss_pred             CHHHH-------HHHhcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchh
Confidence            43332       2345789999999986432      122477889999999999999874    445689999999876


Q ss_pred             c-ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        155 L-LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       155 ~-~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                      . .+.+.. .|. +|+++..+.+.+..++++.||+++.|+||++.
T Consensus       212 ~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~  254 (576)
T PLN03209        212 NKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGME  254 (576)
T ss_pred             cccCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeec
Confidence            3 333222 244 78888888899999998999999999999983

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=6.8e-19  Score=143.81  Aligned_cols=164  Identities=15%  Similarity=0.107  Sum_probs=118.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-----hCCccccccCCccchHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-----KGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   82 (223)
                      ++|++|||||+|+||++++++|+++|++|++++|+..         ...........     ....+..|++|..+++++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   74 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPK---------DRKKTDHLLALDGAKERLKLFKADLLDEGSFELA   74 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCc---------chhhHHHHHhccCCCCceEEEeCCCCCchHHHHH
Confidence            4789999999999999999999999999998877322         11111111111     111234466666555444


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---  159 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~---  159 (223)
                      ++       ++|+|||+||....    ..+.+++...+++|+.+++++++.+.+.+   +.++||++||..+..+..   
T Consensus        75 ~~-------~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~  140 (325)
T PLN02989         75 ID-------GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKL  140 (325)
T ss_pred             Hc-------CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccC
Confidence            43       58999999996421    23445678999999999999999986653   236999999976654311   


Q ss_pred             -------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 -------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 -------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                         ....|+.+|.+.+.+++.++.+   .|+.++.+.|+.+
T Consensus       141 ~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v  194 (325)
T PLN02989        141 GPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLV  194 (325)
T ss_pred             CCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCce
Confidence                               0246999999999999988766   4899999999999

>PRK06720 hypothetical protein; Provisional

Probab=99.81  E-value=1.3e-18  Score=128.69  Aligned_cols=139  Identities=29%  Similarity=0.481  Sum_probs=107.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +++++|+++||||++|||+++|+.|+++|++|++++|         +....+...+++...+.   .+.+|+.+..+.++
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   82 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI---------DQESGQATVEEITNLGGEALFVSYDMEKQGDWQR   82 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            5578999999999999999999999999999999987         44444444555543332   24568888888889


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-------CCcEEEEecCc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-------YGRLVMTASNS  153 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~vsS~~  153 (223)
                      +++++.+.++++|++|||||.... .++.+.+.++ ++  .+|+.+.+..++.+.++|.+++       .||+..|||.+
T Consensus        83 ~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (169)
T PRK06720         83 VISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG  159 (169)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence            999999999999999999998764 3444444444 33  7788888999999999987653       47888888865


Q ss_pred             cc
Q psy16220        154 GL  155 (223)
Q Consensus       154 ~~  155 (223)
                      ..
T Consensus       160 ~~  161 (169)
T PRK06720        160 QS  161 (169)
T ss_pred             cc
Confidence            43

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.79  E-value=9.5e-18  Score=142.11  Aligned_cols=180  Identities=15%  Similarity=0.030  Sum_probs=121.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCC---CCh-----hhhhHHHHHHHH----hCCccccc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDG---KSS-----KAADTVVAEIRS----KGGKAVPN   72 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~---~~~-----~~~~~~~~~~~~----~~~~~~~~   72 (223)
                      -.+++|++|||||+|+||++++++|+++|++|+++++...+....   .+.     ...+. .+.+..    ....+..|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHER-VRRWKEVSGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHH-HHHHHHhhCCcceEEECC
Confidence            457789999999999999999999999999999987532211000   000     00011 111111    12233446


Q ss_pred             cCCccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEec
Q psy16220         73 YNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTAS  151 (223)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS  151 (223)
                      +.|...+.++++..     ++|+|||+|+... .+....+.++++..+++|+.+++++++.+..    .+. .++|++||
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv~~~~V~~SS  191 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAPDCHLVKLGT  191 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCCCccEEEEec
Confidence            66655555544432     6999999997533 2334445567788899999999999998743    222 48999998


Q ss_pred             Ccccc------------------------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        152 NSGLL------------------------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       152 ~~~~~------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                      ...+-                        +..+...|+.||.+.+.+++.++..   +|+.+..+.|+.+.
T Consensus       192 ~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vy  259 (442)
T PLN02572        192 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVY  259 (442)
T ss_pred             ceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEeccccc
Confidence            65331                        1112357999999999999887765   58999999999983

>PLN02214 cinnamoyl-CoA reductase

Probab=99.78  E-value=1.2e-17  Score=137.43  Aligned_cols=166  Identities=21%  Similarity=0.194  Sum_probs=116.9

Q ss_pred             CCCccc-cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCc
Q psy16220          1 MPEQVR-FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSV   76 (223)
Q Consensus         1 m~~~~~-~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   76 (223)
                      ||.++. +++|++|||||+|+||++++++|+++|++|++++|+...        ........+......   +..|+.|.
T Consensus         1 ~~~~~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~d~   72 (342)
T PLN02214          1 MPVDVASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD--------PKNTHLRELEGGKERLILCKADLQDY   72 (342)
T ss_pred             CCcccccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh--------hhHHHHHHhhCCCCcEEEEecCcCCh
Confidence            775544 567899999999999999999999999999999873211        011111222211111   23355444


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+...++       ..+|+|||+|+...         +++.+.+++|+.++.++++++.    +.+.++||++||..+.+
T Consensus        73 ~~~~~~~-------~~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avy  132 (342)
T PLN02214         73 EALKAAI-------DGCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVY  132 (342)
T ss_pred             HHHHHHH-------hcCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeee
Confidence            4333332       25899999998532         2457789999999999999974    34446999999976544


Q ss_pred             cCC---------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 GNF---------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ~~~---------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +.+                     ....|+.||.+.+.+++.++.+   .|+.+..+.|+.|
T Consensus       133 g~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~v  191 (342)
T PLN02214        133 MDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLV  191 (342)
T ss_pred             ccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCce
Confidence            211                     1246999999999999988776   4899999999999

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=1.3e-17  Score=136.09  Aligned_cols=169  Identities=17%  Similarity=0.137  Sum_probs=114.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH--HHhCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI--RSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ..||++|||||+|+||.+++++|+++|++|+++.|+...      ...........  ......+..|+.|..+..++++
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD------RKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcc------hHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh
Confidence            568999999999999999999999999999988773221      11111111100  0011123345655554444333


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCC----
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNF----  159 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~----  159 (223)
                             .+|+|||+|+.....     ..+...+++++|+.++.++++.+...   .+.++||++||.++.. +.+    
T Consensus        77 -------~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~  141 (322)
T PLN02986         77 -------GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEA  141 (322)
T ss_pred             -------CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCC
Confidence                   589999999964321     11234568899999999999987322   2346999999976531 110    


Q ss_pred             -----------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        160 -----------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       160 -----------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                                       ....|+.||.+.+.+++.+..+   .|+.++++.|+.+ .+
T Consensus       142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp  196 (322)
T PLN02986        142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGP  196 (322)
T ss_pred             CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCC
Confidence                             1356999999999999988766   4899999999999 44

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.77  E-value=2e-17  Score=135.93  Aligned_cols=167  Identities=18%  Similarity=0.148  Sum_probs=115.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++++|||||+|+||++++++|+++|++|++++|+...      ...... ...+..  ....+..|+.|..++...+
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN------QKKIAH-LRALQELGDLKIFGADLTDEESFEAPI   78 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC------HHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHH
Confidence            4668999999999999999999999999999888773211      111100 111111  1112334555554433322


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----  158 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----  158 (223)
                             .++|+|||+|+...   .  ...+.+...+++|+.++.++++.+...   .+.++||++||.+.+.+.     
T Consensus        79 -------~~~d~vih~A~~~~---~--~~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~  143 (338)
T PLN00198         79 -------AGCDLVFHVATPVN---F--ASEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGT  143 (338)
T ss_pred             -------hcCCEEEEeCCCCc---c--CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCC
Confidence                   35899999998532   1  112345567899999999999997442   234699999997654311     


Q ss_pred             -------------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -------------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                         ++...|+.||.+.+.+++.++.+   +|+.+..+.|+.|
T Consensus       144 ~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~v  198 (338)
T PLN00198        144 GLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLM  198 (338)
T ss_pred             CceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCce
Confidence                               23457999999999999998776   5899999999998

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.76  E-value=1.8e-17  Score=136.31  Aligned_cols=178  Identities=17%  Similarity=0.069  Sum_probs=116.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH---hCCccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   82 (223)
                      +.++|++|||||+|+||++++++|+++|++|++++|.....    .....+........   ....+..|+.|..++.++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   78 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNF----NTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW   78 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccc----cccchhhhccccccccCceEEEEecCCCHHHHHHH
Confidence            35688999999999999999999999999999998743211    01111111111000   112234466665555555


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc----
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG----  157 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~----  157 (223)
                      ++..     .+|+|||+|+.....    ...++....+++|+.++.++++.+.+...+.+ .-++|++||...+-.    
T Consensus        79 ~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~  149 (340)
T PLN02653         79 LDDI-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPP  149 (340)
T ss_pred             HHHc-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCC
Confidence            5442     599999999975432    22344567789999999999999877754321 127888887532211    


Q ss_pred             ------CCCCchhhhhHHHHHHHHHHHHhhhCC---CCeEEEEEeCCC
Q psy16220        158 ------NFGQANYSAAKMALVGLSNTLSIEGEK---NNIHCNVIVPTA  196 (223)
Q Consensus       158 ------~~~~~~y~~sK~a~~~~~~~l~~e~~~---~~i~v~~v~Pg~  196 (223)
                            ..+...|+.||.+.+.++++++.++.-   .++.++...|+.
T Consensus       150 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~  197 (340)
T PLN02653        150 QSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR  197 (340)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence                  123568999999999999999888642   234445555654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.76  E-value=5.5e-17  Score=134.00  Aligned_cols=165  Identities=18%  Similarity=0.078  Sum_probs=114.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----CCccccccCCccchHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   82 (223)
                      +.|++|||||+|+||.+++++|+++|++|++++|+.         .............     ...+..|+.|...++.+
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~   74 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDP---------ANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDA   74 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCc---------chhHHHHHHHhccCCCCceEEEEecCCChhhHHHH
Confidence            467999999999999999999999999999988732         1221111111111     11223455555444433


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----  158 (223)
                      ++       .+|+|||+|+.....     ..+.++..+++|+.++.++++.+.+..   ..++||++||.....+.    
T Consensus        75 ~~-------~~d~ViH~A~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~  139 (351)
T PLN02650         75 IR-------GCTGVFHVATPMDFE-----SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQK  139 (351)
T ss_pred             Hh-------CCCEEEEeCCCCCCC-----CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCC
Confidence            32       589999999854311     123346789999999999999985431   13589999997543211    


Q ss_pred             C------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        159 F------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       159 ~------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      +                  ....|+.||.+.+.+++.++.+   +|++++.+.|+.+ .+
T Consensus       140 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp  196 (351)
T PLN02650        140 PVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGP  196 (351)
T ss_pred             CccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECC
Confidence            0                  1237999999999999998876   5899999999998 44

>PLN02583 cinnamoyl-CoA reductase

Probab=99.75  E-value=1e-16  Score=129.42  Aligned_cols=168  Identities=13%  Similarity=0.031  Sum_probs=112.6

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      -.+|++|||||+|+||++++++|+++|++|+++.|+..       ..........+......+.....|..+.+.+.+. 
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~-------~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~-   75 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNG-------ETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA-   75 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCch-------hhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH-
Confidence            35789999999999999999999999999999877311       1112222222221111222222333333332222 


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-C------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-F------  159 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~------  159 (223)
                         +...|+++|.++....     .+ .++++++++|+.+++++++++.+.+   ..++||++||.++.... +      
T Consensus        76 ---l~~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~  143 (297)
T PLN02583         76 ---LKGCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQK  143 (297)
T ss_pred             ---HcCCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCC
Confidence               2358899887653211     11 2467899999999999999986653   23699999997664211 0      


Q ss_pred             -------C--------CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 -------G--------QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 -------~--------~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                             .        ...|+.||...+.+++.++.+   .|+++++|+|+.|
T Consensus       144 ~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v  193 (297)
T PLN02583        144 DVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLL  193 (297)
T ss_pred             CCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcc
Confidence                   0        015999999999999888765   4899999999999

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.75  E-value=1.5e-16  Score=131.58  Aligned_cols=169  Identities=19%  Similarity=0.159  Sum_probs=114.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      ..+++++|||||+|+||++++++|+++|++|++++|         +..........+.. ...   +..|+.|..++.++
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~   76 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR---------DPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEA   76 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHH
Confidence            356789999999999999999999999999999877         32222222223221 122   23344444333332


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCC-CCCCCHHHH--HHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKS-FARISDTDW--QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-  158 (223)
                      +       ..+|+|||+|+...... ....+.+.+  ..++++|+.++.++++.+.+.   ...++||++||.+.+... 
T Consensus        77 ~-------~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~~~~~~v~~SS~~vyg~~~  146 (353)
T PLN02896         77 V-------KGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---KTVKRVVFTSSISTLTAKD  146 (353)
T ss_pred             H-------cCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---CCccEEEEEechhhccccc
Confidence            2       25899999999754321 122223332  346677889999999987543   124699999996554211 


Q ss_pred             ------------------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 ------------------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ------------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                              +....|+.||.+.+.+++.++.+   .|+.+.++.|+.+
T Consensus       147 ~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v  206 (353)
T PLN02896        147 SNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTV  206 (353)
T ss_pred             cCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcc
Confidence                                    11237999999999999988776   4899999999888

>PLN02240 UDP-glucose 4-epimerase

Probab=99.75  E-value=1.4e-16  Score=131.59  Aligned_cols=172  Identities=20%  Similarity=0.148  Sum_probs=115.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH---hCCccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||+|+||.+++++|+++|++|++++|...+     .........+....   ....+..|+.|..++..+
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~   76 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNS-----SEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKV   76 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcc-----hHHHHHHHHHhhcccCccceEEecCcCCHHHHHHH
Confidence            4678999999999999999999999999999998763211     11111111111111   111234466555555444


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc------
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL------  156 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~------  156 (223)
                      ++.     ..+|+|||+|+.....    .+.+++...+++|+.++.++++.+    .+.+..++|++||...+.      
T Consensus        77 ~~~-----~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~  143 (352)
T PLN02240         77 FAS-----TRFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVP  143 (352)
T ss_pred             HHh-----CCCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCC
Confidence            443     2799999999964321    233467789999999999999865    444456899999954321      


Q ss_pred             -----cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 -----GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 -----~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           +..+...|+.+|.+.+.+++.++.+  ..++.+..+.|+.+
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v  187 (352)
T PLN02240        144 CTEEFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNP  187 (352)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCc
Confidence                 1124578999999999999988765  23567777776443

>KOG1502|consensus

Probab=99.74  E-value=1.5e-16  Score=126.64  Aligned_cols=164  Identities=20%  Similarity=0.148  Sum_probs=119.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   84 (223)
                      .+++|+||||+|.||.++++.|+++||+|..+.|++.      + .+..+....++......   ..|+.|..+.+++++
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~------~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE------D-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc------h-hhhHHHHHhcccCcccceEEeccccccchHHHHHh
Confidence            6789999999999999999999999999999988432      1 11222334444333223   345555554444333


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccC-C---
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGN-F---  159 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~-~---  159 (223)
                             ++|+|+|.|........     +.-.+.++..+.|+.++.+++    ++.+ ..|||++||.++.... +   
T Consensus        78 -------gcdgVfH~Asp~~~~~~-----~~e~~li~pav~Gt~nVL~ac----~~~~sVkrvV~TSS~aAv~~~~~~~~  141 (327)
T KOG1502|consen   78 -------GCDGVFHTASPVDFDLE-----DPEKELIDPAVKGTKNVLEAC----KKTKSVKRVVYTSSTAAVRYNGPNIG  141 (327)
T ss_pred             -------CCCEEEEeCccCCCCCC-----CcHHhhhhHHHHHHHHHHHHH----hccCCcceEEEeccHHHhccCCcCCC
Confidence                   59999999986544221     123478999999999999998    4433 5799999998887643 1   


Q ss_pred             ------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 ------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                        ....|+.||.-.+.-+..++.|   .|+...+|+||+|
T Consensus       142 ~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV  194 (327)
T KOG1502|consen  142 ENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLV  194 (327)
T ss_pred             CCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCce
Confidence                              1135899999888888888888   4899999999999

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.74  E-value=6.9e-17  Score=133.55  Aligned_cols=169  Identities=12%  Similarity=0.037  Sum_probs=113.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEE-EccCCCCCCCCCChhhhhHHHHHHH-HhCCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVV-NDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      |++|||||+|+||+++++.|+++|+.+++ .++...       ............ .....+..|+.|..+++++++.  
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY-------AGNLMSLAPVAQSERFAFEKVDICDRAELARVFTE--   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc-------ccchhhhhhcccCCceEEEECCCcChHHHHHHHhh--
Confidence            48999999999999999999999987554 433110       001111110000 0111234466666555554443  


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHH---h--cCCCcEEEEecCcccc------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK---K--QNYGRLVMTASNSGLL------  156 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~g~iv~vsS~~~~~------  156 (223)
                         .++|+|||+||....    ..+.++++.++++|+.++.++++.+.+.+.   .  .+..++|++||.+.+-      
T Consensus        73 ---~~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  145 (355)
T PRK10217         73 ---HQPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD  145 (355)
T ss_pred             ---cCCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC
Confidence               269999999986432    233456789999999999999999976532   1  1235899999854321      


Q ss_pred             -------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 -------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 -------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                             +..+...|+.||.+.+.+++.++.++   ++.+..+.|+.+
T Consensus       146 ~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v  190 (355)
T PRK10217        146 DFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNN  190 (355)
T ss_pred             CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeee
Confidence                   22346789999999999999998774   677888888877

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.73  E-value=6.4e-17  Score=133.20  Aligned_cols=159  Identities=14%  Similarity=0.072  Sum_probs=104.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH----HhCCccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      |++|||||+|+||++++++|+++|++|++++|.....    .......+.+...    .....+..|+.|..++.++++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   76 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSF----NTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDE   76 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCccc----chhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHh
Confidence            5899999999999999999999999999998743210    0011111111110    1112234466665555554443


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---------  156 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---------  156 (223)
                      .     ++|+|||+|+.....    ...+.-...+++|+.++.++++++.+.-.. +..++|++||...+-         
T Consensus        77 ~-----~~d~ViH~Aa~~~~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E  146 (343)
T TIGR01472        77 I-----KPTEIYNLAAQSHVK----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNE  146 (343)
T ss_pred             C-----CCCEEEECCcccccc----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCC
Confidence            2     589999999975432    122223567789999999999998553111 113799999954321         


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHhhh
Q psy16220        157 --GNFGQANYSAAKMALVGLSNTLSIEG  182 (223)
Q Consensus       157 --~~~~~~~y~~sK~a~~~~~~~l~~e~  182 (223)
                        +..+...|+.||.+.+.+++.++.++
T Consensus       147 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       147 TTPFYPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence              12245789999999999999998875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.72  E-value=2e-16  Score=129.05  Aligned_cols=165  Identities=19%  Similarity=0.175  Sum_probs=111.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH---hCCccccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++|++|||||+|+||++++++|+++|++|++++|+...      ........ ....   ....+..|+.|..+...++ 
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~-   74 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND------PKKTEHLL-ALDGAKERLHLFKANLLEEGSFDSVV-   74 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc------hhhHHHHH-hccCCCCceEEEeccccCcchHHHHH-
Confidence            57899999999999999999999999999988873211      11111110 1110   1112334666555444333 


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-cc-C----
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LG-N----  158 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~-~----  158 (223)
                            .++|+|||+|+.....     ..+..+.++++|+.++.++++.+....   +..+||++||.++. ++ .    
T Consensus        75 ------~~~d~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~  140 (322)
T PLN02662         75 ------DGCEGVFHTASPFYHD-----VTDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTP  140 (322)
T ss_pred             ------cCCCEEEEeCCcccCC-----CCChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCC
Confidence                  2589999999864321     112235788999999999999874321   34699999996532 21 1    


Q ss_pred             -----------C-----CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -----------F-----GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -----------~-----~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                 |     ....|+.+|.+.+.+++.+..+   .++++..+.|+.+
T Consensus       141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v  192 (322)
T PLN02662        141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMV  192 (322)
T ss_pred             CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcc
Confidence                       1     0147999999999999887765   4899999999998

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.69  E-value=1.3e-15  Score=125.10  Aligned_cols=166  Identities=18%  Similarity=0.169  Sum_probs=109.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||++++++|+++|++|++++|...+      ..........+... ...+..|+.|..++.++++.    
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNS------KRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD----   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCc------hHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc----
Confidence            69999999999999999999999999998753211      11110111111111 11234466655544444432    


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------C
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------N  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  158 (223)
                       .++|+|||+|+......    ..+.....+++|+.++.++++.+    ++.+.++||++||...+-.           .
T Consensus        72 -~~~d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~  142 (338)
T PRK10675         72 -HAIDTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPT  142 (338)
T ss_pred             -CCCCEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCC
Confidence             37999999998654321    12334568899999999998875    4445578999999643211           0


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .....|+.+|.+.+.+++.++.+.  .++++..+.|+.+
T Consensus       143 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v  180 (338)
T PRK10675        143 GTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNP  180 (338)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeee
Confidence             236789999999999999987663  3566777776544

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.69  E-value=1.1e-15  Score=126.05  Aligned_cols=171  Identities=13%  Similarity=0.050  Sum_probs=114.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH----hCCccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   80 (223)
                      +.+++|++|||||+|.||.+++++|+++|++|++++|....     ..............    ....+..|+.|..+..
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~   85 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTG-----YQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQ   85 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCc-----chhhhhhhhhccccccCCceEEEEccCCCHHHHH
Confidence            45678999999999999999999999999999999874221     11111111111111    1111233444433222


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--  158 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~--  158 (223)
                          .+.   ..+|+|||.|+.....    .+.++....+++|+.++.++++.+    ++.+..++|++||...+-..  
T Consensus        86 ----~~~---~~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~  150 (348)
T PRK15181         86 ----KAC---KNVDYVLHQAALGSVP----RSLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPD  150 (348)
T ss_pred             ----HHh---hCCCEEEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCC
Confidence                222   2589999999964321    112234567999999999999987    44445689999986433211  


Q ss_pred             ---------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        159 ---------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       159 ---------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                               .+...|+.+|.+.+.+++.++.+   .|+++..+.|+.+.
T Consensus       151 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vy  196 (348)
T PRK15181        151 LPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVF  196 (348)
T ss_pred             CCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEeccee
Confidence                     13467999999999999887665   48999999999883

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.68  E-value=3e-15  Score=125.73  Aligned_cols=170  Identities=16%  Similarity=0.178  Sum_probs=130.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   82 (223)
                      .++||++|||||+|.||.++|+++++.+. ++++.+|         ++.+......+++...  ....+...|..|.+.+
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~---------~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~  317 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSR---------DEYKLYLIDMELREKFPELKLRFYIGDVRDRDRV  317 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecC---------chHHHHHHHHHHHhhCCCcceEEEecccccHHHH
Confidence            36899999999999999999999999875 5777766         7777777777777652  3344455555555443


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      .... +. -++|+++|.|+.=+- |+   -..+..+.+++|++|+.++++++    .+.+..++|++|+--+..|   ..
T Consensus       318 ~~~~-~~-~kvd~VfHAAA~KHV-Pl---~E~nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~P---tN  384 (588)
T COG1086         318 ERAM-EG-HKVDIVFHAAALKHV-PL---VEYNPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNP---TN  384 (588)
T ss_pred             HHHH-hc-CCCceEEEhhhhccC-cc---hhcCHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCC---ch
Confidence            3332 22 279999999995332 22   23456788999999999999998    5556679999999888876   57


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .|+++|...+.++.+++......+-++.+|.=|.|
T Consensus       385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNV  419 (588)
T COG1086         385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNV  419 (588)
T ss_pred             HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecce
Confidence            89999999999999999877655778888988887

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.68  E-value=1.8e-15  Score=119.37  Aligned_cols=165  Identities=19%  Similarity=0.179  Sum_probs=104.3

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+++++|||||+|+||+++++.|+++|++|+++.|         +.......... ......+..|+.|.  .+.    +
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~~~~-~~~~~~~~~Dl~d~--~~~----l   78 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR---------DVDKAKTSLPQ-DPSLQIVRADVTEG--SDK----L   78 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEec---------CHHHHHHhccc-CCceEEEEeeCCCC--HHH----H
Confidence            45789999999999999999999999999998877         33332221111 00111223455442  122    2


Q ss_pred             HHhc-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---cCCCCc
Q psy16220         87 LENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---GNFGQA  162 (223)
Q Consensus        87 ~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---~~~~~~  162 (223)
                      .+.+ .++|+||+++|.....  ..      ...+++|..++..+++.+    .+.+.++||++||...+.   +.+...
T Consensus        79 ~~~~~~~~d~vi~~~g~~~~~--~~------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~  146 (251)
T PLN00141         79 VEAIGDDSDAVICATGFRRSF--DP------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNP  146 (251)
T ss_pred             HHHhhcCCCEEEECCCCCcCC--CC------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCc
Confidence            3333 3799999999864211  11      112467888888888886    455568999999976432   223344


Q ss_pred             hhhhhHHHHHHHHHHHHhh--hCCCCeEEEEEeCCCc-cc
Q psy16220        163 NYSAAKMALVGLSNTLSIE--GEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e--~~~~~i~v~~v~Pg~v-t~  199 (223)
                      .|...|.+...+...+..|  +...|+++++|.||.+ ++
T Consensus       147 ~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~  186 (251)
T PLN00141        147 AYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTND  186 (251)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCC
Confidence            5766665544433333333  4567999999999998 44

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=2.3e-15  Score=117.45  Aligned_cols=156  Identities=13%  Similarity=0.120  Sum_probs=110.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +++|||||.|.||.+++.+|++.|+.|+++|.-..         ...+......  +.-+..|+.|..-.++++++    
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~---------g~~~~v~~~~--~~f~~gDi~D~~~L~~vf~~----   65 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSN---------GHKIALLKLQ--FKFYEGDLLDRALLTAVFEE----   65 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCC---------CCHHHhhhcc--CceEEeccccHHHHHHHHHh----
Confidence            37999999999999999999999999999985211         1111111111  23344466665544444443    


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----------  159 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  159 (223)
                       .++|.|||.||...-    ..+.++-.++++.|+.+++.|++++    ++.+...|||-||. +.+|.|          
T Consensus        66 -~~idaViHFAa~~~V----gESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStA-avYG~p~~~PI~E~~~  135 (329)
T COG1087          66 -NKIDAVVHFAASISV----GESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTA-AVYGEPTTSPISETSP  135 (329)
T ss_pred             -cCCCEEEECcccccc----chhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecch-hhcCCCCCcccCCCCC
Confidence             389999999996433    3466777899999999999999986    66665677776664 444332          


Q ss_pred             --CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEe
Q psy16220        160 --GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIV  193 (223)
Q Consensus       160 --~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~  193 (223)
                        ...+|+.||.+.+.+.+.+++..   +.++.++.
T Consensus       136 ~~p~NPYG~sKlm~E~iL~d~~~a~---~~~~v~LR  168 (329)
T COG1087         136 LAPINPYGRSKLMSEEILRDAAKAN---PFKVVILR  168 (329)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHhC---CCcEEEEE
Confidence              45789999999999999999875   35555543

>PLN02686 cinnamoyl-CoA reductase

Probab=99.67  E-value=2.6e-15  Score=124.64  Aligned_cols=167  Identities=13%  Similarity=0.090  Sum_probs=111.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---------CCccccccCC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---------GGKAVPNYNS   75 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~   75 (223)
                      .++++|++|||||+|+||.+++++|+++|++|+++.|         +....+.+ .++...         ...+..|+.|
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r---------~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d  118 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD---------TQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTE  118 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH-HHHhhhccccccCCceEEEEcCCCC
Confidence            4577899999999999999999999999999988766         32222222 122110         1112335555


Q ss_pred             ccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc-
Q psy16220         76 VVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-  154 (223)
Q Consensus        76 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-  154 (223)
                      ..++.++++       .+|.++|.|+.........    ......++|+.++.++++++...   .+..++|++||..+ 
T Consensus       119 ~~~l~~~i~-------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~  184 (367)
T PLN02686        119 PESLHEAFD-------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLAC  184 (367)
T ss_pred             HHHHHHHHH-------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHh
Confidence            444333332       4789999998654322111    11345678999999999986321   13468999999631 


Q ss_pred             ccc----C------------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        155 LLG----N------------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       155 ~~~----~------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                      .++    .                  .....|+.||.+.+.+++.++.+   +|++++++.|+.|.
T Consensus       185 vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vy  247 (367)
T PLN02686        185 VWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVT  247 (367)
T ss_pred             cccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceE
Confidence            111    0                  02346999999999999988766   58999999999993

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.67  E-value=1.9e-15  Score=122.69  Aligned_cols=164  Identities=13%  Similarity=0.044  Sum_probs=111.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++|||||+|+||.+++++|++.|  ++|++++|....    +.....+    .+..  ....+..|+.|..++.++++..
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYA----GNLENLA----DLEDNPRYRFVKGDIGDRELVSRLFTEH   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcc----hhhhhhh----hhccCCCcEEEEcCCcCHHHHHHHHhhc
Confidence            48999999999999999999987  788887652111    0111111    1111  1112334666665555544432


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc----------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL----------  156 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~----------  156 (223)
                           ++|+|||+|+....    ..+.+.++.++++|+.++..+++.+.....   ..++|++||...+-          
T Consensus        73 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e  140 (317)
T TIGR01181        73 -----QPDAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTE  140 (317)
T ss_pred             -----CCCEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCC
Confidence                 59999999986532    123345678899999999999988744322   24899999854321          


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 --GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 --~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        +..+...|+.+|++.+.+++.++.+   .++++.++.|+.+
T Consensus       141 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i  180 (317)
T TIGR01181       141 TTPLAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNN  180 (317)
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccc
Confidence              1123457999999999999998776   4788999999987

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.66  E-value=8e-16  Score=121.39  Aligned_cols=164  Identities=18%  Similarity=0.215  Sum_probs=114.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccc----cccCCccchHHHHH
Q psy16220         12 AIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAV----PNYNSVVDGDKIVQ   84 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~   84 (223)
                      +|||||+|.||.+++++|++.+ ..++++++         ++..+..+.+++.+...  .+.    ....|..+.+.+ +
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~---------~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l-~   70 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDR---------DENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERL-N   70 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES----------HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHH-H
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCC---------ChhHHHHHHHHHhhcccccCcccccCceeecccCHHHH-H
Confidence            6999999999999999999987 57999987         78888888888764332  122    224455444442 2


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.++ .++|+++|.|+.=+. ++.+   +...+.+++|+.|+.++++++.    +.+..++|++|+--+..|   ...|
T Consensus        71 ~~~~~-~~pdiVfHaAA~KhV-pl~E---~~p~eav~tNv~GT~nv~~aa~----~~~v~~~v~ISTDKAv~P---tnvm  138 (293)
T PF02719_consen   71 RIFEE-YKPDIVFHAAALKHV-PLME---DNPFEAVKTNVLGTQNVAEAAI----EHGVERFVFISTDKAVNP---TNVM  138 (293)
T ss_dssp             HHTT---T-SEEEE------H-HHHC---CCHHHHHHHHCHHHHHHHHHHH----HTT-SEEEEEEECGCSS-----SHH
T ss_pred             HHHhh-cCCCEEEEChhcCCC-ChHH---hCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEccccccCCC---CcHH
Confidence            23332 289999999996432 1222   3457789999999999999984    445579999999887765   5889


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +++|...+.++.+.+......+.++.+|.=|.|
T Consensus       139 GatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNV  171 (293)
T PF02719_consen  139 GATKRLAEKLVQAANQYSGNSDTKFSSVRFGNV  171 (293)
T ss_dssp             HHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EE
T ss_pred             HHHHHHHHHHHHHHhhhCCCCCcEEEEEEecce
Confidence            999999999999999998777889999998887

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.66  E-value=3.2e-15  Score=121.83  Aligned_cols=163  Identities=17%  Similarity=0.126  Sum_probs=111.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++|||||+|+||++++++|+++|++|+++++....     ....    ......  ....+..|+.+..+++++++.   
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNG-----SPEA----LKRGERITRVTFVEGDLRDRELLDRLFEE---   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCcc-----chhh----hhhhccccceEEEECCCCCHHHHHHHHHh---
Confidence            47999999999999999999999999887652111     1111    111111  111233466655555554442   


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----------  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  158 (223)
                        +++|++||+||.....+    +.++..+.++.|+.++..+++.+    .+.+.+++|++||...+...          
T Consensus        69 --~~~d~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~  138 (328)
T TIGR01179        69 --HKIDAVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSP  138 (328)
T ss_pred             --CCCcEEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCC
Confidence              47999999999653321    22345577899999999998875    44445689999985433211          


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .+...|+.+|++++.+++.++.+  ..++++..+.|+.+
T Consensus       139 ~~~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v  176 (328)
T TIGR01179       139 LGPINPYGRSKLMSERILRDLSKA--DPGLSYVILRYFNV  176 (328)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHh--ccCCCEEEEecCcc
Confidence             13467999999999999999765  24788999999877

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG4022|consensus

Probab=99.65  E-value=6.9e-15  Score=104.65  Aligned_cols=185  Identities=17%  Similarity=0.213  Sum_probs=140.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccC--CccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYN--SVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   86 (223)
                      -.+++|-||-+.+|.+++.+|.+++|.|.-+|....+.                  ....+..+..  =.++.+.+++++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------------Ad~sI~V~~~~swtEQe~~v~~~v   64 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------------ADSSILVDGNKSWTEQEQSVLEQV   64 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------------ccceEEecCCcchhHHHHHHHHHH
Confidence            35789999999999999999999999999887632211                  0111222211  122344556666


Q ss_pred             HHhc--CCccEEEeccCCCCCCCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         87 LENF--GRIDIVINNAGILRDKSFA-RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      -+.+  .++|.++|.||.+..+... ..-..+.+.|+...+.....-.+....+++..  |-+-+.+..++.-+.|++..
T Consensus        65 g~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G--GLL~LtGAkaAl~gTPgMIG  142 (236)
T KOG4022|consen   65 GSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG--GLLQLTGAKAALGGTPGMIG  142 (236)
T ss_pred             HHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC--ceeeecccccccCCCCcccc
Confidence            5544  3799999999988654432 23345567788888888888888888887775  66777777888889999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccccCCCCCCcCCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTEDILPPGSYPVK  213 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~~~~~~~~~~~  213 (223)
                      |+++|+|++.++++|+.+-.  |.|-.+.+|.|-.. |+|+++++|+.++..|
T Consensus       143 YGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssW  195 (236)
T KOG4022|consen  143 YGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSW  195 (236)
T ss_pred             hhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCc
Confidence            99999999999999998864  67889999999988 9999999999888655

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.65  E-value=2.9e-15  Score=122.28  Aligned_cols=154  Identities=19%  Similarity=0.137  Sum_probs=109.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||+.+++.|+++|++|++++|+....         ..    +.. ....+..|+.|..++++++      
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~----~~~~~~~~~~~D~~~~~~l~~~~------   62 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR---------RN----LEGLDVEIVEGDLRDPASLRKAV------   62 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc---------cc----cccCCceEEEeeCCCHHHHHHHH------
Confidence            699999999999999999999999999998843221         10    111 1122344555554333322      


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----------  159 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  159 (223)
                       ..+|++||+|+....      ..++++..+++|+.++..+++.+.    +.+.+++|++||...+.+.+          
T Consensus        63 -~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~  131 (328)
T TIGR03466        63 -AGCRALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTP  131 (328)
T ss_pred             -hCCCEEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCC
Confidence             358999999985321      123457789999999999999873    34457999999965543211          


Q ss_pred             -----CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 -----GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 -----~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           ....|+.+|.+.+.+++.++.+   .++.+..+.|+.+
T Consensus       132 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~  171 (328)
T TIGR03466       132 SSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTP  171 (328)
T ss_pred             CCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCcc
Confidence                 1347999999999999988765   4789999999887

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.65  E-value=4.2e-15  Score=122.79  Aligned_cols=167  Identities=14%  Similarity=0.039  Sum_probs=110.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEE-EEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVV-VNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv-~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++|||||+|+||.+++++|+++|++++ .+++....       ...+... .+..  ....+..|++|..++.+++++  
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA-------GNLESLA-DVSDSERYVFEHADICDRAELDRIFAQ--   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCcc-------chHHHHH-hcccCCceEEEEecCCCHHHHHHHHHh--
Confidence            699999999999999999999998644 44431100       0111111 1111  111234566666655555543  


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCcEEEEecCccccc-----
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-----NYGRLVMTASNSGLLG-----  157 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~vsS~~~~~~-----  157 (223)
                         .++|+|||+|+.....    ...+..+..+++|+.++.++++.+.+++...     +..++|++||...+-.     
T Consensus        72 ---~~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  144 (352)
T PRK10084         72 ---HQPDAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPD  144 (352)
T ss_pred             ---cCCCEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccc
Confidence               3799999999964321    1123346789999999999999998765321     2248999999643221     


Q ss_pred             ----------------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ----------------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ----------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                      ..+...|+.+|.+.+.+++.++.++   |+.+..+.|+.+
T Consensus       145 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v  197 (352)
T PRK10084        145 EVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNN  197 (352)
T ss_pred             cccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccce
Confidence                            1234689999999999999998774   566777777766

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.64  E-value=3.9e-15  Score=119.01  Aligned_cols=168  Identities=20%  Similarity=0.122  Sum_probs=116.4

Q ss_pred             EEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         13 IVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        13 lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      |||||+|.||++++++|+++|  +.|.++++....        ........+.. ...+..|++|.+++..++       
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~--------~~~~~~~~~~~-~~~~~~Di~d~~~l~~a~-------   64 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPP--------KFLKDLQKSGV-KEYIQGDITDPESLEEAL-------   64 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccc--------ccchhhhcccc-eeEEEeccccHHHHHHHh-------
Confidence            699999999999999999999  788888763221        01011111110 003455666665554443       


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---C---------
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG---N---------  158 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~---~---------  158 (223)
                      ...|+|||+|+......     ....+.++++|+.|+.++++++    ++.+..++|++||.....+   .         
T Consensus        65 ~g~d~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~  135 (280)
T PF01073_consen   65 EGVDVVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVFDNYKGDPIINGDED  135 (280)
T ss_pred             cCCceEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeEeccCCCCcccCCcC
Confidence            36899999999654321     3456889999999999999998    4456679999999876554   1         


Q ss_pred             -----CCCchhhhhHHHHHHHHHHHHh-hhC-CCCeEEEEEeCCCcccccccCC
Q psy16220        159 -----FGQANYSAAKMALVGLSNTLSI-EGE-KNNIHCNVIVPTAASRLTEDIL  205 (223)
Q Consensus       159 -----~~~~~y~~sK~a~~~~~~~l~~-e~~-~~~i~v~~v~Pg~vt~~~~~~~  205 (223)
                           .....|+.||+..+.++..... ++. ...++..+|.|..|....+...
T Consensus       136 ~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~  189 (280)
T PF01073_consen  136 TPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRL  189 (280)
T ss_pred             CcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccc
Confidence                 1345799999999999877654 222 1258999999999855544433

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.62  E-value=1.7e-14  Score=117.07  Aligned_cols=156  Identities=12%  Similarity=0.118  Sum_probs=106.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH--h
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE--N   89 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   89 (223)
                      +|||||+|.||++++++|+++|++++++.|+...         ... ...+      ...|..|..+.+.+++.+.+  .
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~---------~~~-~~~~------~~~~~~d~~~~~~~~~~~~~~~~   65 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD---------GTK-FVNL------VDLDIADYMDKEDFLAQIMAGDD   65 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCc---------chH-HHhh------hhhhhhhhhhHHHHHHHHhcccc
Confidence            7999999999999999999999976665442111         000 0011      12344454445555554432  3


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------C
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------N  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  158 (223)
                      ++++|+|||+|+.....   ..+   -+.+++.|+.++.++++.+    ++.+ .++|++||...+-.           .
T Consensus        66 ~~~~d~Vih~A~~~~~~---~~~---~~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~  134 (308)
T PRK11150         66 FGDIEAIFHEGACSSTT---EWD---GKYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTDDFIEEREYE  134 (308)
T ss_pred             cCCccEEEECceecCCc---CCC---hHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchHHhCcCCCCCCccCCCC
Confidence            46899999999864322   111   2357899999999999987    3333 47999999653221           1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+...|+.+|.+.+.+++.++.+   .++.+..+.|+.+
T Consensus       135 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v  170 (308)
T PRK11150        135 KPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNV  170 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeee
Confidence            23467999999999998887655   4788999999887

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.61  E-value=1.9e-14  Score=112.02  Aligned_cols=159  Identities=19%  Similarity=0.219  Sum_probs=114.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFG   91 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (223)
                      ||||||+|.||.+++++|+++|+.|+.+.|...+       ....    ...........|..|.++.+++++..     
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~-------~~~~----~~~~~~~~~~~dl~~~~~~~~~~~~~-----   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNS-------ESFE----EKKLNVEFVIGDLTDKEQLEKLLEKA-----   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTG-------GHHH----HHHTTEEEEESETTSHHHHHHHHHHH-----
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccc-------cccc----cccceEEEEEeecccccccccccccc-----
Confidence            7999999999999999999999998887763221       1111    11112233445666666555555543     


Q ss_pred             CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------CC
Q psy16220         92 RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------FG  160 (223)
Q Consensus        92 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------~~  160 (223)
                      .+|.+||+|+...    ...+.+.....++.|+.++.++++.+    .+.+..++|++||...+...           ..
T Consensus        65 ~~d~vi~~a~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~  136 (236)
T PF01370_consen   65 NIDVVIHLAAFSS----NPESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINP  136 (236)
T ss_dssp             TESEEEEEBSSSS----HHHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCH
T ss_pred             CceEEEEeecccc----cccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccc
Confidence            8999999999643    11222556778889999999988887    55444699999995432221           13


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ...|+.+|...+.+++.+..+.   ++++.++.|+.+
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~v  170 (236)
T PF01370_consen  137 LSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNV  170 (236)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEE
T ss_pred             cccccccccccccccccccccc---cccccccccccc
Confidence            4569999999999999998874   899999999998

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.60  E-value=2e-14  Score=120.18  Aligned_cols=162  Identities=16%  Similarity=0.100  Sum_probs=103.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHH----HHHhCCccccccCCccchHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAE----IRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      +.+++|||||+|.||++++++|+++ |++|++++|.         ......+...    .......+..|+.|..+++++
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~---------~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   83 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY---------NDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGL   83 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC---------chhhhhhhccccccCCCCeEEEEcCCCChHHHHHH
Confidence            3458999999999999999999998 5999998763         1111111100    000111122344443333222


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----  158 (223)
                      +       ..+|+|||+|+........    .+-.+.+..|+.++.++++++.    +.+ .++|++||...+-..    
T Consensus        84 ~-------~~~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~vYg~~~~~~  147 (386)
T PLN02427         84 I-------KMADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSF  147 (386)
T ss_pred             h-------hcCCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeeeeeCCCcCCC
Confidence            2       2489999999965432111    1122446689999999988763    333 589999996432110    


Q ss_pred             -----C------------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -----F------------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -----~------------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           |                        ....|+.+|.+.+.+++.++..   .|+.+..+.|+.|
T Consensus       148 ~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~v  212 (386)
T PLN02427        148 LPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNW  212 (386)
T ss_pred             CCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccce
Confidence                 0                        1236999999999999877644   5899999999988

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.60  E-value=2.8e-14  Score=110.97  Aligned_cols=164  Identities=15%  Similarity=0.082  Sum_probs=114.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +++|||||.|.||.++++.++++.  .+|+.+|.-.-    +.+.+.+    ..+..  +..-++.|++|...+..+++ 
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY----Agn~~~l----~~~~~~~~~~fv~~DI~D~~~v~~~~~-   71 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY----AGNLENL----ADVEDSPRYRFVQGDICDRELVDRLFK-   71 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc----cCCHHHH----HhhhcCCCceEEeccccCHHHHHHHHH-
Confidence            368999999999999999999875  34677764221    1122222    22222  23334557776554444443 


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc--c-------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL--L-------  156 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~--~-------  156 (223)
                         ++ ++|+++|-|+-++    -+-+..+-+..+++|+.|++.|++++..+...   -|++.||.-..+  .       
T Consensus        72 ---~~-~~D~VvhfAAESH----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~F  140 (340)
T COG1088          72 ---EY-QPDAVVHFAAESH----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAF  140 (340)
T ss_pred             ---hc-CCCeEEEechhcc----ccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCc
Confidence               32 7999999999544    33455666788999999999999998666543   389999973321  1       


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCC
Q psy16220        157 ----GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTA  196 (223)
Q Consensus       157 ----~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~  196 (223)
                          +..+.++|++|||+.+.|++++...+   |+.+....++.
T Consensus       141 tE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSN  181 (340)
T COG1088         141 TETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSN  181 (340)
T ss_pred             ccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCC
Confidence                33467999999999999999999985   67777766654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.59  E-value=2.1e-13  Score=108.04  Aligned_cols=180  Identities=19%  Similarity=0.142  Sum_probs=140.3

Q ss_pred             CcEEEEEcC-CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGA-GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa-~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ..+|||.|. +..|++.+|..|-++|+-|.+++.         +.++.....++-.........|..+..++...+.++.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~---------~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~   73 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVS---------SAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFA   73 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeC---------CHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHH
Confidence            458999996 899999999999999999999864         3333333222222222223345555666776666665


Q ss_pred             HhcC--------------CccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCCcEEEEe
Q psy16220         88 ENFG--------------RIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ--NYGRLVMTA  150 (223)
Q Consensus        88 ~~~~--------------~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~vs  150 (223)
                      ..+.              .+..||...... ..+|++.++.+.|.++++.|+..++.+++.++|+++.+  ++.+||++.
T Consensus        74 ~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~  153 (299)
T PF08643_consen   74 SLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFN  153 (299)
T ss_pred             HHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEe
Confidence            5443              366777776644 45899999999999999999999999999999999982  235666665


Q ss_pred             -cCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        151 -SNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       151 -S~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       |.......|.+++-.+...++.+|+++|+.|+.+.+|.|..+..|.+
T Consensus       154 Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l  201 (299)
T PF08643_consen  154 PSISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNL  201 (299)
T ss_pred             CchhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeee
Confidence             77788899999999999999999999999999999999999999987

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.57  E-value=8.8e-14  Score=115.02  Aligned_cols=163  Identities=17%  Similarity=0.130  Sum_probs=107.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--------Ccc---ccccCCcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--------GKA---VPNYNSVV   77 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~   77 (223)
                      ++|||||+|+||++++++|+++|  ++|+++.|...      .....+.+.+.+....        ..+   ..|+.+..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   74 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS------EEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPR   74 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC------HHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCccc
Confidence            48999999999999999999999  77999887321      1111222222222211        112   22433321


Q ss_pred             c--hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         78 D--GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        78 ~--~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      -  .+..+..+   ...+|++||||+.....       ..++...++|+.++..+++.+    .+.+..+++++||....
T Consensus        75 ~gl~~~~~~~~---~~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a----~~~~~~~~v~iSS~~v~  140 (367)
T TIGR01746        75 LGLSDAEWERL---AENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLA----ASGRAKPLHYVSTISVL  140 (367)
T ss_pred             CCcCHHHHHHH---HhhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHH----hhCCCceEEEEcccccc
Confidence            0  01222222   24799999999965321       235677889999999998876    33444569999997665


Q ss_pred             ccC----------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        156 LGN----------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       156 ~~~----------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ...                .....|+.+|.+.+.+++..+.    .|++++.+.||.+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v  194 (367)
T TIGR01746       141 AAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRI  194 (367)
T ss_pred             CCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCce
Confidence            331                1134699999999998876553    3899999999999

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.57  E-value=1.7e-13  Score=113.93  Aligned_cols=162  Identities=17%  Similarity=0.128  Sum_probs=109.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      -++|++|||||+|.||+++++.|.++|++|++++|....        ...    ...........|+.|..+...+    
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~--------~~~----~~~~~~~~~~~Dl~d~~~~~~~----   82 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNE--------HMS----EDMFCHEFHLVDLRVMENCLKV----   82 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccc--------ccc----cccccceEEECCCCCHHHHHHH----
Confidence            367899999999999999999999999999999873211        000    0000011222344443322221    


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc----------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL----------  156 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~----------  156 (223)
                         +.++|+|||+|+.........   .+....+..|+.++.++++++    ++.+..++|++||...+-          
T Consensus        83 ---~~~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~  152 (370)
T PLN02695         83 ---TKGVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVS  152 (370)
T ss_pred             ---HhCCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCC
Confidence               235899999998653221111   122345678999999999986    444446999999964221          


Q ss_pred             -------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 -------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 -------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                             +..+...|+.+|.+.+.+++.++..   .|+.+..+.|+.+
T Consensus       153 ~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~v  197 (370)
T PLN02695        153 LKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNI  197 (370)
T ss_pred             cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCc
Confidence                   2234568999999999999987765   4899999999988

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.55  E-value=1.7e-13  Score=111.36  Aligned_cols=157  Identities=13%  Similarity=0.127  Sum_probs=103.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH-h
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE-N   89 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   89 (223)
                      +|||||+|.||.++++.|.++|+ .|++++|...       .....    ++..   .   ...++.+....++.+.+ .
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~-------~~~~~----~~~~---~---~~~~d~~~~~~~~~~~~~~   63 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRD-------GHKFL----NLAD---L---VIADYIDKEDFLDRLEKGA   63 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCC-------chhhh----hhhh---e---eeeccCcchhHHHHHHhhc
Confidence            58999999999999999999998 6877765321       11111    1111   1   11122222333444433 3


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------C
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------N  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  158 (223)
                      +.++|+|||+|+....      +.++.+..+++|+.++.++++.+.    +.+ .++|++||...+-.           .
T Consensus        64 ~~~~D~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~  132 (314)
T TIGR02197        64 FGKIEAIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELE  132 (314)
T ss_pred             cCCCCEEEECccccCc------cccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcC
Confidence            5689999999996432      223557788999999999999873    333 48999999653321           1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+...|+.+|.+++.+++....+. ..++.+..+.|+.+
T Consensus       133 ~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~v  170 (314)
T TIGR02197       133 RPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNV  170 (314)
T ss_pred             CCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeec
Confidence            245689999999999998644332 23567888888877

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.54  E-value=1.5e-13  Score=111.48  Aligned_cols=158  Identities=20%  Similarity=0.156  Sum_probs=107.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      .+|||||+|.||.+++++|+++|++|+.++|......         ...    .....+..|..+.    ...++..+..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~----~~~~~~~~d~~~~----~~~~~~~~~~   64 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD---------PLL----SGVEFVVLDLTDR----DLVDELAKGV   64 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc---------ccc----cccceeeecccch----HHHHHHHhcC
Confidence            3999999999999999999999999999988433211         000    1111223333333    2222222221


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------C
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------F  159 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------~  159 (223)
                      .  |++||+|+........ . . +....+++|+.++.++++++    ++.+..++|+.||.....+.           +
T Consensus        65 ~--d~vih~aa~~~~~~~~-~-~-~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~  135 (314)
T COG0451          65 P--DAVIHLAAQSSVPDSN-A-S-DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGP  135 (314)
T ss_pred             C--CEEEEccccCchhhhh-h-h-CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceECCCCCCCCcccccCC
Confidence            2  9999999975532111 1 1 45678999999999999998    43455789997665533321           1


Q ss_pred             --CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 --GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 --~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        ....|+.+|.+.+.+++....   ..|+.+..+.|+.+
T Consensus       136 ~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v  172 (314)
T COG0451         136 PRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNV  172 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeee
Confidence              112599999999999999988   46899999999977

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.53  E-value=1.5e-13  Score=116.46  Aligned_cols=161  Identities=16%  Similarity=0.109  Sum_probs=106.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   83 (223)
                      +..+++++|||||+|.||++++++|+++|++|+++++....     .   .+.....+..... .+..|+.+     .. 
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~-----~---~~~~~~~~~~~~~~~i~~D~~~-----~~-  180 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTG-----R---KENVMHHFSNPNFELIRHDVVE-----PI-  180 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCcc-----c---hhhhhhhccCCceEEEECCccC-----hh-
Confidence            45577899999999999999999999999999998763211     0   0111111110000 01112211     11 


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-------
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-------  156 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-------  156 (223)
                            ...+|+|||+|+.......    ..+..+.+++|+.++.++++++    ++.+ .++|++||...+.       
T Consensus       181 ------l~~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa----~~~g-~r~V~~SS~~VYg~~~~~p~  245 (442)
T PLN02206        181 ------LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQ  245 (442)
T ss_pred             ------hcCCCEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHH----HHhC-CEEEEECChHHhCCCCCCCC
Confidence                  1258999999986543211    1234578899999999999987    3333 4899999975432       


Q ss_pred             ---------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 ---------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ---------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                               +......|+.+|.+.+.+++.+..+   .++.+..+.|+.+
T Consensus       246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~v  292 (442)
T PLN02206        246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNT  292 (442)
T ss_pred             CccccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccc
Confidence                     1112467999999999999887655   4788888888766

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.53  E-value=2.5e-13  Score=109.05  Aligned_cols=139  Identities=20%  Similarity=0.185  Sum_probs=100.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|.||.+++++|+++|++|++++|         .                  ..|+.+.+++++.++.     
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r---------~------------------~~d~~~~~~~~~~~~~-----   48 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTS---------S------------------QLDLTDPEALERLLRA-----   48 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCC---------c------------------ccCCCCHHHHHHHHHh-----
Confidence            3799999999999999999999999999866         1                  2344444444444332     


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------CC
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------NF  159 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~~  159 (223)
                      .++|++||+|+.....    ......+..+++|+.++.++++.+.    +.+ .++|++||...+.+           ..
T Consensus        49 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~  119 (287)
T TIGR01214        49 IRPDAVVNTAAYTDVD----GAESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATN  119 (287)
T ss_pred             CCCCEEEECCcccccc----ccccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCC
Confidence            2689999999864321    1123356788999999999999863    333 48999998643221           11


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ....|+.+|.+.+.+++.+       +..+..+.|+.+
T Consensus       120 ~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v  150 (287)
T TIGR01214       120 PLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWL  150 (287)
T ss_pred             CcchhhHHHHHHHHHHHHh-------CCCeEEEEeeec
Confidence            3467999999999888765       346889999988

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.52  E-value=4.5e-13  Score=112.07  Aligned_cols=163  Identities=12%  Similarity=0.081  Sum_probs=108.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+++++|||||+|+||++++++|+++|++|++++|+......   .......... ......+..|+.|.+++...++..
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~---~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRG---KNGKEDTKKE-LPGAEVVFGDVTDADSLRKVLFSE  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccc---cchhhHHhhh-cCCceEEEeeCCCHHHHHHHHHHh
Confidence            457799999999999999999999999999999884321100   0000011100 111223455777766666655432


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                         .+++|+||||++.....         ....+++|+.++.++++.+    ++.+.+++|++||.....   ....|..
T Consensus       134 ---~~~~D~Vi~~aa~~~~~---------~~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~~  194 (390)
T PLN02657        134 ---GDPVDVVVSCLASRTGG---------VKDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQR  194 (390)
T ss_pred             ---CCCCcEEEECCccCCCC---------CccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHHH
Confidence               12799999998843211         1123567888888887776    455557999999986543   3456888


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +|...+...+.     ...+++...|.|+.+
T Consensus       195 sK~~~E~~l~~-----~~~gl~~tIlRp~~~  220 (390)
T PLN02657        195 AKLKFEAELQA-----LDSDFTYSIVRPTAF  220 (390)
T ss_pred             HHHHHHHHHHh-----ccCCCCEEEEccHHH
Confidence            99888877654     246899999999887

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.51  E-value=5.1e-13  Score=118.83  Aligned_cols=161  Identities=12%  Similarity=0.097  Sum_probs=108.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +++++|||||+|.||.+++++|+++ |++|+.++|...         .....   ... ....+..|+.|..   ..+++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~---------~~~~~---~~~~~~~~~~gDl~d~~---~~l~~  378 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD---------AISRF---LGHPRFHFVEGDISIHS---EWIEY  378 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch---------hhhhh---cCCCceEEEeccccCcH---HHHHH
Confidence            5789999999999999999999986 799999987321         11110   000 1111223444422   22232


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-------  158 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  158 (223)
                      ..   ..+|+|||+|+.......    .++.+..+++|+.++.++++++..    .+ .++|++||...+-..       
T Consensus       379 ~l---~~~D~ViHlAa~~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E  446 (660)
T PRK08125        379 HI---KKCDVVLPLVAIATPIEY----TRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDE  446 (660)
T ss_pred             Hh---cCCCEEEECccccCchhh----ccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCc
Confidence            22   369999999997543211    122346789999999999998743    33 589999996432100       


Q ss_pred             --------C---CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        159 --------F---GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       159 --------~---~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                              +   ....|+.||.+.+.+++.++.+   .|+++..+.|+.+.
T Consensus       447 ~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vy  494 (660)
T PRK08125        447 DTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWM  494 (660)
T ss_pred             cccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceee
Confidence                    1   1246999999999999988766   47899999999883

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.51  E-value=2.6e-13  Score=109.77  Aligned_cols=145  Identities=17%  Similarity=0.061  Sum_probs=102.0

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcCC
Q psy16220         13 IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGR   92 (223)
Q Consensus        13 lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (223)
                      |||||+|.||.++++.|++.|++|+++.+         .                 ...|+.|..+++.+++.     .+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~---------~-----------------~~~Dl~~~~~l~~~~~~-----~~   49 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT---------H-----------------KELDLTRQADVEAFFAK-----EK   49 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeec---------c-----------------ccCCCCCHHHHHHHHhc-----cC
Confidence            69999999999999999999998876532         0                 12455554444443333     25


Q ss_pred             ccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------------C
Q psy16220         93 IDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-------------F  159 (223)
Q Consensus        93 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------------~  159 (223)
                      +|+|||+|+......   ...++....+++|+.++.++++.+    ++.+..++|++||...+.+.             +
T Consensus        50 ~d~Vih~A~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~  122 (306)
T PLN02725         50 PTYVILAAAKVGGIH---ANMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGP  122 (306)
T ss_pred             CCEEEEeeeeecccc---hhhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCC
Confidence            899999999643111   011223467889999999999987    44445689999996432211             1


Q ss_pred             ---CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        160 ---GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       160 ---~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                         ....|+.+|.+.+.+++.+..+   .++++..+.|+.+-
T Consensus       123 ~~p~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vy  161 (306)
T PLN02725        123 PEPTNEWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLY  161 (306)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHH---hCCCEEEEEeccee
Confidence               1235999999999999888766   37899999999883

>KOG1371|consensus

Probab=99.50  E-value=2.3e-13  Score=107.25  Aligned_cols=156  Identities=19%  Similarity=0.191  Sum_probs=109.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc---cccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV---PNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   85 (223)
                      +++||||||+|.||.+.+.+|+++|+.|+++|--...     ....+.... .+...+..+.   .|++|...++++|+.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~-----~~~sl~r~~-~l~~~~~~v~f~~~Dl~D~~~L~kvF~~   75 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNS-----YLESLKRVR-QLLGEGKSVFFVEGDLNDAEALEKLFSE   75 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEeccccc-----chhHHHHHH-HhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence            4789999999999999999999999999999742221     122222222 2222123343   366666555565554


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---------  156 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---------  156 (223)
                      .     ++|.|+|.|+....+    .+.+.-..++..|+.++++++..+    ++.+...+|+.||...+-         
T Consensus        76 ~-----~fd~V~Hfa~~~~vg----eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te  142 (343)
T KOG1371|consen   76 V-----KFDAVMHFAALAAVG----ESMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITE  142 (343)
T ss_pred             c-----CCceEEeehhhhccc----hhhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccC
Confidence            3     599999999965433    233344789999999999999986    666667888888854322         


Q ss_pred             --cCC-CCchhhhhHHHHHHHHHHHHhhhC
Q psy16220        157 --GNF-GQANYSAAKMALVGLSNTLSIEGE  183 (223)
Q Consensus       157 --~~~-~~~~y~~sK~a~~~~~~~l~~e~~  183 (223)
                        +.. +..+|+.+|.+++..++.+..-+.
T Consensus       143 ~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  143 EDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             cCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence              122 568899999999999999988754

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.50  E-value=7.4e-13  Score=109.25  Aligned_cols=159  Identities=11%  Similarity=0.107  Sum_probs=104.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++|||||+|.||.+++++|++. |++|+.++|         +.....    .+... ..+.+...|..+....++++. 
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r---------~~~~~~----~~~~~-~~~~~~~~Dl~~~~~~~~~~~-   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDM---------QTDRLG----DLVNH-PRMHFFEGDITINKEWIEYHV-   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeC---------cHHHHH----HhccC-CCeEEEeCCCCCCHHHHHHHH-
Confidence            37999999999999999999986 799999876         222111    11111 112222233321112233332 


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----------  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  158 (223)
                        .++|+|||+|+......    ..++.+..+++|+.++.++++.+.    +.+ .++|++||...+...          
T Consensus        67 --~~~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~vyg~~~~~~~~ee~~  135 (347)
T PRK11908         67 --KKCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCPDEEFDPEAS  135 (347)
T ss_pred             --cCCCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecceeeccCCCcCcCcccc
Confidence              36899999999644321    112335678999999999988873    333 599999996432110          


Q ss_pred             --------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 --------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 --------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                              .....|+.+|.+.+.+++.++..   .++.+..+.|+.+
T Consensus       136 ~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v  179 (347)
T PRK11908        136 PLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNW  179 (347)
T ss_pred             ccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeee
Confidence                    11236999999999999988765   4778888888877

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.50  E-value=1.1e-12  Score=117.05  Aligned_cols=168  Identities=14%  Similarity=0.023  Sum_probs=109.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHH-HhCCccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+.|++|||||+|.||++++++|+++  |++|+++++....       .....+..... .....+..|+.|......+ 
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-------~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~-   75 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-------SNLKNLNPSKSSPNFKFVKGDIASADLVNYL-   75 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-------chhhhhhhcccCCCeEEEECCCCChHHHHHH-
Confidence            46789999999999999999999988  6888888762110       11111110000 0111223355444332222 


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc-----
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG-----  157 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~-----  157 (223)
                         .. ..++|+|||+|+.....    ....+....+++|+.++..+++++    ++.+ ..++|++||...+-.     
T Consensus        76 ---~~-~~~~D~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~  143 (668)
T PLN02260         76 ---LI-TEGIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDA  143 (668)
T ss_pred             ---Hh-hcCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCcccc
Confidence               21 14799999999965421    111233567899999999999886    3332 469999999643211     


Q ss_pred             ---------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ---------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ---------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                               ..+...|+.+|.+.+.+++.+..+   .++.+..+.|+.|
T Consensus       144 ~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~V  189 (668)
T PLN02260        144 DVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNV  189 (668)
T ss_pred             ccCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccc
Confidence                     113467999999999999988766   4788999999988

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.48  E-value=9.4e-13  Score=106.49  Aligned_cols=142  Identities=14%  Similarity=0.136  Sum_probs=96.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|.||++++++|+++| +|+.++|.         ..              .+..|+.|...++++++.     
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~---------~~--------------~~~~Dl~d~~~~~~~~~~-----   52 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVH---------ST--------------DYCGDFSNPEGVAETVRK-----   52 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccc---------cc--------------cccCCCCCHHHHHHHHHh-----
Confidence            69999999999999999999999 78877651         00              122355555544444332     


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------cCC
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------GNF  159 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------~~~  159 (223)
                      .++|+|||+|+......    ..++-+..+++|+.++.++++.+    ++.+ .++|++||...+-           +..
T Consensus        53 ~~~D~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa----~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~  123 (299)
T PRK09987         53 IRPDVIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAA----NEVG-AWVVHYSTDYVFPGTGDIPWQETDATA  123 (299)
T ss_pred             cCCCEEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEccceEECCCCCCCcCCCCCCC
Confidence            26899999999754321    11223566789999999999987    3333 4899999854321           112


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +...|+.+|.+.+.+++.+..+       ...+.|+.+
T Consensus       124 P~~~Yg~sK~~~E~~~~~~~~~-------~~ilR~~~v  154 (299)
T PRK09987        124 PLNVYGETKLAGEKALQEHCAK-------HLIFRTSWV  154 (299)
T ss_pred             CCCHHHHHHHHHHHHHHHhCCC-------EEEEeccee
Confidence            3467999999999998765432       255555555

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.48  E-value=1e-12  Score=111.27  Aligned_cols=159  Identities=13%  Similarity=0.071  Sum_probs=104.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +.+++|||||+|.||++++++|+++|++|++++|....     .....    ..+... ..+.....|..  +.    . 
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~-----~~~~~----~~~~~~-~~~~~~~~Di~--~~----~-  181 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTG-----RKENL----VHLFGN-PRFELIRHDVV--EP----I-  181 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCc-----cHhHh----hhhccC-CceEEEECccc--cc----c-
Confidence            45689999999999999999999999999999873211     01111    111100 01111111111  11    1 


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------  156 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------  156 (223)
                        ..++|+|||+|+....... .   .+-...+++|+.++.++++.+.    +.+ .++|++||...+-           
T Consensus       182 --~~~~D~ViHlAa~~~~~~~-~---~~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~  250 (436)
T PLN02166        182 --LLEVDQIYHLACPASPVHY-K---YNPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETY  250 (436)
T ss_pred             --ccCCCEEEECceeccchhh-c---cCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccc
Confidence              2368999999986433211 1   1235789999999999999873    333 4899999865321           


Q ss_pred             -----cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 -----GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 -----~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           +......|+.+|.+.+.+++.+...   .++.+..+.|+.+
T Consensus       251 ~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~v  293 (436)
T PLN02166        251 WGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNT  293 (436)
T ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccc
Confidence                 1112456999999999999988765   4788888888877

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.40  E-value=8e-12  Score=111.36  Aligned_cols=159  Identities=18%  Similarity=0.103  Sum_probs=104.8

Q ss_pred             EEEEEcCCCchHHHHHHHHH--HcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH-HhCCccccccCCccc--hHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLA--ERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPNYNSVVD--GDKIVQT   85 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~--~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~   85 (223)
                      ++|||||+|.||.+++++|+  ++|++|++++|+.       ............. .....+..|+.|...  ....++.
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~-------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   74 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQ-------SLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE   74 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcc-------hHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH
Confidence            69999999999999999999  5899999998721       1112222211110 111122335554321  1222333


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--------  157 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--------  157 (223)
                      +    .++|+|||+|+.....       .......++|+.++.++++.+    .+.+..++|++||......        
T Consensus        75 l----~~~D~Vih~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~  139 (657)
T PRK07201         75 L----GDIDHVVHLAAIYDLT-------ADEEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFRED  139 (657)
T ss_pred             h----cCCCEEEECceeecCC-------CCHHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccc
Confidence            2    5799999999964321       123556789999999998886    4444579999999654321        


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 -----NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 -----~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           ......|+.+|...+.+.+.      ..|+.+..+.|+.+
T Consensus       140 ~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v  178 (657)
T PRK07201        140 DFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVV  178 (657)
T ss_pred             cchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCee
Confidence                 11235699999999988763      24789999999998

>PLN02778 3,5-epimerase/4-reductase

Probab=99.38  E-value=1.7e-11  Score=99.08  Aligned_cols=132  Identities=14%  Similarity=0.124  Sum_probs=86.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ..+++|||||+|.||.++++.|+++|++|++..+         +                     ..|...+...++   
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~---------~---------------------~~~~~~v~~~l~---   54 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG---------R---------------------LENRASLEADID---   54 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC---------c---------------------cCCHHHHHHHHH---
Confidence            3578999999999999999999999999875321         1                     011111111111   


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc------------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL------------  155 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~------------  155 (223)
                       . .++|+|||+||....... +...++-...+++|+.++.++++.+.    +.+. +.+++||.+.+            
T Consensus        55 -~-~~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~  126 (298)
T PLN02778         55 -A-VKPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGI  126 (298)
T ss_pred             -h-cCCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCC
Confidence             1 268999999997643211 12223456789999999999999983    3332 44555543211            


Q ss_pred             -c-----cCCCCchhhhhHHHHHHHHHHHHh
Q psy16220        156 -L-----GNFGQANYSAAKMALVGLSNTLSI  180 (223)
Q Consensus       156 -~-----~~~~~~~y~~sK~a~~~~~~~l~~  180 (223)
                       .     +.+....|+.+|.+.+.+++.++.
T Consensus       127 ~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~  157 (298)
T PLN02778        127 GFKEEDTPNFTGSFYSKTKAMVEELLKNYEN  157 (298)
T ss_pred             CCCcCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence             0     111236799999999999988753

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.37  E-value=1.4e-11  Score=100.48  Aligned_cols=145  Identities=14%  Similarity=0.118  Sum_probs=96.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-CccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-GKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +++||||+|.||++++++|+++|++|++++|+         .....    .+...+ ..+..|+.|..+...       .
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~---------~~~~~----~l~~~~v~~v~~Dl~d~~~l~~-------a   61 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRN---------LRKAS----FLKEWGAELVYGDLSLPETLPP-------S   61 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC---------hHHhh----hHhhcCCEEEECCCCCHHHHHH-------H
Confidence            69999999999999999999999999999873         22211    111112 122335554433322       2


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                      +..+|+|||+++....         +.....++|+.++.++++++    ++.+..++|++||..+..  .+...|..+|.
T Consensus        62 l~g~d~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~--~~~~~~~~~K~  126 (317)
T CHL00194         62 FKGVTAIIDASTSRPS---------DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ--YPYIPLMKLKS  126 (317)
T ss_pred             HCCCCEEEECCCCCCC---------CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc--cCCChHHHHHH
Confidence            3468999998763211         12345668888888888876    555556999999864321  12356888888


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..+.+.+       ..++....+.|+.+
T Consensus       127 ~~e~~l~-------~~~l~~tilRp~~~  147 (317)
T CHL00194        127 DIEQKLK-------KSGIPYTIFRLAGF  147 (317)
T ss_pred             HHHHHHH-------HcCCCeEEEeecHH
Confidence            8776653       24788899999865

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.37  E-value=1.2e-11  Score=97.42  Aligned_cols=162  Identities=15%  Similarity=0.104  Sum_probs=92.5

Q ss_pred             EEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHH-------------HHhCCccccccCCccc
Q psy16220         14 VTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEI-------------RSKGGKAVPNYNSVVD   78 (223)
Q Consensus        14 ItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~   78 (223)
                      ||||||.||..+..+|++++.  +|+++.|...      .....+.+.+.+             .++...+..|+++..=
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~------~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~l   74 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASS------SQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNL   74 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSS------HHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcc------cccchhhhhhhcccccchhhhhhhhhccEEEEecccccccc
Confidence            799999999999999999876  8999988321      111222221111             1122222334444321


Q ss_pred             --hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-
Q psy16220         79 --GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-  155 (223)
Q Consensus        79 --~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-  155 (223)
                        -+..++++.+   .+|++||||+......       .+++..++|+.|+..+++.+    ...+..+++++||.... 
T Consensus        75 GL~~~~~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la----~~~~~~~~~~iSTa~v~~  140 (249)
T PF07993_consen   75 GLSDEDYQELAE---EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLA----AQGKRKRFHYISTAYVAG  140 (249)
T ss_dssp             G--HHHHHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHH----TSSS---EEEEEEGGGTT
T ss_pred             CCChHHhhcccc---ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHH----HhccCcceEEeccccccC
Confidence              1233444443   4999999999765421       34557889999999999987    33433599999993211 


Q ss_pred             -cc------------------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        156 -LG------------------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       156 -~~------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                       ..                  ......|..||+..+.+.+..+.+   .|+.+..+.||.|.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~  199 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIV  199 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccc
Confidence             11                  012357999999999999988876   47889999999993

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02996 fatty acyl-CoA reductase

Probab=99.36  E-value=3.2e-11  Score=103.64  Aligned_cols=172  Identities=15%  Similarity=0.114  Sum_probs=107.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEccCCCCCCCCCChhhhh-HH-----HHHHHH------------h
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERG---ASVVVNDLGGQRDGDGKSSKAAD-TV-----VAEIRS------------K   65 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G---~~vv~~~r~~~~~~~~~~~~~~~-~~-----~~~~~~------------~   65 (223)
                      ++||++|||||||.||..++.+|++.+   .+|+++.|......   ...++. +.     .+.+.+            +
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~---~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~k   85 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKS---ATQRLHDEVIGKDLFKVLREKLGENLNSLISEK   85 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCC---HHHHHHHHHhhchHHHHHHHhcchhhhhhhhcC
Confidence            689999999999999999999999764   35788877433211   111111 11     111111            1


Q ss_pred             CCccccccCCcc---chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC
Q psy16220         66 GGKAVPNYNSVV---DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN  142 (223)
Q Consensus        66 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  142 (223)
                      ...+..|+++..   +....++.+.   ..+|+|||+|+.....       ++.+..+++|+.++.++++.+...   .+
T Consensus        86 v~~i~GDl~~~~LGLs~~~~~~~l~---~~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~  152 (491)
T PLN02996         86 VTPVPGDISYDDLGVKDSNLREEMW---KEIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---VK  152 (491)
T ss_pred             EEEEecccCCcCCCCChHHHHHHHH---hCCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---CC
Confidence            111222443211   0112233333   2599999999965421       246778999999999999987321   23


Q ss_pred             CCcEEEEecCcccccCC--------------------------------------------------------------C
Q psy16220        143 YGRLVMTASNSGLLGNF--------------------------------------------------------------G  160 (223)
Q Consensus       143 ~g~iv~vsS~~~~~~~~--------------------------------------------------------------~  160 (223)
                      ..++|++||....-...                                                              .
T Consensus       153 ~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (491)
T PLN02996        153 VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGW  232 (491)
T ss_pred             CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCC
Confidence            35899999865431100                                                              1


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASR  199 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~  199 (223)
                      ...|+.||+..+.+++..+     .++.+..+.|+.|..
T Consensus       233 pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G  266 (491)
T PLN02996        233 PNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITS  266 (491)
T ss_pred             CCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEecc
Confidence            1349999999999997653     379999999999943

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.30  E-value=2.3e-11  Score=97.68  Aligned_cols=139  Identities=18%  Similarity=0.196  Sum_probs=93.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++||||++|.||.++++.|.++|+.++.++|         .                  ..|+.|.+.+.+.+++.    
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r---------~------------------~~dl~d~~~~~~~~~~~----   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSR---------S------------------DLDLTDPEAVAKLLEAF----   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEEST---------T------------------CS-TTSHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCc---------h------------------hcCCCCHHHHHHHHHHh----
Confidence            7999999999999999999999999998865         1                  34555555555555443    


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------C
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------F  159 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------~  159 (223)
                       ++|+|||+||.....    .-.++-+..+.+|+.++..+++.+    .+. ..++|++||...+-|.           .
T Consensus        51 -~pd~Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~  120 (286)
T PF04321_consen   51 -KPDVVINCAAYTNVD----ACEKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPN  120 (286)
T ss_dssp             ---SEEEE------HH----HHHHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS---
T ss_pred             -CCCeEeccceeecHH----hhhhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCC
Confidence             699999999964321    112335678999999999999987    333 3699999997544332           2


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +...|+-+|...+...+...    +   +...+.++.+
T Consensus       121 P~~~YG~~K~~~E~~v~~~~----~---~~~IlR~~~~  151 (286)
T PF04321_consen  121 PLNVYGRSKLEGEQAVRAAC----P---NALILRTSWV  151 (286)
T ss_dssp             -SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SE
T ss_pred             CCCHHHHHHHHHHHHHHHhc----C---CEEEEeccee
Confidence            45789999999998887722    2   4566666766

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK05865 hypothetical protein; Provisional

Probab=99.29  E-value=4.9e-11  Score=107.23  Aligned_cols=127  Identities=18%  Similarity=0.188  Sum_probs=90.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      +++||||+|+||++++++|+++|++|++++|+..         ..      .......+..|+.|..++.++++      
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~---------~~------~~~~v~~v~gDL~D~~~l~~al~------   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRP---------DS------WPSSADFIAADIRDATAVESAMT------   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCch---------hh------cccCceEEEeeCCCHHHHHHHHh------
Confidence            6999999999999999999999999999987311         00      00111233446665554444332      


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHHH
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMA  170 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~a  170 (223)
                       .+|+|||+|+....             .+++|+.++.++++.+    .+.+.++||++||..              |.+
T Consensus        61 -~vD~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~a  108 (854)
T PRK05865         61 -GADVVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPR  108 (854)
T ss_pred             -CCCEEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHH
Confidence             58999999975321             4678999998887765    555557999999953              777


Q ss_pred             HHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        171 LVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       171 ~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+.+++    +   .++.+..+.|+.+
T Consensus       109 aE~ll~----~---~gl~~vILRp~~V  128 (854)
T PRK05865        109 VEQMLA----D---CGLEWVAVRCALI  128 (854)
T ss_pred             HHHHHH----H---cCCCEEEEEeceE
Confidence            776663    2   4788999999987

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.25  E-value=2.3e-11  Score=94.26  Aligned_cols=101  Identities=14%  Similarity=0.103  Sum_probs=76.3

Q ss_pred             EEEEEcC-CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGA-GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa-~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +=.||.. +||||+++|+.|+++|++|+++++..          ..       .. .....+|+.+..+.+.+++.+.+.
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~----------~l-------~~-~~~~~~Dv~d~~s~~~l~~~v~~~   77 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR----------AL-------KP-EPHPNLSIREIETTKDLLITLKEL   77 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh----------hc-------cc-ccCCcceeecHHHHHHHHHHHHHH
Confidence            4455555 67999999999999999999986410          00       00 001346788888888999999999


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSR  132 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  132 (223)
                      ++++|+||||||.....++.+.+.++|++++.   .+.+.+.+
T Consensus        78 ~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        78 VQEHDILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             cCCCCEEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            99999999999987778888999999997744   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.25  E-value=3e-10  Score=85.12  Aligned_cols=137  Identities=21%  Similarity=0.193  Sum_probs=91.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFG   91 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (223)
                      |+|+||+|.+|+.++++|+++|++|+++.|         +..+.+.        ...+.....|..+.+.    +.+.+.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R---------~~~~~~~--------~~~~~~~~~d~~d~~~----~~~al~   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVR---------SPSKAED--------SPGVEIIQGDLFDPDS----VKAALK   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEES---------SGGGHHH--------CTTEEEEESCTTCHHH----HHHHHT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEec---------Cchhccc--------ccccccceeeehhhhh----hhhhhh
Confidence            689999999999999999999999999988         4444333        2223333333343333    223334


Q ss_pred             CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC---------c
Q psy16220         92 RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ---------A  162 (223)
Q Consensus        92 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~---------~  162 (223)
                      +.|++|++++....         +            ...++.++..+++.+..++|++|+.......+..         .
T Consensus        60 ~~d~vi~~~~~~~~---------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~  118 (183)
T PF13460_consen   60 GADAVIHAAGPPPK---------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFP  118 (183)
T ss_dssp             TSSEEEECCHSTTT---------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGH
T ss_pred             hcchhhhhhhhhcc---------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchh
Confidence            79999999975332         1            3444555555677777899999997766544332         2


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .|...|...+.+.   +    ..+++...|.||.+
T Consensus       119 ~~~~~~~~~e~~~---~----~~~~~~~ivrp~~~  146 (183)
T PF13460_consen  119 EYARDKREAEEAL---R----ESGLNWTIVRPGWI  146 (183)
T ss_dssp             HHHHHHHHHHHHH---H----HSTSEEEEEEESEE
T ss_pred             hhHHHHHHHHHHH---H----hcCCCEEEEECcEe
Confidence            4555665554433   1    24899999999998

...

>KOG1430|consensus

Probab=99.24  E-value=2e-10  Score=93.52  Aligned_cols=172  Identities=18%  Similarity=0.207  Sum_probs=114.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++.++|||||+|.+|+++++.|.+.+  ..+.++|..+...     ....+..  .+  ....+..+..|..+...    
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~-----~~~~e~~--~~--~~~~v~~~~~D~~~~~~----   69 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS-----NLPAELT--GF--RSGRVTVILGDLLDANS----   69 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc-----ccchhhh--cc--cCCceeEEecchhhhhh----
Confidence            45699999999999999999999998  7899987643211     0111110  00  12223333333333333    


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--------  157 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--------  157 (223)
                      +.+.+.+. .+||+|+...    ...-..+.+..+++|+.|+.++++.+    .+.+..++|++||.....+        
T Consensus        70 i~~a~~~~-~Vvh~aa~~~----~~~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~  140 (361)
T KOG1430|consen   70 ISNAFQGA-VVVHCAASPV----PDFVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGD  140 (361)
T ss_pred             hhhhccCc-eEEEeccccC----ccccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCC
Confidence            33344456 7777776432    22333467889999999999999987    6666789999999765432        


Q ss_pred             ----CCC--CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccccC
Q psy16220        158 ----NFG--QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDI  204 (223)
Q Consensus       158 ----~~~--~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~~  204 (223)
                          .|.  ...|+.||+-.+.+.+..+.   ..+....++.|..|-...++.
T Consensus       141 E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~  190 (361)
T KOG1430|consen  141 ESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKR  190 (361)
T ss_pred             CCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcc
Confidence                232  25899999999988887664   356788999998885444443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.23  E-value=2.2e-10  Score=91.99  Aligned_cols=151  Identities=15%  Similarity=0.169  Sum_probs=89.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFG   91 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (223)
                      +|||||+|.||.+++++|+++|++|++++|+......      ..       ...   ..+...        ....+.+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~-------~~~---~~~~~~--------~~~~~~~~   56 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGAN------TK-------WEG---YKPWAP--------LAESEALE   56 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCc------cc-------cee---eecccc--------cchhhhcC
Confidence            5899999999999999999999999999985433110      00       000   001111        11223446


Q ss_pred             CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC--cEEEEecCcccccCC----------
Q psy16220         92 RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG--RLVMTASNSGLLGNF----------  159 (223)
Q Consensus        92 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~iv~vsS~~~~~~~~----------  159 (223)
                      .+|+|||+|+.....  ...+.+.....+++|+.++..+.+.+    ++.+..  .+|+.|+. +.++..          
T Consensus        57 ~~D~Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~-~~yg~~~~~~~~E~~~  129 (292)
T TIGR01777        57 GADAVINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAV-GYYGTSEDRVFTEEDS  129 (292)
T ss_pred             CCCEEEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeE-EEeCCCCCCCcCcccC
Confidence            799999999964321  22344566778899999999998887    333322  34434432 222211          


Q ss_pred             --CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 --GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 --~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        ....|+..+...+...+    .+...++.+..+.|+.+
T Consensus       130 ~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v  165 (292)
T TIGR01777       130 PAGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIV  165 (292)
T ss_pred             CCCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeE
Confidence              11112222222222222    22345899999999998

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.21  E-value=3.4e-10  Score=91.53  Aligned_cols=164  Identities=18%  Similarity=0.166  Sum_probs=109.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCC-hhhhhHHHHHHHH-------hCCccccccCCccch-
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKS-SKAADTVVAEIRS-------KGGKAVPNYNSVVDG-   79 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-   79 (223)
                      +++|+|||||.+|..+..+|+.+ .++|++..|       +.+ +...+.+.+.+..       ....+..-..|.... 
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVR-------A~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~   73 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVR-------AQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPD   73 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEe-------cCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEeccccccc
Confidence            47999999999999999998855 579999988       233 2233344444431       111222233333321 


Q ss_pred             ----HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         80 ----DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        80 ----~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                          +.-++.+.   ..+|.+|||++..+.-       ....+....|+.|+..+++.+    ...+...+.+|||++..
T Consensus        74 lGL~~~~~~~La---~~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~  139 (382)
T COG3320          74 LGLSERTWQELA---ENVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVG  139 (382)
T ss_pred             CCCCHHHHHHHh---hhcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeec
Confidence                12222222   3599999999965421       235677789999999999986    44444569999997653


Q ss_pred             ccC--------------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        156 LGN--------------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       156 ~~~--------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                      ...                    .-...|+-||++.+.+++.-.    .+|..+..+.||+|+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~  198 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYIT  198 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeee
Confidence            211                    123679999999998887654    348999999999993

>KOG1202|consensus

Probab=99.17  E-value=1.7e-10  Score=103.59  Aligned_cols=177  Identities=22%  Similarity=0.275  Sum_probs=139.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++|+||-||+|+++|+||..+|++ +++.+|...+      .---....+..+.++..+..+..|....+....-+.
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGir------tGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~ 1841 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIR------TGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIE 1841 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccch------hhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHH
Confidence            478999999999999999999999986 6777663222      122223456778889999888888887665544443


Q ss_pred             --HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         88 --ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        88 --~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                        .+.+++.+++|-|....++.+++.+.++|++.-+..+.++.+|-+.-....-+  ...+|.+||.++-.+..++..|+
T Consensus      1842 ~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG 1919 (2376)
T KOG1202|consen 1842 ESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYG 1919 (2376)
T ss_pred             HhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccc
Confidence              35689999999999988899999999999999999999999887765333322  25899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      -++.+++.+++--+.+.-| |   .+|+.|.+
T Consensus      1920 ~aNS~MERiceqRr~~GfP-G---~AiQWGAI 1947 (2376)
T KOG1202|consen 1920 LANSAMERICEQRRHEGFP-G---TAIQWGAI 1947 (2376)
T ss_pred             hhhHHHHHHHHHhhhcCCC-c---ceeeeecc
Confidence            9999999999887766332 4   45666666

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.17  E-value=6.1e-10  Score=87.77  Aligned_cols=126  Identities=23%  Similarity=0.239  Sum_probs=96.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFG   91 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (223)
                      +||||++|-+|.++++.|. .++.|+.++|.         .                  .|++|.+.+..++++.     
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~---------~------------------~Ditd~~~v~~~i~~~-----   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA---------E------------------LDITDPDAVLEVIRET-----   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc---------c------------------ccccChHHHHHHHHhh-----
Confidence            9999999999999999999 67889988661         1                  5777777666666664     


Q ss_pred             CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------CC
Q psy16220         92 RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------FG  160 (223)
Q Consensus        92 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------~~  160 (223)
                      ++|+|||+|+......    -..+-+..+.+|..++.++++++    .+- ...+|++|+-..+-|.           .+
T Consensus        50 ~PDvVIn~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P  120 (281)
T COG1091          50 RPDVVINAAAYTAVDK----AESEPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEKGGPYKETDTPNP  120 (281)
T ss_pred             CCCEEEECcccccccc----ccCCHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCCCCCCCCCCCCCC
Confidence            8999999999754321    12235788999999999999997    333 2689999985543322           25


Q ss_pred             CchhhhhHHHHHHHHHHHH
Q psy16220        161 QANYSAAKMALVGLSNTLS  179 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~  179 (223)
                      ...|+-||.+-+..++...
T Consensus       121 ~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         121 LNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             hhhhhHHHHHHHHHHHHhC
Confidence            6789999999999888765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.13  E-value=2.3e-09  Score=95.82  Aligned_cols=141  Identities=12%  Similarity=0.106  Sum_probs=92.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .+++|||||+|.||+++++.|.++|++|.+..                              .++.|...+...++.   
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~------------------------------~~l~d~~~v~~~i~~---  426 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK------------------------------GRLEDRSSLLADIRN---  426 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEeec------------------------------cccccHHHHHHHHHh---
Confidence            45899999999999999999999999884320                              012222222222222   


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------c
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------G  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------~  157 (223)
                        -++|+|||+|+....... +...++-...+++|+.++.++++.+.    +.+ .+++++||...+-           +
T Consensus       427 --~~pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~----~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p  498 (668)
T PLN02260        427 --VKPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ENG-LLMMNFATGCIFEYDAKHPEGSGIG  498 (668)
T ss_pred             --hCCCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHH----HcC-CeEEEEcccceecCCcccccccCCC
Confidence              268999999997542111 22234557889999999999999983    333 3566666533210           1


Q ss_pred             -------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEe
Q psy16220        158 -------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIV  193 (223)
Q Consensus       158 -------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~  193 (223)
                             .+....|+.+|.+.+.+++.+..   -..+++..+.
T Consensus       499 ~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        499 FKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence                   12236899999999999987642   2456666555

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.10  E-value=5.5e-09  Score=91.23  Aligned_cols=131  Identities=13%  Similarity=0.171  Sum_probs=80.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEccCCCCCCCCCChhhhh-H-----HHHHHHHhCC---------c
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA---SVVVNDLGGQRDGDGKSSKAAD-T-----VVAEIRSKGG---------K   68 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~~-~-----~~~~~~~~~~---------~   68 (223)
                      +++|++|||||||.||..++++|++.+.   +|.++.|......   ..++.. +     +.+.+++...         .
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~---a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K  193 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEA---AIERLKNEVIDAELFKCLQETHGKSYQSFMLSK  193 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchh---HHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence            5899999999999999999999998753   6788877422110   111111 1     1112222111         1


Q ss_pred             ---cccccCCcc-ch-HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Q psy16220         69 ---AVPNYNSVV-DG-DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY  143 (223)
Q Consensus        69 ---~~~~~~~~~-~~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  143 (223)
                         +..|+++.. .+ +...+.+.   ..+|+|||+|+....       .++.+..+++|+.++.++++.+...   .+.
T Consensus       194 i~~v~GDl~d~~LGLs~~~~~~L~---~~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~---~~l  260 (605)
T PLN02503        194 LVPVVGNVCESNLGLEPDLADEIA---KEVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC---KKL  260 (605)
T ss_pred             EEEEEeeCCCcccCCCHHHHHHHH---hcCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc---CCC
Confidence               223554432 01 12233333   259999999997542       1347788999999999999987322   123


Q ss_pred             CcEEEEecCc
Q psy16220        144 GRLVMTASNS  153 (223)
Q Consensus       144 g~iv~vsS~~  153 (223)
                      .++|++||..
T Consensus       261 k~fV~vSTay  270 (605)
T PLN02503        261 KLFLQVSTAY  270 (605)
T ss_pred             CeEEEccCce
Confidence            5799998854

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.06  E-value=4.9e-09  Score=100.79  Aligned_cols=166  Identities=13%  Similarity=0.107  Sum_probs=105.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC----CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC----------CccccccC
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG----ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----------GKAVPNYN   74 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G----~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~   74 (223)
                      .+++||||++|.||.++++.|+++|    ++|+...|...      .....+.+.+.+...+          ..+..|+.
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~------~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~ 1044 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKS------EEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLS 1044 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCC------hHHHHHHHHHHHHHhCCCchhhhcceEEEeccCC
Confidence            4789999999999999999999887    77887776321      1122222222222111          11122333


Q ss_pred             Cccc--hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy16220         75 SVVD--GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN  152 (223)
Q Consensus        75 ~~~~--~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  152 (223)
                      +..-  ....++++.   ..+|++||+|+.....       ..+......|+.++..+++.+    .+.+..+++++||.
T Consensus      1045 ~~~lgl~~~~~~~l~---~~~d~iiH~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~vSS~ 1110 (1389)
T TIGR03443      1045 KEKFGLSDEKWSDLT---NEVDVIIHNGALVHWV-------YPYSKLRDANVIGTINVLNLC----AEGKAKQFSFVSST 1110 (1389)
T ss_pred             CccCCcCHHHHHHHH---hcCCEEEECCcEecCc-------cCHHHHHHhHHHHHHHHHHHH----HhCCCceEEEEeCe
Confidence            2210  122233332   4699999999965421       124445568999999999887    33344589999996


Q ss_pred             ccccc-----------------C-----------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        153 SGLLG-----------------N-----------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       153 ~~~~~-----------------~-----------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                      +.+.+                 .           .....|+.||.+.+.+++..+.    .|+.+..+.||.|.
T Consensus      1111 ~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~ 1180 (1389)
T TIGR03443      1111 SALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVT 1180 (1389)
T ss_pred             eecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccc
Confidence            54311                 0           0124599999999999887543    48999999999983

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.00  E-value=9.5e-10  Score=85.50  Aligned_cols=171  Identities=18%  Similarity=0.133  Sum_probs=116.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   85 (223)
                      +|++||||-||-=|.-+|+.|+++|+.|.-+.|.....+..+    . .+.+.-.....   -...|++|..+...+++.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~r----i-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~   76 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPR----I-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEE   76 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCccc----c-eeccccccCCceeEEEeccccchHHHHHHHHh
Confidence            589999999999999999999999999999988543322111    1 11111011111   223466666666665555


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc--c---------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS--G---------  154 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~--~---------  154 (223)
                      +     .+|-+.|-|+.++-    ..+.++-..+.+++..|+++|+.++.-+-  .+.-++..-||.-  |         
T Consensus        77 v-----~PdEIYNLaAQS~V----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E  145 (345)
T COG1089          77 V-----QPDEIYNLAAQSHV----GVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKE  145 (345)
T ss_pred             c-----Cchhheeccccccc----cccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCcccc
Confidence            4     68889998986543    35556667788899999999999863332  2224565555522  1         


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhC---CCCeEEEEEeCC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGE---KNNIHCNVIVPT  195 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~Pg  195 (223)
                      ..|+.+.++|+++|....-.+...+..|.   -.||-.|.=+|.
T Consensus       146 ~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         146 TTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             CCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence            11455789999999999999988887764   458888887775

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.96  E-value=1.9e-08  Score=80.80  Aligned_cols=140  Identities=12%  Similarity=0.059  Sum_probs=86.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||||.+|++++++|+++|++|.++.|++.+.         ..      .....+..|..|.++....++.. +.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~---------~~------~~~~~~~~d~~d~~~l~~a~~~~-~~~   64 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS---------AG------PNEKHVKFDWLDEDTWDNPFSSD-DGM   64 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc---------cC------CCCccccccCCCHHHHHHHHhcc-cCc
Confidence            389999999999999999999999999998854321         00      01122345676666666655432 233


Q ss_pred             CC-ccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         91 GR-IDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        91 ~~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                      .. +|.++++++...         +..+            ..+.++...++.+..+||++||.....+.       ..+.
T Consensus        65 ~g~~d~v~~~~~~~~---------~~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~  116 (285)
T TIGR03649        65 EPEISAVYLVAPPIP---------DLAP------------PMIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMG  116 (285)
T ss_pred             CCceeEEEEeCCCCC---------ChhH------------HHHHHHHHHHHcCCCEEEEeeccccCCCC-------chHH
Confidence            45 999999876321         0110            11233444566667799999986443321       1232


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ..+.+.+.      ..|+....+.|+++ +++
T Consensus       117 ~~~~~l~~------~~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649       117 QVHAHLDS------LGGVEYTVLRPTWFMENF  142 (285)
T ss_pred             HHHHHHHh------ccCCCEEEEeccHHhhhh
Confidence            22222221      14899999999987 443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=98.92  E-value=2.2e-08  Score=83.66  Aligned_cols=148  Identities=16%  Similarity=0.148  Sum_probs=86.1

Q ss_pred             CcEEEEE----cCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          9 GRVAIVT----GAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~lIt----Ga~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++|||    ||+|.||..++++|+++|+.|++++|......... .... ....++...+  +.....|..+.    +
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~-~~~~-~~~~~l~~~~--v~~v~~D~~d~----~  123 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMK-KEPF-SRFSELSSAG--VKTVWGDPADV----K  123 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhc-cCch-hhhhHhhhcC--ceEEEecHHHH----H
Confidence            4689999    99999999999999999999999988533210000 0000 0111222221  22223333332    2


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG----  160 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~----  160 (223)
                      .+. ....+|+|||+++..                    ..++..++++    .++.+..++|++||...+.....    
T Consensus       124 ~~~-~~~~~d~Vi~~~~~~--------------------~~~~~~ll~a----a~~~gvkr~V~~SS~~vyg~~~~~p~~  178 (378)
T PLN00016        124 SKV-AGAGFDVVYDNNGKD--------------------LDEVEPVADW----AKSPGLKQFLFCSSAGVYKKSDEPPHV  178 (378)
T ss_pred             hhh-ccCCccEEEeCCCCC--------------------HHHHHHHHHH----HHHcCCCEEEEEccHhhcCCCCCCCCC
Confidence            222 124799999987620                    1122334443    35555679999999754322111    


Q ss_pred             ----CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        161 ----QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       161 ----~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                          ..++. +|...+.+.+       ..++.+..+.|+.+
T Consensus       179 E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~v  211 (378)
T PLN00016        179 EGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYI  211 (378)
T ss_pred             CCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeE
Confidence                01122 7888776653       24789999999988

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.87  E-value=1.6e-08  Score=84.37  Aligned_cols=82  Identities=20%  Similarity=0.268  Sum_probs=59.2

Q ss_pred             ccCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          6 RFDGRVAIVTGA----------------GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         6 ~~~~~~~lItGa----------------~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      +++||++|||||                +|++|+++|+.|+++|++|++++++..          ..     ..  ..  
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~----------~~-----~~--~~--  245 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN----------LP-----TP--AG--  245 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc----------cc-----CC--CC--
Confidence            478999999999                555999999999999999999976321          00     00  01  


Q ss_pred             ccccCCccchHHHHHHHHHhcCCccEEEeccCCCCCCC
Q psy16220         70 VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS  107 (223)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~  107 (223)
                       ....|..+.++..+.+.+.++++|++|||||+....+
T Consensus       246 -~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        246 -VKRIDVESAQEMLDAVLAALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             -cEEEccCCHHHHHHHHHHhcCCCCEEEEccccccccc
Confidence             1233445555666666677899999999999865443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.87  E-value=1.3e-08  Score=79.18  Aligned_cols=154  Identities=16%  Similarity=0.176  Sum_probs=97.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFG   91 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (223)
                      ++||||||-||++++..|.+.|+.|+++.|++..         .+..       ....   +.       ..+.+.+...
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~---------~~~~-------~~~~---v~-------~~~~~~~~~~   54 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPK---------ASQN-------LHPN---VT-------LWEGLADALT   54 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcc---------hhhh-------cCcc---cc-------ccchhhhccc
Confidence            5899999999999999999999999999884332         1110       0000   00       1111111112


Q ss_pred             -CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccccCCCCchhhhh--
Q psy16220         92 -RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAA--  167 (223)
Q Consensus        92 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~y~~s--  167 (223)
                       ++|+|||-||..-..  ..++.+.=+..++.-+..+-.|...+    ... ...++..-+|..++++......|.-.  
T Consensus        55 ~~~DavINLAG~~I~~--rrWt~~~K~~i~~SRi~~T~~L~e~I----~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~  128 (297)
T COG1090          55 LGIDAVINLAGEPIAE--RRWTEKQKEEIRQSRINTTEKLVELI----AASETKPKVLISASAVGYYGHSGDRVVTEESP  128 (297)
T ss_pred             CCCCEEEECCCCcccc--ccCCHHHHHHHHHHHhHHHHHHHHHH----HhccCCCcEEEecceEEEecCCCceeeecCCC
Confidence             799999999953221  12566666666666666555555554    422 23566666777888887766665433  


Q ss_pred             --HHHHHHHHHHHHhhhC---CCCeEEEEEeCCCc
Q psy16220        168 --KMALVGLSNTLSIEGE---KNNIHCNVIVPTAA  197 (223)
Q Consensus       168 --K~a~~~~~~~l~~e~~---~~~i~v~~v~Pg~v  197 (223)
                        .-++..+++.|-.+-.   ..|+||..+.-|.|
T Consensus       129 ~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvV  163 (297)
T COG1090         129 PGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVV  163 (297)
T ss_pred             CCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEE
Confidence              3355666666555432   35999999999998

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.85  E-value=1.6e-08  Score=75.37  Aligned_cols=82  Identities=20%  Similarity=0.202  Sum_probs=62.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++||||+ |+|.++++.|+++|++|++.+|         +....+.+...+...  ...+..|+.|..++..+++...+
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R---------~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~   71 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIAR---------REVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIE   71 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEEC---------CHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            69999998 7888899999999999999877         444444444334321  11234589999999999999988


Q ss_pred             hcCCccEEEeccCC
Q psy16220         89 NFGRIDIVINNAGI  102 (223)
Q Consensus        89 ~~~~id~li~~ag~  102 (223)
                      +++++|.+|+.+-.
T Consensus        72 ~~g~id~lv~~vh~   85 (177)
T PRK08309         72 KNGPFDLAVAWIHS   85 (177)
T ss_pred             HcCCCeEEEEeccc
Confidence            89999999977653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.81  E-value=3.2e-08  Score=84.61  Aligned_cols=129  Identities=20%  Similarity=0.249  Sum_probs=90.2

Q ss_pred             CcEEE----EEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          9 GRVAI----VTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~l----ItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      |..+|    |+||++|+|.++++.|...|+.|+...+.         ..+.                             
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~---------~~~~-----------------------------   75 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDG---------GLTW-----------------------------   75 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcc---------cccc-----------------------------
Confidence            34555    88889999999999999999999986431         1100                             


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                       ......+++.+++-+....       +.+++        .+.+.+++..++.|...  |+||+++|..+..   ....|
T Consensus        76 -~~~~~~~~~~~~~d~~~~~-------~~~~l--------~~~~~~~~~~l~~l~~~--griv~i~s~~~~~---~~~~~  134 (450)
T PRK08261         76 -AAGWGDRFGALVFDATGIT-------DPADL--------KALYEFFHPVLRSLAPC--GRVVVLGRPPEAA---ADPAA  134 (450)
T ss_pred             -ccCcCCcccEEEEECCCCC-------CHHHH--------HHHHHHHHHHHHhccCC--CEEEEEccccccC---CchHH
Confidence             0001135666665443111       12222        24446677777777644  8999999976653   34569


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +++|+++.+++|+++.|+ +++|++++|.|+..
T Consensus       135 ~~akaal~gl~rsla~E~-~~gi~v~~i~~~~~  166 (450)
T PRK08261        135 AAAQRALEGFTRSLGKEL-RRGATAQLVYVAPG  166 (450)
T ss_pred             HHHHHHHHHHHHHHHHHh-hcCCEEEEEecCCC
Confidence            999999999999999999 78999999999864

>KOG0747|consensus

Probab=98.80  E-value=3e-08  Score=77.26  Aligned_cols=168  Identities=15%  Similarity=0.054  Sum_probs=104.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+.+|||||.+.||...+..+...  .++.+.++.-.-    ..+    ....++.... ....+-..|..+.......+
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~----~s~----~~~l~~~~n~-p~ykfv~~di~~~~~~~~~~   76 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDY----CSN----LKNLEPVRNS-PNYKFVEGDIADADLVLYLF   76 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccc----ccc----cchhhhhccC-CCceEeeccccchHHHHhhh
Confidence            379999999999999999999977  456665543100    011    1111122111 11222222222222222222


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG---------  157 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~---------  157 (223)
                        ...++|.|||.|+..+.-    .+.-+--...+.|++++..|.+......   +.-++|++|+-..+-.         
T Consensus        77 --~~~~id~vihfaa~t~vd----~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E  147 (331)
T KOG0747|consen   77 --ETEEIDTVIHFAAQTHVD----RSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGE  147 (331)
T ss_pred             --ccCchhhhhhhHhhhhhh----hhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccc
Confidence              225899999999965421    2222334667899999999999874443   3358999998543221         


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ---NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ---~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                         ..+..+|+++|+|.+++.+++...+   |+.+..+.-+-|
T Consensus       148 ~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnV  187 (331)
T KOG0747|consen  148 ASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNV  187 (331)
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCc
Confidence               1245789999999999999999885   677777776666

>KOG1429|consensus

Probab=98.78  E-value=7.1e-08  Score=75.21  Aligned_cols=161  Identities=11%  Similarity=0.054  Sum_probs=100.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ..++++++||||+|.||.++|.+|..+|+.|+++|--        .....+.+...+.    .-.+++.--+-...++. 
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~--------ftg~k~n~~~~~~----~~~fel~~hdv~~pl~~-   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNY--------FTGRKENLEHWIG----HPNFELIRHDVVEPLLK-   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecc--------cccchhhcchhcc----CcceeEEEeechhHHHH-
Confidence            3567899999999999999999999999999998641        1111111110110    00111111111222222 


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---------  156 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---------  156 (223)
                            .+|-++|-|+...+.....    .--+++.+|..+++++...+    ++ -..|+++.|+...+-         
T Consensus        91 ------evD~IyhLAapasp~~y~~----npvktIktN~igtln~lgla----kr-v~aR~l~aSTseVYgdp~~hpq~e  155 (350)
T KOG1429|consen   91 ------EVDQIYHLAAPASPPHYKY----NPVKTIKTNVIGTLNMLGLA----KR-VGARFLLASTSEVYGDPLVHPQVE  155 (350)
T ss_pred             ------HhhhhhhhccCCCCccccc----CccceeeecchhhHHHHHHH----HH-hCceEEEeecccccCCcccCCCcc
Confidence                  3778888887654421111    12356789999999988875    22 226888888754322         


Q ss_pred             -------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 -------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 -------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                             +......|.-.|...+.|+....++   .||.|....+-.+
T Consensus       156 ~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNt  200 (350)
T KOG1429|consen  156 TYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNT  200 (350)
T ss_pred             ccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecc
Confidence                   1224577999999999999988877   5777776665443

>KOG1221|consensus

Probab=98.76  E-value=4.7e-07  Score=76.16  Aligned_cols=182  Identities=15%  Similarity=0.134  Sum_probs=107.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEccCCCCCCCCCC--hhhhhHHHHHHHHhCCc-------cccccC
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERG---ASVVVNDLGGQRDGDGKS--SKAADTVVAEIRSKGGK-------AVPNYN   74 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G---~~vv~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~   74 (223)
                      ++||+++||||||++|+.+..+|++.-   .++.+.-|..........  ....+.+.+.+.+....       +..|.+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            689999999999999999999999763   256776663322111000  01111233333332221       122444


Q ss_pred             Cccc-hH-HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy16220         75 SVVD-GD-KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN  152 (223)
Q Consensus        75 ~~~~-~~-~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  152 (223)
                      +..- +. .-...+   ...+|++||+|+....       .+.++..+.+|+.|+..+.+.+....+-   ..++.+|..
T Consensus        90 ~~~LGis~~D~~~l---~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~vhVSTA  156 (467)
T KOG1221|consen   90 EPDLGISESDLRTL---ADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKL---KALVHVSTA  156 (467)
T ss_pred             CcccCCChHHHHHH---HhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heEEEeehh
Confidence            3332 11 212222   2469999999996543       2567888999999999999987544332   478888875


Q ss_pred             cccc----------cCC------------------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEE
Q psy16220        153 SGLL----------GNF------------------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVI  192 (223)
Q Consensus       153 ~~~~----------~~~------------------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v  192 (223)
                      -+..          +.+                              ..-.|.-+|+-.+++...-+     .+.-+..+
T Consensus       157 y~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPivIi  231 (467)
T KOG1221|consen  157 YSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLVII  231 (467)
T ss_pred             heecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeEEE
Confidence            4431          110                              12335556655555544433     35678999


Q ss_pred             eCCCcccccccCCC
Q psy16220        193 VPTAASRLTEDILP  206 (223)
Q Consensus       193 ~Pg~vt~~~~~~~~  206 (223)
                      .|+.|+....+..|
T Consensus       232 RPsiI~st~~EP~p  245 (467)
T KOG1221|consen  232 RPSIITSTYKEPFP  245 (467)
T ss_pred             cCCceeccccCCCC
Confidence            99999555544444

>PRK12320 hypothetical protein; Provisional

Probab=98.67  E-value=2.8e-07  Score=81.81  Aligned_cols=103  Identities=23%  Similarity=0.243  Sum_probs=68.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|.||++++++|+++|++|++++|..         ...      .......+..|+.+.    . +.+.   .
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~---------~~~------~~~~ve~v~~Dl~d~----~-l~~a---l   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHP---------HDA------LDPRVDYVCASLRNP----V-LQEL---A   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCh---------hhc------ccCCceEEEccCCCH----H-HHHH---h
Confidence            699999999999999999999999999998621         110      000111223344332    1 2222   3


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      ..+|++||+|+.....            ...+|+.++.++++.+    ++.+ .++|++||..
T Consensus        59 ~~~D~VIHLAa~~~~~------------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~  104 (699)
T PRK12320         59 GEADAVIHLAPVDTSA------------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAA  104 (699)
T ss_pred             cCCCEEEEcCccCccc------------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCC
Confidence            4689999999853211            1247899999998887    4444 4899999864

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.66  E-value=1.4e-07  Score=73.18  Aligned_cols=99  Identities=12%  Similarity=0.068  Sum_probs=66.1

Q ss_pred             EEEEEcCCCc-hHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~g-iG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +-.||+.++| ||+++|+.|+++|++|++++++....       .       ..  ...+  ......+.+...+.+.+.
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-------~-------~~--~~~v--~~i~v~s~~~m~~~l~~~   78 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-------P-------EP--HPNL--SIIEIENVDDLLETLEPL   78 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-------C-------CC--CCCe--EEEEEecHHHHHHHHHHH
Confidence            5566766554 99999999999999999997632100       0       00  0001  111133445555556666


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA  127 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  127 (223)
                      ++.+|+||||||.....+....+.++|..++++|.+..
T Consensus        79 ~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         79 VKDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             hcCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            67899999999987666666778888988888876644

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.59  E-value=2.4e-07  Score=77.19  Aligned_cols=109  Identities=17%  Similarity=0.163  Sum_probs=67.3

Q ss_pred             ccCCcEEEEEcC---------------CCc-hHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          6 RFDGRVAIVTGA---------------GAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         6 ~~~~~~~lItGa---------------~~g-iG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      +++||++|||||               |+| +|.++|+.|+++|++|++++++...        .       .  .....
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~--------~-------~--~~~~~  244 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSL--------L-------T--PPGVK  244 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCcc--------C-------C--CCCcE
Confidence            478999999999               556 9999999999999999998753211        0       0  00112


Q ss_pred             ccccCCccchHHHHHHHH-HhcCCccEEEeccCCCCCCCCCCCC--HHHHHHHHHhhhhHHHHHHHHH
Q psy16220         70 VPNYNSVVDGDKIVQTAL-ENFGRIDIVINNAGILRDKSFARIS--DTDWQLVQDVHLTGAFRVSRAA  134 (223)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~-~~~~~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~  134 (223)
                      ..|+   .+.++.++.+. +.++++|++|+|||+....+....+  .+.....+..|+.-.--+++.+
T Consensus       245 ~~~v---~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       245 SIKV---STAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             EEEe---ccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHH
Confidence            2334   44444444444 3457899999999987654432211  0111123456666666666655

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.56  E-value=2.8e-06  Score=66.12  Aligned_cols=142  Identities=18%  Similarity=0.139  Sum_probs=84.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFG   91 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (223)
                      ++|+||+|.+|+.+++.|++.+++|.++.|         +.  .....+.++..+..+.  ..|..+.+.+    .+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R---------~~--~~~~~~~l~~~g~~vv--~~d~~~~~~l----~~al~   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVR---------DP--SSDRAQQLQALGAEVV--EADYDDPESL----VAALK   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEES---------SS--HHHHHHHHHHTTTEEE--ES-TT-HHHH----HHHHT
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEe---------cc--chhhhhhhhcccceEe--ecccCCHHHH----HHHHc
Confidence            689999999999999999999999999988         32  1223445555554432  4444444443    33345


Q ss_pred             CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC---CCCchhhhhH
Q psy16220         92 RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN---FGQANYSAAK  168 (223)
Q Consensus        92 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~---~~~~~y~~sK  168 (223)
                      .+|.++++.+.....        .        ......+++++    ++.+..++|+.|-.......   .+...+-..|
T Consensus        64 g~d~v~~~~~~~~~~--------~--------~~~~~~li~Aa----~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k  123 (233)
T PF05368_consen   64 GVDAVFSVTPPSHPS--------E--------LEQQKNLIDAA----KAAGVKHFVPSSFGADYDESSGSEPEIPHFDQK  123 (233)
T ss_dssp             TCSEEEEESSCSCCC--------H--------HHHHHHHHHHH----HHHT-SEEEESEESSGTTTTTTSTTHHHHHHHH
T ss_pred             CCceEEeecCcchhh--------h--------hhhhhhHHHhh----hccccceEEEEEecccccccccccccchhhhhh
Confidence            899999888854311        1        11233444444    45555678754433333111   1122333467


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..++.+.+..       ++....|.||+.
T Consensus       124 ~~ie~~l~~~-------~i~~t~i~~g~f  145 (233)
T PF05368_consen  124 AEIEEYLRES-------GIPYTIIRPGFF  145 (233)
T ss_dssp             HHHHHHHHHC-------TSEBEEEEE-EE
T ss_pred             hhhhhhhhhc-------cccceeccccch
Confidence            6666555433       889999999987

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.50  E-value=7.6e-07  Score=71.66  Aligned_cols=87  Identities=18%  Similarity=0.262  Sum_probs=55.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+..      ..++.+++.+++.+.+........|..+.+.   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~------~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~---  192 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDD------FYERAEQTAEKIKQEVPECIVNVYDLNDTEK---  192 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCch------HHHHHHHHHHHHhhcCCCceeEEechhhhhH---
Confidence            467899999999 69999999999999996 999987210      0145556666665543332222233332222   


Q ss_pred             HHHHhcCCccEEEeccCCC
Q psy16220         85 TALENFGRIDIVINNAGIL  103 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~  103 (223)
                       +.+.....|+||||....
T Consensus       193 -~~~~~~~~DilINaTp~G  210 (289)
T PRK12548        193 -LKAEIASSDILVNATLVG  210 (289)
T ss_pred             -HHhhhccCCEEEEeCCCC
Confidence             122233579999987643

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.50  E-value=1.7e-05  Score=68.19  Aligned_cols=184  Identities=16%  Similarity=0.156  Sum_probs=114.2

Q ss_pred             ccccCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh----CC---ccccccCC
Q psy16220          4 QVRFDGRVAIVTGAG-AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GG---KAVPNYNS   75 (223)
Q Consensus         4 ~~~~~~~~~lItGa~-~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~   75 (223)
                      ...+.++++||||++ +.||.+++..|+..|++|+++..        +-.+...+.++.+=.+    +.   .+.....+
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS--------~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~S  462 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTS--------RLSEERTEFYRSLYARHARYGAALWVVPANMGS  462 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcc--------cccHHHHHHHHHHHHhhCCCCceEEEEeccccc
Confidence            345678999999997 78999999999999999999843        1222333334443222    22   12457888


Q ss_pred             ccchHHHHHHHHHhcC--------------CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Q psy16220         76 VVDGDKIVQTALENFG--------------RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ  141 (223)
Q Consensus        76 ~~~~~~~~~~~~~~~~--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  141 (223)
                      ..|++.+++-|-.+..              .+|.++-.|+....+.+.+.... -+-.+++-+.+...++-.+.++-..+
T Consensus       463 ysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r  541 (866)
T COG4982         463 YSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSR  541 (866)
T ss_pred             hhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            8889998887743221              37888888887766666655433 23445555666666666554443222


Q ss_pred             CC-Cc--EEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhC-CCCeEEEEEeCCCc
Q psy16220        142 NY-GR--LVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE-KNNIHCNVIVPTAA  197 (223)
Q Consensus       142 ~~-g~--iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v  197 (223)
                      +. .|  +|+=.|. ..-.+.+..+|+-+|++++.+..-|..|-. ..-+.+..-.-|++
T Consensus       542 ~v~~R~hVVLPgSP-NrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWt  600 (866)
T COG4982         542 GVDTRLHVVLPGSP-NRGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWT  600 (866)
T ss_pred             CcccceEEEecCCC-CCCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeee
Confidence            21 23  3333331 111234678999999999999988877742 12244444444555

>KOG1203|consensus

Probab=98.42  E-value=4.8e-06  Score=69.11  Aligned_cols=167  Identities=21%  Similarity=0.161  Sum_probs=93.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +-.+|+|+||+|++|+-+++.|.++|+.|..+.|         +....+......... ....-...+.....+....+.
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VR---------d~~~a~~~~~~~~~d-~~~~~v~~~~~~~~d~~~~~~  147 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVR---------DEQKAEDLLGVFFVD-LGLQNVEADVVTAIDILKKLV  147 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeecc---------Chhhhhhhhcccccc-cccceeeeccccccchhhhhh
Confidence            4469999999999999999999999999999877         444333332200000 000001111111122233333


Q ss_pred             HhcC-CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         88 ENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        88 ~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      +..+ ...+++.++|......       +.....++...|..+++.++    +..+..+++++||+.+.........+..
T Consensus       148 ~~~~~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~  216 (411)
T KOG1203|consen  148 EAVPKGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL  216 (411)
T ss_pred             hhccccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh
Confidence            3322 3456666666433221       22233346666788888887    5555679999999877655443333331


Q ss_pred             hHHHHHH-HHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        167 AKMALVG-LSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       167 sK~a~~~-~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        .+... .-+....++...|+.-..|.||..
T Consensus       217 --~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~  246 (411)
T KOG1203|consen  217 --NGLVLKAKLKAEKFLQDSGLPYTIIRPGGL  246 (411)
T ss_pred             --hhhhhHHHHhHHHHHHhcCCCcEEEecccc
Confidence              11111 112333344467888889999976

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.41  E-value=2.7e-06  Score=64.47  Aligned_cols=84  Identities=23%  Similarity=0.302  Sum_probs=56.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++++++|+||+|++|+++++.|+++|++|++++|         +..+.+.+.+.+.+... ......+..+.+...+
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R---------~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~   93 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR---------DLERAQKAADSLRARFG-EGVGAVETSDDAARAA   93 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhhcC-CcEEEeeCCCHHHHHH
Confidence            3678899999999999999999999999999999977         66666666666643221 1122223333333222


Q ss_pred             HHHHhcCCccEEEeccCC
Q psy16220         85 TALENFGRIDIVINNAGI  102 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~  102 (223)
                      .    +...|++|++...
T Consensus        94 ~----~~~~diVi~at~~  107 (194)
T cd01078          94 A----IKGADVVFAAGAA  107 (194)
T ss_pred             H----HhcCCEEEECCCC
Confidence            2    2357888887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1431|consensus

Probab=98.36  E-value=7e-06  Score=62.30  Aligned_cols=153  Identities=16%  Similarity=0.143  Sum_probs=95.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC---eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA---SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +++||||++|-+|.+|.+.+.++|.   +.++...                           -..|+++..+.+++++..
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------------kd~DLt~~a~t~~lF~~e   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------------KDADLTNLADTRALFESE   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------------ccccccchHHHHHHHhcc
Confidence            5899999999999999999999876   3343321                           123555666666666553


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCC--CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFAR--ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--------  156 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~--------  156 (223)
                           ++..+||.|+.... -+..  ...+-|.    .|+.-.-++++.+.    +.+...++++.|.+-+-        
T Consensus        55 -----kPthVIhlAAmVGG-lf~N~~ynldF~r----~Nl~indNVlhsa~----e~gv~K~vsclStCIfPdkt~yPId  120 (315)
T KOG1431|consen   55 -----KPTHVIHLAAMVGG-LFHNNTYNLDFIR----KNLQINDNVLHSAH----EHGVKKVVSCLSTCIFPDKTSYPID  120 (315)
T ss_pred             -----CCceeeehHhhhcc-hhhcCCCchHHHh----hcceechhHHHHHH----HhchhhhhhhcceeecCCCCCCCCC
Confidence                 78889999875532 2222  2233343    34433344445442    22223566665543321        


Q ss_pred             --------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccccCCC
Q psy16220        157 --------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILP  206 (223)
Q Consensus       157 --------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~~~~  206 (223)
                              +.|...-|+.+|..+.-..+.++.+++   -...++.|..+-...++.-+
T Consensus       121 Etmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg---~~~tsviPtNvfGphDNfnp  175 (315)
T KOG1431|consen  121 ETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG---RDYTSVIPTNVFGPHDNFNP  175 (315)
T ss_pred             HHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC---CceeeeccccccCCCCCCCc
Confidence                    234567799999999988999999854   46677788777544444444

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.24  E-value=7.3e-06  Score=58.38  Aligned_cols=77  Identities=26%  Similarity=0.337  Sum_probs=55.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++++++++|.|+ ||.|++++..|++.|++ +.++.|         +.++.+++.+.+..    ........++..    
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nR---------t~~ra~~l~~~~~~----~~~~~~~~~~~~----   70 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNR---------TPERAEALAEEFGG----VNIEAIPLEDLE----   70 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEES---------SHHHHHHHHHHHTG----CSEEEEEGGGHC----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEEC---------CHHHHHHHHHHcCc----cccceeeHHHHH----
Confidence            578999999998 89999999999999987 888877         77888777777721    112222223222    


Q ss_pred             HHHHhcCCccEEEeccCCC
Q psy16220         85 TALENFGRIDIVINNAGIL  103 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~  103 (223)
                         +.....|++|++.+..
T Consensus        71 ---~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   71 ---EALQEADIVINATPSG   86 (135)
T ss_dssp             ---HHHHTESEEEE-SSTT
T ss_pred             ---HHHhhCCeEEEecCCC
Confidence               1223689999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN00106 malate dehydrogenase

Probab=98.22  E-value=4.1e-05  Score=62.39  Aligned_cols=147  Identities=16%  Similarity=0.145  Sum_probs=92.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-cccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   85 (223)
                      .+++.|||++|.+|.+++..|+.++.  .++++|++. .        ..+  ..++...... ...++.+..+       
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~--------~g~--a~Dl~~~~~~~~i~~~~~~~d-------   79 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-T--------PGV--AADVSHINTPAQVRGFLGDDQ-------   79 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-C--------Cee--EchhhhCCcCceEEEEeCCCC-------
Confidence            35899999999999999999996654  799998743 1        000  0011111111 1112112221       


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc----------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL----------  155 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~----------  155 (223)
                      +.+.+...|++|++||.... +     ...+.+.+..|+.....+.+.+    .+....++++++|.-..          
T Consensus        80 ~~~~l~~aDiVVitAG~~~~-~-----g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~  149 (323)
T PLN00106         80 LGDALKGADLVIIPAGVPRK-P-----GMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVL  149 (323)
T ss_pred             HHHHcCCCCEEEEeCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHH
Confidence            23345679999999996432 1     1346777888888766666665    55555567777664442          


Q ss_pred             ---ccCCCCchhhhhHHHHHHHHHHHHhhhC
Q psy16220        156 ---LGNFGQANYSAAKMALVGLSNTLSIEGE  183 (223)
Q Consensus       156 ---~~~~~~~~y~~sK~a~~~~~~~l~~e~~  183 (223)
                         .+.|....|+.++.--..|-..++.++.
T Consensus       150 ~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        150 KKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             HHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence               2456678899998666678888888864

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.18  E-value=3.4e-05  Score=77.47  Aligned_cols=179  Identities=15%  Similarity=0.073  Sum_probs=114.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +.++.++|++.+++++.+++.+|.++|+.|+++...          .........+.+....+.....|..++..+++.+
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1822 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSP----------WVVSHSASPLASAIASVTLGTIDDTSIEAVIKDI 1822 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecc----------ccccccccccccccccccccccchHHHHHHHHhh
Confidence            457788999889999999999999999999887311          0000000111112222333444556667777777


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh--
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY--  164 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y--  164 (223)
                      ....++++++||..+..... ....+.......-...+...|.+.|.+.+.+...+.+.++.++...|..+..+....  
T Consensus      1823 ~~~~~~~~g~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~ 1901 (2582)
T TIGR02813      1823 EEKTAQIDGFIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSG 1901 (2582)
T ss_pred             hccccccceEEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccc
Confidence            77778999999987744210 000000011111223445578888887776665555789999988777665433221  


Q ss_pred             ------hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCC
Q psy16220        165 ------SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTA  196 (223)
Q Consensus       165 ------~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~  196 (223)
                            ....+++.+|+|+++.|+.....+...+.|..
T Consensus      1902 ~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1902 TQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             ccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence                  23589999999999999987778888887763

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK09620 hypothetical protein; Provisional

Probab=98.17  E-value=5.2e-06  Score=64.42  Aligned_cols=35  Identities=29%  Similarity=0.447  Sum_probs=32.1

Q ss_pred             cCCcEEEEEcCC----------------CchHHHHHHHHHHcCCeEEEEcc
Q psy16220          7 FDGRVAIVTGAG----------------AGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~----------------~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++||++|||+|.                |.+|.++|++|+++|+.|++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g   51 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG   51 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence            478999999886                99999999999999999999875

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.16  E-value=1e-05  Score=69.23  Aligned_cols=79  Identities=23%  Similarity=0.365  Sum_probs=53.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|+++|+|+++ +|.++|+.|+++|+.|++.++..        .....+..+++.+.+..+  ...+..+       
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~--------~~~~~~~~~~l~~~~~~~--~~~~~~~-------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE--------EDQLKEALEELGELGIEL--VLGEYPE-------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc--------hHHHHHHHHHHHhcCCEE--EeCCcch-------
Confidence            57899999999888 99999999999999999997621        122333344554433222  1112221       


Q ss_pred             HHHhcCCccEEEeccCCCC
Q psy16220         86 ALENFGRIDIVINNAGILR  104 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~  104 (223)
                        +..+.+|+||+++|...
T Consensus        64 --~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         64 --EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             --hHhhcCCEEEECCCCCC
Confidence              22357999999998643

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.16  E-value=6.4e-05  Score=59.63  Aligned_cols=134  Identities=22%  Similarity=0.156  Sum_probs=82.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      .+|||||||.+|.+++++|.++|++|.+..|         +.+......       ..+.....|..+...+...    +
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r---------~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a----~   61 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVR---------NPEAAAALA-------GGVEVVLGDLRDPKSLVAG----A   61 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEe---------CHHHHHhhc-------CCcEEEEeccCCHhHHHHH----h
Confidence            6899999999999999999999999999988         444433322       3334444444444443333    3


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHHH
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMA  170 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~a  170 (223)
                      ..+|.+++..+... ...         ........+.....+...     .+...++.+|+..+..  .....|..+|..
T Consensus        62 ~G~~~~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~  124 (275)
T COG0702          62 KGVDGVLLISGLLD-GSD---------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAA  124 (275)
T ss_pred             ccccEEEEEecccc-ccc---------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHH
Confidence            46888888877543 211         111122223333333321     2224566666655443  345778999998


Q ss_pred             HHHHHHHHHhh
Q psy16220        171 LVGLSNTLSIE  181 (223)
Q Consensus       171 ~~~~~~~l~~e  181 (223)
                      .+...++....
T Consensus       125 ~e~~l~~sg~~  135 (275)
T COG0702         125 VEAALRSSGIP  135 (275)
T ss_pred             HHHHHHhcCCC
Confidence            88887766555

>KOG4039|consensus

Probab=98.13  E-value=9e-06  Score=59.38  Aligned_cols=155  Identities=16%  Similarity=0.078  Sum_probs=98.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      ++.++++.++|.||+|-.|..+.+++++.+-  +|+++.|....++                +.+..+.....|   .++
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~----------------at~k~v~q~~vD---f~K   73 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP----------------ATDKVVAQVEVD---FSK   73 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc----------------cccceeeeEEec---hHH
Confidence            5677899999999999999999999999974  5888877432211                001111111111   222


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                       +++....+..+|+++++-|....+.       ..+..+.+..--.+.+++.+    ++.+...|+++||..+.-.  ..
T Consensus        74 -l~~~a~~~qg~dV~FcaLgTTRgka-------GadgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~s--Sr  139 (238)
T KOG4039|consen   74 -LSQLATNEQGPDVLFCALGTTRGKA-------GADGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPS--SR  139 (238)
T ss_pred             -HHHHHhhhcCCceEEEeeccccccc-------ccCceEeechHHHHHHHHHH----HhCCCeEEEEEeccCCCcc--cc
Confidence             4445556678999999988653321       11122222222234445544    5666678999999765543  35


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..|--.|.-++.=...|..+      ++..+.||++
T Consensus       140 FlY~k~KGEvE~~v~eL~F~------~~~i~RPG~l  169 (238)
T KOG4039|consen  140 FLYMKMKGEVERDVIELDFK------HIIILRPGPL  169 (238)
T ss_pred             eeeeeccchhhhhhhhcccc------EEEEecCcce
Confidence            67888898888777666655      6888999998

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.13  E-value=1.3e-05  Score=65.55  Aligned_cols=75  Identities=19%  Similarity=0.305  Sum_probs=51.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAER-G-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~-G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      .++++|+++||||+|.||..+|++|+++ | .+++++.|         +..++..+.+++..         .+..     
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R---------~~~rl~~La~el~~---------~~i~-----  207 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVAR---------QQERLQELQAELGG---------GKIL-----  207 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcC---------CHHHHHHHHHHhcc---------ccHH-----
Confidence            3578999999999999999999999865 5 58888866         55555554444321         0111     


Q ss_pred             HHHHHHhcCCccEEEeccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILR  104 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~  104 (223)
                        .+.+.+...|++|+.++...
T Consensus       208 --~l~~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        208 --SLEEALPEADIVVWVASMPK  227 (340)
T ss_pred             --hHHHHHccCCEEEECCcCCc
Confidence              12234457999999998643

>KOG2865|consensus

Probab=98.11  E-value=1.7e-05  Score=62.33  Aligned_cols=124  Identities=23%  Similarity=0.205  Sum_probs=84.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++|-++-|.||||.+|+-++.+|++.|-.|++-.|..+.      ...--+...++. +..-..+|..|.+++.++++
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~------~~r~lkvmGdLG-Qvl~~~fd~~DedSIr~vvk  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEY------DPRHLKVMGDLG-QVLFMKFDLRDEDSIRAVVK  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCcc------chhheeeccccc-ceeeeccCCCCHHHHHHHHH
Confidence            46778899999999999999999999999999998874321      111111111221 11223457777777776555


Q ss_pred             HHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         85 TALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      .       -+++||-.|--.. +.   .      ...++|+.++-.+++.+    ++.+.-++|.+|+..+.
T Consensus       130 ~-------sNVVINLIGrd~eTkn---f------~f~Dvn~~~aerlAric----ke~GVerfIhvS~Lgan  181 (391)
T KOG2865|consen  130 H-------SNVVINLIGRDYETKN---F------SFEDVNVHIAERLARIC----KEAGVERFIHVSCLGAN  181 (391)
T ss_pred             h-------CcEEEEeeccccccCC---c------ccccccchHHHHHHHHH----HhhChhheeehhhcccc
Confidence            3       6899999985332 22   1      22357888888888877    77767799999997754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.07  E-value=0.00028  Score=52.08  Aligned_cols=147  Identities=16%  Similarity=0.132  Sum_probs=92.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++.|+||+|-.|..|+++..++|+.|+.+.|         +..+....     +.....+.|+.|..+.   .    +..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR---------n~~K~~~~-----~~~~i~q~Difd~~~~---a----~~l   60 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVR---------NASKLAAR-----QGVTILQKDIFDLTSL---A----SDL   60 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEe---------ChHhcccc-----ccceeecccccChhhh---H----hhh
Confidence            6788999999999999999999999999988         44443221     1111233455444432   1    234


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--------C-CC
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--------F-GQ  161 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~--------~-~~  161 (223)
                      ...|+||..-+.....+      +  ....        .-.+.++..++.....|++.++...+..-.        | ..
T Consensus        61 ~g~DaVIsA~~~~~~~~------~--~~~~--------k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP  124 (211)
T COG2910          61 AGHDAVISAFGAGASDN------D--ELHS--------KSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFP  124 (211)
T ss_pred             cCCceEEEeccCCCCCh------h--HHHH--------HHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCc
Confidence            57999999887653221      1  1111        114555555677677899999887665422        2 22


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..|-..-.+..-+.+.|+.+   ..+.-.-|+|...
T Consensus       125 ~ey~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~  157 (211)
T COG2910         125 AEYKPEALAQAEFLDSLRAE---KSLDWTFVSPAAF  157 (211)
T ss_pred             hhHHHHHHHHHHHHHHHhhc---cCcceEEeCcHHh
Confidence            33544444445566777777   3477888888876

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.01  E-value=0.00013  Score=58.93  Aligned_cols=138  Identities=21%  Similarity=0.239  Sum_probs=78.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +|++++|+|+++++|.++++.+.+.|++|+++++         +....+..    ...+....++..+....+.+ .+..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~---------~~~~~~~~----~~~g~~~~~~~~~~~~~~~~-~~~~  209 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATAS---------SAEGAELV----RQAGADAVFNYRAEDLADRI-LAAT  209 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HHcCCCEEEeCCCcCHHHHH-HHHc
Confidence            5789999999999999999999999999998865         33333222    22232222333332222222 2221


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc------------c
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG------------L  155 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~------------~  155 (223)
                      . -..+|.++++++..           ..+..               ...+..  .|+++.+++...            .
T Consensus       210 ~-~~~~d~vi~~~~~~-----------~~~~~---------------~~~l~~--~g~~v~~~~~~~~~~~~~~~~~~~~  260 (325)
T cd08253         210 A-GQGVDVIIEVLANV-----------NLAKD---------------LDVLAP--GGRIVVYGSGGLRGTIPINPLMAKE  260 (325)
T ss_pred             C-CCceEEEEECCchH-----------HHHHH---------------HHhhCC--CCEEEEEeecCCcCCCChhHHHhcC
Confidence            1 13699999998721           01111               111222  388988876321            1


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeE
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH  188 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~  188 (223)
                      ...++...|...|..+..+.+.+...+....++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         261 ASIRGVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             ceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            111223356677777777777776665554444

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.95  E-value=2.9e-05  Score=66.39  Aligned_cols=35  Identities=34%  Similarity=0.451  Sum_probs=32.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++++|+++|||+++ +|.++|+.|+++|++|++.++
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~   36 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDG   36 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcC
Confidence            46789999999986 999999999999999999876

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.89  E-value=3.2e-05  Score=64.13  Aligned_cols=78  Identities=28%  Similarity=0.341  Sum_probs=52.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +.+||.|+ |++|+.+|..|+++| .+|.+.+|         +..+..+.......   .+.....|..+.+++.+.+ +
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR---------s~~~~~~i~~~~~~---~v~~~~vD~~d~~al~~li-~   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR---------SKEKCARIAELIGG---KVEALQVDAADVDALVALI-K   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeC---------CHHHHHHHHhhccc---cceeEEecccChHHHHHHH-h
Confidence            47899999 999999999999999 89999988         55555544443322   3333344444444444433 3


Q ss_pred             hcCCccEEEeccCCCC
Q psy16220         89 NFGRIDIVINNAGILR  104 (223)
Q Consensus        89 ~~~~id~li~~ag~~~  104 (223)
                      +   .|++|+++....
T Consensus        68 ~---~d~VIn~~p~~~   80 (389)
T COG1748          68 D---FDLVINAAPPFV   80 (389)
T ss_pred             c---CCEEEEeCCchh
Confidence            2   399999998543

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.88  E-value=3.7e-05  Score=57.63  Aligned_cols=80  Identities=19%  Similarity=0.212  Sum_probs=51.5

Q ss_pred             cCCcEEEEEcCC----------------CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220          7 FDGRVAIVTGAG----------------AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         7 ~~~~~~lItGa~----------------~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      ++||++|||+|.                |..|.++|+.++.+|++|+++..+.          ...     .+     ..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~----------~~~-----~p-----~~   60 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS----------SLP-----PP-----PG   60 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT----------S--------------TT
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc----------ccc-----cc-----cc
Confidence            478999999874                6899999999999999999986521          110     00     11


Q ss_pred             cccCCccchHHHHHHHHHhcCCccEEEeccCCCCCC
Q psy16220         71 PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDK  106 (223)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~  106 (223)
                      .......+.+..++.+.+.+..-|++|++|++....
T Consensus        61 ~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   61 VKVIRVESAEEMLEAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             EEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred             ceEEEecchhhhhhhhccccCcceeEEEecchhhee
Confidence            234445666777777777777779999999987543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG1372|consensus

Probab=97.79  E-value=2.5e-05  Score=60.10  Aligned_cols=173  Identities=18%  Similarity=0.105  Sum_probs=104.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH-HhCCcc---ccccCCccchHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKA---VPNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~   84 (223)
                      .|++||||-+|-=|.-+|..|+.+|+.|.-+-|....-    +..+.+-++..-. ..+...   ..|++|.+...++++
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsF----NT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~  103 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSF----NTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS  103 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeecccc----chhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence            46999999999999999999999999998887743332    2333333332211 112222   236777666666665


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC--cc--------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN--SG--------  154 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~--~~--------  154 (223)
                      .+     +++-+.|.|+..+.+    ++.+--+.+-++...|++.|+.++...-...+ -++---|+.  -+        
T Consensus       104 ~i-----kPtEiYnLaAQSHVk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAstSElyGkv~e~PQs  173 (376)
T KOG1372|consen  104 TI-----KPTEVYNLAAQSHVK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQASTSELYGKVQEIPQS  173 (376)
T ss_pred             cc-----CchhhhhhhhhcceE----EEeecccceeeccchhhhhHHHHHHhcCcccc-eeEEecccHhhcccccCCCcc
Confidence            54     567777878766543    22233345566788899999888755533332 233322321  11        


Q ss_pred             -cccCCCCchhhhhHHHHHHHHHHHHhh---hCCCCeEEEEEeCC
Q psy16220        155 -LLGNFGQANYSAAKMALVGLSNTLSIE---GEKNNIHCNVIVPT  195 (223)
Q Consensus       155 -~~~~~~~~~y~~sK~a~~~~~~~l~~e---~~~~~i~v~~v~Pg  195 (223)
                       ..|+.+.++|+++|.+.--++-.++..   ++=.||-+|.=+|-
T Consensus       174 E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR  218 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR  218 (376)
T ss_pred             cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence             124456789999997654444333333   23457777777764

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.71  E-value=0.00028  Score=56.31  Aligned_cols=75  Identities=21%  Similarity=0.319  Sum_probs=52.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|         +..+.+++.+++...+. ...  .+   ...     
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R---------~~~~~~~la~~~~~~~~-~~~--~~---~~~-----  173 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANR---------TVSKAEELAERFQRYGE-IQA--FS---MDE-----  173 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhhcCc-eEE--ec---hhh-----
Confidence            45789999999 69999999999999999999877         66666666666544321 111  00   111     


Q ss_pred             HHhcCCccEEEeccCCC
Q psy16220         87 LENFGRIDIVINNAGIL  103 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~  103 (223)
                       ......|+||++.+..
T Consensus       174 -~~~~~~DivInatp~g  189 (270)
T TIGR00507       174 -LPLHRVDLIINATSAG  189 (270)
T ss_pred             -hcccCccEEEECCCCC
Confidence             1124689999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.67  E-value=0.00058  Score=55.71  Aligned_cols=161  Identities=14%  Similarity=0.084  Sum_probs=94.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-CccccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-GKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   84 (223)
                      +-+++.|||++|.+|..++..|+.++  ..++++|+...       .....    ++.... .....+..|..+      
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~-------~g~a~----Dl~~~~~~~~v~~~td~~~------   69 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA-------PGVAA----DLSHIDTPAKVTGYADGEL------   69 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC-------ccccc----chhhcCcCceEEEecCCCc------
Confidence            44589999999999999999998554  57999987111       00010    111111 111122222222      


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc----------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG----------  154 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~----------  154 (223)
                       +.+.+...|++|+++|.... +     .+.+.+.++.|+.....+.+.+    .+.+..++|+++|...          
T Consensus        70 -~~~~l~gaDvVVitaG~~~~-~-----~~tR~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNPvdv~~~~~~~~  138 (321)
T PTZ00325         70 -WEKALRGADLVLICAGVPRK-P-----GMTRDDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNPVNSTVPIAAET  138 (321)
T ss_pred             -hHHHhCCCCEEEECCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCcHHHHHHHHHhh
Confidence             12334679999999996322 1     1346677888887776666665    6666678888888432          


Q ss_pred             ---cccCCCCchhhhhHHHHH--HHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        155 ---LLGNFGQANYSAAKMALV--GLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       155 ---~~~~~~~~~y~~sK~a~~--~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                         ..+.|....|+.+  .|+  .|-..++..+   |+....|. ++| -+..+
T Consensus       139 ~~~~sg~p~~~viG~g--~LDs~R~r~~la~~l---~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        139 LKKAGVYDPRKLFGVT--TLDVVRARKFVAEAL---GMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             hhhccCCChhheeech--hHHHHHHHHHHHHHh---CcChhheE-EEEEeecCC
Confidence               1234566678776  255  3445555554   55555555 444 44555

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.64  E-value=0.00048  Score=56.41  Aligned_cols=118  Identities=14%  Similarity=0.185  Sum_probs=64.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-------CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG-------ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +++||||+|.+|.+++..|+..+       ..+++++++....       ..+....++.........+....       
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-------~~~g~~~Dl~d~~~~~~~~~~~~-------   69 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-------ALEGVVMELQDCAFPLLKSVVAT-------   69 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-------cccceeeehhhccccccCCceec-------
Confidence            68999999999999999999844       5899998843211       01000001110000000011111       


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCCcEEEEecC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ--NYGRLVMTASN  152 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~vsS~  152 (223)
                      ..+.+.+...|+|||+||.....   ..+.   .+.++.|+.    +.+.+.+.+.+.  +.+.+|.+|..
T Consensus        70 ~~~~~~l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsNP  130 (325)
T cd01336          70 TDPEEAFKDVDVAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGNP  130 (325)
T ss_pred             CCHHHHhCCCCEEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecCc
Confidence            12234456899999999974321   2222   455666665    444454555554  24666766653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.63  E-value=0.0011  Score=54.10  Aligned_cols=79  Identities=22%  Similarity=0.325  Sum_probs=49.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+++++|+|+++++|.++++.+...|++++++++         +....+..    ...+.....+..+....+.+.+...
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAG---------SEDKLERA----KELGADYVIDYRKEDFVREVRELTG  232 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HHcCCCeEEecCChHHHHHHHHHhC
Confidence            4779999999999999999999999999988865         43333222    2222222223322222222222111


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                        ..++|++++++|
T Consensus       233 --~~~~d~~i~~~g  244 (342)
T cd08266         233 --KRGVDVVVEHVG  244 (342)
T ss_pred             --CCCCcEEEECCc
Confidence              136999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.62  E-value=0.0003  Score=56.43  Aligned_cols=76  Identities=21%  Similarity=0.371  Sum_probs=52.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++++|+++|+|+ ||+|++++..|++.| .+|++++|         +.++.+++.+++..... +  .. +.        
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R---------~~~~a~~l~~~~~~~~~-~--~~-~~--------  177 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNR---------TVERAEELAKLFGALGK-A--EL-DL--------  177 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHhhhccc-e--ee-cc--------
Confidence            467899999997 899999999999999 78999987         66666666665543210 1  11 00        


Q ss_pred             HHHHhcCCccEEEeccCCC
Q psy16220         85 TALENFGRIDIVINNAGIL  103 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~  103 (223)
                      ...+.....|+||++....
T Consensus       178 ~~~~~~~~~DivInaTp~g  196 (278)
T PRK00258        178 ELQEELADFDLIINATSAG  196 (278)
T ss_pred             cchhccccCCEEEECCcCC
Confidence            1112235689999998654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.62  E-value=0.00042  Score=50.32  Aligned_cols=77  Identities=23%  Similarity=0.377  Sum_probs=51.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++++++++|+|+ |++|.++++.|++.| .+|.+++|         +....++..+++....  ...+..+   .+.   
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r---------~~~~~~~~~~~~~~~~--~~~~~~~---~~~---   77 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNR---------TLEKAKALAERFGELG--IAIAYLD---LEE---   77 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC---------CHHHHHHHHHHHhhcc--cceeecc---hhh---
Confidence            456789999998 799999999999986 78999877         5555555555544321  1111111   111   


Q ss_pred             HHHHhcCCccEEEeccCCCC
Q psy16220         85 TALENFGRIDIVINNAGILR  104 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~  104 (223)
                          .....|++|++.....
T Consensus        78 ----~~~~~Dvvi~~~~~~~   93 (155)
T cd01065          78 ----LLAEADLIINTTPVGM   93 (155)
T ss_pred             ----ccccCCEEEeCcCCCC
Confidence                1357999999987543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.59  E-value=0.0021  Score=50.03  Aligned_cols=162  Identities=15%  Similarity=0.131  Sum_probs=89.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC----------CCChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD----------GKSSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++++|.|.+ |+|..+++.|++.|. +++++|.+.....+          .-...+.+...+.+.+.+..+.....
T Consensus         8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            4677889999876 999999999999997 78888765432211          11123444445555555444433222


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      +..=.....+++.  ...+|++|.+....                     ..-..+.+.+    .+.+ -.+|...+..+
T Consensus        87 ~~~i~~~~~~~l~--~~~~D~VvdaiD~~---------------------~~k~~L~~~c----~~~~-ip~I~s~g~g~  138 (231)
T cd00755          87 EEFLTPDNSEDLL--GGDPDFVVDAIDSI---------------------RAKVALIAYC----RKRK-IPVISSMGAGG  138 (231)
T ss_pred             eeecCHhHHHHHh--cCCCCEEEEcCCCH---------------------HHHHHHHHHH----HHhC-CCEEEEeCCcC
Confidence            2110011122221  13577777775421                     1112223333    2221 24444444444


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeE--EEEEeCCC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH--CNVIVPTA  196 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~--v~~v~Pg~  196 (223)
                      .........-..+|.-..-|++.++.++.++||+  +-+|.-..
T Consensus       139 ~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~S~E  182 (231)
T cd00755         139 KLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVYSTE  182 (231)
T ss_pred             CCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEeCCC
Confidence            3333333455677788888999999999988885  66665443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.57  E-value=0.0021  Score=51.08  Aligned_cols=153  Identities=18%  Similarity=0.166  Sum_probs=84.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCC-CC---------ChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGD-GK---------SSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++.+|+|.|++ |+|..+|+.|++.| .++.++|.+.....+ .+         ...+.+...+.+.+.+..+.....
T Consensus        27 kL~~s~VlVvG~G-GVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGIG-GVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            4677889998775 99999999999999 589998875433211 11         112233344444444333322111


Q ss_pred             C-ccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         75 S-VVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        75 ~-~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      + ..+.+. .+++.  ...+|+||.+.....                     .-..+.+.+    .+.+ -.+|.+++.+
T Consensus       106 ~~~i~~e~-~~~ll--~~~~D~VIdaiD~~~---------------------~k~~L~~~c----~~~~-ip~I~~gGag  156 (268)
T PRK15116        106 DDFITPDN-VAEYM--SAGFSYVIDAIDSVR---------------------PKAALIAYC----RRNK-IPLVTTGGAG  156 (268)
T ss_pred             ecccChhh-HHHHh--cCCCCEEEEcCCCHH---------------------HHHHHHHHH----HHcC-CCEEEECCcc
Confidence            1 111111 11111  135777777765211                     111233332    2322 3455555544


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHhhhCC-CCeE
Q psy16220        154 GLLGNFGQANYSAAKMALVGLSNTLSIEGEK-NNIH  188 (223)
Q Consensus       154 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~-~~i~  188 (223)
                      +.........-..+|....-|++.++.++.+ +||.
T Consensus       157 ~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        157 GQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             cCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            4444333445677888889999999999987 6774

>KOG2774|consensus

Probab=97.54  E-value=0.00012  Score=56.00  Aligned_cols=156  Identities=20%  Similarity=0.232  Sum_probs=99.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc-CCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAER-GAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~-G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      -..+||||+-|-+|..+|+.|..+ |-. |++.+....              .+.....|.-+..|+.|..+.++.+-  
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP--------------p~~V~~~GPyIy~DILD~K~L~eIVV--  107 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKP--------------PANVTDVGPYIYLDILDQKSLEEIVV--  107 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCC--------------chhhcccCCchhhhhhccccHHHhhc--
Confidence            358999999999999999999866 654 555443111              11223345555567777766554332  


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec-Cccccc------CC
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLG------NF  159 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS-~~~~~~------~~  159 (223)
                         ..+||-|||-.+....     +...+.-...++|+.|..++++.+..+      .-=+|+-| +.++-|      .|
T Consensus       108 ---n~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTP  173 (366)
T KOG2774|consen  108 ---NKRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTP  173 (366)
T ss_pred             ---ccccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCC
Confidence               1489999998764321     112233446789999999999987333      23345544 443332      12


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEe-CCCc
Q psy16220        160 ------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIV-PTAA  197 (223)
Q Consensus       160 ------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~-Pg~v  197 (223)
                            ....|+.||.-.+.+-+.+...   +|+..-|+. ||.+
T Consensus       174 dltIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~i  215 (366)
T KOG2774|consen  174 DLTIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGII  215 (366)
T ss_pred             CeeeecCceeechhHHHHHHHHHHHHhh---cCccceecccCccc
Confidence                  4577999999988888877665   466666664 5555

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.50  E-value=0.0019  Score=53.09  Aligned_cols=80  Identities=25%  Similarity=0.331  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+|+++++|..+++.+...|++|+.+++         +.++.+.+.+.+   +....++..+..+....+.+..
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~---------~~~~~~~~~~~l---Ga~~vi~~~~~~~~~~~i~~~~  218 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAG---------SDEKVDLLKNKL---GFDDAFNYKEEPDLDAALKRYF  218 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHhc---CCceeEEcCCcccHHHHHHHhC
Confidence            4789999999999999999888888999888765         444433322212   3222223222223333333322


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .  +.+|+++.+.|
T Consensus       219 ~--~gvd~v~d~~g  230 (338)
T cd08295         219 P--NGIDIYFDNVG  230 (338)
T ss_pred             C--CCcEEEEECCC
Confidence            1  47999999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.48  E-value=0.019  Score=45.56  Aligned_cols=181  Identities=14%  Similarity=0.077  Sum_probs=98.0

Q ss_pred             cEEEEEcCCCchHHHH--HHHHHHcCCeEEEEccCCCC--CCCCCChhhhhHHHHHHH-HhCC---ccccccCCccchHH
Q psy16220         10 RVAIVTGAGAGLGRSY--ALLLAERGASVVVNDLGGQR--DGDGKSSKAADTVVAEIR-SKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus        10 ~~~lItGa~~giG~a~--a~~l~~~G~~vv~~~r~~~~--~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~   81 (223)
                      |+|||+|+++|.|++.  +..|- -|++-+-+......  ...+..-..-......+. +.+.   .+..|.-+.+-.+.
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            7999999999999984  33343 45654444332221  111111111112222332 2332   22336666666778


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC-CC---------------------------------CCCCCHHHHHHHHHhhhhHH
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD-KS---------------------------------FARISDTDWQLVQDVHLTGA  127 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~-~~---------------------------------~~~~~~~~~~~~~~~n~~~~  127 (223)
                      .++.+...+|++|.+|+.-+...+ .|                                 ++..+.++.+.+..+.=---
T Consensus       121 vIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGeD  200 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGED  200 (398)
T ss_pred             HHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcch
Confidence            899999999999999988653211 11                                 22234444555443322111


Q ss_pred             H-HHHHHHHHHHHhcCCCcEEEEecCcccccCC--CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEE
Q psy16220        128 F-RVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALVGLSNTLSIEGEKNNIHCNV  191 (223)
Q Consensus       128 ~-~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~  191 (223)
                      | ..+.+++..-.-....+-|-.|-.......|  -...-+.+|.-++.-++.+...+++.|-..+.
T Consensus       201 Wq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~v  267 (398)
T COG3007         201 WQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARV  267 (398)
T ss_pred             HHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeee
Confidence            1 2344432221111224555555554444333  34567899999999999999999887655543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.40  E-value=0.00059  Score=57.30  Aligned_cols=76  Identities=32%  Similarity=0.446  Sum_probs=48.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|         +..+.+++.+.+  ....+.....|..+.++ ++++.+ 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r---------~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~-l~~~~~-   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR---------NPEKAERLAEKL--LGDRVEAVQVDVNDPES-LAELLR-   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEES---------SHHHHHHHHT----TTTTEEEEE--TTTHHH-HHHHHT-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC---------CHHHHHHHHhhc--cccceeEEEEecCCHHH-HHHHHh-
Confidence            689999 9999999999998864  7999988         777776665554  23334444444444444 333333 


Q ss_pred             cCCccEEEeccCCC
Q psy16220         90 FGRIDIVINNAGIL  103 (223)
Q Consensus        90 ~~~id~li~~ag~~  103 (223)
                        ..|+|||+++..
T Consensus        67 --~~dvVin~~gp~   78 (386)
T PF03435_consen   67 --GCDVVINCAGPF   78 (386)
T ss_dssp             --TSSEEEE-SSGG
T ss_pred             --cCCEEEECCccc
Confidence              459999999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.39  E-value=0.0045  Score=48.64  Aligned_cols=78  Identities=29%  Similarity=0.401  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+.++||+|+++ +|+++++.+...|.+|+++++         +....+.    +...+.....+..+....+...   .
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~---------~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~---~  196 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDR---------SDEKLEL----AKELGADHVIDYKEEDLEEELR---L  196 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcC---------CHHHHHH----HHHhCCceeccCCcCCHHHHHH---H
Confidence            577999999998 999999988889999999865         3333322    2222322223333322222222   2


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                      ...+.+|+++++++.
T Consensus       197 ~~~~~~d~vi~~~~~  211 (271)
T cd05188         197 TGGGGADVVIDAVGG  211 (271)
T ss_pred             hcCCCCCEEEECCCC
Confidence            223579999999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1198|consensus

Probab=97.39  E-value=0.0013  Score=54.29  Aligned_cols=77  Identities=21%  Similarity=0.362  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +|+.+||.||++|+|.+.++-....| +.|+.++.          ++..    +-+++.+....+|..+    ++..+++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s----------~e~~----~l~k~lGAd~vvdy~~----~~~~e~~  218 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS----------KEKL----ELVKKLGADEVVDYKD----ENVVELI  218 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc----------cchH----HHHHHcCCcEeecCCC----HHHHHHH
Confidence            57899999999999999999888889 55555532          2222    2233445455555555    4444444


Q ss_pred             HHh-cCCccEEEeccCC
Q psy16220         87 LEN-FGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~-~~~id~li~~ag~  102 (223)
                      .+. .+++|+|+-|.|.
T Consensus       219 kk~~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  219 KKYTGKGVDVVLDCVGG  235 (347)
T ss_pred             HhhcCCCccEEEECCCC
Confidence            443 5689999999986

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.31  E-value=0.0031  Score=50.78  Aligned_cols=36  Identities=25%  Similarity=0.296  Sum_probs=32.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++.|++++|+|. |++|+++|+.|...|++|++.+|
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R  182 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGAR  182 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeC
Confidence            4678999999999 56999999999999999999977

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.28  E-value=0.0023  Score=51.44  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=52.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++.++|.|+ ||.|++++..|++.|+ +|.++.|         +.++.+++.+++..... +    ......    ++
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nR---------t~~ka~~La~~~~~~~~-~----~~~~~~----~~  183 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINR---------NPDKLSRLVDLGVQVGV-I----TRLEGD----SG  183 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeC---------CHHHHHHHHHHhhhcCc-c----eeccch----hh
Confidence            57889999977 7999999999999997 6888877         66777777666543211 1    001100    11


Q ss_pred             HHHhcCCccEEEeccCCC
Q psy16220         86 ALENFGRIDIVINNAGIL  103 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~  103 (223)
                      +.......|+|||+....
T Consensus       184 ~~~~~~~~DiVInaTp~g  201 (282)
T TIGR01809       184 GLAIEKAAEVLVSTVPAD  201 (282)
T ss_pred             hhhcccCCCEEEECCCCC
Confidence            122235689999998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.27  E-value=0.0019  Score=51.96  Aligned_cols=77  Identities=16%  Similarity=0.161  Sum_probs=52.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ..++++++|.|+ ||.|++++..|++.|+ +|.+++|         +..+.+.+.+++.........  ....       
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR---------~~~ka~~la~~l~~~~~~~~~--~~~~-------  184 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDV---------DPARAAALADELNARFPAARA--TAGS-------  184 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHHHHHHHhhCCCeEE--Eecc-------
Confidence            356789999998 5799999999999998 7999887         667777777777554322111  1111       


Q ss_pred             HHHHhcCCccEEEeccC
Q psy16220         85 TALENFGRIDIVINNAG  101 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag  101 (223)
                      .+.+.....|+||++..
T Consensus       185 ~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        185 DLAAALAAADGLVHATP  201 (284)
T ss_pred             chHhhhCCCCEEEECCc
Confidence            11222356899999953

>PRK05086 malate dehydrogenase; Provisional

Probab=97.25  E-value=0.0016  Score=53.03  Aligned_cols=117  Identities=19%  Similarity=0.183  Sum_probs=63.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHH-c--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAE-R--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~-~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++++|+||+|++|.+++..|.. .  +..+++++++...          +...-++..........-.+..       .+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~----------~g~alDl~~~~~~~~i~~~~~~-------d~   63 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT----------PGVAVDLSHIPTAVKIKGFSGE-------DP   63 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC----------cceehhhhcCCCCceEEEeCCC-------CH
Confidence            3789999999999999998854 2  4567888763110          0000011110000000000111       12


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      .+.+...|++|.++|.....   ..   +-.+.++.|....-.+.+.    |.+.+..++|.+.|..
T Consensus        64 ~~~l~~~DiVIitaG~~~~~---~~---~R~dll~~N~~i~~~ii~~----i~~~~~~~ivivvsNP  120 (312)
T PRK05086         64 TPALEGADVVLISAGVARKP---GM---DRSDLFNVNAGIVKNLVEK----VAKTCPKACIGIITNP  120 (312)
T ss_pred             HHHcCCCCEEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHH----HHHhCCCeEEEEccCc
Confidence            23335699999999975432   11   2344566666555555444    5655556677776643

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.25  E-value=0.013  Score=48.05  Aligned_cols=150  Identities=11%  Similarity=0.028  Sum_probs=89.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      +++.|+|++|.+|.++|..|+..|.       .++++|++...       +..+...-++........   .+ ..+.  
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~-------~~a~g~a~Dl~~~~~~~~---~~-~~i~--   69 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQAL-------KALEGVAMELEDCAFPLL---AE-IVIT--   69 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcc-------cccceeehhhhhcccccc---Cc-eEEe--
Confidence            4789999999999999999998775       69999873221       111111112211100000   00 0010  


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCccc-----
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGL-----  155 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~-----  155 (223)
                       ....+.+..-|++|.+||... ++  ..+.   .+.+..|+.    +++.+.+.+.+..  .+.+|++|-....     
T Consensus        70 -~~~~~~~~daDivvitaG~~~-k~--g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~  138 (322)
T cd01338          70 -DDPNVAFKDADWALLVGAKPR-GP--GMER---ADLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALIA  138 (322)
T ss_pred             -cCcHHHhCCCCEEEEeCCCCC-CC--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH
Confidence             112344568999999999642 21  2233   334555554    5555666666543  4666666643321     


Q ss_pred             ---cc-CCCCchhhhhHHHHHHHHHHHHhhhC
Q psy16220        156 ---LG-NFGQANYSAAKMALVGLSNTLSIEGE  183 (223)
Q Consensus       156 ---~~-~~~~~~y~~sK~a~~~~~~~l~~e~~  183 (223)
                         .| .|....|+.++..-..|...++..+.
T Consensus       139 ~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         139 MKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence               23 66777899999988899999998875

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.24  E-value=0.0012  Score=56.39  Aligned_cols=80  Identities=18%  Similarity=0.131  Sum_probs=56.5

Q ss_pred             ccCCcEEEEEcCC----------------CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          6 RFDGRVAIVTGAG----------------AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         6 ~~~~~~~lItGa~----------------~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      +++||++|||+|.                |..|.++|+.++.+|++|++++=+        .  .+.          ...
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp--------~--~~~----------~p~  312 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGP--------V--DLA----------DPQ  312 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCC--------c--CCC----------CCC
Confidence            4899999999874                579999999999999999998521        0  000          001


Q ss_pred             ccccCCccchHHHHHHHHHhcCCccEEEeccCCCCCC
Q psy16220         70 VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDK  106 (223)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~  106 (223)
                      ........+.+..++.+.+.+. .|++|++|++....
T Consensus       313 ~v~~i~V~ta~eM~~av~~~~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        313 GVKVIHVESARQMLAAVEAALP-ADIAIFAAAVADWR  348 (475)
T ss_pred             CceEEEecCHHHHHHHHHhhCC-CCEEEEecccccee
Confidence            1223345566677777776665 79999999986543

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.23  E-value=0.00077  Score=58.87  Aligned_cols=47  Identities=28%  Similarity=0.494  Sum_probs=38.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI   62 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~   62 (223)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|         +.++.+.+.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR---------~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANR---------TYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHh
Confidence            467899999999 59999999999999999999877         555555555444

>PRK06849 hypothetical protein; Provisional

Probab=97.20  E-value=0.0024  Score=53.67  Aligned_cols=34  Identities=26%  Similarity=0.391  Sum_probs=31.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.|+|||||++..+|..+++.|.+.|++|++++.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~   36 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADS   36 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            3579999999999999999999999999999976

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.20  E-value=0.0031  Score=50.63  Aligned_cols=81  Identities=20%  Similarity=0.222  Sum_probs=52.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ..++|+++|.|+ ||-|++++..|++.|+ ++.++.|         +.++.+++.+.+............+..+.    +
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR---------~~~ka~~La~~~~~~~~~~~~~~~~~~~~----~  189 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADL---------DTSRAQALADVINNAVGREAVVGVDARGI----E  189 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC---------CHHHHHHHHHHHhhccCcceEEecCHhHH----H
Confidence            356789999998 7999999999999997 6888876         66677777666643322111111111111    1


Q ss_pred             HHHHhcCCccEEEeccCCC
Q psy16220         85 TALENFGRIDIVINNAGIL  103 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~  103 (223)
                         +.....|+|||+....
T Consensus       190 ---~~~~~~divINaTp~G  205 (283)
T PRK14027        190 ---DVIAAADGVVNATPMG  205 (283)
T ss_pred             ---HHHhhcCEEEEcCCCC
Confidence               1123589999987643

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.20  E-value=0.0024  Score=52.86  Aligned_cols=80  Identities=26%  Similarity=0.299  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+|+++++|..+++.+...|++|+.+++         +..+.+.+.++   .+.....+..+..+....+.+..
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~---------~~~k~~~~~~~---lGa~~vi~~~~~~~~~~~i~~~~  225 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---------SSQKVDLLKNK---LGFDEAFNYKEEPDLDAALKRYF  225 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHh---cCCCEEEECCCcccHHHHHHHHC
Confidence            4789999999999999999888888999888754         44443322212   23333333322223333333321


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .  +.+|+++.+.|
T Consensus       226 ~--~gvD~v~d~vG  237 (348)
T PLN03154        226 P--EGIDIYFDNVG  237 (348)
T ss_pred             C--CCcEEEEECCC
Confidence            1  36999999887

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.19  E-value=0.025  Score=45.75  Aligned_cols=36  Identities=28%  Similarity=0.347  Sum_probs=32.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++.+++++|+|. |++|+.+++.|.+.|++|.+++|
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r  183 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGAR  183 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC
Confidence            3567899999998 57999999999999999999987

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.17  E-value=0.0026  Score=52.16  Aligned_cols=77  Identities=30%  Similarity=0.421  Sum_probs=51.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      |.++||+||+||+|...++.+.+.|+.++++..         +.++.+    .+++.+.....+..+.+    +.+++.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~---------s~~k~~----~~~~lGAd~vi~y~~~~----~~~~v~~  205 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVS---------SSEKLE----LLKELGADHVINYREED----FVEQVRE  205 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEec---------CHHHHH----HHHhcCCCEEEcCCccc----HHHHHHH
Confidence            789999999999999999999899966555432         233322    34445555444433332    4445544


Q ss_pred             hcC--CccEEEeccCC
Q psy16220         89 NFG--RIDIVINNAGI  102 (223)
Q Consensus        89 ~~~--~id~li~~ag~  102 (223)
                      ..+  .+|+++...|.
T Consensus       206 ~t~g~gvDvv~D~vG~  221 (326)
T COG0604         206 LTGGKGVDVVLDTVGG  221 (326)
T ss_pred             HcCCCCceEEEECCCH
Confidence            433  59999999983

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.16  E-value=0.0026  Score=51.90  Aligned_cols=79  Identities=20%  Similarity=0.279  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+|+++++|..+++.+...|++|+.+++         +.++.+.    +.+.+....++..+..+.....+...
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~---------s~~~~~~----~~~lGa~~vi~~~~~~~~~~~~~~~~  204 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAG---------SDEKVAY----LKKLGFDVAFNYKTVKSLEETLKKAS  204 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHH----HHHcCCCEEEeccccccHHHHHHHhC
Confidence            4789999999999999998888888999888765         4443332    22333333333333233333333332


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .  +++|+++.+.|
T Consensus       205 ~--~gvdvv~d~~G  216 (325)
T TIGR02825       205 P--DGYDCYFDNVG  216 (325)
T ss_pred             C--CCeEEEEECCC
Confidence            1  36999999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.16  E-value=0.0027  Score=51.71  Aligned_cols=34  Identities=35%  Similarity=0.498  Sum_probs=31.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|+|+++++|+++++.+...|++|+.+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~  195 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTR  195 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeC
Confidence            4679999999999999999999999999988865

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.12  E-value=0.0033  Score=47.94  Aligned_cols=40  Identities=23%  Similarity=0.391  Sum_probs=35.8

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +|..++++||.+||+|| |.+|...++.|.+.|++|+++++
T Consensus         2 ~Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~   41 (202)
T PRK06718          2 MPLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISP   41 (202)
T ss_pred             cceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcC
Confidence            35678899999999999 79999999999999999999864

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.10  E-value=0.0072  Score=48.28  Aligned_cols=106  Identities=22%  Similarity=0.261  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.+++|++|+|..|....+-..-+||+|+-++-         ..++..-+.+++   +....+|....    ++.+.+.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaG---------g~eK~~~l~~~l---GfD~~idyk~~----d~~~~L~  213 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAG---------GAEKCDFLTEEL---GFDAGIDYKAE----DFAQALK  213 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecC---------CHHHHHHHHHhc---CCceeeecCcc----cHHHHHH
Confidence            4889999999999998877766677999998742         444444333332   33333333333    4455555


Q ss_pred             HhcC-CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         88 ENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        88 ~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +..+ .||+.+-|.|.    +                      +..+.+++|...  +||+.++-++.+..
T Consensus       214 ~a~P~GIDvyfeNVGg----~----------------------v~DAv~~~ln~~--aRi~~CG~IS~YN~  256 (340)
T COG2130         214 EACPKGIDVYFENVGG----E----------------------VLDAVLPLLNLF--ARIPVCGAISQYNA  256 (340)
T ss_pred             HHCCCCeEEEEEcCCc----h----------------------HHHHHHHhhccc--cceeeeeehhhcCC
Confidence            5554 69999999984    1                      223455555555  79999887766543

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.09  E-value=0.0037  Score=51.41  Aligned_cols=77  Identities=21%  Similarity=0.239  Sum_probs=48.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .++||+|+++++|..+++.+...|+ +|+.+++         ++++.+.+.+++   +....++..+ .+..+.+.++..
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~---------s~~~~~~~~~~l---Ga~~vi~~~~-~~~~~~i~~~~~  222 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICG---------SDEKCQLLKSEL---GFDAAINYKT-DNVAERLRELCP  222 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcC---------CHHHHHHHHHhc---CCcEEEECCC-CCHHHHHHHHCC
Confidence            7999999999999999888888898 7888754         444443333222   2222223222 233333333321


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                        +.+|+++.+.|
T Consensus       223 --~gvd~vid~~g  233 (345)
T cd08293         223 --EGVDVYFDNVG  233 (345)
T ss_pred             --CCceEEEECCC
Confidence              46999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.09  E-value=0.0027  Score=53.73  Aligned_cols=74  Identities=11%  Similarity=0.223  Sum_probs=50.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++++++++|.|+ ||+|+.+++.|+++|+ ++.++.|         +..+.+.+.+++..   .   ..   .    .++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nR---------t~~ra~~La~~~~~---~---~~---~----~~~  234 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANR---------TIEKAQKITSAFRN---A---SA---H----YLS  234 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHHHHHhcC---C---eE---e----cHH
Confidence            467899999999 8999999999999996 6888766         55555555554421   0   01   1    122


Q ss_pred             HHHHhcCCccEEEeccCC
Q psy16220         85 TALENFGRIDIVINNAGI  102 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~  102 (223)
                      ++.+.+...|+||++.+.
T Consensus       235 ~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        235 ELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             HHHHHhccCCEEEECcCC
Confidence            333344568888888774

>cd00704 MDH Malate dehydrogenase

Probab=97.08  E-value=0.0038  Score=51.11  Aligned_cols=117  Identities=16%  Similarity=0.174  Sum_probs=63.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++.||||+|.+|..++..|+..|.       .++++|++...       ...+....++.......   ..+ ..+.   
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------~~~~g~~~Dl~d~~~~~---~~~-~~i~---   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------KALEGVVMELQDCAFPL---LKG-VVIT---   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------Cccceeeeehhhhcccc---cCC-cEEe---
Confidence            589999999999999999997652       48998874310       11111111111100000   000 0111   


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCCcEEEEec
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ--NYGRLVMTAS  151 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~vsS  151 (223)
                      ....+.+...|++|+.||....   ...+   -.+.++.|+.    +++.+.+.+.+.  +.+.+|++|-
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~---~g~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRK---PGME---RADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCC---cCCc---HHHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            1234556789999999996422   1223   3344555554    566666666665  3456666654

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.05  E-value=0.0028  Score=54.74  Aligned_cols=36  Identities=22%  Similarity=0.427  Sum_probs=32.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++++++|+|+ ||+|++++..|++.|+++++.+|
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R  363 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNR  363 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC
Confidence            3567899999996 69999999999999999998876

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.03  E-value=0.0026  Score=46.96  Aligned_cols=37  Identities=30%  Similarity=0.478  Sum_probs=33.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++.||+++|+|++.-+|..+++.|.++|++|.++.|
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r   76 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHS   76 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC
Confidence            3688999999999777899999999999999988865

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.03  E-value=0.012  Score=48.57  Aligned_cols=75  Identities=21%  Similarity=0.316  Sum_probs=47.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+++++|+|+ |++|...++.+...|+ +|+++++         ++++.+.    .++.+.....+..+. +.    .++
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~---------~~~~~~~----a~~lGa~~vi~~~~~-~~----~~~  229 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADV---------SPRSLSL----AREMGADKLVNPQND-DL----DHY  229 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeC---------CHHHHHH----HHHcCCcEEecCCcc-cH----HHH
Confidence            5789999986 8999999988888898 5777765         4444332    223343333333322 22    223


Q ss_pred             HHhcCCccEEEeccC
Q psy16220         87 LENFGRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~~id~li~~ag  101 (223)
                      .+..+.+|++|.++|
T Consensus       230 ~~~~g~~D~vid~~G  244 (343)
T PRK09880        230 KAEKGYFDVSFEVSG  244 (343)
T ss_pred             hccCCCCCEEEECCC
Confidence            233356999999988

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.02  E-value=0.029  Score=45.62  Aligned_cols=112  Identities=17%  Similarity=0.247  Sum_probs=64.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC----CccccccCCccchHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----GKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~   84 (223)
                      ++.|+|+ |++|.++|..|+.+|  ..++++++         +....+....++....    .......   .+      
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~---------~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~------   62 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDI---------NEEKAEGEALDLEDALAFLPSPVKIKA---GD------   62 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC---------CcchhhHhHhhHHHHhhccCCCeEEEc---CC------
Confidence            6788896 899999999999999  57999988         3343444444443221    1101111   11      


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCc
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNS  153 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~  153 (223)
                        .+.+...|++|+++|....   ...+.   .+.++.|..-    ++.+.+.+.+.. .+.++++|-..
T Consensus        63 --~~~l~~aDIVIitag~~~~---~g~~R---~dll~~N~~i----~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          63 --YSDCKDADIVVITAGAPQK---PGETR---LDLLEKNAKI----MKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             --HHHhCCCCEEEEccCCCCC---CCCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEEecChH
Confidence              1223579999999986422   12233   3445555554    444444445433 46666666533

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.00  E-value=0.0011  Score=41.39  Aligned_cols=33  Identities=27%  Similarity=0.477  Sum_probs=23.1

Q ss_pred             CC-cEEEEEcCCCchHHH--HHHHHHHcCCeEEEEcc
Q psy16220          8 DG-RVAIVTGAGAGLGRS--YALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~-~~~lItGa~~giG~a--~a~~l~~~G~~vv~~~r   41 (223)
                      +| |+|||+|+|+|.|++  ++..| ..|++.+-++.
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f   72 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF   72 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence            55 899999999999999  55555 66888777765

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.95  E-value=0.0057  Score=49.22  Aligned_cols=34  Identities=24%  Similarity=0.431  Sum_probs=31.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++++|+|+++++|+++++.+...|++++++++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~  172 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAG  172 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcC
Confidence            5789999999999999999999999999988865

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.92  E-value=0.0066  Score=48.60  Aligned_cols=78  Identities=23%  Similarity=0.357  Sum_probs=54.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc-ccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP-NYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   83 (223)
                      +.+++.++|.|++ |-+++++..|++.|+ +++++.|         +.++.+++.+.+.+.+..+.. ...+....+   
T Consensus       123 ~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NR---------t~~ra~~La~~~~~~~~~~~~~~~~~~~~~~---  189 (283)
T COG0169         123 DVTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNR---------TRERAEELADLFGELGAAVEAAALADLEGLE---  189 (283)
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHhhhccccccccccccccccc---
Confidence            3457899999876 899999999999995 7999876         788888888888765531111 111111111   


Q ss_pred             HHHHHhcCCccEEEeccCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILR  104 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~  104 (223)
                              ..|+|||+....-
T Consensus       190 --------~~dliINaTp~Gm  202 (283)
T COG0169         190 --------EADLLINATPVGM  202 (283)
T ss_pred             --------ccCEEEECCCCCC
Confidence                    5899999987543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.90  E-value=0.0031  Score=48.01  Aligned_cols=36  Identities=33%  Similarity=0.559  Sum_probs=33.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++||+++|+|.+ .+|+.+|+.|.+.|++|++.++
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~   59 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADI   59 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcC
Confidence            46889999999996 8999999999999999999876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.86  E-value=0.014  Score=47.54  Aligned_cols=34  Identities=24%  Similarity=0.245  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.++||.|+++++|.++++.+.+.|++|+.+++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~  178 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAG  178 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Confidence            4689999999999999999999999999888765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.84  E-value=0.0089  Score=49.28  Aligned_cols=38  Identities=21%  Similarity=0.343  Sum_probs=33.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQ   44 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~   44 (223)
                      .+++++|+|+|+ ||+|..+|+.|++.|. +++++|++..
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~v   59 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYV   59 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcc
Confidence            467889999997 5899999999999997 8999988653

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.84  E-value=0.033  Score=39.91  Aligned_cols=113  Identities=19%  Similarity=0.294  Sum_probs=64.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc--ccccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA--VPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   86 (223)
                      ++.|+|++|.+|.++|..|...+  ..++++|+         ++...+....++.......  ......         ..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~---------~~~~~~g~a~Dl~~~~~~~~~~~~i~~---------~~   63 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDI---------NEDKAEGEALDLSHASAPLPSPVRITS---------GD   63 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEES---------SHHHHHHHHHHHHHHHHGSTEEEEEEE---------SS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEecc---------Ccccceeeehhhhhhhhhccccccccc---------cc
Confidence            68899999999999999999886  46999987         5444444443443211111  011100         11


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEec
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTAS  151 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  151 (223)
                      .+.+...|++|.+||....   ...+   -.+.++.|..-.-.+.+.    +.+. +.+.++.++-
T Consensus        64 ~~~~~~aDivvitag~~~~---~g~s---R~~ll~~N~~i~~~~~~~----i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   64 YEALKDADIVVITAGVPRK---PGMS---RLDLLEANAKIVKEIAKK----IAKYAPDAIVIVVTN  119 (141)
T ss_dssp             GGGGTTESEEEETTSTSSS---TTSS---HHHHHHHHHHHHHHHHHH----HHHHSTTSEEEE-SS
T ss_pred             ccccccccEEEEecccccc---cccc---HHHHHHHhHhHHHHHHHH----HHHhCCccEEEEeCC
Confidence            2345679999999996432   1223   344456665544444444    4443 3456666554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.81  E-value=0.0054  Score=49.21  Aligned_cols=37  Identities=30%  Similarity=0.520  Sum_probs=33.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++||.++|.|+++-.|+.++..|+++|++|.++.|
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            5689999999999988999999999999999988854

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.79  E-value=0.0048  Score=49.82  Aligned_cols=77  Identities=21%  Similarity=0.184  Sum_probs=56.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ..++|-||+|.-|.-+|++|+++|.+-++.+|         +..++..+...+........+.+      .+.++   +.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgR---------s~~kl~~l~~~LG~~~~~~p~~~------p~~~~---~~   68 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGR---------SSAKLDALRASLGPEAAVFPLGV------PAALE---AM   68 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccC---------CHHHHHHHHHhcCccccccCCCC------HHHHH---HH
Confidence            46899999999999999999999999988866         88888877776644322222222      23333   33


Q ss_pred             cCCccEEEeccCCCC
Q psy16220         90 FGRIDIVINNAGILR  104 (223)
Q Consensus        90 ~~~id~li~~ag~~~  104 (223)
                      ....++|+||+|.+.
T Consensus        69 ~~~~~VVlncvGPyt   83 (382)
T COG3268          69 ASRTQVVLNCVGPYT   83 (382)
T ss_pred             HhcceEEEecccccc
Confidence            457899999999654

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.77  E-value=0.012  Score=44.85  Aligned_cols=92  Identities=17%  Similarity=0.219  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-CC---------ChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-GK---------SSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++++|.|+ ||+|..+++.|+..|. ++.++|.+..+..+ .|         ...+.+...+.+++....+.....
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            467889999984 5999999999999997 79999876432211 11         134445555566655444333221


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccC
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      +..-...   .+.+.+...|++|.+..
T Consensus        97 ~~~i~~~---~~~~~~~~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTAE---NLELLINNVDLVLDCTD  120 (202)
T ss_pred             hhcCCHH---HHHHHHhCCCEEEECCC
Confidence            1110111   12223456888888764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.76  E-value=0.078  Score=43.34  Aligned_cols=119  Identities=13%  Similarity=0.218  Sum_probs=68.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +-.++++.|+|+ |.+|.++|..|+.+|.  .++++|+         ++........++....... .. .....  .  
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~---------~~~~~~g~~~Dl~~~~~~~-~~-~~i~~--~--   66 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDI---------NKEKAEGDAMDLSHAVPFT-SP-TKIYA--G--   66 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC---------CCchhHHHHHHHHhhcccc-CC-eEEEe--C--
Confidence            456789999998 9999999999998886  6999987         4443333333443221100 00 01110  0  


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASN  152 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~  152 (223)
                        -.+.+..-|++|.+||.... +  ..+.   .+.++.|..    +++.+.+.+.+. ..+.++++|-.
T Consensus        67 --~~~~~~~adivIitag~~~k-~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvsNP  124 (315)
T PRK00066         67 --DYSDCKDADLVVITAGAPQK-P--GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVASNP  124 (315)
T ss_pred             --CHHHhCCCCEEEEecCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCc
Confidence              12335689999999997422 1  2233   344555554    344444445543 34666666643

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.73  E-value=0.0093  Score=49.20  Aligned_cols=37  Identities=24%  Similarity=0.414  Sum_probs=32.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      .+++++|+|+|+ ||+|..+|+.|++.|. ++.++|.+.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            467789999998 6999999999999998 899998864

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.73  E-value=0.012  Score=46.27  Aligned_cols=92  Identities=14%  Similarity=0.181  Sum_probs=53.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-C---------CChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-G---------KSSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.....+ .         -...+.+...+.+.+....+.....
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            467889999998 8999999999999996 78888775543211 1         1123444445556555444433221


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccC
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      +..-.+...+   +.+...|++|.+..
T Consensus       108 ~~~i~~~~~~---~~~~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLDDDELA---ALIAGHDLVLDCTD  131 (245)
T ss_pred             eccCCHHHHH---HHHhcCCEEEecCC
Confidence            1110011122   22346788887764

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.72  E-value=0.013  Score=49.21  Aligned_cols=48  Identities=23%  Similarity=0.441  Sum_probs=39.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIR   63 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~   63 (223)
                      +++++++||+|++ -+|.-+|++|+++| .+|+++-|         +.++.+++.+.+.
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNR---------T~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANR---------TLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcC---------CHHHHHHHHHHhC
Confidence            3789999999986 79999999999999 46777755         7777777777665

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.71  E-value=0.028  Score=48.79  Aligned_cols=33  Identities=27%  Similarity=0.158  Sum_probs=29.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|+|++ .+|+..+..+...|++|+++|+
T Consensus       164 pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a~D~  196 (509)
T PRK09424        164 PPAKVLVIGAG-VAGLAAIGAAGSLGAIVRAFDT  196 (509)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEeC
Confidence            46789999886 8999999999999999999887

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.69  E-value=0.013  Score=47.79  Aligned_cols=78  Identities=24%  Similarity=0.342  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+||++++|..+++.+...|++|+.+++         +.++.+.    +++.+....++..+ .+....+.+..
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~---------s~~~~~~----l~~~Ga~~vi~~~~-~~~~~~v~~~~  208 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAG---------SDDKVAW----LKELGFDAVFNYKT-VSLEEALKEAA  208 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHH----HHHcCCCEEEeCCC-ccHHHHHHHHC
Confidence            4789999999999999998888889999888764         3433332    23333332333322 22222222222


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .  +.+|+++.+.|
T Consensus       209 ~--~gvd~vld~~g  220 (329)
T cd08294         209 P--DGIDCYFDNVG  220 (329)
T ss_pred             C--CCcEEEEECCC
Confidence            1  46999998877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.67  E-value=0.011  Score=48.43  Aligned_cols=114  Identities=11%  Similarity=0.114  Sum_probs=64.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH---
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD---   80 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   80 (223)
                      ++.|+|++|.+|.+++..|+..|.       .++++|++....       ..+.           ...|+.|.....   
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g-----------~~~Dl~d~~~~~~~~   62 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEG-----------VVMELMDCAFPLLDG   62 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccce-----------eEeehhcccchhcCc
Confidence            378999999999999999997653       588998743221       0110           011111111000   


Q ss_pred             -HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCCcEEEEecC
Q psy16220         81 -KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ--NYGRLVMTASN  152 (223)
Q Consensus        81 -~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~vsS~  152 (223)
                       .......+.+...|++|++||....      ..+++.+.++.|+.    +++.+.+.+.+.  +.+.+|++|-.
T Consensus        63 ~~~~~~~~~~~~~aDiVVitAG~~~~------~~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsNP  127 (324)
T TIGR01758        63 VVPTHDPAVAFTDVDVAILVGAFPRK------EGMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGNP  127 (324)
T ss_pred             eeccCChHHHhCCCCEEEEcCCCCCC------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCc
Confidence             0000123455789999999996422      12335666777765    455555555665  34666666643

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.66  E-value=0.013  Score=50.63  Aligned_cols=80  Identities=24%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ..+++++++|+|+ |++|.++|+.|+++|++|+++++.        +........+.+++.+..+.......        
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~--------~~~~~~~~~~~l~~~gv~~~~~~~~~--------   74 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDG--------DDERHRALAAILEALGATVRLGPGPT--------   74 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC--------chhhhHHHHHHHHHcCCEEEECCCcc--------
Confidence            3467889999997 679999999999999999998752        22222333445555554433211110        


Q ss_pred             HHHHhcCCccEEEeccCCCCC
Q psy16220         85 TALENFGRIDIVINNAGILRD  105 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~  105 (223)
                          .....|.+|.++|+...
T Consensus        75 ----~~~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         75 ----LPEDTDLVVTSPGWRPD   91 (480)
T ss_pred             ----ccCCCCEEEECCCcCCC
Confidence                12357889988887543

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.65  E-value=0.017  Score=48.22  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=29.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.++.++|+|+ |.+|+..++.+...|++|++++|
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~  198 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDI  198 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC
Confidence            35567899987 68999999999999999999977

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.62  E-value=0.034  Score=45.60  Aligned_cols=75  Identities=24%  Similarity=0.228  Sum_probs=47.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ +++|..+++.+...|++ |+++++         ++++.+.    +.+.+.....+..+.. .    +++
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~---------~~~~~~~----~~~~ga~~~i~~~~~~-~----~~~  223 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDP---------SPERLEL----AKALGADFVINSGQDD-V----QEI  223 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHH----HHHhCCCEEEcCCcch-H----HHH
Confidence            4789999986 89999999988889999 888754         4444332    2222333333333222 2    223


Q ss_pred             HHhc--CCccEEEeccC
Q psy16220         87 LENF--GRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~--~~id~li~~ag  101 (223)
                      .+..  .++|++|.+.|
T Consensus       224 ~~~~~~~~~d~vid~~g  240 (339)
T cd08239         224 RELTSGAGADVAIECSG  240 (339)
T ss_pred             HHHhCCCCCCEEEECCC
Confidence            2222  26999999987

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK14968 putative methyltransferase; Provisional

Probab=96.62  E-value=0.034  Score=41.44  Aligned_cols=121  Identities=17%  Similarity=0.211  Sum_probs=63.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   84 (223)
                      +++++|-.|++.|.   ++..+++++.+++.+++         ++...+...+.+...+..   +.+...|.      .+
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~---------s~~~~~~a~~~~~~~~~~~~~~~~~~~d~------~~   84 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDI---------NPYAVECAKCNAKLNNIRNNGVEVIRSDL------FE   84 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEEC---------CHHHHHHHHHHHHHcCCCCcceEEEeccc------cc
Confidence            56789999987766   45555666899999876         555554444444433221   22222222      11


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhH---HHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG---AFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~---~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      .+.+  ..+|.++.|.......+.... .+.+...+.....+   .-.+++.+.+.++..  |.++++.+
T Consensus        85 ~~~~--~~~d~vi~n~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~g--G~~~~~~~  149 (188)
T PRK14968         85 PFRG--DKFDVILFNPPYLPTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKPG--GRILLLQS  149 (188)
T ss_pred             cccc--cCceEEEECCCcCCCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCCC--eEEEEEEc
Confidence            1211  269999999876543322221 22222222222222   233566666666654  67666543

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.61  E-value=0.018  Score=43.81  Aligned_cols=36  Identities=25%  Similarity=0.519  Sum_probs=31.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG   42 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~   42 (223)
                      .+++++++|.|+ ||+|..+|..|++.|. +++++|++
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            467789999998 5899999999999998 69999886

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>KOG0023|consensus

Probab=96.59  E-value=0.016  Score=46.67  Aligned_cols=75  Identities=21%  Similarity=0.292  Sum_probs=46.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      -|+++-|+|+.| ||.--++.-.+.|++|+++++         ...+.++..+.+   +.....+...+.+   ..+++.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~---------~~~kkeea~~~L---GAd~fv~~~~d~d---~~~~~~  244 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVIST---------SSKKKEEAIKSL---GADVFVDSTEDPD---IMKAIM  244 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeC---------CchhHHHHHHhc---CcceeEEecCCHH---HHHHHH
Confidence            589999999998 987666666677999999987         444444444444   4445555553332   223332


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      +   ..|++++++.
T Consensus       245 ~---~~dg~~~~v~  255 (360)
T KOG0023|consen  245 K---TTDGGIDTVS  255 (360)
T ss_pred             H---hhcCcceeee
Confidence            2   2455555554

>KOG2733|consensus

Probab=96.53  E-value=0.0092  Score=48.67  Aligned_cols=77  Identities=17%  Similarity=0.263  Sum_probs=57.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-------cccccCCccch
Q psy16220         11 VAIVTGAGAGLGRSYALLLAE----RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-------AVPNYNSVVDG   79 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~   79 (223)
                      .++|-||+|.-|.-++.++.+    .|.++.+.+|         +++++++.++.+.+....       +.+|.+|..+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGR---------n~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl   77 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGR---------NEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASL   77 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecC---------CHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHH
Confidence            689999999999999999998    7888999876         899999988887765432       22344444433


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGIL  103 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~  103 (223)
                      ....+       +..+||||+|..
T Consensus        78 ~emak-------~~~vivN~vGPy   94 (423)
T KOG2733|consen   78 DEMAK-------QARVIVNCVGPY   94 (423)
T ss_pred             HHHHh-------hhEEEEeccccc
Confidence            33222       468999999964

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.53  E-value=0.018  Score=47.11  Aligned_cols=72  Identities=26%  Similarity=0.333  Sum_probs=50.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      |++++|+|.+ |+|...++.....|++|+.++|         ++++.+.    .++.+.....+..|.+..+.    +.+
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~---------~~~K~e~----a~~lGAd~~i~~~~~~~~~~----~~~  228 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITR---------SEEKLEL----AKKLGADHVINSSDSDALEA----VKE  228 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeC---------ChHHHHH----HHHhCCcEEEEcCCchhhHH----hHh
Confidence            7899999999 9999888888889999999987         4444432    23335555555553333333    222


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                      .   +|++|.+++
T Consensus       229 ~---~d~ii~tv~  238 (339)
T COG1064         229 I---ADAIIDTVG  238 (339)
T ss_pred             h---CcEEEECCC
Confidence            2   999999987

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.50  E-value=0.013  Score=50.22  Aligned_cols=35  Identities=34%  Similarity=0.538  Sum_probs=31.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+|+++|+|.+ ++|.++|+.|+++|+.|++.+.
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~   36 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDA   36 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeC
Confidence            3678999999986 9999999999999999999875

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.50  E-value=0.086  Score=43.55  Aligned_cols=33  Identities=36%  Similarity=0.531  Sum_probs=29.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|.+++|.|+ +++|..+++.+...|++|+++++
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~  198 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDI  198 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcC
Confidence            4789999999 99999999988889999888865

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG1196|consensus

Probab=96.47  E-value=0.053  Score=43.40  Aligned_cols=107  Identities=21%  Similarity=0.243  Sum_probs=67.6

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      -+|++++|.||+|..|+-+-+...-.||+|+-.+=         +.++..-+..++   +....++.-++.+.++++++.
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaG---------S~EKv~ll~~~~---G~d~afNYK~e~~~~~aL~r~  219 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAG---------SKEKVDLLKTKF---GFDDAFNYKEESDLSAALKRC  219 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecC---------ChhhhhhhHhcc---CCccceeccCccCHHHHHHHh
Confidence            35789999999999998766665567998887642         444433332222   444445555555556655553


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      ..  ..||+.+-|.|.    .                      +..+.+..|+.+  |||+.++-++.+
T Consensus       220 ~P--~GIDiYfeNVGG----~----------------------~lDavl~nM~~~--gri~~CG~ISqY  258 (343)
T KOG1196|consen  220 FP--EGIDIYFENVGG----K----------------------MLDAVLLNMNLH--GRIAVCGMISQY  258 (343)
T ss_pred             CC--CcceEEEeccCc----H----------------------HHHHHHHhhhhc--cceEeeeeehhc
Confidence            22  379999999983    1                      223344445555  899998866543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.43  E-value=0.039  Score=42.60  Aligned_cols=31  Identities=26%  Similarity=0.422  Sum_probs=29.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.|+||+|.+|.++++.|++.|++|++.+|
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r   32 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSR   32 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence            5889999999999999999999999999887

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.42  E-value=0.014  Score=49.58  Aligned_cols=35  Identities=23%  Similarity=0.485  Sum_probs=31.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r   41 (223)
                      .+.+++++|+|+ |.+|..+++.|.+.| .+|++++|
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~r  212 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANR  212 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeC
Confidence            367899999997 999999999999999 68999877

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.40  E-value=0.022  Score=45.89  Aligned_cols=86  Identities=16%  Similarity=0.203  Sum_probs=50.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++|++||.|+ ||-+++++..|+..|+ ++.++.|+..      ..++.+.+.+.+...... .....+..+    .
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~------~~~ka~~la~~~~~~~~~-~~~~~~~~~----~  187 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE------FFDKALAFAQRVNENTDC-VVTVTDLAD----Q  187 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc------HHHHHHHHHHHhhhccCc-eEEEechhh----h
Confidence            3467899999998 4669999999999997 7888877211      123555555555432211 111111111    1


Q ss_pred             HHHHHhcCCccEEEeccCC
Q psy16220         84 QTALENFGRIDIVINNAGI  102 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~  102 (223)
                      +.+.+.....|+|||+...
T Consensus       188 ~~l~~~~~~aDivINaTp~  206 (288)
T PRK12749        188 QAFAEALASADILTNGTKV  206 (288)
T ss_pred             hhhhhhcccCCEEEECCCC
Confidence            1122234578999998754

>PLN00203 glutamyl-tRNA reductase

Probab=96.38  E-value=0.013  Score=50.93  Aligned_cols=35  Identities=23%  Similarity=0.361  Sum_probs=31.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      ++.+++++|+|+ |.+|..+++.|...|+ +|+++.|
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nR  298 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNR  298 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            377899999999 9999999999999997 6888877

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.34  E-value=0.0081  Score=43.88  Aligned_cols=38  Identities=26%  Similarity=0.386  Sum_probs=33.7

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      |..++++|+.++|.||+ .+|...++.|++.|++|++++
T Consensus         6 P~~l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          6 PLMFNLHNKVVVIIGGG-KIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             ceEEEcCCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEc
Confidence            45678899999999976 899999999999999999984

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.34  E-value=0.034  Score=39.75  Aligned_cols=87  Identities=16%  Similarity=0.176  Sum_probs=49.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCC----------CCCChhhhhHHHHHHHHhCCccccccCCccch
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDG----------DGKSSKAADTVVAEIRSKGGKAVPNYNSVVDG   79 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (223)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+.....          ..-...+.+...+.+++....+.....+..-.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3788887 7999999999999998 6888876543221          11122344445555555544333222111100


Q ss_pred             HHHHHHHHHhcCCccEEEeccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag  101 (223)
                      ...   ..+.+.+.|++|.+..
T Consensus        80 ~~~---~~~~~~~~diVi~~~d   98 (143)
T cd01483          80 EDN---LDDFLDGVDLVIDAID   98 (143)
T ss_pred             hhh---HHHHhcCCCEEEECCC
Confidence            110   1233457888887775

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.34  E-value=0.016  Score=49.33  Aligned_cols=35  Identities=31%  Similarity=0.524  Sum_probs=30.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      ++.+++++|+|+ |.+|+.+++.|...|+ +|++++|
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r  214 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANR  214 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeC
Confidence            367899999987 8999999999999997 7888877

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.31  E-value=0.0084  Score=47.40  Aligned_cols=32  Identities=19%  Similarity=0.276  Sum_probs=28.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      .+||+|||+- |+.+++.|.++|++|++..+..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~   33 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTS   33 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccC
Confidence            6999999998 9999999999999999887643

This enzyme was found to be a monomer by gel filtration.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.31  E-value=0.022  Score=47.70  Aligned_cols=92  Identities=18%  Similarity=0.232  Sum_probs=52.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-C---------CChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-G---------KSSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|++.....+ .         -...+.+...+.+.+....+.....
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            467788998966 6999999999999998 68888875322110 0         0133455555566555443322111


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccC
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      +..-....++++   +...|+||++..
T Consensus       211 ~~~~~~~~~~~~---~~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTSDNVEAL---LQDVDVVVDGAD  234 (376)
T ss_pred             eccCChHHHHHH---HhCCCEEEECCC
Confidence            110001112222   235788888775

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.29  E-value=0.015  Score=41.49  Aligned_cols=38  Identities=34%  Similarity=0.514  Sum_probs=35.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|.|.+.-+|+.++..|.++|+.|.++++
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~   60 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDW   60 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCC
Confidence            36789999999999999999999999999999999864

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.28  E-value=0.028  Score=45.36  Aligned_cols=34  Identities=21%  Similarity=0.361  Sum_probs=31.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++++++|+|+++++|+++++.+...|++++++++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~  177 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTR  177 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcC
Confidence            4679999999999999999999999999998865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.28  E-value=0.048  Score=46.30  Aligned_cols=36  Identities=33%  Similarity=0.561  Sum_probs=32.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+.|++++|+|. |.||+.+|+.+...|++|+++++
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~  243 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEV  243 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            4568999999997 58999999999999999999876

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.27  E-value=0.039  Score=44.98  Aligned_cols=121  Identities=17%  Similarity=0.165  Sum_probs=64.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe--EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGAS--VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|++|.+|..++..|+..|..  |++++++....   +-......+.+.+...+.......+  .+        .+
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~---~l~~~~~dl~d~~~~~~~~~~i~~~--~d--------~~   68 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLE---KLKGLRLDIYDALAAAGIDAEIKIS--SD--------LS   68 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECccccc---ccccccchhhhchhccCCCcEEEEC--CC--------HH
Confidence            6899999999999999999999864  89998832100   0001111111111111111100000  01        12


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      .+...|++|.++|....   ...+   -.+.++.|+.-...+.+.+.+.   .+.+.+|++++..
T Consensus        69 ~l~~aDiViitag~p~~---~~~~---r~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv  124 (309)
T cd05294          69 DVAGSDIVIITAGVPRK---EGMS---RLDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV  124 (309)
T ss_pred             HhCCCCEEEEecCCCCC---CCCC---HHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence            24679999999996322   1222   2344555665555555544332   2346777777644

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.26  E-value=0.028  Score=43.19  Aligned_cols=37  Identities=27%  Similarity=0.431  Sum_probs=31.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~   43 (223)
                      .+++++++|.|+ ||+|..+++.|+..|.. ++++|.+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   62 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDV   62 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            467789999996 69999999999999975 88888764

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.22  E-value=0.0042  Score=41.91  Aligned_cols=36  Identities=31%  Similarity=0.411  Sum_probs=30.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++++|+.+||+|| |.+|..=++.|++.|++|.+++.
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~   38 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISP   38 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEES
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECC
Confidence            5789999999999 79999999999999999999965

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.21  E-value=0.027  Score=45.38  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++++|+|+++++|.++++.+...|++|+++.+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~  172 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAG  172 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeC
Confidence            4789999999999999999999999999988865

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.14  E-value=0.0095  Score=42.85  Aligned_cols=43  Identities=28%  Similarity=0.424  Sum_probs=34.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK   65 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~   65 (223)
                      |+++|+++.+|+++|..|.++|.+|+..           +.+..+.+..++...
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~-----------~~~~y~~lk~~~~~~   43 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML-----------SKERYESLKSEAPEE   43 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe-----------cHHHHHHHHHHcCHH
Confidence            5789999999999999999999999997           445555555555443

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.13  E-value=0.046  Score=38.71  Aligned_cols=89  Identities=18%  Similarity=0.230  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-C---------CChhhhhHHHHHHHHhCCccccccCCcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-G---------KSSKAADTVVAEIRSKGGKAVPNYNSVV   77 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (223)
                      +++++|.|++ ++|..+++.|+..|. ++.++|...-...+ .         -...+.+.+.+.+.+....+........
T Consensus         2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGAG-GVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEESTS-HHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECcC-HHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            4678888775 999999999999998 68888876543211 1         1224455566666665544433221111


Q ss_pred             chHHHHHHHHHhcCCccEEEeccC
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      -.+...+++.   ...|++|.+..
T Consensus        81 ~~~~~~~~~~---~~~d~vi~~~d  101 (135)
T PF00899_consen   81 IDEENIEELL---KDYDIVIDCVD  101 (135)
T ss_dssp             CSHHHHHHHH---HTSSEEEEESS
T ss_pred             cccccccccc---cCCCEEEEecC
Confidence            1122223332   35788887754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.13  E-value=0.096  Score=43.69  Aligned_cols=77  Identities=30%  Similarity=0.339  Sum_probs=46.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+.++||.|+ +++|..+++.+...|+ +|+++++         ++.+.+..    ++.+.....+..+ .   +..+++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~---------~~~r~~~a----~~~Ga~~~i~~~~-~---~~~~~i  252 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDL---------NEDKLALA----RELGATATVNAGD-P---NAVEQV  252 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcC---------CHHHHHHH----HHcCCceEeCCCc-h---hHHHHH
Confidence            4679999985 8999999888888899 5877754         44443322    2223322223222 1   223333


Q ss_pred             HHhc-CCccEEEeccCC
Q psy16220         87 LENF-GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~-~~id~li~~ag~  102 (223)
                      .+.. +.+|++|.+.|.
T Consensus       253 ~~~~~~g~d~vid~~G~  269 (371)
T cd08281         253 RELTGGGVDYAFEMAGS  269 (371)
T ss_pred             HHHhCCCCCEEEECCCC
Confidence            3222 369999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.12  E-value=0.083  Score=45.89  Aligned_cols=32  Identities=25%  Similarity=0.098  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.+++|.|+ |.+|...+..+...|++|+++++
T Consensus       164 ~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~  195 (511)
T TIGR00561       164 PAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDT  195 (511)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            468999996 79999999999999999999876

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.11  E-value=0.067  Score=45.30  Aligned_cols=36  Identities=39%  Similarity=0.678  Sum_probs=32.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+.|++++|.|++ .||+.+++.+...|++|+++++
T Consensus       198 ~~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~  233 (413)
T cd00401         198 VMIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEV  233 (413)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEEC
Confidence            44689999999987 7999999999999999999876

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.09  E-value=0.019  Score=46.00  Aligned_cols=38  Identities=26%  Similarity=0.449  Sum_probs=35.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|+|.+.-+|+.++..|.++|++|+++.+
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s  190 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS  190 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            45789999999999999999999999999999999864

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.09  E-value=0.052  Score=39.82  Aligned_cols=81  Identities=20%  Similarity=0.184  Sum_probs=47.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHH----------HHHHHhCCccccccCCccchH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVV----------AEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      ++-++|- |-+|..+|+.|+++|++|.+.+|         +.++.+++.          .++-+.-..+...+.+....+
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~---------~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~   72 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDR---------SPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVE   72 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEES---------SHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHH
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeecc---------chhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhh
Confidence            6777877 69999999999999999999987         444444332          222222233344555556566


Q ss_pred             HHHHH--HHHhcCCccEEEeccC
Q psy16220         81 KIVQT--ALENFGRIDIVINNAG  101 (223)
Q Consensus        81 ~~~~~--~~~~~~~id~li~~ag  101 (223)
                      +++..  +.....+=+++|.+..
T Consensus        73 ~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   73 AVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhhhhHHhhccccceEEEecCC
Confidence            66665  5544444455555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.09  E-value=0.052  Score=45.28  Aligned_cols=79  Identities=18%  Similarity=0.230  Sum_probs=47.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   85 (223)
                      .|.++||+|+ ++||...++.+...|+ +|+.+++         ++++.+..    .+.+.....+..+ ..+....+.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~---------~~~~~~~a----~~~Ga~~~i~~~~~~~~~~~~v~~  250 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDI---------NPAKFELA----KKLGATDCVNPNDYDKPIQEVIVE  250 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHHH----HHhCCCeEEcccccchhHHHHHHH
Confidence            4789999985 8999999988888898 6888765         44443322    2223322333322 1122222333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       251 ~~~--~g~d~vid~~G~  265 (368)
T TIGR02818       251 ITD--GGVDYSFECIGN  265 (368)
T ss_pred             HhC--CCCCEEEECCCC
Confidence            222  379999999883

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.02  E-value=0.0067  Score=45.26  Aligned_cols=38  Identities=24%  Similarity=0.294  Sum_probs=32.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      ...+.|+++.|.|. |.||+++|+.+...|++|+..+|.
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~   68 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRS   68 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESS
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEeccc
Confidence            34678999999976 799999999999999999999873

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.01  E-value=0.058  Score=34.36  Aligned_cols=56  Identities=25%  Similarity=0.286  Sum_probs=37.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      ++|.|| |.+|..+|..|.+.|.+|.++.+.+... ..-++.......+.+++.+..+
T Consensus         2 vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~~-~~~~~~~~~~~~~~l~~~gV~v   57 (80)
T PF00070_consen    2 VVVIGG-GFIGIELAEALAELGKEVTLIERSDRLL-PGFDPDAAKILEEYLRKRGVEV   57 (80)
T ss_dssp             EEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSSS-TTSSHHHHHHHHHHHHHTTEEE
T ss_pred             EEEECc-CHHHHHHHHHHHHhCcEEEEEeccchhh-hhcCHHHHHHHHHHHHHCCCEE
Confidence            455554 5999999999999999999998865543 2233344444455555554433

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.99  E-value=0.055  Score=42.42  Aligned_cols=92  Identities=15%  Similarity=0.181  Sum_probs=53.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-C---------CChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-G---------KSSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++|+|.|++ |+|..+++.|+..|. +++++|.+..+..+ .         -...+.+...+.+.+.+..+.....
T Consensus        21 ~L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            4667889988775 999999999999996 68888876544321 1         1123344445556555544433222


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccC
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      +..-.+..   +.+.+...|++|.+..
T Consensus       100 ~~~i~~~~---~~~~~~~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDDAE---LAALIAEHDIVVDCTD  123 (240)
T ss_pred             eccCCHHH---HHHHhhcCCEEEEcCC
Confidence            11100111   1222345787777765

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.97  E-value=0.23  Score=42.48  Aligned_cols=116  Identities=12%  Similarity=0.094  Sum_probs=67.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-------CC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER-------GA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~-------G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      ++.|+|++|.+|.++|-.|+..       |.  +++++++         +.+..+...-++...-....   .+. .+..
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~---------~~~~a~G~amDL~daa~~~~---~~v-~i~~  168 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSER---------SKQALEGVAMELEDSLYPLL---REV-SIGI  168 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcC---------CcchhHHHHHHHHHhhhhhc---Cce-EEec
Confidence            7899999999999999999987       54  6888877         44444433333332210110   010 0000


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh--cCCCcEEEEecC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK--QNYGRLVMTASN  152 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~iv~vsS~  152 (223)
                         .-.+.+..-|++|..||... ++  ..+   -.+.++.|..    +++.+.+.+.+  .+.+.||.+|-.
T Consensus       169 ---~~ye~~kdaDiVVitAG~pr-kp--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsNP  228 (444)
T PLN00112        169 ---DPYEVFQDAEWALLIGAKPR-GP--GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGNP  228 (444)
T ss_pred             ---CCHHHhCcCCEEEECCCCCC-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCCc
Confidence               01344568999999999632 21  223   3445566655    45555555566  345666666653

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.95  E-value=0.058  Score=41.82  Aligned_cols=76  Identities=24%  Similarity=0.213  Sum_probs=53.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +.|+.+|=+|+++|   .++..+|+.|++|..+|-         +++.++.......+.+..       .+-.....+++
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~---------se~~I~~Ak~ha~e~gv~-------i~y~~~~~edl  118 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDA---------SEKPIEVAKLHALESGVN-------IDYRQATVEDL  118 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecC---------ChHHHHHHHHhhhhcccc-------ccchhhhHHHH
Confidence            67899999999999   689999999999999986         555565554444443332       12223445555


Q ss_pred             HHhcCCccEEEeccC
Q psy16220         87 LENFGRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~~id~li~~ag  101 (223)
                      ...-+++|+|++.-=
T Consensus       119 ~~~~~~FDvV~cmEV  133 (243)
T COG2227         119 ASAGGQFDVVTCMEV  133 (243)
T ss_pred             HhcCCCccEEEEhhH
Confidence            555579999998764

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.95  E-value=0.2  Score=41.15  Aligned_cols=117  Identities=16%  Similarity=0.138  Sum_probs=64.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++.|+|++|.+|.++|..|+..|.       .++++|++..       .........++.......   ..+. .+.   
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~-------~~~a~g~a~Dl~~~~~~~---~~~~-~i~---   70 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPA-------MKALEGVAMELEDCAFPL---LAGV-VAT---   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCc-------ccccchHHHHHhhccccc---cCCc-EEe---
Confidence            688999999999999999998874       6899887321       111222222222111000   0010 010   


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEec
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTAS  151 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS  151 (223)
                      ....+.+..-|++|.+||... ++  ..+   -.+.++.|..    +.+.+.+.+.+..  .+.++++|-
T Consensus        71 ~~~~~~~~daDvVVitAG~~~-k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        71 TDPEEAFKDVDAALLVGAFPR-KP--GME---RADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCC-CC--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            112344567999999999632 21  233   3445566655    4455555555543  456666664

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.94  E-value=0.056  Score=44.94  Aligned_cols=64  Identities=19%  Similarity=0.203  Sum_probs=43.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-CC---------ChhhhhHHHHHHHHhCCccc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-GK---------SSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~   70 (223)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.....+ .|         ...+.+...+.+.+.+..+.
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~   99 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVK   99 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcE
Confidence            467889999988 6999999999999997 68888876533211 11         12445555566665555443

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.94  E-value=0.065  Score=41.63  Aligned_cols=92  Identities=17%  Similarity=0.165  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-C---------CChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-G---------KSSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++++|.|+ ||+|.++|+.|+..|. +++++|.+..+..+ .         -...+.+...+.+++....+..+..
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            467789999985 5999999999999997 67777665432211 1         1234455566666666554433322


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccC
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      +..-....+   .+.+...|++|.+..
T Consensus        97 ~~~i~~~~~---~~~~~~~DvVi~~~d  120 (228)
T cd00757          97 NERLDAENA---EELIAGYDLVLDCTD  120 (228)
T ss_pred             cceeCHHHH---HHHHhCCCEEEEcCC
Confidence            211111112   222345898888875

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.93  E-value=0.048  Score=44.21  Aligned_cols=34  Identities=32%  Similarity=0.423  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|.++||.|+++++|.++++.....|++++++.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~  172 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVR  172 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec
Confidence            4789999999999999999988899999988754

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.93  E-value=0.065  Score=44.66  Aligned_cols=78  Identities=15%  Similarity=0.208  Sum_probs=48.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCcc-chHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVV-DGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   85 (223)
                      .|.++||.|+ +++|...++.+...|+ +|+.+++         ++.+.+..    ++.+....++..+.+ +....+.+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~---------~~~~~~~~----~~lGa~~~i~~~~~~~~~~~~v~~  251 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDI---------NPDKFELA----KKFGATDCVNPKDHDKPIQQVLVE  251 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---------CHHHHHHH----HHcCCCEEEcccccchHHHHHHHH
Confidence            4789999975 8999999998888999 6888765         44444322    222333233333221 23333333


Q ss_pred             HHHhcCCccEEEeccC
Q psy16220         86 ALENFGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~~~~id~li~~ag  101 (223)
                      +..  +.+|+++.+.|
T Consensus       252 ~~~--~g~d~vid~~g  265 (368)
T cd08300         252 MTD--GGVDYTFECIG  265 (368)
T ss_pred             HhC--CCCcEEEECCC
Confidence            322  37999999887

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.93  E-value=0.018  Score=42.04  Aligned_cols=38  Identities=26%  Similarity=0.552  Sum_probs=30.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+++||+++|.|.+.-+|+.++..|.++|+.|.++..
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~   68 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHS   68 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-T
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccC
Confidence            35789999999999999999999999999999999854

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.91  E-value=0.13  Score=42.66  Aligned_cols=33  Identities=42%  Similarity=0.448  Sum_probs=28.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|++++|+|+ |++|...++.+...|++|+++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~  204 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNR  204 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            5789999986 89999999888888999998865

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.90  E-value=0.032  Score=41.71  Aligned_cols=30  Identities=37%  Similarity=0.478  Sum_probs=25.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.|.|+ |.+|+.+|..++..|++|++.++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~   30 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDR   30 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-S
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEEC
Confidence            4678888 89999999999999999999987

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.90  E-value=0.21  Score=38.84  Aligned_cols=148  Identities=14%  Similarity=0.122  Sum_probs=79.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCC----------CChhhhhHHHHHHHHhCCccccccCC
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDG----------KSSKAADTVVAEIRSKGGKAVPNYNS   75 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (223)
                      +++..|+|.|.+ |.|...+..|++.|. ++.++|-+.-...+.          -...+.+-..+.+..-+.++.....+
T Consensus        28 l~~~~V~VvGiG-GVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~  106 (263)
T COG1179          28 LKQAHVCVVGIG-GVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN  106 (263)
T ss_pred             HhhCcEEEEecC-chhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence            556788888875 999999999999997 688887643321110          01122223333344433333332222


Q ss_pred             ccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC--c
Q psy16220         76 VVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN--S  153 (223)
Q Consensus        76 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~--~  153 (223)
                      .-=.+...+++..  ..+|++|-+.-.                     +..-..|+..+    .+.   .|-+|||.  +
T Consensus       107 ~f~t~en~~~~~~--~~~DyvIDaiD~---------------------v~~Kv~Li~~c----~~~---ki~vIss~Gag  156 (263)
T COG1179         107 DFITEENLEDLLS--KGFDYVIDAIDS---------------------VRAKVALIAYC----RRN---KIPVISSMGAG  156 (263)
T ss_pred             hhhCHhHHHHHhc--CCCCEEEEchhh---------------------hHHHHHHHHHH----HHc---CCCEEeecccc
Confidence            2111222222222  257777765431                     11122333333    343   33444443  3


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy16220        154 GLLGNFGQANYSAAKMALVGLSNTLSIEGEKN  185 (223)
Q Consensus       154 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~  185 (223)
                      +.........-..+|.-.+-|++.++.+|.++
T Consensus       157 ~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~  188 (263)
T COG1179         157 GKLDPTRIQVADISKTIQDPLAAKVRRKLRKR  188 (263)
T ss_pred             CCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence            33333345566788999999999998888765

>PLN02740 Alcohol dehydrogenase-like

Probab=95.87  E-value=0.063  Score=45.00  Aligned_cols=79  Identities=18%  Similarity=0.203  Sum_probs=47.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   85 (223)
                      .|.++||.|+ +++|..+++.+...|+ +|+++++         ++.+.+..    ++.+.....+..+. .+....+.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~---------~~~r~~~a----~~~Ga~~~i~~~~~~~~~~~~v~~  263 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDI---------NPEKFEKG----KEMGITDFINPKDSDKPVHERIRE  263 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcC---------ChHHHHHH----HHcCCcEEEecccccchHHHHHHH
Confidence            4789999986 8999999998888999 5888765         44433322    22232222232221 122222333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       264 ~~~--~g~dvvid~~G~  278 (381)
T PLN02740        264 MTG--GGVDYSFECAGN  278 (381)
T ss_pred             HhC--CCCCEEEECCCC
Confidence            222  269999999983

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.84  E-value=0.086  Score=36.79  Aligned_cols=89  Identities=19%  Similarity=0.213  Sum_probs=51.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHH-cCCeEEEEccCCCCCCCCCChhh----------hhHHHHHHHHhCCccccccCCccch
Q psy16220         11 VAIVTGAGAGLGRSYALLLAE-RGASVVVNDLGGQRDGDGKSSKA----------ADTVVAEIRSKGGKAVPNYNSVVDG   79 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~   79 (223)
                      ++.|.|++|.+|+.+++.+.+ .|..++...........+++...          .....+++-.. ..+..|.+.....
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-~DVvIDfT~p~~~   80 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-ADVVIDFTNPDAV   80 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--SEEEEES-HHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-CCEEEEcCChHHh
Confidence            689999999999999999998 67775554332221111111111          11112233222 4566777766666


Q ss_pred             HHHHHHHHHhcCCccEEEeccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGI  102 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~  102 (223)
                      ...++...+.  ++..++-+.|+
T Consensus        81 ~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   81 YDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHH--T-EEEEE-SSS
T ss_pred             HHHHHHHHhC--CCCEEEECCCC
Confidence            6666666555  78889888885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.83  E-value=0.054  Score=44.39  Aligned_cols=34  Identities=21%  Similarity=0.213  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.|+++++|.++++.+...|++++++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~  179 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVR  179 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEc
Confidence            5789999999999999999999999999888765

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.82  E-value=0.061  Score=43.58  Aligned_cols=34  Identities=38%  Similarity=0.451  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|+|+++++|.++++.+...|++|+.+++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~  175 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAG  175 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            3678999999999999999998899999988865

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.78  E-value=0.058  Score=40.98  Aligned_cols=37  Identities=27%  Similarity=0.372  Sum_probs=30.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~   43 (223)
                      .+++.+++|.|+++ +|.++++.|+..|.. +.++|.+.
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            35678899998775 999999999999974 88887654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK05442 malate dehydrogenase; Provisional

Probab=95.77  E-value=0.11  Score=42.57  Aligned_cols=118  Identities=14%  Similarity=0.094  Sum_probs=64.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      +++.|+|++|.+|.++|..|+..|.       .++++|++...       ...+....++.........+.    .+.  
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~-------~~~~g~a~Dl~~~~~~~~~~~----~i~--   71 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPAL-------KALEGVVMELDDCAFPLLAGV----VIT--   71 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcc-------cccceeehhhhhhhhhhcCCc----EEe--
Confidence            3789999999999999999987664       68998874221       111111111111100000000    000  


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-c-CCCcEEEEec
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-Q-NYGRLVMTAS  151 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~g~iv~vsS  151 (223)
                       ....+.+..-|++|.+||... ++  ..+   -.+.++.|..    +++.+.+.+.+ . +.+.++.+|-
T Consensus        72 -~~~y~~~~daDiVVitaG~~~-k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         72 -DDPNVAFKDADVALLVGARPR-GP--GME---RKDLLEANGA----IFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             -cChHHHhCCCCEEEEeCCCCC-CC--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence             112345578999999999632 21  223   3445555554    55556666666 3 3466776664

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.76  E-value=0.028  Score=46.27  Aligned_cols=36  Identities=14%  Similarity=0.149  Sum_probs=33.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      .+.||++.|.|- |.||+.+|+.|...|++|+..+|.
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~  182 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRT  182 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCC
Confidence            578999999998 799999999999999999998874

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.73  E-value=0.019  Score=43.87  Aligned_cols=39  Identities=31%  Similarity=0.442  Sum_probs=34.6

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      |..++++||.+||.||+ .+|..-++.|++.|++|++++.
T Consensus         2 P~~l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp   40 (205)
T TIGR01470         2 PVFANLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAE   40 (205)
T ss_pred             CeEEEcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcC
Confidence            66678999999999976 7899999999999999999864

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.73  E-value=0.19  Score=41.41  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=27.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r   41 (223)
                      .+++++|+| .+++|..+++.+...|++ |+++++
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~  193 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDI  193 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            478999997 589999999888889997 566654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.71  E-value=0.043  Score=41.68  Aligned_cols=91  Identities=21%  Similarity=0.276  Sum_probs=52.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-C---------CChhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-G---------KSSKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++++|.|++ |+|.++++.|+..|. ++.++|.......+ .         ..+.+.+...+.+++.+..+.....
T Consensus        18 ~L~~s~VlIiG~g-glG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGLK-GLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcCC-HHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            4567899999865 599999999999997 57888765432111 1         1123444555566665555443221


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccC
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      +. .....   ..+.+..+|++|.+..
T Consensus        97 ~~-~~~~~---~~~~~~~~dvVi~~~~  119 (197)
T cd01492          97 TD-DISEK---PEEFFSQFDVVVATEL  119 (197)
T ss_pred             ec-Ccccc---HHHHHhCCCEEEECCC
Confidence            11 11111   1122346788887643

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.70  E-value=0.093  Score=42.71  Aligned_cols=34  Identities=26%  Similarity=0.309  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+..++|.|+++++|.++++.....|++|+.+++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~  172 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCS  172 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeC
Confidence            4779999999999999998888888999888765

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>KOG4288|consensus

Probab=95.70  E-value=0.42  Score=37.04  Aligned_cols=35  Identities=26%  Similarity=0.243  Sum_probs=31.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQR   45 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~   45 (223)
                      ...+.||.+.+|+.++..+...||.++-++|....
T Consensus         4 k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas   38 (283)
T KOG4288|consen    4 KLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGAS   38 (283)
T ss_pred             cceeecccccchhhhhHHHHhcCceEEEeccccCC
Confidence            56789999999999999999999999999886654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.68  E-value=0.21  Score=40.76  Aligned_cols=117  Identities=15%  Similarity=0.199  Sum_probs=66.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|++|.+|.++|..|+.+|  ..++++|++           ..+...-++......  ..+.....    -+++.+
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-----------~a~g~alDL~~~~~~--~~i~~~~~----~~~~y~   64 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-----------NTPGVAADLSHINTP--AKVTGYLG----PEELKK   64 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-----------ccceeehHhHhCCCc--ceEEEecC----CCchHH
Confidence            68899999999999999999887  479999873           111111112111000  00000000    011234


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      .+...|++|.+||... ++  ..   +-.+.++.|..-...+.+.+.++   .+.+.+|++|-..
T Consensus        65 ~~~daDivvitaG~~~-k~--g~---tR~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          65 ALKGADVVVIPAGVPR-KP--GM---TRDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             hcCCCCEEEEeCCCCC-CC--CC---CHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            5678999999999632 21  22   24456677776555555554333   2346677777654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.67  E-value=0.094  Score=43.66  Aligned_cols=78  Identities=18%  Similarity=0.231  Sum_probs=47.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   85 (223)
                      .|.++||.|+ +++|...++.+...|+ +|+++++         +.++.+.    +++.+.....+..+. .+....+.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~---------~~~~~~~----~~~~Ga~~~i~~~~~~~~~~~~v~~  252 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDL---------NPSKFEQ----AKKFGVTEFVNPKDHDKPVQEVIAE  252 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHH----HHHcCCceEEcccccchhHHHHHHH
Confidence            4789999985 8999999888888898 7888865         4333332    233333222222221 122233333


Q ss_pred             HHHhcCCccEEEeccC
Q psy16220         86 ALENFGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~~~~id~li~~ag  101 (223)
                      +..  +.+|+++.+.|
T Consensus       253 ~~~--~~~d~vid~~G  266 (369)
T cd08301         253 MTG--GGVDYSFECTG  266 (369)
T ss_pred             HhC--CCCCEEEECCC
Confidence            322  36999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.67  E-value=0.045  Score=44.63  Aligned_cols=72  Identities=28%  Similarity=0.465  Sum_probs=47.2

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +.+++++|.|+ |.+|+.+++.|...| .+|++++|         +..+..++.+++..       ...+.   +.    
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r---------~~~ra~~la~~~g~-------~~~~~---~~----  231 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANR---------TYERAEELAKELGG-------NAVPL---DE----  231 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHcCC-------eEEeH---HH----
Confidence            57899999987 899999999999876 56888876         55555444444321       11111   11    


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +.+.....|++|.+.+.
T Consensus       232 ~~~~l~~aDvVi~at~~  248 (311)
T cd05213         232 LLELLNEADVVISATGA  248 (311)
T ss_pred             HHHHHhcCCEEEECCCC
Confidence            22222357999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.66  E-value=0.032  Score=44.99  Aligned_cols=38  Identities=29%  Similarity=0.333  Sum_probs=35.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++.||.+.|+|.++-+|+.+|..|.++|+.|.++.+
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~  191 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHS  191 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECC
Confidence            35789999999999999999999999999999999865

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.63  E-value=0.38  Score=38.19  Aligned_cols=31  Identities=32%  Similarity=0.511  Sum_probs=27.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC----CeEEEEccC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERG----ASVVVNDLG   42 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G----~~vv~~~r~   42 (223)
                      +.|+|++|.+|..++..|+..|    ..++++|++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~   35 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDID   35 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCC
Confidence            4689998899999999999888    789999873

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08223 hypothetical protein; Validated

Probab=95.61  E-value=0.056  Score=43.38  Aligned_cols=37  Identities=27%  Similarity=0.434  Sum_probs=31.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      .+++.+|+|+|++ |+|..+++.|+..|. ++.++|.+.
T Consensus        24 kL~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         24 RLRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            4678899999876 999999999999996 688887644

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.59  E-value=0.045  Score=43.83  Aligned_cols=37  Identities=30%  Similarity=0.551  Sum_probs=34.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      .++++||.++|.|.+.-+|+.+|..|.++|+.|.++.
T Consensus       152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h  188 (285)
T PRK14191        152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH  188 (285)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe
Confidence            3678999999999999999999999999999999874

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.58  E-value=0.079  Score=42.57  Aligned_cols=34  Identities=29%  Similarity=0.436  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.+++|+|+++++|.+++..+...|+.|+.+++
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~  172 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAAS  172 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeC
Confidence            4789999999999999999999999999988865

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.55  E-value=0.1  Score=43.70  Aligned_cols=38  Identities=32%  Similarity=0.435  Sum_probs=32.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQ   44 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~   44 (223)
                      .+++++|+|.|++ |+|..+++.|+..|. +++++|.+..
T Consensus        38 ~l~~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD~D~v   76 (370)
T PRK05600         38 RLHNARVLVIGAG-GLGCPAMQSLASAGVGTITLIDDDTV   76 (370)
T ss_pred             HhcCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCCEE
Confidence            4667889999875 999999999999996 7889887643

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.55  E-value=0.051  Score=38.14  Aligned_cols=87  Identities=21%  Similarity=0.141  Sum_probs=46.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh----------CCccccccCCccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----------GGKAVPNYNSVVD   78 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~   78 (223)
                      ..++-|+|+ |.+|.++++.|.+.|+.|..+..        ++....+.....+...          ...+.+....++.
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s--------rs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDda   80 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYS--------RSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDA   80 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESS--------CHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe--------CCcccccccccccccccccccccccccCCEEEEEechHH
Confidence            347888988 79999999999999999877642        2443333333222111          0111222222334


Q ss_pred             hHHHHHHHHHh--cCCccEEEeccCCCC
Q psy16220         79 GDKIVQTALEN--FGRIDIVINNAGILR  104 (223)
Q Consensus        79 ~~~~~~~~~~~--~~~id~li~~ag~~~  104 (223)
                      +..+.+++...  +.+=.+++|+.|...
T Consensus        81 I~~va~~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   81 IAEVAEQLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence            66767766544  333458999999643

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.50  E-value=0.11  Score=42.13  Aligned_cols=34  Identities=32%  Similarity=0.401  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.|+++++|.++++.+.+.|++|+++++
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~  179 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTG  179 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEec
Confidence            3679999999999999999998899999988765

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.48  E-value=0.13  Score=39.82  Aligned_cols=40  Identities=13%  Similarity=0.084  Sum_probs=32.7

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ||-.+.++++.+||+||+ .++..=++.|++.|++|.+++-
T Consensus        17 ~pi~l~~~~~~VLVVGGG-~VA~RK~~~Ll~~gA~VtVVap   56 (223)
T PRK05562         17 MFISLLSNKIKVLIIGGG-KAAFIKGKTFLKKGCYVYILSK   56 (223)
T ss_pred             eeeEEECCCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEcC
Confidence            455566789999999986 6777778889999999999853

>PLN02602 lactate dehydrogenase

Probab=95.47  E-value=0.89  Score=37.78  Aligned_cols=116  Identities=13%  Similarity=0.123  Sum_probs=64.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc-ccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA-VPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   86 (223)
                      +++.|+|+ |.+|.++|..|+.+|.  .++++|+         ++...+....++...-... ...+....+        
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi---------~~~~~~g~a~DL~~~~~~~~~~~i~~~~d--------   99 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDV---------NPDKLRGEMLDLQHAAAFLPRTKILASTD--------   99 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC---------CCchhhHHHHHHHhhhhcCCCCEEEeCCC--------
Confidence            58999996 8999999999998774  6899987         3333332222332211000 011111011        


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                      .+.+..-|++|.+||.... +  ..+..   +.+..|+.    +++.+.+.+.+. ..+.+|++|-..
T Consensus       100 y~~~~daDiVVitAG~~~k-~--g~tR~---dll~~N~~----I~~~i~~~I~~~~p~~ivivvtNPv  157 (350)
T PLN02602        100 YAVTAGSDLCIVTAGARQI-P--GESRL---NLLQRNVA----LFRKIIPELAKYSPDTILLIVSNPV  157 (350)
T ss_pred             HHHhCCCCEEEECCCCCCC-c--CCCHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCch
Confidence            1234679999999996432 1  23333   34444544    444455555544 346677766533

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.47  E-value=0.33  Score=42.30  Aligned_cols=34  Identities=32%  Similarity=0.453  Sum_probs=29.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++++.++|.|.+ +.|.++|+.|.++|++|.+.|.
T Consensus         5 ~~~~~i~v~G~G-~sG~s~a~~L~~~G~~v~~~D~   38 (498)
T PRK02006          5 LQGPMVLVLGLG-ESGLAMARWCARHGARLRVADT   38 (498)
T ss_pred             cCCCEEEEEeec-HhHHHHHHHHHHCCCEEEEEcC
Confidence            567889999954 7899999999999999999874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.42  E-value=0.077  Score=41.20  Aligned_cols=37  Identities=30%  Similarity=0.399  Sum_probs=32.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCe---EEEEccC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGAS---VVVNDLG   42 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~---vv~~~r~   42 (223)
                      .++++++++|.|+ |+.|++++..|++.|.+   +.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3578899999999 79999999999999985   9999885

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.42  E-value=0.22  Score=40.61  Aligned_cols=117  Identities=15%  Similarity=0.242  Sum_probs=64.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|++|.+|.++|..|+.++.  .++++|++. .        ..+  .-++.....  ...+..... .   +...+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a--------~g~--a~DL~~~~~--~~~i~~~~~-~---~~~~~   63 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-A--------AGV--AADLSHIPT--AASVKGFSG-E---EGLEN   63 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-C--------cEE--EchhhcCCc--CceEEEecC-C---CchHH
Confidence            368999999999999999998874  689998743 1        000  001111000  000000000 0   01234


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcc
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSG  154 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~  154 (223)
                      .+..-|++|.+||.... +  ..+   -.+.++.|+.    +++.+.+.+.+.. .+.+|++|-...
T Consensus        64 ~~~daDivvitaG~~~~-~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        64 ALKGADVVVIPAGVPRK-P--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             HcCCCCEEEEeCCCCCC-C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence            56789999999996322 1  222   3445666666    5555555555443 456666665543

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.41  E-value=0.13  Score=41.79  Aligned_cols=34  Identities=21%  Similarity=0.465  Sum_probs=30.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|.|+++++|+++++.+.+.|++++++.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~  173 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS  173 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Confidence            4679999999999999999999999999877654

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.41  E-value=0.039  Score=41.53  Aligned_cols=38  Identities=32%  Similarity=0.432  Sum_probs=35.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+++||.++|+|.|.-+|+-++..|.++|+.|.+++.
T Consensus        57 ~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~   94 (197)
T cd01079          57 GNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDI   94 (197)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEec
Confidence            34799999999999999999999999999999999864

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.41  E-value=0.16  Score=42.82  Aligned_cols=34  Identities=26%  Similarity=0.310  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|.|+++++|.++++.+...|++++++++
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~  222 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVS  222 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcC
Confidence            4679999999999999999888889999887754

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.34  E-value=1.2  Score=36.62  Aligned_cols=125  Identities=14%  Similarity=0.116  Sum_probs=64.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +.+++.|+|+ |.+|..+|..++..|. .++++|+++....     .............+.......  ..+    .   
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~-----~~~ld~~~~~~~~~~~~~I~~--~~d----~---   69 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ-----GKALDISHSNVIAGSNSKVIG--TNN----Y---   69 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhh-----HHHHHHHhhhhccCCCeEEEE--CCC----H---
Confidence            4468999995 7899999999999994 8999987433210     001111111100000001110  011    1   


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCc
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNS  153 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~  153 (223)
                       +.+..-|++|.++|........+.+.+ ..+.+..|+    .+.+.+.+.+.+.. .+.++++|-..
T Consensus        70 -~~l~~aDiVI~tag~~~~~~~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         70 -EDIAGSDVVIVTAGLTKRPGKSDKEWN-RDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             -HHhCCCCEEEECCCCCCCCCCCcCCCC-HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence             234578999999987532111111111 133444554    35666666666554 34566666433

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.32  E-value=0.61  Score=38.21  Aligned_cols=119  Identities=14%  Similarity=0.228  Sum_probs=64.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +.+++.|+|+ |.+|..++..++..| +.++++|++....       ..+..  ++... ... ... . ..+.. ..+.
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~-------~g~~l--Dl~~~-~~~-~~~-~-~~i~~-~~d~   68 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVP-------QGKAL--DLKHF-STL-VGS-N-INILG-TNNY   68 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccc-------hhHHH--HHhhh-ccc-cCC-C-eEEEe-CCCH
Confidence            4568999997 889999999999888 7899998743321       11111  11110 000 000 0 00000 0011


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecC
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASN  152 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~  152 (223)
                       +.+..-|++|.++|....   ...+.   .+.+..|.    .+.+.+.+.+.+.. .+.+|++|-.
T Consensus        69 -~~l~~ADiVVitag~~~~---~g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         69 -EDIKDSDVVVITAGVQRK---EEMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             -HHhCCCCEEEECCCCCCC---CCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCh
Confidence             133578999999986432   12233   34555565    45556666666543 3456666543

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.30  E-value=0.12  Score=42.80  Aligned_cols=76  Identities=25%  Similarity=0.312  Sum_probs=46.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||.|+ +++|...++.+...|++ |+.+++         ++.+.+..    ++.+....++..+. +.   .+.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~---------~~~~~~~~----~~~Ga~~~i~~~~~-~~---~~~i  237 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDI---------DDRKLEWA----REFGATHTVNSSGT-DP---VEAI  237 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHHH----HHcCCceEEcCCCc-CH---HHHH
Confidence            4789999985 89999999888888985 777755         44433322    22233222333222 22   2223


Q ss_pred             HHhc--CCccEEEeccC
Q psy16220         87 LENF--GRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~--~~id~li~~ag  101 (223)
                      .+..  ..+|++|.+.|
T Consensus       238 ~~~~~~~g~d~vid~~g  254 (358)
T TIGR03451       238 RALTGGFGADVVIDAVG  254 (358)
T ss_pred             HHHhCCCCCCEEEECCC
Confidence            2222  25899999888

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.29  E-value=0.089  Score=38.81  Aligned_cols=33  Identities=33%  Similarity=0.379  Sum_probs=25.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ...+++|+| +|-.|...++.+...|+++++.+.
T Consensus        19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~   51 (168)
T PF01262_consen   19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDE   51 (168)
T ss_dssp             -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEES
T ss_pred             CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccC
Confidence            345788887 668999999999999999999875

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.27  E-value=0.12  Score=42.19  Aligned_cols=77  Identities=19%  Similarity=0.220  Sum_probs=44.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++++++||++++|..+++.....|++|+++++         +..+.+..    ++.+....++..+ .+....+.++...
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~---------~~~~~~~~----~~~g~~~~i~~~~-~~~~~~v~~~~~~  210 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVR---------RKEQVDLL----KKIGAEYVLNSSD-PDFLEDLKELIAK  210 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HHcCCcEEEECCC-ccHHHHHHHHhCC
Confidence            34444599999999998877788999888765         44433322    2223322223222 2222222222111


Q ss_pred             cCCccEEEeccC
Q psy16220         90 FGRIDIVINNAG  101 (223)
Q Consensus        90 ~~~id~li~~ag  101 (223)
                       ..+|+++.+.|
T Consensus       211 -~~~d~vid~~g  221 (324)
T cd08291         211 -LNATIFFDAVG  221 (324)
T ss_pred             -CCCcEEEECCC
Confidence             26999999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.26  E-value=0.055  Score=43.36  Aligned_cols=38  Identities=29%  Similarity=0.481  Sum_probs=34.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||+++|.|.+.-+|+.++..|.++|++|.++..
T Consensus       153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs  190 (285)
T PRK14189        153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS  190 (285)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC
Confidence            35789999999999999999999999999999998753

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.25  E-value=0.13  Score=39.41  Aligned_cols=40  Identities=30%  Similarity=0.475  Sum_probs=34.5

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ||..++++||.+||+||+ ..|.-=++.|++.|++|++++-
T Consensus         4 lPl~~~l~~k~VlvvGgG-~va~rKa~~ll~~ga~v~Vvs~   43 (210)
T COG1648           4 LPLFLDLEGKKVLVVGGG-SVALRKARLLLKAGADVTVVSP   43 (210)
T ss_pred             cceEEEcCCCEEEEECCC-HHHHHHHHHHHhcCCEEEEEcC
Confidence            566788999999999986 6788889999999999999854

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.24  E-value=0.19  Score=43.08  Aligned_cols=32  Identities=31%  Similarity=0.536  Sum_probs=29.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      ++.|+||.|.+|.++++.|.+.|++|.+.+|+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~   33 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRD   33 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            68999999999999999999999999999873

>PLN02827 Alcohol dehydrogenase-like

Probab=95.23  E-value=0.16  Score=42.54  Aligned_cols=79  Identities=22%  Similarity=0.271  Sum_probs=46.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   85 (223)
                      .|.++||.|+ +++|..+++.+...|+. |+++++         ++.+.+.    .++.+....++..+. .+....+.+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~---------~~~~~~~----a~~lGa~~~i~~~~~~~~~~~~v~~  258 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDI---------NPEKAEK----AKTFGVTDFINPNDLSEPIQQVIKR  258 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC---------CHHHHHH----HHHcCCcEEEcccccchHHHHHHHH
Confidence            4789999985 89999999888888985 666543         3333322    222233222222221 122333333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.+.|.
T Consensus       259 ~~~--~g~d~vid~~G~  273 (378)
T PLN02827        259 MTG--GGADYSFECVGD  273 (378)
T ss_pred             HhC--CCCCEEEECCCC
Confidence            322  369999999883

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.23  E-value=0.36  Score=40.74  Aligned_cols=80  Identities=19%  Similarity=0.212  Sum_probs=45.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .++++|| +|.++||..+++.+...|++++++ ++         ++.+.+.    .++.+.. .++.....+....+.++
T Consensus       185 ~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~---------~~~r~~~----a~~~Ga~-~v~~~~~~~~~~~v~~~  249 (393)
T TIGR02819       185 PGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDL---------NPARLAQ----ARSFGCE-TVDLSKDATLPEQIEQI  249 (393)
T ss_pred             CCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCC---------CHHHHHH----HHHcCCe-EEecCCcccHHHHHHHH
Confidence            4778999 456899999998888889986654 32         3333222    2222322 22222222333323332


Q ss_pred             HHhcCCccEEEeccCCC
Q psy16220         87 LENFGRIDIVINNAGIL  103 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~  103 (223)
                      .. -..+|++|.+.|..
T Consensus       250 ~~-~~g~Dvvid~~G~~  265 (393)
T TIGR02819       250 LG-EPEVDCAVDCVGFE  265 (393)
T ss_pred             cC-CCCCcEEEECCCCc
Confidence            21 13599999999953

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.22  E-value=0.13  Score=43.56  Aligned_cols=33  Identities=18%  Similarity=0.192  Sum_probs=27.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA---SVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~---~vv~~~r   41 (223)
                      |.+++|.|+++++|...++.+...|+   +|+++++
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~  211 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDV  211 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcC
Confidence            67999999999999998887766654   6888765

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.22  E-value=0.2  Score=40.33  Aligned_cols=34  Identities=21%  Similarity=0.314  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +|.+++|.|+++++|.++++.+...|++|+.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~  175 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTR  175 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeC
Confidence            4789999999999999999999999999888754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.17  E-value=0.13  Score=41.26  Aligned_cols=34  Identities=24%  Similarity=0.295  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +|.+++|.|+++++|.++++.+...|++|+.+++
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~  169 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVS  169 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcC
Confidence            4789999999999999999988899999888754

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK08328 hypothetical protein; Provisional

Probab=95.17  E-value=0.19  Score=39.21  Aligned_cols=37  Identities=30%  Similarity=0.474  Sum_probs=30.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      .+++++++|.|++ |+|.++++.|+..|. +++++|.+.
T Consensus        24 ~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            4567889999876 999999999999996 688887644

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.14  E-value=0.2  Score=42.11  Aligned_cols=34  Identities=29%  Similarity=0.323  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|+|+++++|.+++..+...|++++++++
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~  226 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVS  226 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeC
Confidence            4679999999999999999888888999887754

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.10  E-value=0.13  Score=41.56  Aligned_cols=34  Identities=21%  Similarity=0.156  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|.|+++++|.++++.+...|++++++.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~  171 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVR  171 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec
Confidence            4679999999999999999999999999988765

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.08  E-value=0.14  Score=38.11  Aligned_cols=32  Identities=34%  Similarity=0.521  Sum_probs=27.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      +++|.|+ ||+|..+++.|++.|. +++++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678885 7999999999999998 599998754

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.06  E-value=0.07  Score=42.74  Aligned_cols=38  Identities=32%  Similarity=0.346  Sum_probs=35.0

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++.||.++|+|.+.-+|+.++..|.++|+.|.++.+
T Consensus       154 ~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs  191 (285)
T PRK10792        154 GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHR  191 (285)
T ss_pred             CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEEC
Confidence            46789999999999999999999999999999999864

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.03  E-value=0.24  Score=41.24  Aligned_cols=78  Identities=18%  Similarity=0.257  Sum_probs=46.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   85 (223)
                      .|.++||.|+ +++|..+++.+...|+ +|+++++         +..+.+.. +++   +.....+..+. .+....+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~---------~~~~~~~~-~~~---ga~~~i~~~~~~~~~~~~~~~  249 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDI---------NEDKFEKA-KEF---GATDFINPKDSDKPVSEVIRE  249 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---------CHHHHHHH-HHc---CCCcEeccccccchHHHHHHH
Confidence            4789999975 8999999988888898 6887765         33333322 222   22222222221 112233333


Q ss_pred             HHHhcCCccEEEeccC
Q psy16220         86 ALENFGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~~~~id~li~~ag  101 (223)
                      ...  +.+|++|.+.|
T Consensus       250 ~~~--~g~d~vid~~g  263 (365)
T cd08277         250 MTG--GGVDYSFECTG  263 (365)
T ss_pred             HhC--CCCCEEEECCC
Confidence            322  46999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.03  E-value=0.15  Score=42.45  Aligned_cols=33  Identities=27%  Similarity=0.265  Sum_probs=27.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|+++||.|+ +++|..+++.+...|++|++++.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~  215 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISS  215 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            5789999765 89999999888888999887754

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.03  E-value=0.16  Score=42.52  Aligned_cols=33  Identities=27%  Similarity=0.264  Sum_probs=28.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|++++|.|+ +++|..+++.....|++|+++++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~  210 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISR  210 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeC
Confidence            4789999886 89999999988888999888765

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.02  E-value=0.19  Score=41.24  Aligned_cols=34  Identities=26%  Similarity=0.398  Sum_probs=30.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|.+++|+|+++++|.++++.....|++|+.+.+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~  195 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCS  195 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence            3889999999999999999988889999887643

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.98  E-value=0.076  Score=42.42  Aligned_cols=37  Identities=27%  Similarity=0.403  Sum_probs=34.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      .++++||.++|.|.|.-+|+-++..|.++|+.|.++.
T Consensus       152 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~h  188 (281)
T PRK14183        152 EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICH  188 (281)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC
Confidence            4678999999999999999999999999999999874

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.97  E-value=0.17  Score=35.18  Aligned_cols=65  Identities=28%  Similarity=0.387  Sum_probs=42.3

Q ss_pred             chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhcC--CccEEE
Q psy16220         20 GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFG--RIDIVI   97 (223)
Q Consensus        20 giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~id~li   97 (223)
                      |||...++.+...|++|+++++         ++.+.+.    +++.+.....+..+.+    +.+++.+..+  ++|++|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~---------~~~k~~~----~~~~Ga~~~~~~~~~~----~~~~i~~~~~~~~~d~vi   63 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDR---------SEEKLEL----AKELGADHVIDYSDDD----FVEQIRELTGGRGVDVVI   63 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEES---------SHHHHHH----HHHTTESEEEETTTSS----HHHHHHHHTTTSSEEEEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEEC---------CHHHHHH----HHhhcccccccccccc----cccccccccccccceEEE
Confidence            6899999988899999999976         5544432    3333433333433333    4444444443  699999


Q ss_pred             eccC
Q psy16220         98 NNAG  101 (223)
Q Consensus        98 ~~ag  101 (223)
                      .++|
T Consensus        64 d~~g   67 (130)
T PF00107_consen   64 DCVG   67 (130)
T ss_dssp             ESSS
T ss_pred             EecC
Confidence            9998

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.96  E-value=0.86  Score=37.16  Aligned_cols=113  Identities=16%  Similarity=0.167  Sum_probs=61.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|+ |.+|.++|..|+.+|  ..++++++         +....+....++..... .... .....     .. .+
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~---------~~~~~~g~a~dl~~~~~-~~~~-~~i~~-----~d-~~   63 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDI---------NKAKAEGEAMDLAHGTP-FVKP-VRIYA-----GD-YA   63 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEEC---------CchhhhhHHHHHHcccc-ccCC-eEEee-----CC-HH
Confidence            5788998 799999999999999  57999987         33333222222222110 0000 00000     00 12


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEec
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTAS  151 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  151 (223)
                      .+...|++|.+++.....   ..   +..+.+..|+.-    .+.+.+.+.+. +.|.+++++.
T Consensus        64 ~l~~aDiViita~~~~~~---~~---~r~dl~~~n~~i----~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          64 DCKGADVVVITAGANQKP---GE---TRLDLLKRNVAI----FKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             HhCCCCEEEEccCCCCCC---CC---CHHHHHHHHHHH----HHHHHHHHHHHCCCeEEEEecC
Confidence            356899999999964321   11   223445555544    44444444433 3466776654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=94.92  E-value=0.086  Score=37.26  Aligned_cols=32  Identities=28%  Similarity=0.333  Sum_probs=28.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++++++++|.+  .|.++|..|.+.|++|+.+|.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi   47 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDI   47 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEEC
Confidence            45789999998  888899999999999999987

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.92  E-value=0.093  Score=42.04  Aligned_cols=37  Identities=22%  Similarity=0.390  Sum_probs=34.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      .++++||.++|.|.|.-+|+-++..|.++|+.|.++.
T Consensus       153 ~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ch  189 (284)
T PRK14190        153 NIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCH  189 (284)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe
Confidence            3578999999999999999999999999999999874

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.90  E-value=0.21  Score=41.19  Aligned_cols=76  Identities=28%  Similarity=0.403  Sum_probs=46.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+++++|+|+ +++|..+++.+...|+ +|+++++         +.++.+.. .++   +.....+..+..    ..+.+
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~---------~~~~~~~~-~~~---ga~~~i~~~~~~----~~~~l  233 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEP---------SEARRELA-EEL---GATIVLDPTEVD----VVAEV  233 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHH-HHh---CCCEEECCCccC----HHHHH
Confidence            4789999985 7999999998889999 7777754         44443322 222   333233333222    22233


Q ss_pred             HHhc--CCccEEEeccC
Q psy16220         87 LENF--GRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~--~~id~li~~ag  101 (223)
                      .+..  +.+|.++.+.|
T Consensus       234 ~~~~~~~~~d~vid~~g  250 (351)
T cd08233         234 RKLTGGGGVDVSFDCAG  250 (351)
T ss_pred             HHHhCCCCCCEEEECCC
Confidence            3322  24999999987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.88  E-value=0.78  Score=38.60  Aligned_cols=116  Identities=12%  Similarity=0.103  Sum_probs=63.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-e----EEE--E--ccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-S----VVV--N--DLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~----vv~--~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      ++.|+|++|.+|.++|-.|+..|. .    +.+  +  ++         +.+..+...-++...-......+    .+. 
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~---------~~~~a~g~a~DL~d~a~~~~~~v----~i~-  111 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSER---------SKEALEGVAMELEDSLYPLLREV----SIG-  111 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCc---------cchhhhHHHHHHHHhhhhhcCce----EEe-
Confidence            799999999999999999998764 3    333  3  44         34444433333332110000000    000 


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-c-CCCcEEEEecC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-Q-NYGRLVMTASN  152 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~g~iv~vsS~  152 (223)
                        ..-.+.+...|++|.+||... ++  ..+   -.+.++.|..    +++.+.+.+.+ . +.+.+|.+|-.
T Consensus       112 --~~~y~~~kdaDIVVitAG~pr-kp--g~t---R~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsNP  172 (387)
T TIGR01757       112 --IDPYEVFEDADWALLIGAKPR-GP--GME---RADLLDINGQ----IFADQGKALNAVASKNCKVLVVGNP  172 (387)
T ss_pred             --cCCHHHhCCCCEEEECCCCCC-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCCc
Confidence              011344568999999999632 22  223   3445555655    45555555555 3 34566666643

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.87  E-value=0.084  Score=42.31  Aligned_cols=38  Identities=29%  Similarity=0.512  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++.||.++|+|.+.-+|+-++..|.++|+.|.++..
T Consensus       159 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs  196 (287)
T PRK14176        159 GVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHV  196 (287)
T ss_pred             CCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEec
Confidence            46789999999999999999999999999999999853

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.85  E-value=0.087  Score=42.24  Aligned_cols=38  Identities=24%  Similarity=0.405  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|.|.|.-+|+-++..|.++|+.|.++..
T Consensus       150 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs  187 (287)
T PRK14173        150 GIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHS  187 (287)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCC
Confidence            45789999999999999999999999999999998854

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.84  E-value=0.24  Score=39.61  Aligned_cols=33  Identities=42%  Similarity=0.501  Sum_probs=27.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r   41 (223)
                      .++++||.|+ +++|..+++.+...|++ |+++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~  153 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADP  153 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence            5789999986 79999999888888997 777654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.82  E-value=0.24  Score=40.41  Aligned_cols=37  Identities=19%  Similarity=0.079  Sum_probs=32.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      .++||++.|.|- |.||+.+|+.|...|++|+..++..
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~  169 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSR  169 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            468899998875 4899999999999999999998744

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.76  E-value=0.63  Score=37.80  Aligned_cols=114  Identities=18%  Similarity=0.280  Sum_probs=63.2

Q ss_pred             EEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         13 IVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        13 lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      .|+|+ |++|.++|..|+.+|  ..++++|+         ++........++....... .. ........     .+.+
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~---------~~~~~~g~~~DL~~~~~~~-~~-~~i~~~~~-----~~~l   64 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDV---------NEEKAKGDALDLSHASAFL-AT-GTIVRGGD-----YADA   64 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeC---------CccHHHHHHHhHHHhcccc-CC-CeEEECCC-----HHHh
Confidence            57787 579999999999988  67999987         4444444444443321110 00 00000001     2345


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                      ..-|++|.++|....   ...+.   .+.+..|+.    +++.+.+.+.+. +.+.++++|-..
T Consensus        65 ~~aDiVIitag~p~~---~~~~R---~~l~~~n~~----i~~~~~~~i~~~~p~~~viv~sNP~  118 (300)
T cd00300          65 ADADIVVITAGAPRK---PGETR---LDLINRNAP----ILRSVITNLKKYGPDAIILVVSNPV  118 (300)
T ss_pred             CCCCEEEEcCCCCCC---CCCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccChH
Confidence            679999999996432   12222   334444544    444444554544 346777777543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.75  E-value=0.16  Score=39.24  Aligned_cols=34  Identities=29%  Similarity=0.406  Sum_probs=29.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      ++++++++|.| .|.+|+.+|+.|.+.|++++.++
T Consensus        20 ~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vs   53 (217)
T cd05211          20 SLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVS   53 (217)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEE
Confidence            57899999998 57999999999999999766653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.74  E-value=0.096  Score=41.80  Aligned_cols=38  Identities=24%  Similarity=0.429  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|.|.|.-+|+-++..|.++|+.|.++..
T Consensus       153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs  190 (278)
T PRK14172        153 NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHS  190 (278)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC
Confidence            45789999999999999999999999999999999853

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.74  E-value=0.095  Score=41.95  Aligned_cols=38  Identities=32%  Similarity=0.486  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++.||.++|.|.|.-+|+-++..|.++|+.|.++..
T Consensus       154 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs  191 (284)
T PRK14177        154 GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHS  191 (284)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC
Confidence            36789999999999999999999999999999999853

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.73  E-value=0.096  Score=41.90  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=34.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|.|.|.-+|+-++..|.++|+.|.++..
T Consensus       153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs  190 (282)
T PRK14180        153 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR  190 (282)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcC
Confidence            35789999999999999999999999999999999854

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.70  E-value=0.16  Score=43.93  Aligned_cols=35  Identities=34%  Similarity=0.380  Sum_probs=30.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+|.++|.| .|+.|+++|+.|.++|+.|.+.|+
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~   46 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADD   46 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECC
Confidence            35678899998 668999999999999999999875

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.66  E-value=0.1  Score=42.07  Aligned_cols=38  Identities=29%  Similarity=0.489  Sum_probs=34.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|+|.|.-+|+-++..|.++|+.|.++..
T Consensus       153 ~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs  190 (297)
T PRK14186        153 QIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHS  190 (297)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC
Confidence            35789999999999999999999999999999999853

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.66  E-value=0.071  Score=43.04  Aligned_cols=37  Identities=27%  Similarity=0.375  Sum_probs=34.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      ..+++||+++|.|.++-+|+.+|..|+++|+.|.++.
T Consensus       153 ~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~  189 (296)
T PRK14188        153 HGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH  189 (296)
T ss_pred             CCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence            3578999999999999999999999999999999984

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.65  E-value=0.72  Score=37.55  Aligned_cols=31  Identities=35%  Similarity=0.520  Sum_probs=26.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLG   42 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~   42 (223)
                      ++.|+|+ |++|.++|-.|+.++.  .++++|++
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~   34 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDIN   34 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcc
Confidence            6788999 9999999999987753  79999884

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.64  E-value=0.23  Score=41.95  Aligned_cols=38  Identities=32%  Similarity=0.510  Sum_probs=31.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQ   44 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~   44 (223)
                      .+++.+|+|.|++ |+|..+++.|+..|. ++.++|.+..
T Consensus        39 ~L~~~~VlviG~G-GlGs~va~~La~~Gvg~i~lvD~D~v   77 (392)
T PRK07878         39 RLKNARVLVIGAG-GLGSPTLLYLAAAGVGTLGIVEFDVV   77 (392)
T ss_pred             HHhcCCEEEECCC-HHHHHHHHHHHHcCCCeEEEECCCEe
Confidence            3567889999876 999999999999997 6888876543

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.60  E-value=0.11  Score=41.54  Aligned_cols=38  Identities=21%  Similarity=0.414  Sum_probs=34.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|.|.|.-+|+-++..|.++|+.|.++..
T Consensus       151 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs  188 (282)
T PRK14169        151 DIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHS  188 (282)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECC
Confidence            36789999999999999999999999999999998853

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.58  E-value=0.27  Score=40.14  Aligned_cols=34  Identities=32%  Similarity=0.487  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++|.|+++.+|.++++.+...|++++.+++
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~  195 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTS  195 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeC
Confidence            4679999999999999999999999999888765

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.55  E-value=0.098  Score=41.81  Aligned_cols=43  Identities=16%  Similarity=0.265  Sum_probs=34.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAE   61 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~   61 (223)
                      +++++|.|+ ||-+++++..|++.|+ +|.++.|         +.++.+.+.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR---------~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVAR---------NEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC---------CHHHHHHHHHH
Confidence            468898886 7999999999999997 5999877         55555555444

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.54  E-value=0.37  Score=39.28  Aligned_cols=33  Identities=21%  Similarity=0.403  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAER-GASVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r   41 (223)
                      +.++||.|+++++|.++++.+... |++|+.+.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~  182 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATAS  182 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcC
Confidence            789999999999999988777666 999988754

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=94.53  E-value=0.28  Score=39.88  Aligned_cols=33  Identities=27%  Similarity=0.307  Sum_probs=29.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      .+.+++|.|+++.+|.+++..+...|++|++++
T Consensus       162 ~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~  194 (325)
T cd08264         162 PGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS  194 (325)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEe
Confidence            478999999999999999999999999988874

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	223
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		2e-82
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		6e-81
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		1e-79
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		8e-66
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-37
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-32
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		9e-30
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-29
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		5e-28
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-27
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-27
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		6e-27
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-27
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-26
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-26
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-26
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-26
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		4e-26
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-26
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-26
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-24
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-24
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		3e-24
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-23
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-22
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-22
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-22
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-22
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		3e-22
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-22
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		8e-22
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		8e-22
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		2e-21
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-21
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-21
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		6e-21
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		7e-21
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		9e-21
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-20
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-20
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		2e-20
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-20
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		9e-20
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-19
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-18
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-18
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-18
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		3e-18
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		4e-18
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-18
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		5e-18
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		5e-18
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		5e-18
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		6e-18
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		7e-18
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		7e-18
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-17
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		1e-17
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-17
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-17
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-17
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-17
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-17
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-17
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-17
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-17
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-17
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		3e-17
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		3e-17
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-17
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		4e-17
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		4e-17
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		8e-17
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-16
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		1e-16
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-16
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-16
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-16
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-16
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-16
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-16
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-16
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		3e-16
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		6e-16
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-16
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		9e-16
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-15
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-15
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-15
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		1e-15
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-15
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		2e-15
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-15
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-15
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-15
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		5e-15
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		5e-15
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		6e-15
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-15
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-14
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-14
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-14
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-14
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		1e-14
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-14
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-14
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-14
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-14
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-14
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-14
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-14
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		5e-14
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		6e-14
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		8e-14
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		8e-14
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		8e-14
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		1e-13
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		1e-13
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-13
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-13
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-13
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-13
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		4e-13
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		8e-13
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-12
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-12
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-12
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		3e-12
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		5e-12
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		8e-12
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		8e-12
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		9e-12
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		9e-12
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		9e-12
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		1e-11
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		1e-11
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		1e-11
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-11
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-11
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-11
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-11
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-11
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-11
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		5e-11
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		8e-11
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		8e-11
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		8e-11
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		9e-11
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		9e-11
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-10
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-10
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-10
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-10
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-10
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-10
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-10
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-10
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-10
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		3e-10
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		4e-10
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		4e-10
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		5e-10
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		5e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		5e-10
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		7e-10
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		7e-10
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		8e-10
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		8e-10
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		8e-10
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		1e-09
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		1e-09
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-09
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-09
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		2e-09
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-09
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-09
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		2e-09
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		3e-09
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		4e-09
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		6e-09
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		7e-09
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		9e-09
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-08
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		1e-08
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-08
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-08
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-08
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-08
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		2e-08
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		3e-08
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		3e-08
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-08
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		4e-08
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-08
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		8e-08
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-07
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		1e-07
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		1e-07
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-07
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-07
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		2e-07
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-07
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-07
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		3e-07
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-07
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		4e-07
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		6e-07
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		7e-07
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		9e-07
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		9e-07
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		9e-07
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		1e-06
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-06
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-06
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		2e-06
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		2e-06
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-06
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-06
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-06
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		7e-06
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		7e-06
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		7e-06
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		7e-06
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		8e-06
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		8e-06
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		8e-06
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		8e-06
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		8e-06
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		9e-06
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		1e-05
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-05
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-05
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		1e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		1e-05
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		1e-05
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		1e-05
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-05
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		2e-05
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-05
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		8e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		2e-04
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		2e-04
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-04
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		3e-04
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		7e-04

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 137/203 (67%), Positives = 174/203 (85%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           ++R+DGRVA+VTGAGAGLGR YALL AERGA VVVNDLGG   GDG S +AAD VV EIR
Sbjct: 14  KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR 73
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             GG+AV +YNSV+DG K+++TA++ FGR+DI++NNAGILRD+S  + S+ DW LV DVH
Sbjct: 74  KAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH 133
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ NY+AAKM L+GL+NT++IEG 
Sbjct: 134 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA 193
Query: 184 KNNIHCNVIVPTAASRLTEDILP 206
           +NN+ CNVIVPTAASR+TE ILP
Sbjct: 194 RNNVLCNVIVPTAASRMTEGILP 216

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score =  296 bits (758), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 139/206 (67%), Positives = 171/206 (83%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +RFDGRV +VTGAGAGLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct: 22  MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVE 81
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EIR +GGKAV NY+SV +G+K+V+TAL+ FGRID+V+NNAGILRD+SFARISD DW ++ 
Sbjct: 82  EIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIH 141
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            VHL G+F+V+RAAW HMKKQ YGR++MT+S SG+ GNFGQANYSAAK+ L+GL+N+L+I
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 201
Query: 181 EGEKNNIHCNVIVPTAASRLTEDILP 206
           EG K+NIHCN I P A SR+T+ ++P
Sbjct: 202 EGRKSNIHCNTIAPNAGSRMTQTVMP 227

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 140/202 (69%), Positives = 165/202 (81%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           +RFDGRV +VTGAG GLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV EIR 
Sbjct: 5   LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR 64
Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +GGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++Q VHL
Sbjct: 65  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHL 124
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G+F+V+RAAW H KKQNYGR++ TAS SG+ GNFGQANYSAAK+ L+GL+NTL IEG K
Sbjct: 125 RGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRK 184
Query: 185 NNIHCNVIVPTAASRLTEDILP 206
           NNIHCN I P A SR TE + P
Sbjct: 185 NNIHCNTIAPNAGSRXTETVXP 206

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score =  246 bits (627), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 119/203 (58%), Positives = 155/203 (76%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           V F  +V I+TGAG GLG+ Y+L  A+ GA VVVNDLGG  +G G +SKAAD VV EI  
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63
Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            GG AV +YN+V+DGDKIV+TA++NFG + ++INNAGILRD S  ++++ D++LV DVHL
Sbjct: 64  NGGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHL 123
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            GAF V++AAWP+ +KQ YGR+V T+S +GL GNFGQANY++AK AL+G + TL+ EG K
Sbjct: 124 NGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAK 183
Query: 185 NNIHCNVIVPTAASRLTEDILPP 207
            NI  N I P A SR+TE I+PP
Sbjct: 184 YNIKANAIAPLARSRMTESIMPP 206

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKS-SKAADTVVAEIRSKG 66
           DGRV IVTGAG G+GR++AL  A  GA VVVND+G   DG   S   AA +VV EI + G
Sbjct: 26  DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG 85
Query: 67  GKAVPNYNSVVDGDK---IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G+AV + ++V D D+   ++QTA+E FG +D+++NNAGI+RD+  A  S+ ++  V  VH
Sbjct: 86  GEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVH 145
Query: 124 LTGAFRVSRAA---WPHMKKQNY---GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
           L G F   R A   W  + K      GR++ T+S +GL G+ GQ NYSAAK  +  L+  
Sbjct: 146 LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLV 205
Query: 178 LSIEGEKNNIHCNVIVPTAASRLTEDIL 205
            + E  +  +  N I P+A +R+TE + 
Sbjct: 206 GAAEMGRYGVTVNAIAPSARTRMTETVF 233

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score =  135 bits (340), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 11/187 (5%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           V +VTGA  G+G++ AL L + G  V+VN          +S+KAA+ V  +I + GG+A+
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNY--------ARSAKAAEEVSKQIEAYGGQAI 54
Query: 71  P---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
               + +   D + +++TA++ +G ID+V+NNAGI RD    R+  + W  V D++LTG 
Sbjct: 55  TFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGV 114
Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
           F  ++AA   M K+  GR++  AS  GL+GN GQANY+AAK  ++G S T + EG   NI
Sbjct: 115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNI 174
Query: 188 HCNVIVP 194
           + NV+ P
Sbjct: 175 NVNVVCP 181

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  126 bits (317), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 120/224 (53%), Gaps = 18/224 (8%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           ++  G+ AIVTG+  GLG++ A  L   GA++V+N           +S + D    E ++
Sbjct: 1   MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG--------SPASTSLDATAEEFKA 52
Query: 65  KGGKAVPNYNSVV---DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
            G   V     V    D + +V+TA++ FGRIDI++NNAGI RD    ++S+ DW  V +
Sbjct: 53  AGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLN 112
Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
            +L  A+  ++A    M KQ  G+++   S +G++GN GQANY+A+K  L+G + +++ E
Sbjct: 113 TNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKE 172
Query: 182 GEKNNIHCNVIVPTAASRLTEDILPP-------GSYPVKGFDPP 218
                I+CN + P        D+LP         + P+K F  P
Sbjct: 173 FAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTP 216

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 11/202 (5%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA+VTGA  G+GR+ A+ LA++GA+VVVN  G ++         A+ VV EI+  G
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQK--------ANEVVDEIKKLG 53
Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             A+     V + + +   V+  ++ FG++DI++NNAG+ +D    R+ + +W  V + +
Sbjct: 54  SDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTN 113
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L G F  ++A    M +Q +GR+V  AS  G+ GN GQANY AAK  ++GL+ T + E  
Sbjct: 114 LKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELA 173
Query: 184 KNNIHCNVIVPTAASRLTEDIL 205
             NI  N I P   +    D+L
Sbjct: 174 SRNITVNAIAPGFIATDMTDVL 195

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  120 bits (302), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F+G++A+VTGA  G+GR+ A  LA RGA V+         G   S   A  +   + + G
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVI---------GTATSENGAQAISDYLGANG 53
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              + N       + +++     FG +DI++NNAGI RD    R+ D +W  + + +L+ 
Sbjct: 54  KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSS 113
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            FR+S+A    M K+ +GR++   S  G +GN GQANY+AAK  L+G S +L+ E     
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 173
Query: 187 IHCNVIVP 194
           I  NV+ P
Sbjct: 174 ITVNVVAP 181

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F+G++A+VTGA  G+GR+ A  LA RGA V+         G   S   A  +   + + G
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVI---------GTATSENGAQAISDYLGANG 53
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              + N       + +++     FG +DI++NNAGI RD    R+ D +W  + + +L+ 
Sbjct: 54  KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSS 113
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            FR+S+A    M K+ +GR++   S  G +GN GQAN++AAK  L+G S +L+ E     
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRG 173
Query: 187 IHCNVIVP 194
           I  NV+ P
Sbjct: 174 ITVNVVAP 181

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 11/188 (5%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           + A+VTGA  G+GRS AL LAE G +V VN  G        S + A+ VV EI++KG  +
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAG--------SKEKAEAVVEEIKAKGVDS 62
Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                +V D D++   ++  +  FG +D+++NNAGI RD    R+ + +W  V D +L G
Sbjct: 63  FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKG 122
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F   + A P M +Q  G ++  +S  G +GN GQANY A K  ++GL+ + + E     
Sbjct: 123 VFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRG 182
Query: 187 IHCNVIVP 194
           I  N + P
Sbjct: 183 ITVNAVAP 190

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  117 bits (292), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 13/195 (6%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           +++  G+V++VTG+  G+GR+ A  LA  G++V++    G+R         A  V  EI 
Sbjct: 2   EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGER---------AKAVAEEIA 52
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGR----IDIVINNAGILRDKSFARISDTDWQLV 119
           +K G         +  ++ +  A E        IDI++NNAGI RDK F R+S  DW+ V
Sbjct: 53  NKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEV 112
Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             V+LTG F V++ +   M KQ +GR+V  +S  G  GN GQ NYS  K  L+G + +L+
Sbjct: 113 LKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLA 172
Query: 180 IEGEKNNIHCNVIVP 194
            E    N+  N + P
Sbjct: 173 KELAPRNVLVNAVAP 187

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  117 bits (292), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M + +  +G+VA+VTGA  G+G++ A LLAERGA V+         G   S   A  +  
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVI---------GTATSESGAQAISD 54
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +   G     N  +    + +++   + FG +DI++NNAGI RD    R+ + +W  + 
Sbjct: 55  YLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIM 114
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +LT  FR+S+A    M K+  GR++   S  G +GN GQANY+AAK  ++G + +++ 
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAR 174
Query: 181 EGEKNNIHCNVIVPTA 196
           E     +  N + P A
Sbjct: 175 EVASRGVTVNTVAPGA 190

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M + +  +G+VA+VTGA  G+G++ A LLAERGA V+         G   S   A  +  
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVI---------GTATSESGAQAISD 54
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +   G     N  +    + +++   + FG +DI++NNAGI RD    R+ + +W  + 
Sbjct: 55  YLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIM 114
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +LT  FR+S+A    M K+  GR++   S  G +GN GQANY+AAK  ++G + +++ 
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAR 174
Query: 181 EGEKNNIHCNVIVP 194
           E     +  N + P
Sbjct: 175 EVASRGVTVNTVAP 188

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R+A+VTGA  G+GR+ AL LA  GA V VN               A    A   +   KA
Sbjct: 29  RIALVTGASRGIGRAIALELAAAGAKVAVNY---ASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
             +  S V+   +    +E +GR+D+++NNAGI RD    R+   DWQ V D++L G F 
Sbjct: 86  DVSQESEVEA--LFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
            SRAA   M KQ  GR++  AS  G +GN GQANYSAAK  ++GL+ T++ E     I  
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 190 NVIVP----------TAASRLTEDILPPGSY 210
           N + P           AA +L E ++P G Y
Sbjct: 204 NAVAPGFIATDMTSELAAEKLLE-VIPLGRY 233

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M + +  +G+VA+VTGA  G+G++ A LLAERGA V+         G   S   A  +  
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVI---------GTATSESGAQAISD 54
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +   G     N  +    + +++   + FG +DI++NNAGI RD    R+ + +W  + 
Sbjct: 55  YLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIM 114
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +LT  FR+S+A    M K+  GR++   S  G +GN GQAN++AAK  ++G + +++ 
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAR 174
Query: 181 EGEKNNIHCNVIVP 194
           E     +  N + P
Sbjct: 175 EVASRGVTVNTVAP 188

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 102/191 (53%), Gaps = 12/191 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            D +VAIVTGA  G+GR+ AL LA RGA V+         G   +   A+ + A  +  G
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVI---------GTATTEAGAEGIGAAFKQAG 76
Query: 67  GK---AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            +   AV N N     D +V++ L+ FG +++++NNAGI +D+   R+ D +W  V D +
Sbjct: 77  LEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTN 136
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L   FR+SRA    M K   GR+V   S  G  GN GQ NY+AAK  + G++  L+ E  
Sbjct: 137 LKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIG 196
Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 197 SRGITVNCVAP 207

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  114 bits (285), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 11/188 (5%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           + A+VTGA  G+GRS AL LAE G +V VN  G        S + A+ VV EI++KG  +
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAG--------SKEKAEAVVEEIKAKGVDS 56
Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                +V D D++   ++  +  FG +D+++NNAGI RD    R  + +W  V D +L G
Sbjct: 57  FAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKG 116
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F   + A P   +Q  G ++  +S  G +GN GQANY A K  ++GL+ + + E     
Sbjct: 117 VFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRG 176
Query: 187 IHCNVIVP 194
           I  N + P
Sbjct: 177 ITVNAVAP 184

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M + +  +G+VA+VTGA  G+G++ A LLAERGA V+         G   S   A  +  
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVI---------GTATSESGAQAISD 54
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +   G     N  +    + +++   + FG +DI++NNA I RD    R+ + +W  + 
Sbjct: 55  YLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIM 114
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +LT  FR+S+A    M K+  GR++   S  G +GN GQANY+AAK  ++G + +++ 
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAR 174
Query: 181 EGEKNNIHCNVIVP 194
           E     +  N + P
Sbjct: 175 EVASRGVTVNTVAP 188

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  113 bits (283), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M + +  +G+VA+VTGA  G+G++ A LLAERGA V+         G   S   A  +  
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVI---------GTATSESGAQAISD 54
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +   G     N  +    + +++   + FG +DI++NNA I RD    R+ + +W  + 
Sbjct: 55  YLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIM 114
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +LT  FR+S+A    M K+  GR++   S  G +GN GQANY+AAK  ++G + +++ 
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAR 174
Query: 181 EGEKNNIHCNVIVP 194
           E     +  N + P
Sbjct: 175 EVASRGVTVNTVAP 188

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+VA+VTGA  G+G++ A LLAERGA V+         G   S   A  +   +   G
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVI---------GTATSESGAQAISDYLGDNG 57
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                N  +    + +++   + FG +DI++NNAGI RD    R  + +W  + + +LT 
Sbjct: 58  KGXALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTS 117
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            FR+S+A      K+  GR++   S  G  GN GQANY+AAK  ++G + + + E     
Sbjct: 118 IFRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRG 177
Query: 187 IHCNVIVP 194
           +  N + P
Sbjct: 178 VTVNTVAP 185

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F+G++A+VTGA  G+GR+ A  LA RGA V+         G   S   A  +   + + G
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVI---------GTATSENGAQAISDYLGANG 53
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              + N       + +++     FG +DI++NNAGI RD    R+ D +W  + + +L+ 
Sbjct: 54  KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSS 113
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            FR+S+A    M K+ +GR++            GQANY+AAK  L+G S +L+ E     
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRG 164
Query: 187 IHCNVIVP 194
           I  NV+ P
Sbjct: 165 ITVNVVAP 172

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           + +VA+VTGAG G+GR  A +LA+  + V+            ++ K+ D+VV EI+S G 
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVIC---------ISRTQKSCDSVVDEIKSFGY 93
Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           ++      V   ++I   +   L     +DI++NNAGI RD  F R+ + +W+ V   +L
Sbjct: 94  ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNL 153
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
              F +++     M    YGR++  +S  GL GN GQANYS++K  ++G + +L+ E   
Sbjct: 154 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 213
Query: 185 NNIHCNVIVP-TAASRLTEDI 204
            NI  N I P   +S +T+ I
Sbjct: 214 RNITVNAIAPGFISSDMTDKI 234

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAA----DTVVAEI 62
             GRVA +TGA  G GRS+A+ LA  GA ++  D+          + A+    D     +
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 63  RSKGGKAVPNYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
             +G KA+     V D     ++V   +E FGR+D+V+ NAG+L       ++D  W  V
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132
Query: 120 QDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
             V+LTG +R  RA  P M +  N G +V+ +S++GL    G  +YSA+K  L  L+NTL
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTL 192
Query: 179 SIEGEKNNIHCNVIVP 194
           +IE  +  I  N I P
Sbjct: 193 AIELGEYGIRVNSIHP 208

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+ A+VTG+ +G+G   A +LA  GA++V+N       G G  + A    +AEI   G
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLN-------GFGDPAPA----LAEIARHG 50
Query: 67  GKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            KAV    + + V   + +   A   FG +DI++NNAGI       +     W  +  ++
Sbjct: 51  VKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALN 110
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L+  F  +R A P M+ +N+GR++  AS  GL+G+ G+A Y AAK  +VGL+  + +E  
Sbjct: 111 LSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETA 170
Query: 184 KNNIHCNVIVP 194
            +N+ CN I P
Sbjct: 171 TSNVTCNAICP 181

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Query: 7   FD--GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           FD  GR A+VTGA  GLG + A  L  +GA V    L G R+   K       + AE+  
Sbjct: 6   FDLTGRKALVTGATGGLGEAIARALHAQGAIV---GLHGTREEKLKE------LAAELGE 56
Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +      N +       + Q A E  G +DI++NNAGI RD  F R+SD DW  V  V+L
Sbjct: 57  RIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNL 116
Query: 125 TGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           T  F ++R    P M+++N GR++   S  G+ GN GQANY A+K  L+G S +L+ E  
Sbjct: 117 TSVFNLTRELTHPMMRRRN-GRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 175
Query: 184 KNNIHCNVIVP 194
             N+  N I P
Sbjct: 176 SRNVTVNCIAP 186

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Query: 7   FD--GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           FD  GR A+VTGA  GLG + A  L  +GA V    L G R+   K       + AE+  
Sbjct: 3   FDLTGRKALVTGATGGLGEAIARALHAQGAIV---GLHGTREEKLKE------LAAELGE 53
Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +      N +       + Q A E  G +DI++NNAGI RD  F R+SD DW  V  V+L
Sbjct: 54  RIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNL 113
Query: 125 TGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           T  F ++R    P M+++N GR++   S  G+ GN GQANY A+K  L+G S +L+ E  
Sbjct: 114 TSVFNLTRELTHPMMRRRN-GRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 172
Query: 184 KNNIHCNVIVP 194
             N+  N I P
Sbjct: 173 SRNVTVNCIAP 183

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A++TGA  G+GR+ AL LAE G ++ ++         G++ + A+ V  E R +G   
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHY--------GQNREKAEEVAEEARRRGSPL 53
Query: 70  VP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           V     N         +V  A E  G +D ++NNAGI RD    R+ D DW+ V + +L+
Sbjct: 54  VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLS 113
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             FR +R A   M K  +GR+V   S  G+LGN GQANY A+K  L+G +  ++ E  + 
Sbjct: 114 AVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQR 173
Query: 186 NIHCNVIVP 194
            I  N + P
Sbjct: 174 GITVNAVAP 182

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 18/192 (9%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   +  ++TGA  G+GR+   L A+ GA +V  D+      +G   +AA+ V A     
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREAAEAVGAH---- 52
Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
                P    V D   +      AL + GR+D V++ AGI RD    +    DW+LV  V
Sbjct: 53  -----PVVXDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLEDWELVLRV 107
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LTG+F V++AA    +++N G +V+TAS    LGN GQANY+A+   +VGL+ TL++E 
Sbjct: 108 NLTGSFLVAKAASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALEL 166
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 167 GRWGIRVNTLAP 178

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  GR A+VTGA  G+G + A     +GA V    L G R+   K          EI + 
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIV---GLHGTREDKLK----------EIAAD 70
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGR----IDIVINNAGILRDKSFARISDTDWQLVQD 121
            GK V  +++ +   K ++   E   R    IDI++NNAGI RD  F R+ D DW  V  
Sbjct: 71  LGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLA 130
Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+LT A  ++R     M ++ YGR++   S  G++GN GQ NY AAK  L+G S  L+ E
Sbjct: 131 VNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQE 190
Query: 182 GEKNNIHCNVIVP 194
               NI  N I P
Sbjct: 191 IASRNITVNCIAP 203

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 17/195 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +F+G+V +VTGAG  +G + AL LAE G ++ + D+         + +A +   A +R K
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM---------NREALEKAEASVREK 54
Query: 66  GGKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDT---DWQLV 119
           G +A      V   + ++ T    + +FG+ID + NNAG     +FA + D    D+  V
Sbjct: 55  GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY--QGAFAPVQDYPSDDFARV 112
Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             +++TGAF V +A    M  QNYGR+V TAS +G+ G    A Y  +K A++ L+ T +
Sbjct: 113 LTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAA 172
Query: 180 IEGEKNNIHCNVIVP 194
           ++    NI  N I P
Sbjct: 173 LDLAPYNIRVNAISP 187

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGA  G+G   A  LA +GA+VV         G   S  +A+      + KG KA
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVV---------GTATSQASAEKFENSXKEKGFKA 56
Query: 70  VPNYNSVVDGDKI----VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                ++ D + I     +   EN   IDI++NNAGI RD    R S+ +WQ V + +L+
Sbjct: 57  RGLVLNISDIESIQNFFAEIKAENLA-IDILVNNAGITRDNLXXRXSEDEWQSVINTNLS 115
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             FR S+       K+ +GR++   S  G  GN GQ NY AAK  ++G S +L+ E    
Sbjct: 116 SIFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASR 175
Query: 186 NIHCNVIVP 194
           NI  NV+ P
Sbjct: 176 NITVNVVAP 184

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 99/195 (50%), Gaps = 25/195 (12%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVV-----ND-----LGGQRDGDGKSSKAADTVV 59
           RVA VTG   GLG + +  L + G +V V     ND     L  +RD  G+  KA    V
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-GRDFKAYAVDV 84
Query: 60  AEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           A+  S               ++  +  L +FG++D++INNAGI RD +F +++  DW  V
Sbjct: 85  ADFESC--------------ERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAV 130
Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
               L   F V++     M ++ +GR+V   S +G  G FGQANY++AK  + G + TL+
Sbjct: 131 MRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLA 190
Query: 180 IEGEKNNIHCNVIVP 194
           +E  K  I  N + P
Sbjct: 191 LETAKRGITVNTVSP 205

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           ++F G+  ++TGA  G+G   A  LA  G  V +N           +++ AD +  E+  
Sbjct: 25  MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYR--------SNAEVADALKNELEE 76
Query: 65  KGGKA-VPNYNSVVDGDKI--VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           KG KA V  +++  + D I  +QT +++ G +  ++NNAG++RDK   ++   D+  V D
Sbjct: 77  KGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136
Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
            +LT AF   R A   M K  +G +V  AS  G  GN GQ NYSA+K  ++ +S + + E
Sbjct: 137 NNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYE 196
Query: 182 GEKNNIHCNVIVP 194
           G   NI  N + P
Sbjct: 197 GALRNIRFNSVTP 209

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTV---VAEI 62
           + +G+VA +TGA  G GRS+A+ LA  GA ++  D+  Q DG        D +   V ++
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
Query: 63  RSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKS-FARISDTDWQL 118
            + G + + +   V D D +   V   +   GR+DIV+ NA +  + +   R+    W+ 
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRD 144
Query: 119 VQDVHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
           + DV+L GA+  +R A PH M  +  G +V T+S  GL G     NY A+K  L GL  T
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204
Query: 178 LSIEGEKNNIHCNVIVPTAAS 198
           +++E    NI  N++ P++ +
Sbjct: 205 MALELGPRNIRVNIVCPSSVA 225

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 97.1 bits (240), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 6/194 (3%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTV---VAEIR 63
           F+G+ A++TG   G+GRS+A+ LAE GA + + D     D  G     AD +   VA + 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 64  SKGGKAVPNYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             G + +     V D    +  V  A +  G IDI I NAGI        +    W  V 
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI 127
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
             +LTG F    A  P M K+NYGR+V  +S  G   NF QA+Y ++K  ++GL+   + 
Sbjct: 128 GTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAH 187
Query: 181 EGEKNNIHCNVIVP 194
           +     I  N + P
Sbjct: 188 DLVGYGITVNAVAP 201

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 17/214 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           FDGR A+VTG  +G+G + A   A RGA +V++D+            A +  V  +R +G
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDV---------DQPALEQAVNGLRGQG 79
Query: 67  GKAVPNYNSVVDGDKIVQTALENF---GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             A      V   D++V+ A E F   G +D+V +NAGI+     A+++  DW+ V D+ 
Sbjct: 80  FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDID 139
Query: 124 LTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           L G+     A  P + +Q  G  +  TAS +GL+ N G   Y  AK  +VGL+ TL+ E 
Sbjct: 140 LWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREV 199
Query: 183 EKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFD 216
           + N I  +V+ P     + E  L   S  ++G D
Sbjct: 200 KPNGIGVSVLCPM----VVETKLVSNSERIRGAD 229

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 96.7 bits (239), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           + +   G+VA+VTGA  G+G++ AL L   GA V+         G   S+  A+ +   +
Sbjct: 21  QSMSLQGKVALVTGASRGIGQAIALELGRLGAVVI---------GTATSASGAEKIAETL 71
Query: 63  RSKGGKAVPNYNSVVD--GDKIVQTALEN----FGRIDIVINNAGILRDKSFARISDTDW 116
           ++ G   V     V+D   D+ V   LE+     G+  IV+NNAGI RD    R+ D +W
Sbjct: 72  KANG---VEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEW 128
Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             V + +L   +R+S+A    M K  +GR++   S  G +GN GQ NY+AAK  L G + 
Sbjct: 129 FDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTR 188
Query: 177 TLSIEGEKNNIHCNVIVP 194
            L+ E     I  N + P
Sbjct: 189 ALAREVGSRAITVNAVAP 206

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA+VTG+ +G+G   A  LA +GA +V+N  G         +   + V A + ++ 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--------DAAEIEKVRAGLAAQH 53
Query: 67  G-KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G K + +   +  G+ +   V  A+   GRIDI++NNAGI             W  +  +
Sbjct: 54  GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILAL 113
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L+  F  + AA PHMKKQ +GR++  AS  GL+ +  ++ Y AAK  +VG +   ++E 
Sbjct: 114 NLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173
Query: 183 EKNNIHCNVIVP 194
               I  N I P
Sbjct: 174 AGQGITANAICP 185

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA+VTG+ +G+G   A  LA +GA +V+N  G         +   + V A + ++ 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--------DAAEIEKVRAGLAAQH 53
Query: 67  G-KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G K + +   +  G+ +   V  A+   GRIDI++NNAGI             W  +  +
Sbjct: 54  GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILAL 113
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L+  F  + AA PHMKKQ +GR++  AS  GL+ +  ++ Y AAK  +VG +   ++E 
Sbjct: 114 NLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173
Query: 183 EKNNIHCNVIVP 194
               I  N I P
Sbjct: 174 AGQGITANAICP 185

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA+VTG+ +G+G   A  LA +GA +V+N  G         +   + V A + ++ 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--------DAAEIEKVRAGLAAQH 53
Query: 67  G-KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G K + +   +  G+ +   V  A+   GRIDI++NNAGI             W  +  +
Sbjct: 54  GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILAL 113
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L+  F  + AA PHMKKQ +GR++  AS  GL+ +  ++ Y AAK  +VG +   ++E 
Sbjct: 114 NLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173
Query: 183 EKNNIHCNVIVP 194
               I  N I P
Sbjct: 174 AGQGITANAICP 185

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQR---DGDGKSSKAADTVVAEI 62
           R  G+VA +TGA  G GR++A+ LA+ GA +V  DL  Q+   D    S +     V  +
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102
Query: 63  RSKGGKAVPNYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
             +G + +     V D      +V  AL  FG IDI+++N GI        ++D  W  +
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDI 162
Query: 120 QDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
              +L GA+   RA  P M ++   G ++  +S  GL G  GQ++Y+A+K  + GL  +L
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222
Query: 179 SIEGEKNNIHCNVIVPTA 196
           + E  ++NI  N + P A
Sbjct: 223 ANEVGRHNIRVNSVNPGA 240

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 12/192 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+ A+VTG+ +G+G + A  LA+ GA VV+N  G   D + + S         + SK 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERST--------LESKF 53
Query: 67  GKAVPNYNSVVDGDK----IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G      N+ +   +     +  A E  G +DI++NNAGI             W  +  +
Sbjct: 54  GVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIAL 113
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L+  F  + AA P M+KQ +GR++  AS  GL+ +  ++ Y AAK  +VGL+   ++E 
Sbjct: 114 NLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALEN 173
Query: 183 EKNNIHCNVIVP 194
               I CN I P
Sbjct: 174 AGKGITCNAICP 185

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 99/189 (52%), Gaps = 13/189 (6%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V IVTGAG+G+GR+ A   A   + VV  +L   R          + +V E+R  G + 
Sbjct: 8   KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDR---------LNQIVQELRGMGKEV 58
Query: 70  V---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQDVHLT 125
           +    + +   D ++ V+   E + RID++ NNAGI+   +  A +SD  W+ V  V+L 
Sbjct: 59  LGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLY 118
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
            AF  SRA  P M KQ  G +V TAS +G+ G F  A Y+ AK  L+GL+ +++      
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ 178
Query: 186 NIHCNVIVP 194
            I    ++P
Sbjct: 179 GIRAVAVLP 187

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+    +G+VA+VTGAG G+GR  A+ L  RG  V+VN           S+++A+ VVA 
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVN--------YANSTESAEEVVAA 73
Query: 62  IRSKGGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           I+  G  A     N   V D  ++ + A++ FG++DIV +N+G++       ++  ++  
Sbjct: 74  IKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDR 133
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNT 177
           V  ++  G F V+R A+ H++    GRL++  S +G        A YS +K A+   +  
Sbjct: 134 VFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARC 191
Query: 178 LSIEGEKNNIHCNVIVP 194
           ++I+     I  NV+ P
Sbjct: 192 MAIDMADKKITVNVVAP 208

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 20/200 (10%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+    +G+VA+VTGAG G+GR  A+ L  RG  V+VN           S+++A+ VVA 
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVN--------YANSTESAEEVVAA 73
Query: 62  IRSKGGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT---D 115
           I+  G  A     N   V D  ++ + A++ FG++DIV +N+G++   SF  + D    +
Sbjct: 74  IKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV---SFGHVKDVTPEE 130
Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGL 174
           +  V  ++  G F V+R A+ H++    GRL++  S +G        A YS +K A+   
Sbjct: 131 FDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAIETF 188
Query: 175 SNTLSIEGEKNNIHCNVIVP 194
           +  ++I+     I  NV+ P
Sbjct: 189 ARCMAIDMADKKITVNVVAP 208

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P  +RF+ +V IVTG+G G+G++YA  LA  GA+VVV D+         +++AA+ V  +
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI---------NAEAAEAVAKQ 52
Query: 62  IRSKGGKAVPNYNSVVDGDK---IVQTALENFGRIDIVINNAGILRDKSFARISDTD--- 115
           I + GG A+     V D +    +    L  FG ID ++NNA I        +   D   
Sbjct: 53  IVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEY 112
Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYSAAKMALVGL 174
           ++    V+L GA   +RA +  M K+  G +V  +S +  L  N+    Y  AK+ + GL
Sbjct: 113 YKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY----YGLAKVGINGL 168
Query: 175 SNTLSIEGEKNNIHCNVIVP----TAASRLT 201
           +  LS E    NI  N I P    T A+R T
Sbjct: 169 TQQLSRELGGRNIRINAIAPGPIDTEANRTT 199

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 13/201 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VA+VTGA  G+G + A + A  GA+VV  D+ G  +      + AD V       G
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAE---DLKRVADKV-------G 260
Query: 67  GKAVPNYNSVVDG-DKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           G A+    +  D  DKI     E+  G++DI++NNAGI RDK  A + +  W  V  V+L
Sbjct: 261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNL 320
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
               R++     +      GR++  +S +G+ GN GQ NY+  K  ++GL+  L+     
Sbjct: 321 LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLAD 380
Query: 185 NNIHCNVIVP-TAASRLTEDI 204
             I  N + P    +++TE I
Sbjct: 381 KGITINAVAPGFIETKMTEAI 401

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+V ++TG+  GLG+S A+  A   A VVVN    + +        A++V+ EI+  G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE--------ANSVLEEIKKVG 56
Query: 67  GKAVPNYNSV-VDGDKI--VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G+A+     V V+ D I  VQ+A++ FG++D++INNAG+    S   +S +DW  V D +
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTN 116
Query: 124 LTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           LTGAF  SR A  +  + +  G ++  +S    +      +Y+A+K  +  ++ TL++E 
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 183 EKNNIHCNVIVPTA 196
               I  N I P A
Sbjct: 177 APKGIRVNNIGPGA 190

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+ A++TGA  G+G+  AL  AE GA V V           + S A   V  EI   G
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVA---------ARHSDALQVVADEIAGVG 80
Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           GKA+P    V   D++   +       G IDI + NAGI+  ++   +   ++Q +QD +
Sbjct: 81  GKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTN 140
Query: 124 LTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSI 180
           +TG F  ++AA   M  Q   G ++ TAS SG + N  Q  ++Y  +K A+V L+  +++
Sbjct: 141 VTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAV 200
Query: 181 EGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDPPVSFNR 223
           E   + I  N + P      TE + P   Y    ++P +   R
Sbjct: 201 ELAPHQIRVNSVSPGYIR--TELVEPLADYHAL-WEPKIPLGR 240

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+V ++TG+  GLG+S A+  A   A VVVN    + +        A++V+ EI+  G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE--------ANSVLEEIKKVG 56
Query: 67  GKAVPNYNSV-VDGDKI--VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G+A+     V V+ D I  VQ+A++ FG++D++INNAG+    S   +S +DW  V D +
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116
Query: 124 LTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           LTGAF  SR A  +  + +  G ++  +S    +      +Y+A+K  +  ++ TL++E 
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 183 EKNNIHCNVIVPTA 196
               I  N I P A
Sbjct: 177 APKGIRVNNIGPGA 190

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+V ++TG+  GLG+S A+  A   A VVVN    + +        A++V+ EI+  G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE--------ANSVLEEIKKVG 56
Query: 67  GKAVPNYNSV-VDGDKI--VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G+A+     V V+ D I  VQ+A++ FG++D++INNAG+    S   +S +DW  V D +
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116
Query: 124 LTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           LTGAF  SR A  +  + +  G ++  +S    +      +Y+A+K  +  ++ TL++E 
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 183 EKNNIHCNVIVPTA 196
               I  N I P A
Sbjct: 177 APKGIRVNNIGPGA 190

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+V ++TG+  GLG+S A+  A   A VVVN    + +        A++V+ EI+  G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE--------ANSVLEEIKKVG 56
Query: 67  GKAVPNYNSV-VDGDKI--VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G+A+     V V+ D I  VQ+A++ FG++D++INNAG+    S   +S +DW  V D +
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116
Query: 124 LTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           LTGAF  SR A  +  + +  G ++  +S    +      +Y+A+K  +  ++ TL++E 
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEY 176
Query: 183 EKNNIHCNVIVPTA 196
               I  N I P A
Sbjct: 177 APKGIRVNNIGPGA 190

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 68/107 (63%)
Query: 88  ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLV 147
           E  G ++++I NAG+ +D+   R+S+ D+  V + +LTG FRV + A   M +   GR+V
Sbjct: 83  ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVV 142
Query: 148 MTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           + +S  GLLG+ GQANY+A+K  LVG + +L+ E    NI  NV+ P
Sbjct: 143 LISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAP 189

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           +Q    G++A+VTGA  G+G + A   A+ GA++V ND+         + +  D  +A  
Sbjct: 28  DQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDI---------NQELVDRGMAAY 78
Query: 63  RSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           ++ G  A      V D D I   V       G IDI++NNAGI+R      ++   ++ V
Sbjct: 79  KAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQV 138
Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            D+ L   F VS+A  P M K+ +G+++   S    LG    + Y+AAK  L  L+  ++
Sbjct: 139 IDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIA 198
Query: 180 IEGEKNNIHCNVIVP 194
            E  + NI CN I P
Sbjct: 199 SEYGEANIQCNGIGP 213

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+  +VTGA +G+GR+   L A  GAS+V  D         +  +     VA + ++
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVD---------REERLLAEAVAALEAE 53
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V + +     + +   ALE FGR+  V + AG+        +    W+ V  V+LT
Sbjct: 54  AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT 113
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G+F V+R A   +++   G LV+T S +GL G FG A+Y+A K+ +VGL+ TL++E  + 
Sbjct: 114 GSFLVARKAGEVLEEG--GSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARK 170
Query: 186 NIHCNVIVPTAASRLTEDILPPGSY 210
            +  NV++P          LPP ++
Sbjct: 171 GVRVNVLLPGLIQTPMTAGLPPWAW 195

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
            +   G+ +++TGA +G+G + A LL + G+ V+++  G   +              +++
Sbjct: 9   MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIIS--GSNEE--------------KLK 52
Query: 64  SKGGKAVPNYNSVV---DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           S G     NY   V      +     +     +DI++ NAGI  D    R+ D D+  V 
Sbjct: 53  SLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVI 112
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           D++L   F ++R A   M ++ YGR++  +S  G+ GN GQANY A+K  L+G++ +LS 
Sbjct: 113 DINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSY 172
Query: 181 EGEKNNIHCNVIVP 194
           E     I  N + P
Sbjct: 173 EVATRGITVNAVAP 186

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL-----GGQRDGDGKSSKAADTVVA 60
           R +G+VA VTGA  G GRS+A+ LA+ GA ++  D+      G  D    +S   D    
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67
Query: 61  EIRSKGG--KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILR-DKSFARISDT 114
               KG   + V     V D D +   V + +E  GR+DI++ NAGI     +  + S+ 
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVG 173
           DW  + D++L G ++  +A  PHM      G +++T+S  GL       +Y AAK  +VG
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187
Query: 174 LSNTLSIEGEKNNIHCNVIVPT 195
           L     +E  ++ I  N + PT
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPT 209

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VAIVTGA  G+G + A + A  GA VV  D+           ++A   +AE  SK 
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----------ESAAENLAETASKV 280
Query: 67  GKAVPNYNSVVDG--DKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G      +   D   DKI +   ++ G + DI++NNAGI RDK  A + D  W  V  V+
Sbjct: 281 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 340
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L    R++     +      GR++  +S +G+ GN GQ NY+  K  ++G++  L+    
Sbjct: 341 LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLA 400
Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 401 AKGITINAVAP 411

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VAIVTGA  G+G + A + A  GA VV  D+           ++A   +AE  SK 
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----------ESAAENLAETASKV 259
Query: 67  GKAVPNYNSVVDG--DKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G      +   D   DKI +   ++ G + DI++NNAGI RDK  A + D  W  V  V+
Sbjct: 260 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 319
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L    R++     +      GR++  +S +G+ GN GQ NY+  K  ++G++  L+    
Sbjct: 320 LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLA 379
Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 380 AKGITINAVAP 390

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R+A VTG   G+G S    L + G  VV         G G +S      + + ++ G   
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVVA--------GCGPNSPRRVKWLEDQKALGFDF 65
Query: 70  VPNYNSVVDGDKIVQT---ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             +  +V D D   Q         G ID+++NNAGI RD  F +++  DWQ V D +LT 
Sbjct: 66  YASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTS 125
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F V++     M ++ +GR++  +S +G  G FGQ NYS AK  + G + +L+ E     
Sbjct: 126 LFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKG 185
Query: 187 IHCNVIVP 194
           +  N + P
Sbjct: 186 VTVNTVSP 193

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VAIVTGA  G+G + A + A  GA VV  D+           ++A   +AE  SK 
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----------ESAAENLAETASKV 243
Query: 67  GKAVPNYNSVVDG--DKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G      +   D   DKI +   ++ G + DI++NNAGI RDK  A + D  W  V  V+
Sbjct: 244 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 303
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L    R++     +      GR++  +S +G+ GN GQ NY+  K  ++G++  L+    
Sbjct: 304 LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLA 363
Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 364 AKGITINAVAP 374

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VAIVTGA  G+G + A + A  GA VV  D+           ++A   +AE  SK 
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----------ESAAENLAETASKV 251
Query: 67  GKAVPNYNSVVDG--DKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G      +   D   DKI +   ++ G + DI++NNAGI RDK  A + D  W  V  V+
Sbjct: 252 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 311
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L    R++     +      GR++  +S +G+ GN GQ NY+  K  ++G++  L+    
Sbjct: 312 LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLA 371
Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 372 AKGITINAVAP 382

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VAIVTGA  G+G + A + A  GA VV  D+           ++A   +AE  SK 
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----------ESAAENLAETASKV 267
Query: 67  GKAVPNYNSVVDG--DKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G      +   D   DKI +   ++ G + DI++NNAGI RDK  A + D  W  V  V+
Sbjct: 268 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVN 327
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L    R++     +      GR++  +S +G+ GN GQ NY+  K  ++G++  L+    
Sbjct: 328 LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLA 387
Query: 184 KNNIHCNVIVP 194
              I  N + P
Sbjct: 388 AKGITINAVAP 398

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V           +  +   T + E+R  G 
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVC---------ARGEEGLRTTLKELREAGV 75
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG L   + A ++D  W  V + +L
Sbjct: 76  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNL 135
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 136 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 196 ARTGITVNAVCP 207

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V   G          +   T + E+R  G 
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---------EEGLRTTLKELREAGV 71
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG L   + A ++D  W  V + +L
Sbjct: 72  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNL 131
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 132 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 191
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 192 ARTGITVNAVCP 203

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           Q R    +A+VTGAG+G+GR+ ++ LA  GA+V   DL            AA   V  + 
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDL---------DRAAAQETVRLLG 52
Query: 64  SKGGKAVP------NYNSVVDGDKIVQTALEN----FGRI-DIVINNAGILRDKSFARIS 112
             G K  P       + + V   +  +  LE     F R   +V++ AGI +D+    +S
Sbjct: 53  GPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMS 112
Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMAL 171
           + DW  V  V+L G F V++AA   +      G ++  +S  G +GN GQ NY+A+K  +
Sbjct: 113 EDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGV 172
Query: 172 VGLSNTLSIEGEKNNIHCNVIVP 194
           +GL+ T + E  ++ I CN ++P
Sbjct: 173 IGLTQTAARELGRHGIRCNSVLP 195

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 17/188 (9%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F  R  +VTG   G+G + A  LA  G  V V   G        S         E+    
Sbjct: 33  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG--------SGAPKGLFGVEVDVTD 84
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             AV         D+      E+ G ++++++NAG+  D    R+++  ++ V + +LTG
Sbjct: 85  SDAV---------DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTG 135
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AFRV++ A   M++  +GR++  AS SGL G   QANY+A+K  ++G++ +++ E  K N
Sbjct: 136 AFRVAQRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 195
Query: 187 IHCNVIVP 194
           +  NV+ P
Sbjct: 196 VTANVVAP 203

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+V+G   G+G S+   +   GA VV  D+    D +GK+  A     A     
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---LDEEGKAMAAELADAARYVHL 60
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                  + + VD      TA+  FG + +++NNAGIL   +    + T+WQ + DV+LT
Sbjct: 61  DVTQPAQWKAAVD------TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT 114
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G F   RA    MK+   G ++  +S  GL G      Y+A K A+ GL+ + ++E   +
Sbjct: 115 GVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPS 174
Query: 186 NIHCNVIVPTAASRLTEDILP 206
            I  N I P        D +P
Sbjct: 175 GIRVNSIHPGLVKTPMTDWVP 195

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 8/201 (3%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE---I 62
           R  G+VA ++GA  G GRS+A+ LA+ GA ++  D+ G  +         + +      +
Sbjct: 12  RVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLV 71
Query: 63  RSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRD-KSFARISDTDWQL 118
           +    + V     V D + +   V + +E  GR+DI++ NAG+  D +   +I D  WQ 
Sbjct: 72  KDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQD 131
Query: 119 VQDVHLTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
           + D++LTG +   +A  PH +     G +V+T+S  G        +Y AAK  ++GL   
Sbjct: 132 MIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRA 191
Query: 178 LSIEGEKNNIHCNVIVPTAAS 198
            ++E   + I  N ++PT  S
Sbjct: 192 FAVELGPHMIRVNAVLPTQVS 212

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 1   MPEQVRFD--GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTV 58
           M  Q+ FD  GR A+VTG+  GLGR+ A  LA  GA +++N            S+ A TV
Sbjct: 16  MSNQIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGT--------DPSRVAQTV 67
Query: 59  VAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGR-------IDIVINNAGILRDKSFARI 111
             E R+ G  A      V    +I+    E F R       +DI++NNAGI   K    +
Sbjct: 68  -QEFRNVGHDAEAVAFDVTSESEII----EAFARLDEQGIDVDILVNNAGIQFRKPMIEL 122
Query: 112 SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMAL 171
              DWQ V D +LT AF + R A   M  + YG++V   S +  L     A Y+ AK  +
Sbjct: 123 ETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGI 182
Query: 172 VGLSNTLSIEGEKNNIHCNVIVP 194
             L+  ++ E  +  I  N I P
Sbjct: 183 KMLTRAMAAEWAQYGIQANAIGP 205

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 104/216 (48%), Gaps = 15/216 (6%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R +G++AIVTGA +G+GR+ ALL A  GA VVV      R+G+     A   +  EI   
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVT----ARNGN-----ALAELTDEIAGG 55
Query: 66  GGKAVPNYNSVVD---GDKIVQTALENFGRIDIVINNAGILRDK-SFARISDTDWQLVQD 121
           GG+A      V D    + +V+ A+  FG +D   NNAG L      + +S   W+   D
Sbjct: 56  GGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLD 115
Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNTLSI 180
            +LT AF  ++   P +     G L  T+S  G    F G A Y+A+K  L+GL   L++
Sbjct: 116 TNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAV 175
Query: 181 EGEKNNIHCNVIVPTAASRLTEDILPPGSYP-VKGF 215
           E     I  N ++P            PG+ P  +GF
Sbjct: 176 ELGARGIRVNALLPGGTDTPANFANLPGAAPETRGF 211

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 83.6 bits (205), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 17/188 (9%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F  R  +VTG   G+G + A  LA  G  V V   G        S         E+    
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG--------SGAPKGLFGVEVDVTD 64
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             AV         D+      E+ G ++++++NAG+  D    R+++  ++ V + +LTG
Sbjct: 65  SDAV---------DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTG 115
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AFRV++ A   M++  +GR++   S SGL G   QANY+A+K  ++G++ +++ E  K N
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 175
Query: 187 IHCNVIVP 194
           +  NV+ P
Sbjct: 176 VTANVVAP 183

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V           +  +   T + E+R  G 
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVC---------ARGEEGLRTTLKELREAGV 75
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG     + A ++D  W  V + +L
Sbjct: 76  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 135
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 136 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 196 ARTGITVNAVCP 207

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V   G          +   T + E+R  G 
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG---------EEGLRTTLKELREAGV 71
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG     + A ++D  W  V + +L
Sbjct: 72  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 131
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 132 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 191
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 192 ARTGITVNAVCP 203

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V           +  +   T + E+R  G 
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVC---------ARGEEGLRTTLKELREAGV 75
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG     + A ++D  W  V + +L
Sbjct: 76  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 135
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 136 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLEL 195
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 196 ARTGITVNAVCP 207

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V           +  +   T + E+R  G 
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVC---------ARGEEGLRTTLKELREAGV 75
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG     + A ++D  W  V + +L
Sbjct: 76  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 135
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 136 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 196 ARTGITVNAVCP 207

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 21/204 (10%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           VAIVTGA AG+GR+ A   A+ GASVVV DL          S+ A+ V A IR  GGKA+
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDL---------KSEGAEAVAAAIRQAGGKAI 64
Query: 71  PNYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSF-ARISDTDWQLVQDVHLTG 126
               +V D    + +++ AL+ FG+I +++NNAG    K F   +SD +W     ++L  
Sbjct: 65  GLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAF--KLNLFS 122
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            FR+S+ A PHM+K   G ++  +S +G   N   A+Y ++K A+  L+  ++ +     
Sbjct: 123 LFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMG 182
Query: 187 IHCNVIVPTA------ASRLTEDI 204
           I  N I P A      A+ LT +I
Sbjct: 183 IRVNAIAPGAIKTDALATVLTPEI 206

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V           +  +   T + E+R  G 
Sbjct: 5   DSEVALVTGATSGIGLEIARRLGKEGLRVFVC---------ARGEEGLRTTLKELREAGV 55
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG     + A ++D  W  V + +L
Sbjct: 56  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 115
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 116 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 175
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 176 ARTGITVNAVCP 187

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 16/193 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSS--KAADTVVAEIR 63
           R  G+ A+VTGA  G+G++ A  LA  GA+V+V+D+  +      +S  K A  + A+I 
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADIS 62
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             G        SV    K +   ++   G IDI++NNA I+   ++  +    W+ + DV
Sbjct: 63  DPG--------SV----KALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDV 110
Query: 123 HLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +LTG F V+RA    M+     GR++  ASN+   G    A Y AAK  ++G +  L+ E
Sbjct: 111 NLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATE 170
Query: 182 GEKNNIHCNVIVP 194
             K NI  N + P
Sbjct: 171 LGKYNITANAVTP 183

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V           +  +   T + E+R  G 
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVC---------ARGEEGLRTTLKELREAGV 75
Query: 68  KA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A     +  SV + + +V   +E +G +D+++NNAG     + A ++D  W  V + +L
Sbjct: 76  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 135
Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 136 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 196 ARTGITVNAVCP 207

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             GR  +VTG   G+GR  A + A  GA+V V          G+S+   D  VA++   G
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVA---------GRSTADIDACVADLDQLG 58
Query: 67  -GKAVPNYNSVVD---GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
            GK +     V D    D +   A+E FG ID+V  NAG+  D   A ++      +  V
Sbjct: 59  SGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAV 118
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++ G F   +A    +     GR+V+T+S +G + G  G ++Y A K A +G   T +IE
Sbjct: 119 NVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIE 178
Query: 182 GEKNNIHCNVIVPTAASRLTEDILPPG 208
              + I  N I+P   + +TE +L  G
Sbjct: 179 LAPHKITVNAIMP--GNIMTEGLLENG 203

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 18/195 (9%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VA+VTG+G G+G + A+ L   GA VVVN           S+K A+ VV+EI++ 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVN--------YANSTKDAEKVVSEIKAL 66
Query: 66  GGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A+    +   V +  K+   A+ +FG +DI ++N+G++       +++ ++  V  +
Sbjct: 67  GSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG---QANYSAAKMALVGLSNTLS 179
           +  G F V+R A+ H+ +   GR+V+T+SN+    +F     + YS +K A+       S
Sbjct: 127 NTRGQFFVAREAYRHLTEG--GRIVLTSSNTS--KDFSVPKHSLYSGSKGAVDSFVRIFS 182
Query: 180 IEGEKNNIHCNVIVP 194
            +     I  N + P
Sbjct: 183 KDCGDKKITVNAVAP 197

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R  +VTGA  G+GR+ A  LA  G ++ V+     RD  G    A +T+ A + + G   
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHY---HRDAAG----AQETLNAIVANGGNGR 79
Query: 70  VPNYNSV--VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
           + +++        ++++  +   G    V++NAGI RD +F  +S+ DW  V   +L   
Sbjct: 80  LLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSF 139
Query: 128 FRVSR-AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           + V +    P +  +  GR++  +S SG++GN GQ NYSAAK  ++G +  L+IE  K  
Sbjct: 140 YNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRK 199
Query: 187 IHCNVIVP 194
           I  N I P
Sbjct: 200 ITVNCIAP 207

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           RV IVTG G+G+GR+ A L A+ GA VVV D+         +  AA  V  EI SK    
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVADV---------NEDAAVRVANEIGSKAFGV 78
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
             + +S  D +  V+     +GR+D+++NNAG     +   I +  W  +  V++ G F 
Sbjct: 79  RVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFL 138
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
            S+   P  ++   G ++ T S +       +  Y A+K A+  L+   + +  K  I  
Sbjct: 139 CSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRV 198
Query: 190 NVIVP 194
           N + P
Sbjct: 199 NAVAP 203

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 103/195 (52%), Gaps = 18/195 (9%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VA+VTG+G G+G + A+ L   GA VVVN           S+K A+ VV+EI++ 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVN--------YANSTKDAEKVVSEIKAL 66
Query: 66  GGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A+    +   V +  K+   A+ +FG +DI ++N+G++       +++ ++  V  +
Sbjct: 67  GSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG---QANYSAAKMALVGLSNTLS 179
           +  G F V+R A+ H+ +   GR+V+T+SN+    +F     + +S +K A+       S
Sbjct: 127 NTRGQFFVAREAYRHLTEG--GRIVLTSSNTS--KDFSVPKHSLFSGSKGAVDSFVRIFS 182
Query: 180 IEGEKNNIHCNVIVP 194
            +     I  N + P
Sbjct: 183 KDCGDKKITVNAVAP 197

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 1   MPEQVRFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTV 58
           + +Q+   G+V +VTGA    G+G   A   AE GA+V +             ++ A+  
Sbjct: 12  LLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITY--------ASRAQGAEEN 63
Query: 59  VAEIRSKGGKAVPNYNSVVDG----DKIVQTALENFGRIDIVINNAGILRDKSFARISDT 114
           V E+    G     Y   VD     +K+V+  + +FG+ID  I NAG   D      S  
Sbjct: 64  VKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVE 123
Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALV 172
            W  V  V L G F  ++A   H K++  G LV+TAS SG + NF   Q +Y+ AK   +
Sbjct: 124 AWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCI 183
Query: 173 GLSNTLSIE----GEKNNIHCNVI-------VPTAASRLTEDILPPG 208
            ++ +L+ E       N+I    I       VP    +L   ++P G
Sbjct: 184 HMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMG 230

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F  R  +VTG   G+G + A  LA  G  V V   G        S         E     
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG--------SGAPKGLFGVECDVTD 64
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             AV         D+      E+ G ++++++NAG+  D    R+++  ++ V + +LTG
Sbjct: 65  SDAV---------DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTG 115
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AFRV++ A   M++  +GR++   S SG  G   QANY+A+K  ++G++ +++ E  K N
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKAN 175
Query: 187 IHCNVIVP 194
           +  NV+ P
Sbjct: 176 VTANVVAP 183

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  RV ++TG G+GLGR+ A+ LA  GA + + D+  +     K++       AE+ + 
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHL 124
               V + +     +  V    E FGRID   NNAGI  +       +  ++  V  ++L
Sbjct: 70  ----VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 125
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G F         M++Q  G +V TAS  G+ G   Q+ Y+AAK  +VGL+   ++E  +
Sbjct: 126 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGR 185
Query: 185 NNIHCNVIVPTA 196
             I  N I P A
Sbjct: 186 YGIRINAIAPGA 197

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+V+G   G G S+       GA VV  D+    D +GK+  A     A     
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDI---LDEEGKAXAAELADAARYVHL 60
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                  + + VD      TA+  FG + +++NNAGIL   +    + T+WQ + DV+LT
Sbjct: 61  DVTQPAQWKAAVD------TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT 114
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G F   RA     K+   G ++  +S  GL G      Y+A K A+ GL+ + ++E   +
Sbjct: 115 GVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPS 174
Query: 186 NIHCNVIVPTAASRLTEDILP 206
            I  N I P        D +P
Sbjct: 175 GIRVNSIHPGLVKTPXTDWVP 195

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 92/176 (52%), Gaps = 12/176 (6%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+ A+VTG+ AG+G++ A  L   GA+V++N         G+  +  +  + EIR++
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLIN---------GRREENVNETIKEIRAQ 57
Query: 66  GGKAVPNYNSVVD--GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
              A+     V D   ++  Q  +E + ++DI+INN GI     +  I D DW  + +V+
Sbjct: 58  YPDAILQ-PVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVN 116
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           +    R++R+      ++  GR++  AS + +  +   A+YSA K   + LS +L+
Sbjct: 117 IXSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLA 172

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG----DGKSSKAADTVVAE 61
           + +GRVA +TGA  G GR++A+ +A  GA ++  D+ G+       D  S       V  
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67
Query: 62  IRSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           + +   + V       D D   K+V   +   GR+DI++ NAG+   +++  I+  D++ 
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRD 127
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
           V D+++TG +    A  P + +    G +++ +S +G+       +Y+A+K A+ GL+  
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187
Query: 178 LSIEGEKNNIHCNVIVP 194
            + E  K++I  N + P
Sbjct: 188 FAAELGKHSIRVNSVHP 204

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 16/193 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSS--KAADTVVAEIR 63
           R  G+ A+VTGA  G+G++ A  LA  GA+V+V+D+  +      +S  K A  + A+I 
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADIS 62
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             G        SV    K +   ++   G IDI++NNA I+   ++  +    W+ + DV
Sbjct: 63  DPG--------SV----KALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDV 110
Query: 123 HLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +LTG F V+RA     +     GR++  ASN+   G    A Y AAK  ++G +  L+ E
Sbjct: 111 NLTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATE 170
Query: 182 GEKNNIHCNVIVP 194
             K NI  N + P
Sbjct: 171 LGKYNITANAVTP 183

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           E++R D RVAIVTG    +G +    LAE GA V++ DL      +  ++KA    V ++
Sbjct: 7   EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADL-----DEAMATKA----VEDL 57
Query: 63  RSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFAR-ISDTDWQL 118
           R +G         V + + +   V++  E  GR+DI++  AGI   +  A  ++D  W  
Sbjct: 58  RMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLK 117
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALVGLSN 176
             D++L G FR  +A    M +Q  G +V   S SGL+ N    QA Y+A+K  +     
Sbjct: 118 QVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIR 177
Query: 177 TLSIEGEKNNIHCNVIVPT 195
           +L+ E   + I  N + PT
Sbjct: 178 SLAAEWAPHGIRANAVAPT 196

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 5/186 (2%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA++TG+ +G+G + A   A+ GA +V+  +  Q D   +  +AA ++  +   +  +
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVL--VARQVD---RLHEAARSLKEKFGVRVLE 61
Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
              +  +    D +V++   +FG  DI++NNAG   +++    +D  WQ   ++H+  A 
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAV 121
Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
           R++R   P M+ +  G ++  AS   +   + +  Y+  K AL+  S TL+ E  K+NI 
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181
Query: 189 CNVIVP 194
            N I P
Sbjct: 182 VNCINP 187

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 16/191 (8%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           + A++TG+ +G+G + A  LA+ GA++V+N  G   +          TV  E+       
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDE--------IRTVTDEVAGLSSGT 77
Query: 70  VPNYNSVVDGDKIVQTA------LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           V ++ +  D  K  + A       + FG  DI++NNAG+   +         W  +  V+
Sbjct: 78  VLHHPA--DXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN 135
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L+ +F   R A P  KK+ +GR++  AS  GL+ +  ++ Y AAK  + GL+ T+++E  
Sbjct: 136 LSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVA 195
Query: 184 KNNIHCNVIVP 194
           ++ +  N I P
Sbjct: 196 ESGVTVNSICP 206

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 33/201 (16%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A++T    GLG+     L  +G SV V             +  +DT   E   +  K 
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTV-------------TYHSDTTAMETMKETYKD 54
Query: 70  VPNYNSVVDGD--------KIVQTALENFGRIDIVINNAG--ILRDKSFARISDTDWQLV 119
           V      V  D        KIV+ A+ +FG+ID +INNAG  +   K      + +W  +
Sbjct: 55  VEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEM 114
Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN------FGQANYSAAKMALVG 173
              +LT  F + +   P M+KQN+GR++    N G  G         ++ ++AAK+ LV 
Sbjct: 115 IQGNLTAVFHLLKLVVPVMRKQNFGRII----NYGFQGADSAPGWIYRSAFAAAKVGLVS 170
Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
           L+ T++ E  +  I  N++ P
Sbjct: 171 LTKTVAYEEAEYGITANMVCP 191

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 13/197 (6%)
Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           + +R DG+ AI+TGAGAG+G+  A+  A  GASVVV+D+         ++ AA+ VV EI
Sbjct: 5   DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVDEI 55
Query: 63  RSKGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           +  GG+A     +  S  +   +   A+   G++DI++NNAG    K F  +   D++  
Sbjct: 56  QQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRA 114
Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            ++++   F +S+   P M+K   G ++   S +    N    +Y+++K A   L   ++
Sbjct: 115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMA 174
Query: 180 IEGEKNNIHCNVIVPTA 196
            +  + NI  N I P A
Sbjct: 175 FDLGEKNIRVNGIAPGA 191

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 7   FDGRVAIVTGA-GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             G+V +VT A G G+G + A      GA VV++D   +R G+ +  + AD  +  + + 
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD-QLADLGLGRVEA- 77
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V +  S    D ++   +E  GR+D+++NNAG+        ++D +W  V +V LT
Sbjct: 78  ---VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLT 134
Query: 126 GAFRVSRAAWPHMKKQNYGRLVM-TASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
              R +RAA  + +  ++G +++  AS  G      Q++Y+AAK  ++ L+   +IE  +
Sbjct: 135 SVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVE 194
Query: 185 NNIHCNVIVPTAA 197
             +  N + P+ A
Sbjct: 195 FGVRINAVSPSIA 207

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             GR AIVTG   G+G + A  L + GA+V + DL            AA  VVA + + G
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADL---------DVMAAQAVVAGLENGG 60
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                +       D  +Q A++  G  D++  NAG+   +    I+D +W    DV+  G
Sbjct: 61  FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARG 120
Query: 127 AFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
            F  ++ A  H    N  G +V TAS +  +G    A+YSA+K A+ G +  L+ E    
Sbjct: 121 VFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPK 180
Query: 186 NIHCNVIVP 194
           NI  N + P
Sbjct: 181 NIRVNCVCP 189

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 24/197 (12%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG-DGKSSKAADTVVAEIRSKGGK 68
           +V ++TG   GLGR+ A+   +  A VV+N    + +  D K          E+   GG+
Sbjct: 16  KVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKK---------EVEEAGGQ 66
Query: 69  AVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           A+     +V GD         +VQTA++ FG +D++INNAG+        +S  +W  V 
Sbjct: 67  AI-----IVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVI 121
Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           D +LTGAF  SR A  +  + +  G ++  +S   ++      +Y+A+K  +  ++ TL+
Sbjct: 122 DTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLA 181
Query: 180 IEGEKNNIHCNVIVPTA 196
           +E     I  N I P A
Sbjct: 182 LEYAPKGIRVNNIGPGA 198

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 24/197 (12%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG-DGKSSKAADTVVAEIRSKGGK 68
           +V ++TG   GLGR+ A+   +  A VV+N    + +  D K          E+   GG+
Sbjct: 16  KVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKK---------EVEEAGGQ 66
Query: 69  AVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           A+     +V GD         +VQTA++ FG +D++INNAG+        +S  +W  V 
Sbjct: 67  AI-----IVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVI 121
Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           D +LTGAF  SR A  +  + +  G ++  +S   ++      +Y+A+K  +  ++ TL+
Sbjct: 122 DTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLA 181
Query: 180 IEGEKNNIHCNVIVPTA 196
           +E     I  N I P A
Sbjct: 182 LEYAPKGIRVNNIGPGA 198

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 24/197 (12%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG-DGKSSKAADTVVAEIRSKGGK 68
           +V ++TG   GLGR+ A+   +  A VV+N    + +  D K          E+   GG+
Sbjct: 16  KVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKK---------EVEEAGGQ 66
Query: 69  AVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           A+     +V GD         +VQTA++ FG +D++INNAG+        +S  +W  V 
Sbjct: 67  AI-----IVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVI 121
Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           D +LTGAF  SR A  +  + +  G ++  +S   ++      +Y+A+K  +  ++ TL+
Sbjct: 122 DTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLA 181
Query: 180 IEGEKNNIHCNVIVPTA 196
           +E     I  N I P A
Sbjct: 182 LEYAPKGIRVNNIGPGA 198

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--- 63
             G+VA +TGA  G GR++A+ LA  GA ++  DL  Q           + + A ++   
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 64  SKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             G + V     V D + +   +Q  L+  GR+DIV+ NAGI    +     D  W  V 
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVI 126
Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLG----NFGQANYSAAKMALVGLS 175
           DV+LTG +   + A P + KQ   G +V+ +S++GL G    + G   Y AAK  +VGL 
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLM 186
Query: 176 NTLSIEGEKNNIHCNVIVPT 195
              +       I  N I P+
Sbjct: 187 RVYANLLAGQMIRVNSIHPS 206

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 21/201 (10%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--- 66
           +VA+VT +  G+G + A  LA+ GA VVV+          +  +  D  VA ++ +G   
Sbjct: 16  KVALVTASTDGIGFAIARRLAQDGAHVVVSS---------RKQQNVDQAVATLQGEGLSV 66
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTD---WQLVQDVH 123
              V +     D +++V TA++  G IDI+++NA +  +  F  I D     W    D++
Sbjct: 67  TGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAV--NPFFGSIMDVTEEVWDKTLDIN 124
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           +     +++A  P M+K+  G +V+ +S +    + G + Y+ +K AL+GL+ TL+IE  
Sbjct: 125 VKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELA 184
Query: 184 KNNIHCNVIVP----TAASRL 200
             NI  N + P    T+ SR+
Sbjct: 185 PRNIRVNCLAPGLIKTSFSRM 205

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           GR A+VTGAG+G+GR+ A   A  GA V+     G+ DG          V  EI   GG 
Sbjct: 31  GRTAVVTGAGSGIGRAIAHGYARAGAHVLAW---GRTDG-------VKEVADEIADGGGS 80
Query: 69  AVPNYNSVVD--GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           A      + D  G   V   L    R+D+++NNAGI+       +S   W+ V  V+L  
Sbjct: 81  AEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDA 140
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           A+ +SR+    M     GR+V  AS     G    A Y+A+K A+VGL+  L+ E     
Sbjct: 141 AWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRG 200
Query: 187 IHCNVIVP 194
           +  N + P
Sbjct: 201 VGVNALAP 208

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGAG G+G++ AL L + G +V + D          +   A  V +EI   GG A
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADY---------NDATAKAVASEINQAGGHA 53
Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           V     V D D++   V+ A +  G  D+++NNAG+        I+      V ++++ G
Sbjct: 54  VAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKG 113
Query: 127 AFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT----LSIE 181
                +AA    KK+ + G+++   S +G +GN   A YS++K A+ GL+ T    L+  
Sbjct: 114 VIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPL 173
Query: 182 GEKNNIHCNVIVPT 195
           G   N +C  IV T
Sbjct: 174 GITVNGYCPGIVKT 187

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   ++A++TG   G+GR+ A   A  GA + + DL    + +           A IR+ 
Sbjct: 4   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-----------AAIRNL 52
Query: 66  GGKAVPNYNSVV---DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G + +     V    D +   +  +  FGR DI++NNAGI     F  ++   W+   ++
Sbjct: 53  GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEI 112
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++   F +++A  P MK+  +GR++   S +  L      +Y + K A +G +  L+ + 
Sbjct: 113 NVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 172
Query: 183 EKNNIHCNVIVP-------TAASRLTE--DILP 206
            K+ I  N I P       T AS L+   D+LP
Sbjct: 173 GKDGITVNAIAPSLVRTATTEASALSAMFDVLP 205

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G  A+VTG   G+G      LA  GASV             ++ K  +  + + RSKG
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCS---------RNQKELNDCLTQWRSKG 56
Query: 67  GK---AVPNYNSVVDGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
            K   +V + +S  +  +++ T   +F G+++I++NNAGI+  K     +  D+ L+  +
Sbjct: 57  FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI 116
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +   A+ +S  A P +K    G +V  +S SG L    +A Y A K A+  L+  L+ E 
Sbjct: 117 NFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEW 176
Query: 183 EKNNIHCNVIVP-TAASRLTE 202
            K+NI  N + P   A+ L E
Sbjct: 177 AKDNIRVNGVGPGVIATSLVE 197

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M  +   +G  A+VTG   G+G      LA  GASV             ++ K  +  + 
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCS---------RNQKELNDCLT 51
Query: 61  EIRSKGGK---AVPNYNSVVDGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDW 116
           + RSKG K   +V + +S  +  +++ T   +F G+++I++NNAGI+  K     +  D+
Sbjct: 52  QWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDY 111
Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
            L+  ++   A+ +S  A P +K    G +V  +S SG L    +A Y A K A+  L+ 
Sbjct: 112 SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTR 171
Query: 177 TLSIEGEKNNIHCNVIVP-TAASRLTE 202
            L+ E  K+NI  N + P   A+ L E
Sbjct: 172 CLAFEWAKDNIRVNGVGPGVIATSLVE 198

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VAIVTGA  G+G + A  LA  G +VV+N  G         + AA+ V  +I + GGKA
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAG--------KAAAAEEVAGKIEAAGGKA 79
Query: 70  VPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           +     V D     ++  TA E FG +D+++NNAGI    + A   D  +  V  V+L G
Sbjct: 80  LTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKG 139
Query: 127 AFRVSRAAWPHMKKQNYGRLV-MTASNSGLLG-NFGQANYSAAKMALVGLSNTLSIEGEK 184
            F   R A   ++    GR++  + S  GLL  ++G   Y+AAK  +   ++ LS E   
Sbjct: 140 TFNTLREAAQRLRVG--GRIINXSTSQVGLLHPSYGI--YAAAKAGVEAXTHVLSKELRG 195
Query: 185 NNIHCNVIVP 194
            +I  N + P
Sbjct: 196 RDITVNAVAP 205

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F G+   VTGAG G+G + AL   E GA V   D    ++    +++  D          
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMD---------- 54
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              V +   V    ++ Q  L    R+D ++N AGILR  +  ++S  DWQ    V++ G
Sbjct: 55  ---VADAAQVA---QVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGG 108
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AF + +      ++Q  G +V  AS++      G + Y A+K AL  L+ ++ +E   + 
Sbjct: 109 AFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSG 168
Query: 187 IHCNVIVP 194
           + CNV+ P
Sbjct: 169 VRCNVVSP 176

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 14/190 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           + A VTG  +G+G + A  LA RG +V          G  + +K     V  +R+ G   
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVY---------GCARDAKNVSAAVDGLRAAGHDV 75
Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             +   V   D++   V  A+E FG I I++N+AG       A + D  W  V D +LTG
Sbjct: 76  DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTG 135
Query: 127 AFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            FRV+R       M++  +GR+V  AS  G  G    A Y+A+K  +VG + ++  E  K
Sbjct: 136 VFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAK 195
Query: 185 NNIHCNVIVP 194
             I  N + P
Sbjct: 196 TGITVNAVCP 205

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G  A+VTG   G+G +    LA  GA V             ++ K  D  +   R KG
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCS---------RNEKELDECLEIWREKG 69
Query: 67  GK---AVPNYNSVVDGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
                +V +  S  + DK++QT    F G+++I++NNAG++  K     ++ D+ ++   
Sbjct: 70  LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGT 129
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +   A+ +S+ A+P +K    G ++  +S +G       + YSA+K A+  ++ +L+ E 
Sbjct: 130 NFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEW 189
Query: 183 EKNNIHCNVIVP 194
            K+NI  N + P
Sbjct: 190 AKDNIRVNSVAP 201

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 5/186 (2%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA++TG+ +G+G + A   A+ GA +V+  +  Q D   +  +AA ++  +   +  +
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVL--VARQVD---RLHEAARSLKEKFGVRVLE 61
Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
              +  +    D +V++   +FG  DI++NNAG   +++    +D  WQ   ++ +  A 
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAV 121
Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
           R++R   P M+ +  G ++  AS   +   + +  Y+  K AL+  S TL+ E  K+NI 
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181
Query: 189 CNVIVP 194
            N I P
Sbjct: 182 VNCINP 187

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M       G+ A+VTG+  GLG +YA  LA  GA V++ND+        +++  A++V  
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDI--------RATLLAESVDT 52
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFG----RIDIVINNAGILRDKSFARISDTDW 116
             R KG  A      V D +  ++ A          +DI+INNAGI   K    +   +W
Sbjct: 53  LTR-KGYDAHGVAFDVTD-ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENW 110
Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           Q V D +LT AF VSR+A   M  +N  G+++   S +        A Y+AAK  +  L+
Sbjct: 111 QKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLT 170
Query: 176 NTLSIEGEKNNIHCNVIVP 194
            +++ E  + NI  N I P
Sbjct: 171 CSMAAEWAQFNIQTNAIGP 189

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A+VTG   G+GR+ A  L  RG  V +      R+ +  +           +S G   
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAI----ASRNPEEAA-----------QSLGAVP 47
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
           +P      D   +V+ ALE  G + ++++ A +   K    +S  +W+ V  +HL  AF 
Sbjct: 48  LPTDLEKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFL 107
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLL--GNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
           +++AA PHM +  +GR++   S +     G      Y+ AK AL+GL+  L+ E  +  I
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 188 HCNVIVPTAASRLTEDILP 206
             N++ P      TE  LP
Sbjct: 168 RVNLLCPGYVE--TEFTLP 184

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M      +GR A+VTGA  GLG++ A+ LA  GA VV             + +A D  + 
Sbjct: 1   MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVC-----------AARRAPDETLD 49
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            I   GG A        D     + +  + G  DI++NNAGI+R       S+ DW  V 
Sbjct: 50  IIAKDGGNASALLIDFAD-PLAAKDSFTDAG-FDILVNNAGIIRRADSVEFSELDWDEVM 107
Query: 121 DVHLTGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           DV+L   F  ++A A   + K   G++V  AS     G     +Y+AAK  + GL+  L+
Sbjct: 108 DVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLA 167
Query: 180 IEGEKNNIHCNVIVP 194
            E     I+ N I P
Sbjct: 168 NEWAAKGINVNAIAP 182

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSK---AADTVV---AEIR 63
           RVAIVTGA +G G + A     RG  V   DL  +   +   +     AD V+   A++ 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT---DWQLVQ 120
            +G           D +  +   +E FG ID+++NNAGI  +     +  T    +  V 
Sbjct: 63  DEG-----------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVM 111
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            V++ G F   RA  PHM  Q  G +V  AS + L+   G++ Y+ +K A++ L+ ++++
Sbjct: 112 AVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAV 171
Query: 181 EGEKNNIHCNVIVP 194
           +   + I CN + P
Sbjct: 172 DYAGSGIRCNAVCP 185

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+Q   + R+ +VTGA  G+GR  A+  A  GA+V++          G++ +    V + 
Sbjct: 7   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILL---------GRNEEKLRQVASH 57
Query: 62  IRSKGGKAVPNY-------NSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT 114
           I  + G+  P +        +  D  ++ Q    N+ R+D V++NAG+L D     +S+ 
Sbjct: 58  INEETGRQ-PQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGD--VCPMSEQ 114
Query: 115 D---WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMAL 171
           D   WQ V  V++   F +++A  P + K + G LV T+S+ G  G      Y+A+K A 
Sbjct: 115 DPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFAT 174
Query: 172 VGLSNTLSIEGEKNNIHCNVIVP 194
            G+   L+ E ++  +  N I P
Sbjct: 175 EGMMQVLADEYQQ-RLRVNCINP 196

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V ++TGA  G+G   A  L   GA ++   LG +R          + +  EIR  GG A
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKIL---LGARRQAR------IEAIATEIRDAGGTA 55
Query: 70  VPNYNSVVDGDKIV---QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           +     V D   +    Q A++ +GRID+++NNAG++     A +   +W+ + DV++ G
Sbjct: 56  LAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKG 115
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
                 A  P M+ Q  G+++   S   L      A Y A K A+  +S+ L  E     
Sbjct: 116 VLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQESTNIR 175
Query: 187 IHC 189
           + C
Sbjct: 176 VTC 178

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F G+  +VTG   G+GR+ A   A  GA V + DL      +GK          E+    
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGK----------EVAEAI 49
Query: 67  GKAVPNYNSVVDGDKI--VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           G A    +   + +++  V+ A    GR+D+++NNA I    S   +   +W+ V +V+L
Sbjct: 50  GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 109
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           T    +S  A   M+K   G +V  AS  GL      A Y+A+K  LV L+ +L+++   
Sbjct: 110 TAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAP 169
Query: 185 NNIHCNVIVPTAASRLTEDIL 205
             I  N + P A +  TE +L
Sbjct: 170 LRIRVNAVAPGAIA--TEAVL 188

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 28/194 (14%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           ++AIVTGAG+G+GR+ A+ LA  G  V    L G+R        A     AEI   G  A
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVA---LAGRR------LDALQETAAEI---GDDA 76
Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGI------LRDKSFARISDTDWQLVQ 120
           +     V D D +       +E FGR+D++ NNAG         D +FA+     W+ V 
Sbjct: 77  LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQ-----WKQVV 131
Query: 121 DVHLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           D +LTG F  ++ A+   K Q    GR++   S S        A Y+A K A+ GL+ + 
Sbjct: 132 DTNLTGPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKST 191
Query: 179 SIEGEKNNIHCNVI 192
           S++G  ++I C  I
Sbjct: 192 SLDGRVHDIACGQI 205

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V +VTGA +G GR+ A      G +V+         G  + ++A D +VA   +   +A
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVI---------GTARRTEALDDLVA---AYPDRA 53
Query: 70  VPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                 V DG++I   A   L  +GR+D+++NNAG  +  +F   ++ + + + ++H+ G
Sbjct: 54  EAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFG 113
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
             R++RA  P  +++  G +V  +S  G L   G + YSA K AL  LS  L+ E     
Sbjct: 114 PARLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFG 173
Query: 187 IHCNVIVPTA 196
           I   ++ P A
Sbjct: 174 IKVLIVEPGA 183

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSK 65
             G+VAIVTG   G+G++    L E G++VV+     +R        AAD + A +  +K
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLER-----LKSAADELQANLPPTK 70
Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             + +P   N  +  + + +V++ L+ FG+I+ ++NN G         IS   W  V + 
Sbjct: 71  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLET 130
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLV--MTASNSGLLGNFGQANYS-AAKMALVGLSNTLS 179
           +LTG F + +A +    K++ G +V  +  + +G    F  A +S AA+  +  L+ +L+
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG----FPLAVHSGAARAGVYNLTKSLA 186
Query: 180 IEGEKNNIHCNVIVP 194
           +E   + I  N + P
Sbjct: 187 LEWACSGIRINCVAP 201

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 23/201 (11%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGD--------GKSSKAADT 57
           RF  +VAI+TG+  G+GR+ A+L A  GA V +     +R  +        G S +  ++
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 58  VVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL----RDKSFARISD 113
           VVA++ +  G+           D+I+ T L  FG++DI++NNAG      + K+    S 
Sbjct: 63  VVADVTTDAGQ-----------DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSI 111
Query: 114 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
             +    +++L     +++ A PH+       + +++  SGL        YS AK A+  
Sbjct: 112 ESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQ 171
Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
            +   +I+  ++ I  N I P
Sbjct: 172 YTRNTAIDLIQHGIRVNSISP 192

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+Q   + R+ +VTGA  G+GR  A+  A  GA+V++          G++ +    V + 
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILL---------GRNEEKLRQVASH 55
Query: 62  IRSKGGKAVPNY-------NSVVDGDKIVQTALENFGRIDIVINNAGILRDKS-FARISD 113
           I  + G+  P +        +  +  ++ Q    N+ R+D V++NAG+L D    +  + 
Sbjct: 56  INEETGRQ-PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNP 114
Query: 114 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
             WQ V  V++   F +++A  P + K + G LV T+S+ G  G      Y+A+K A  G
Sbjct: 115 QVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEG 174
Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
           +   L+ E ++  +  N I P
Sbjct: 175 MMQVLADEYQQ-RLRVNCINP 194

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 4   QVRFD--GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           +V FD   R  +VTG   G+GR  A + A  GA+V V           +S +   +V AE
Sbjct: 34  KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVA---------ARSPRELSSVTAE 84
Query: 62  IRSKGGK-------AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT 114
           +   G          V +  S  D  +   T ++ FG +D+V  NAGI  +     ++  
Sbjct: 85  LGELGAGNVIGVRLDVSDPGSCADAAR---TVVDAFGALDVVCANAGIFPEARLDTMTPE 141
Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYSAAKMALVG 173
               V DV++ G     +A    +     GR+++T+S +G + G  G ++Y A+K A +G
Sbjct: 142 QLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLG 201
Query: 174 LSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGF 215
              T +IE     +  N I+P   + LTE ++  G   + G 
Sbjct: 202 FMRTAAIELAPRGVTVNAILP--GNILTEGLVDMGEEYISGM 241

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           +   G+ A VTG   G+G + A  LA  GA+V +  +         +++ A  VV+EI  
Sbjct: 27  ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV--------NAAERAQAVVSEIEQ 78
Query: 65  KGGKAVPNYNSVVDGDKIVQT---ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
            GG+AV       D + I Q     +E  G +DI++N+AGI         +  D+  V  
Sbjct: 79  AGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXA 138
Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNTLSI 180
           V+    F   R+A  H+   + GR++   SN   L  + G + YSA+K AL GL+  L+ 
Sbjct: 139 VNFRAPFVAIRSASRHLG--DGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLAR 196
Query: 181 EGEKNNIHCNVIVP 194
           +     I  N++ P
Sbjct: 197 DLGPRGITVNIVHP 210

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGD--------GKSS 52
           MP   RF  +  I+TG+  G+GR+ A+L A+ GA+V +     +R  +        G S 
Sbjct: 1   MP---RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSE 57
Query: 53  KAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARIS 112
           K  ++VVA++ ++ G+           D+I+ + L+ FG+ID+++NNAG     +F   +
Sbjct: 58  KQVNSVVADVTTEDGQ-----------DQIINSTLKQFGKIDVLVNNAGAAIPDAFGT-T 105
Query: 113 DTD-----WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN---Y 164
            TD     +     ++L     +++   PH+     G +V  +S   + G   Q +   Y
Sbjct: 106 GTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSI--VAGPQAQPDFLYY 162
Query: 165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           + AK AL   + + +I+  K  I  N + P
Sbjct: 163 AIAKAALDQYTRSTAIDLAKFGIRVNSVSP 192

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVV---AEIRSK 65
           G VA++TG  +GLG + A  L  +GAS V+ DL     G+ ++ K  +  V   A++ S 
Sbjct: 12  GLVAVITGGASGLGLATAERLVGQGASAVLLDL-PNSGGEAQAKKLGNNCVFAPADVTS- 69
Query: 66  GGKAVPNYNSVVDGDKIVQTALE----NFGRIDIVINNAGI-LRDKSF-----ARISDTD 115
                         +K VQTAL      FGR+D+ +N AGI +  K++        +  D
Sbjct: 70  --------------EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED 115
Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAAKM 169
           +Q V DV+L G F V R     M +         G ++ TAS +   G  GQA YSA+K 
Sbjct: 116 FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKG 175
Query: 170 ALVGLSNTLSIEGEKNNIHCNVIVP 194
            +VG++  ++ +     I    I P
Sbjct: 176 GIVGMTLPIARDLAPIGIRVMTIAP 200

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVV---AEIRSK 65
           G VA++TG  +GLG + A  L  +GAS V+ DL     G+ ++ K  +  V   A++ S 
Sbjct: 10  GLVAVITGGASGLGLATAERLVGQGASAVLLDL-PNSGGEAQAKKLGNNCVFAPADVTS- 67
Query: 66  GGKAVPNYNSVVDGDKIVQTALE----NFGRIDIVINNAGI-LRDKSF-----ARISDTD 115
                         +K VQTAL      FGR+D+ +N AGI +  K++        +  D
Sbjct: 68  --------------EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED 113
Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAAKM 169
           +Q V DV+L G F V R     M +         G ++ TAS +   G  GQA YSA+K 
Sbjct: 114 FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKG 173
Query: 170 ALVGLSNTLSIEGEKNNIHCNVIVP 194
            +VG++  ++ +     I    I P
Sbjct: 174 GIVGMTLPIARDLAPIGIRVMTIAP 198

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVV---AEIRSK 65
           G VA++TG  +GLG + A  L  +GAS V+ DL     G+ ++ K  +  V   A++ S 
Sbjct: 10  GLVAVITGGASGLGLATAERLVGQGASAVLLDL-PNSGGEAQAKKLGNNCVFAPADVTS- 67
Query: 66  GGKAVPNYNSVVDGDKIVQTALE----NFGRIDIVINNAGI-LRDKSF-----ARISDTD 115
                         +K VQTAL      FGR+D+ +N AGI +  K++        +  D
Sbjct: 68  --------------EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED 113
Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAAKM 169
           +Q V DV+L G F V R     M +         G ++ TAS +   G  GQA YSA+K 
Sbjct: 114 FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKG 173
Query: 170 ALVGLSNTLSIEGEKNNIHCNVIVP 194
            +VG++  ++ +     I    I P
Sbjct: 174 GIVGMTLPIARDLAPIGIRVMTIAP 198

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M E     GRVA+VTG   GLG   A  LAE G SVVV      R+ + ++S+AA  +  
Sbjct: 13  MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVV----ASRNLE-EASEAAQKLTE 67
Query: 61  E--IRSKGGKA-VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           +  + +   +  V NY  V    K+++   E FG++D V+N AGI R          +++
Sbjct: 68  KYGVETMAFRCDVSNYEEV---KKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFR 124
Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS---NSGLLGNFGQANYSAAKMALVGL 174
            V +V+L G + V R A+  +++ +   ++   S       + N   + Y+A+K  +  L
Sbjct: 125 QVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI--SAYAASKGGVASL 182
Query: 175 SNTLSIEGEKNNIHCNVIVP-TAASRLTEDIL 205
           +  L+ E  +  I  NVI P    +++TE + 
Sbjct: 183 TKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF 214

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +P   R  G    +TGA  G+G++ AL  A+ GA++V+     Q     K      T   
Sbjct: 37  LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP--HPKLLGTIYTAAE 94
Query: 61  EIRSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           EI + GGKA+P    V D  +I   V+ A++ FG IDI++NNA  +   +          
Sbjct: 95  EIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLD 154
Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLV 147
           L+ +V+  G +  S+A  P++KK     ++
Sbjct: 155 LMMNVNTRGTYLASKACIPYLKKSKVAHIL 184

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 90  FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMT 149
            GR+DIV+NNAG++        +D DW L   V++   FR+ RAA P       G +V  
Sbjct: 92  LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNV 151
Query: 150 ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGS 209
           AS  GL    G A Y   K AL  L+     +     I  N + P   + +    L  G 
Sbjct: 152 ASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCP---NEVNTPXLRTG- 207
Query: 210 YPVKGFDP 217
           +  +GFDP
Sbjct: 208 FAKRGFDP 215

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+Q     R+ +VTGA  G+GR  AL  A  GA+V++  LG   +   K  + A  +  E
Sbjct: 7   PKQDLLQNRIILVTGASDGIGREAALTYARYGATVIL--LGRNEE---KLRRVAQHIADE 61
Query: 62  IRSKGGKAVPNYNSVVDGDKIVQTALE----------NFGRIDIVINNAGILRDKSFARI 111
              +     P + ++   D +  TA E          ++ R+D V++NAG+L +     +
Sbjct: 62  QHVQ-----PQWFTL---DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGE--IGPM 111
Query: 112 SDTD---WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK 168
           S+ D   WQ V  V++   F +++A  P + K + G LV T+S+ G  G      Y+ +K
Sbjct: 112 SEQDPQIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSK 171
Query: 169 MALVGLSNTLSIEGEKNNIHCNVIVP 194
            A  G+   L+ E +  ++  N I P
Sbjct: 172 FATEGMMQVLADEYQNRSLRVNCINP 197

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 29/183 (15%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G VA++TG  +GLG S A  L  +GA+ V+ D+    + +G++         E +  GG 
Sbjct: 9   GLVAVITGGASGLGLSTAKRLVGQGATAVLLDV---PNSEGET---------EAKKLGGN 56
Query: 69  AVPNYNSVVDGDKIVQTAL----ENFGRIDIVINNAGI------LRDKSFARISDTDWQL 118
            +    +V   +K VQ AL    E FGRID+ +N AGI        +K     +  D+Q 
Sbjct: 57  CIFAPANVTS-EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQR 115
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
           V +V+L G F V R     M +         G ++ TAS +   G  GQA YSA+K  +V
Sbjct: 116 VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV 175
Query: 173 GLS 175
           G++
Sbjct: 176 GMT 178

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 29/183 (15%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G VA++TG  +GLG S A  L  +GA+ V+ D+    + +G++         E +  GG 
Sbjct: 10  GLVAVITGGASGLGLSTAKRLVGQGATAVLLDV---PNSEGET---------EAKKLGGN 57
Query: 69  AVPNYNSVVDGDKIVQTAL----ENFGRIDIVINNAGI------LRDKSFARISDTDWQL 118
            +    +V   +K VQ AL    E FGRID+ +N AGI        +K     +  D+Q 
Sbjct: 58  CIFAPANVTS-EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQR 116
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
           V +V+L G F V R     M +         G ++ TAS +   G  GQA YSA+K  +V
Sbjct: 117 VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV 176
Query: 173 GLS 175
           G++
Sbjct: 177 GMT 179

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 29/183 (15%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G VA++TG  +GLG S A  L  +GA+ V+ D+    + +G++         E +  GG 
Sbjct: 10  GLVAVITGGASGLGLSTAKRLVGQGATAVLLDV---PNSEGET---------EAKKLGGN 57
Query: 69  AVPNYNSVVDGDKIVQTAL----ENFGRIDIVINNAGI------LRDKSFARISDTDWQL 118
            +    +V   +K VQ AL    E FGRID+ +N AGI        +K     +  D+Q 
Sbjct: 58  CIFAPANVTS-EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQR 116
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
           V +V+L G F V R     M +         G ++ TAS +   G  GQA YSA+K  +V
Sbjct: 117 VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV 176
Query: 173 GLS 175
           G++
Sbjct: 177 GMT 179

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 3   EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           +Q   + R+ +VTGA  G+GR  A+  A  GA+V++          G++ +    V + I
Sbjct: 4   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILL---------GRNEEKLRQVASHI 54
Query: 63  RSKGGKAVPNY-------NSVVDGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDT 114
             + G+  P +        +  +  ++ Q  + N+ R+D V++NAG+L D    +  +  
Sbjct: 55  NEETGRQ-PQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQ 113
Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            WQ V  +++   F +++A  P + K + G LV T+S+ G  G      Y+A+K A  G+
Sbjct: 114 VWQDVMQINVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGM 173
Query: 175 SNTLSIEGEKNNIHCNVIVP 194
              L+ E ++  +  N I P
Sbjct: 174 MQVLADEYQQ-RLRVNCINP 192

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           VA++TGAG+G+GR+ AL LA  G +V            G++    + V  EI   GG+A+
Sbjct: 30  VALITGAGSGIGRATALALAADGVTV---------GALGRTRTEVEEVADEIVGAGGQAI 80
Query: 71  PNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDT---DWQLVQDVHL 124
                V D  +    V+  +  FG +DIV+ NAGI  +  +A I D    +W     V+L
Sbjct: 81  ALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGI--NGVWAPIDDLKPFEWDETIAVNL 138
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSG--LLGNFGQANYSAAKMALVGLSNTLSIEG 182
            G F       P++K++  G +V+ +S +G       G   Y+A K A V +   L++E 
Sbjct: 139 RGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALEL 198
Query: 183 EKNNIHCNVIVPTA 196
            K++I  N + P A
Sbjct: 199 GKHHIRVNAVCPGA 212

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-- 67
            + ++TGAG G+GR+ AL  A   A+    D         +++   + +  E R++G   
Sbjct: 3   HILLITGAGKGIGRAIALEFAR--AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT 60
Query: 68  -KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                + + + D  ++    +E +G ID ++NNAG+ R  + + +++ D+    + +L G
Sbjct: 61  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKG 120
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F +++A +  M++Q+ G +    S +        + Y  +K    GL  T+ +   K N
Sbjct: 121 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180
Query: 187 IHCNVIVPTA 196
           +    + P A
Sbjct: 181 VRITDVQPGA 190

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           +R DG+ A++TG+  G+GR++A      GA V + D+         + +AA    AEI  
Sbjct: 1   MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADI---------NLEAARATAAEIGP 51
Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
                  +       D+ V   L+ +G IDI++NNA +        I+   +  +  +++
Sbjct: 52  AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINV 111
Query: 125 TGA-FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           +G  F +   A   +     G+++  AS +G  G      Y A K A++ L+ +  +   
Sbjct: 112 SGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI 171
Query: 184 KNNIHCNVIVP 194
           ++ I+ N I P
Sbjct: 172 RHGINVNAIAP 182

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 13  IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP- 71
           ++TGA  G+G + A LL  +G  V +           +  K    + AE+  +G   +P 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLM---------ARDEKRLQALAAEL--EGALPLPG 57
Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVS 131
           +     D  + V    E FG +  ++NNAG+   K    ++  +W+LV D +LTGAF   
Sbjct: 58  DVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGI 117
Query: 132 RAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNV 191
           R A P + ++  G +V   S +G     G A Y+A+K  L+GL+    ++  + N+    
Sbjct: 118 RHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVN 177
Query: 192 IVP 194
           ++P
Sbjct: 178 VLP 180

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F  +VAIVTG  +G+G +    L   GA VV   L  + D +       D         
Sbjct: 11  EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVT------- 63
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                   N     + + +T  + +GRIDI++NNAGI +           W+ + DV++ 
Sbjct: 64  --------NEEEVKEAVEKTT-KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVN 114
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G++ +++   P M    +G ++  AS          A Y  +K AL+GL+ +++I+    
Sbjct: 115 GSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAID-YAP 173
Query: 186 NIHCNVIVP 194
            I CN + P
Sbjct: 174 KIRCNAVCP 182

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           + G+  +VTG  +G+G + A+  AE GA VV   L    D DG  +     +  E     
Sbjct: 9   YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGL----DADGVHAPRHPRIRRE----- 59
Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                    + D  ++ Q   E   R+D+++NNAGI RD+    ++   ++ V  ++L+ 
Sbjct: 60  ------ELDITDSQRL-QRLFEALPRLDVLVNNAGISRDREEYDLAT--FERVLRLNLSA 110
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           A   S+ A P + ++  G ++  AS     G+  +  YSA+K A+V L+ +L+ E     
Sbjct: 111 AMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAER 169
Query: 187 IHCNVIVP 194
           I  N I P
Sbjct: 170 IRVNAIAP 177

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+V I+T A  G+G++ AL  A  GA V+  D+   +  + +      T V ++  K
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK 62
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
             K +  + + V+             R+D++ N AG +   +     + DW    ++++ 
Sbjct: 63  --KQIDQFANEVE-------------RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR 107
Query: 126 GAFRVSRAAWPHMKKQNYGRLV-MTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
             + + +A  P M  Q  G ++ M++  S + G   +  YS  K A++GL+ +++ +  +
Sbjct: 108 SMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQ 167
Query: 185 NNIHCNVIVP 194
             I CN + P
Sbjct: 168 QGIRCNCVCP 177

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 33/230 (14%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V ++TG   G+G + ALL A +G +V VN           +S AAD VV +IR  GG+A
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVN--------YASNSAAADEVVRQIREAGGQA 77
Query: 70  VPNYNSVVDGDKIV---QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ---DVH 123
           +     V    +++   +T     GR+  ++NNAG++   +  R+     + +Q   +++
Sbjct: 78  LAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTT--RVDGITLERLQRXFEIN 135
Query: 124 LTGAFRVSRAAWPHMKKQ---NYGRLVMTASNSGLLGNFGQ-ANYSAAKMAL----VGLS 175
           + G+F  +R A      +   + G +V  +S +  LG+ GQ  +Y+AAK A+    +GL+
Sbjct: 136 VFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLA 195
Query: 176 NTLSIEGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFD--PPVSFNR 223
             ++ EG    I  N + P     +  DI   G  P +  D  P V   R
Sbjct: 196 KEVATEG----IRVNAVRP---GIIETDIHASGGLPNRARDVAPQVPXQR 238

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            + +VA+VT +  G+G + A  LA+ GA VVV+          +  +  D  VA ++ +G
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSS---------RKQENVDRTVATLQGEG 62
Query: 67  ---GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTD---WQLVQ 120
                 V +     D +++V  A+   G +DI+++NA +  +  F  I D     W  + 
Sbjct: 63  LSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDATEEVWDKIL 120
Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL--LGNFGQANYSAAKMALVGLSNTL 178
            V++     +++A  P M+K+  G +++ +S        N G   Y+ +K AL+GL+  L
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKNL 178
Query: 179 SIEGEKNNIHCNVIVP 194
           ++E    NI  N + P
Sbjct: 179 AVELAPRNIRVNCLAP 194

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF G+  I+TG+  G+GRS A++ A+ GA V +      R  + K       V AE   K
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAE---K 79
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL- 124
               V +       D I+ T L  FG+IDI++NNAG       A ++D      Q V L 
Sbjct: 80  INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAG-------ANLADGTANTDQPVELY 132
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASN--------SGLLGNFGQANYSAAKMALVGLSN 176
              F+++  A   M ++    L+ T           +G   + G   Y+ AK AL   + 
Sbjct: 133 QKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR 192
Query: 177 TLSIEGEKNNIHCNVIVPTAAS 198
             +I+  ++ +  N + P A +
Sbjct: 193 CTAIDLIQHGVRVNSVSPGAVA 214

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VAI+TG   G+G + A    E GA V++ D    R  D    KAA +V    + +
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITD----RHSD-VGEKAAKSVGTPDQIQ 57
Query: 66  GGKAVPNYNSVVDG-DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
                 + +S  DG  K+     + FG +  ++NNAGI  +KS    +  +W+ +  V+L
Sbjct: 58  ---FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNL 114
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFGQANYSAAKMALVGLSNTLSIEG- 182
            G F  +R     MK +  G  ++  S+  G +G+     Y+A+K A+  +S + +++  
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 183 -EKNNIHCNVIVPTAASRLTEDILP 206
            +  ++  N + P        D LP
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLP 199

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+ TGAG G+GR  A+ L  RGASVVVN         G SSKAA+ VVAE++  G +
Sbjct: 21  GKVALTTGAGRGIGRGIAIELGRRGASVVVN--------YGSSSKAAEEVVAELKKLGAQ 72
Query: 69  AVPNYNSVVDGDKIV---QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
            V     +    ++V     A+ +FG +D V++N+G+        ++   +  V +++  
Sbjct: 73  GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR 132
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQANYSAAKMALVGLSNTLSIEGEK 184
           G F V++    H ++   GR+++T+S + ++ G    A Y+ +K A+ G     +++   
Sbjct: 133 GQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGA 190
Query: 185 NNIHCNVIVP 194
             +  N I P
Sbjct: 191 KGVTVNCIAP 200

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           ++  G VA++TG  +GLGR+        GA V V D   +R  + + +   + V      
Sbjct: 1   MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAV------ 54
Query: 65  KGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGI------LRDKSFARISDTDWQL 118
                V +  S+ D  +  +  L  FG+ID +I NAGI      L D    +I D  +  
Sbjct: 55  ---GVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKI-DAAFDD 110
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           +  V++ G     +A  P +     G +V T SN+G   N G   Y+A K A+VGL   +
Sbjct: 111 IFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQM 169
Query: 179 SIE 181
           + E
Sbjct: 170 AFE 172

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             GR+A+VTG   G+G+  A  L E GA V +      RD +      ADT         
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFIC----ARDAE----ACADTATRLSAYGD 78
Query: 67  GKAVP-NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
            +A+P + +S     ++ Q   E   R+DI++NNAG     +      + W+ V  +++T
Sbjct: 79  CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVT 138
Query: 126 GAFRVSRAAWPHMKK----QNYGRLVMTASNSGLLGNFGQA-NYSAAKMALVGLSNTLSI 180
             F   +   P +++    +N  R++   S +G+     QA  Y  +K AL  LS  L+ 
Sbjct: 139 SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAK 198
Query: 181 EGEKNNIHCNVIVP-TAASRLTEDI 204
           E    +I+ NVI P    SR+T  I
Sbjct: 199 ELVGEHINVNVIAPGRFPSRMTRHI 223

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           +G+VA+VTGA  G+GR++A  L  +GA V + D   +    G   KAA     E +    
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA---GVQCKAALHEQFEPQ---- 58
Query: 68  KAVPNYNSVVDGDKIVQT---ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           K +     V D  ++  T    +++FGR+DI++NNAG+  +K        +W+    ++L
Sbjct: 59  KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK--------NWEKTLQINL 110
Query: 125 TGAFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
                 +     +M KQN G    ++  +S +GL+    Q  Y A+K  +VG + + ++ 
Sbjct: 111 VSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA 170
Query: 182 GEKNN--IHCNVIVP 194
               N  +  N I P
Sbjct: 171 ANLMNSGVRLNAICP 185

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V IVTGA  G+GR+ A    + G+ V+  DL     G+ K       V    + K    
Sbjct: 9   KVVIVTGASMGIGRAIAERFVDEGSKVI--DLSIHDPGEAKYDHIECDVTNPDQVKAS-- 64
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
                        +    + +G I +++NNAGI        +S  +W+ + DV+L G + 
Sbjct: 65  -------------IDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYY 111
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
            S+ A P+M +     +V  +S    +     + Y  +K A++GL+ +++++     + C
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALD-YAPLLRC 170
Query: 190 NVIVP 194
           N + P
Sbjct: 171 NAVCP 175

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VAI+TG   G+G + A    E GA V++   G   D   K++K+  T        
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMIT--GRHSDVGEKAAKSVGT------PD 54
Query: 66  GGKAVPNYNSVVDG-DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
             +   + +S  DG  K+     + FG +  ++NNAGI  +KS    +  +W+ +  V+L
Sbjct: 55  QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNL 114
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFGQANYSAAKMALVGLSNTLSIEG- 182
            G F  +R     MK +  G  ++  S+  G +G+     Y+A+K A+  +S + +++  
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 183 -EKNNIHCNVIVPTAASRLTEDILP 206
            +  ++  N + P        D LP
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLP 199

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
            P+Q   + R+ +VTGA  G+GR  A   A  GA+V++          G++ +    V +
Sbjct: 25  QPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILL---------GRNEEKLRQVAS 75
Query: 61  EIRSKGGKAVPNY-------NSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISD 113
            I  + G+  P +        +  +  ++ Q  + N+ R+D V++NAG+L D       +
Sbjct: 76  HINEETGRQ-PQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQN 134
Query: 114 TD-WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
              WQ V  +++   F +++A  P + K + G LV T+S+ G  G      Y+A+K A  
Sbjct: 135 PQVWQDVXQINVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATE 194
Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
           G    L+ E ++  +  N I P
Sbjct: 195 GXXQVLADEYQQ-RLRVNCINP 215

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V IVTGA  G+GR+ A    + G+ V+  DL     G+ K       V    + K    
Sbjct: 16  KVVIVTGASMGIGRAIAERFVDEGSKVI--DLSIHDPGEAKYDHIECDVTNPDQVKAS-- 71
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
                        +    + +G I +++NNAGI        +S  +W+ + DV+L G + 
Sbjct: 72  -------------IDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYY 118
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
            S+ A P+M +     +V  +S    +     + Y  +K A++GL+ +++++     + C
Sbjct: 119 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALD-YAPLLRC 177
Query: 190 NVIVP 194
           N + P
Sbjct: 178 NAVCP 182

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
            P+Q   + R+ +VTGA  G+GR  A   A  GA+V++          G++ +    V +
Sbjct: 4   QPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILL---------GRNEEKLRQVAS 54
Query: 61  EIRSKGGKAVPNY-------NSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISD 113
            I  + G+  P +        +  +  ++ Q    N+ R+D V++NAG+L D       +
Sbjct: 55  HINEETGRQ-PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQN 113
Query: 114 TD-WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
              WQ V  V++   F +++A  P + K + G LV T+S+ G  G      Y+A+K A  
Sbjct: 114 PQVWQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATE 173
Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
           G    L+ E ++  +  N I P
Sbjct: 174 GXXQVLADEYQQ-RLRVNCINP 194

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 1   MPEQVR-FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVV 59
           MP++ +   G + ++TGAG G+GR  A   A+  + +V+ D+         +    +   
Sbjct: 22  MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI---------NKHGLEETA 72
Query: 60  AEIRSKGGKAVPNYNSVVDG---DKIVQTALE---NFGRIDIVINNAGILRDKSFARISD 113
           A+ +  G K    +  VVD    + I  +A +     G + I++NNAG++         D
Sbjct: 73  AKCKGLGAKV---HTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQD 129
Query: 114 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
              +   +V++   F  ++A  P M K N+G +V  AS +G +       Y ++K A VG
Sbjct: 130 PQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVG 189
Query: 174 LSNTLSIE 181
              TL+ E
Sbjct: 190 FHKTLTDE 197

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 25/187 (13%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           ++  G   ++TG  +GLGR+        GA V V D   +R             +AE+ +
Sbjct: 1   MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAER-------------LAELET 47
Query: 65  KGGK----AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARIS------DT 114
             G      V +  S+ D  +     +  FG+ID +I NAGI  D S A +       D 
Sbjct: 48  DHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIW-DYSTALVDLPEESLDA 106
Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            +  V  +++ G     +A  P +     G ++ T SN+G   N G   Y+AAK A+VGL
Sbjct: 107 AFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGL 165
Query: 175 SNTLSIE 181
              L+ E
Sbjct: 166 VRELAFE 172

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRD---GDGKSSKAADTVVAEIR 63
             G+VA++TGA +G+G + A  LA  GA+V +     ++    GD  ++  A   V E+ 
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               + V         D  V + +E  G +DI++NNAGI+          TDW  + D +
Sbjct: 65  VADRQGV---------DAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTN 115
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L G   ++RAA PH+ +   G +V  +S +G +     A Y A K  +   S TL  E  
Sbjct: 116 LLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174
Query: 184 KNNIHCNVIVP 194
           +  +   VI P
Sbjct: 175 ERGVRVVVIEP 185

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
            P+Q     R+ +VTGA  G+GR  AL  A  GA+V++  LG   +   K  + A  +  
Sbjct: 7   QPKQDLLQNRIILVTGASDGIGREAALTYARYGATVIL--LGRNEE---KLRRVAQHIAD 61
Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALE----------NFGRIDIVINNAGILRDKSFAR 110
           E   +     P + ++   D +  TA E          ++ R+D V++NAG+L +     
Sbjct: 62  EQHVQ-----PQWFTL---DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXS 113
Query: 111 ISDTD-WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM 169
             D   WQ V  V++   F +++A  P + K + G LV T+S+ G  G      Y+ +K 
Sbjct: 114 EQDPQIWQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKF 173
Query: 170 ALVGLSNTLSIEGEKNNIHCNVIVP 194
           A  G    L+ E +  ++  N I P
Sbjct: 174 ATEGXXQVLADEYQNRSLRVNCINP 198

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VAIVTGAGAG+G + A  LA+ G  V+  D+ G       +          +      
Sbjct: 29  GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVD----- 83
Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
            V +   ++    +V   +  FG +D ++ NAG++   S    +  D+  V  ++L GA+
Sbjct: 84  -VSDEQQII---AMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAW 139
Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
             ++ A P M ++  G +V  +S +G +   G   Y  +K  ++ LS   + E   + I 
Sbjct: 140 LCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIR 199
Query: 189 CNVIVP 194
            N ++P
Sbjct: 200 SNTLLP 205

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           + A+VTG+  G+G++ A+ LAE G ++V+N          +S KAA     EI   G K 
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINY--------ARSKKAALETAEEIEKLGVKV 56
Query: 70  V---PNYNSVVDGDKIVQTALENFGRIDIVINNA--GILRDKSFARISDTDWQLVQDVHL 124
           +    N        ++ Q   E FGR+D+ +NNA  G+LR      + +T W    +++ 
Sbjct: 57  LVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLR--PVMELEETHWDWTMNINA 114
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGL--LGNFGQANYSAAKMALVGLSNTLSIEG 182
                 ++ A   M+K   G +V  +S   +  L N+     S  K AL  L+  L++E 
Sbjct: 115 KALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVS--KAALEALTRYLAVEL 172
Query: 183 EKNNIHCNVI 192
               I  N +
Sbjct: 173 SPKQIIVNAV 182

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+  I+TG   GLG   A      GA VV+ D+    D +G ++          R  G
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATA---------RELG 50
Query: 67  GKAVPNYNSVV---DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             A   +  V    D  ++V  A E FG +D ++NNAGI         S   ++ V +++
Sbjct: 51  DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEIN 110
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           LTG F   +   P MK    G +V  +S +GL+G    ++Y A+K  + GLS   ++E  
Sbjct: 111 LTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 184 KNNIHCNVIVP 194
            + I  N + P
Sbjct: 171 TDRIRVNSVHP 181

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+  I+TG   GLG   A      GA VV+ D+    D +G ++          R  G
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATA---------RELG 50
Query: 67  GKAVPNYNSVV---DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             A   +  V    D  ++V  A E FG +D ++NNAGI         S   ++ V +++
Sbjct: 51  DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEIN 110
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           LTG F   +   P MK    G +V  +S +GL+G    ++Y A+K  + GLS   ++E  
Sbjct: 111 LTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 184 KNNIHCNVIVP 194
            + I  N + P
Sbjct: 171 TDRIRVNSVHP 181

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P  +   G+   ++G   G+G + A  +A  GA+V +  +    +   K      T   E
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVAL--VAKSAEPHPKLPGTIYTAAKE 59
Query: 62  IRSKGGKAVPNYNSVVDGDKIVQT---ALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           I   GG+A+P    + DGD +       +E FG IDI +NNA  +   S   +    + L
Sbjct: 60  IEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDL 119
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQN 142
           +  + + G + VS++  PHMK ++
Sbjct: 120 MNGIQVRGTYAVSQSCIPHMKGRD 143

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P  +     VA+VTG  +GLG +    L + GA VVV D+ G+             VVA+
Sbjct: 2   PGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE------------DVVAD 49
Query: 62  IRSKGGKAVPNYNSVVDGDKIVQTAL---ENFGRIDIVINNAG-------ILRDKSFARI 111
           +  +   A  +    V  +  V +AL   E  G + IV+N AG       + RD  F   
Sbjct: 50  LGDRARFAAAD----VTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVF--- 102
Query: 112 SDTDWQLVQDVHLTGAFRVSRAAWPHMKK--------QNYGRLVMTASNSGLLGNFGQAN 163
           S   ++ + D++L G+F V R A   + K        +  G ++ TAS +   G  GQA 
Sbjct: 103 SLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAA 162
Query: 164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           YSA+K  +VG++  ++ +   + I    I P
Sbjct: 163 YSASKGGVVGMTLPIARDLASHRIRVMTIAP 193

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P  +  +G+VA++TGAG+G G   A   A+ GA VV+ D    RD  G     A+ V  E
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVD----RDKAG-----AERVAGE 52
Query: 62  IRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISD-TDWQLVQ 120
           I         + +   D D  V+ AL  FG++DI++NNAGI      A + +  ++  + 
Sbjct: 53  IGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIV 112
Query: 121 DVHLTGAFRVSRAAWPHMK----KQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
            V++ G + ++    PH K    K     ++  AS          A Y+A K  +V ++ 
Sbjct: 113 GVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTK 172
Query: 177 TLSIEGEKNNIHCNVIVPTA 196
            L+IE     I    + P A
Sbjct: 173 ALAIELAPAKIRVVALNPVA 192

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V +++G G  LG + A   AE+GA +V+           ++ +  + V  ++   G +A
Sbjct: 12  KVVVISGVGPALGTTLARRCAEQGADLVLA---------ARTVERLEDVAKQVTDTGRRA 62
Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD-VHLT 125
           +     + D  ++   V   ++ +GR+D+VINNA   R  S    ++T ++ ++D + LT
Sbjct: 63  LSVGTDITDDAQVAHLVDETMKAYGRVDVVINNA--FRVPSMKPFANTTFEHMRDAIELT 120
Query: 126 --GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM---ALVGLSNTLSI 180
             GA R+ +   P + +++ G +V   S   ++    QA Y A KM   AL+ +S TL+ 
Sbjct: 121 VFGALRLIQGFTPAL-EESKGAVVNVNS---MVVRHSQAKYGAYKMAKSALLAMSQTLAT 176
Query: 181 EGEKNNIHCNVIVP 194
           E  +  I  N ++P
Sbjct: 177 ELGEKGIRVNSVLP 190

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 17/191 (8%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVND------LGGQRDGDGKSSKAADTVVAEIR 63
           +VA +TG G+G+G   A +    G   V+        L   R   G + +    +  ++R
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR 87
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
                A P   + VD       AL+ FGRIDI+IN A          +S   ++ V D+ 
Sbjct: 88  -----APPAVMAAVD------QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDID 136
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
            +G F VSR  +    + + G +V   +  G  G   Q +  +AK A+  ++  L++E  
Sbjct: 137 TSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG 196
Query: 184 KNNIHCNVIVP 194
             NI  N + P
Sbjct: 197 PQNIRVNSLAP 207

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R +G+ A++TG+  G+GR++A      GA+V + D+  +R         A    AEI   
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIER---------ARQAAAEI--- 52
Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A      V   D I   +   +E+ G +DI++NNA +        I+   ++ +  +
Sbjct: 53  GPAAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAI 112
Query: 123 HLTGA-FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++ G  F +  AA   + +   G+++  AS +G  G    A Y A K A++ L+ +  ++
Sbjct: 113 NVAGTLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLD 172
Query: 182 GEKNNIHCNVIVP 194
             K+ I+ N I P
Sbjct: 173 LIKHRINVNAIAP 185

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+  ++TG  +G+GR+ ++  A+ GA++ +  L    +GD   +K        +  +
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL--DEEGDANETKQY------VEKE 95
Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINN-AGILRDKSFARISDTDW 116
           G K V     ++ GD         IVQ  +   G ++I++NN A     +    I+    
Sbjct: 96  GVKCV-----LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL 150
Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +    +++   F V++AA  H+K+ +   ++ TAS     GN    +YSA K A+V  + 
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQGDV--IINTASIVAYEGNETLIDYSATKGAIVAFTR 208
Query: 177 TLSIEGEKNNIHCNVIVP 194
           +LS    +  I  N + P
Sbjct: 209 SLSQSLVQKGIRVNGVAP 226

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 26  ALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD--KIV 83
           A L    GA VV+ D+    D  G+       V   I S    +  + +   D D   +V
Sbjct: 33  AKLFVRYGAKVVIADIA---DDHGQK------VCNNIGSPDVISFVHCDVTKDEDVRNLV 83
Query: 84  QTALENFGRIDIVINNAGILRDKSFARIS--DTDWQLVQDVHLTGAFRVSRAAWPHMKKQ 141
            T +   G++DI+  N G+L    ++ +   + D++ V D+++ GAF V++ A   M   
Sbjct: 84  DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA 143
Query: 142 NYGRLVMTASNSGLLGNFGQAN-YSAAKMALVGLSNTLSIEGEKNNIHCNVIVP-TAASR 199
             G +V TAS S      G ++ Y+A K A++GL+ +L  E  +  I  N + P   AS 
Sbjct: 144 KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASP 203
Query: 200 LTEDIL 205
           L  D+ 
Sbjct: 204 LLTDVF 209

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+  ++TG  +G+GR+ ++  A+ GA++ +  L    +GD   +K        +  +
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL--DEEGDANETKQY------VEKE 95
Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINN-AGILRDKSFARISDTDW 116
           G K V     ++ GD         IVQ  +   G ++I++NN A     +    I+    
Sbjct: 96  GVKCV-----LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL 150
Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +    +++   F V++AA  H+K+ +   ++ TAS     GN    +YSA K A+V  + 
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQGDV--IINTASIVAYEGNETLIDYSATKGAIVAFTR 208
Query: 177 TLSIEGEKNNIHCNVIVP 194
           +LS    +  I  N + P
Sbjct: 209 SLSQSLVQKGIRVNGVAP 226

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA VTG+  G+G + A   A+ GA V +            +S  AD     ++   G 
Sbjct: 34  GKVASVTGSSGGIGWAVAEAYAQAGADVAI----------WYNSHPADEKAEHLQKTYGV 83
Query: 69  AVPNYNSVVDGDKIVQTAL----ENFGRIDIVINNAGILRDKSFARISDT--DWQLVQDV 122
               Y   +   K V+  +    ++FG ID+ + NAG+   +      D    W  +  V
Sbjct: 84  HSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISV 143
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--QANYSAAKMALVGLSNTLSI 180
            L G +  S       KK   G L++T+S SG + N    QA Y+ AK A   L+ +L+I
Sbjct: 144 DLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAI 203
Query: 181 E 181
           E
Sbjct: 204 E 204

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 80  DKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHM 138
           +K++QT    FG ++DI+INN G +R K     +  D+      +L  A+ +S+ A P +
Sbjct: 79  EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLL 138
Query: 139 KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTA-A 197
           K    G ++  +S +G++     + YSA K AL  L+  L+ E   + I  N + P   A
Sbjct: 139 KASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIA 198
Query: 198 SRLTEDI 204
           + L E +
Sbjct: 199 TPLAEAV 205

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+V +VTGA  G+GR  AL L + GA+V +          G+       V  E +S G
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYIT---------GRHLDTLRVVAQEAQSLG 53
Query: 67  GKAVPNYNSVVDGDK-------IVQTALENFGRIDIVINNA-----GIL--RDKSFARIS 112
           G+ VP    V D  +         Q   E  GR+D+++NNA      IL  R+K+F    
Sbjct: 54  GQCVP---VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETP 110
Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALV 172
            + W  + +V L G +  S      M     G L++  S+ G L       Y   K A  
Sbjct: 111 ASMWDDINNVGLRGHYFCSVYGARLMVPAGQG-LIVVISSPGSLQYMFNVPYGVGKAACD 169
Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
            L+   + E  ++ + C  + P
Sbjct: 170 KLAADCAHELRRHGVSCVSLWP 191

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 13/191 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQR---DGDGKSSKAADTVVAEIR 63
             G+VA++TGA +G+G + A  LA  GA+V +     ++    GD  ++  A   V E+ 
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               + V         D  V + +E  G +DI++NNAGI           TDW    D +
Sbjct: 65  VADRQGV---------DAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTN 115
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L G    +RAA PH+ +   G +V  +S +G +     A Y A K  +   S TL  E  
Sbjct: 116 LLGLXYXTRAALPHLLRSK-GTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174
Query: 184 KNNIHCNVIVP 194
           +  +   VI P
Sbjct: 175 ERGVRVVVIEP 185

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA+VTGA  G+G + A  L   GA VV+           +  +    V  EI + G
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLT---------ARDVEKLRAVEREIVAAG 77
Query: 67  GKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDV 122
           G+A  +   +   D I   A   L   GR D+++NNAG+         +   +W  +  V
Sbjct: 78  GEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L   + + RA  P M     G ++  +S +G       A Y+A+K  L GL  + + E 
Sbjct: 138 NLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEEL 197
Query: 183 EKNNIHCNVIVP 194
            ++ +  +++ P
Sbjct: 198 RQHQVRVSLVAP 209

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGAS-----VVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           V ++TG  +G+G   A+ LA   +        + DL  Q    G+  +AA  +     S 
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ----GRLWEAARALACPPGS- 58
Query: 66  GGKAVPNYNSVVDGDKIVQTALENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               +      V   K V  A E    GR+D+++ NAG+        + +     V DV+
Sbjct: 59  ----LETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVN 114
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G  R+ +A  P MK++  GR+++T S  GL+G      Y A+K AL GL  +L++   
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174
Query: 184 KNNIHCNVI 192
              +H ++I
Sbjct: 175 PFGVHLSLI 183

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGAS-----VVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           V ++TG  +G+G   A+ LA   +        + DL  Q    G+  +AA  +     S 
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ----GRLWEAARALACPPGS- 58
Query: 66  GGKAVPNYNSVVDGDKIVQTALENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               +      V   K V  A E    GR+D+++ NAG+        + +     V DV+
Sbjct: 59  ----LETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVN 114
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G  R+ +A  P MK++  GR+++T S  GL+G      Y A+K AL GL  +L++   
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174
Query: 184 KNNIHCNVI 192
              +H ++I
Sbjct: 175 PFGVHLSLI 183

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGAS-----VVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           V ++TG  +G+G   A+ LA   +        + DL  Q    G+  +AA  +     S 
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ----GRLWEAARALACPPGS- 58
Query: 66  GGKAVPNYNSVVDGDKIVQTALENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               +      V   K V  A E    GR+D+++ NAG+        + +     V DV+
Sbjct: 59  ----LETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVN 114
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G  R+ +A  P MK++  GR+++T S  GL+G      Y A+K AL GL  +L++   
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174
Query: 184 KNNIHCNVI 192
              +H ++I
Sbjct: 175 PFGVHLSLI 183

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGAS-----VVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           V ++TG  +G+G   A+ LA   +        + DL  Q    G+  +AA  +     S 
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ----GRLWEAARALACPPGS- 58
Query: 66  GGKAVPNYNSVVDGDKIVQTALENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               +      V   K V  A E    GR+D+++ NAG+        + +     V DV+
Sbjct: 59  ----LETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVN 114
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G  R+ +A  P MK++  GR+++T S  GL+G      Y A+K AL GL  +L++   
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174
Query: 184 KNNIHCNVI 192
              +H ++I
Sbjct: 175 PFGVHLSLI 183

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P   R+  R+A+VTGA  G+G + A  L ++G  VV         G  ++    + + AE
Sbjct: 25  PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVV---------GCARTVGNIEELAAE 75
Query: 62  IRSKG--GKAVPNYNSVVDGDKIVQ--TALEN-FGRIDIVINNAGILRDKSFARISDTDW 116
            +S G  G  +P    + + + I+   +A+ +    +DI INNAG+ R  +    S + W
Sbjct: 76  CKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGW 135
Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSG--LLGNFGQANYSAAKMALV 172
           + + +V++      +R A+  MK++N   G ++   S SG  +L       YSA K A+ 
Sbjct: 136 KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVT 195
Query: 173 GLSNTLSIEGEKNNIH 188
            L+  L  E  +   H
Sbjct: 196 ALTEGLRQELREAQTH 211

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 39/216 (18%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDG---KSSKAADTVVAEI 62
           R   +V +VTG   G GRS+A+ LAE GA +++ D+    + +     +S+  +    E+
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 63  RSKGGKAVPNYNSVVD------GDKIVQTALENFGRIDIVINNAGI------LRDKSFAR 110
              G KA   Y + VD        + +  A+  FG++D+V+ NAGI      L  ++FA 
Sbjct: 67  EKTGRKA---YTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFAD 123
Query: 111 ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------GNF 159
             D D+         G      AA P++       ++ T S +GL+              
Sbjct: 124 AFDVDF--------VGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGP 173
Query: 160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPT 195
           G A YS AK  +   +  L+ +    +I  NVI PT
Sbjct: 174 GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPT 209

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 91  GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTA 150
           GR+D+++ NAG+        + +     V DV++ G  R+ +A  P MK++  GR+++T 
Sbjct: 82  GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTG 141
Query: 151 SNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVI 192
           S  GL+G      Y A+K AL GL  +L++      +H ++I
Sbjct: 142 SVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLI 183

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Query: 13  IVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPN 72
           +V  A  G+GR+ A +L++ GA V +      R+ +         VV ++R         
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTI----CARNEELLKRSGHRYVVCDLR--------- 69
Query: 73  YNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSR 132
                   K +    E    +DI++ NAG  +   F  +++ D++   D       ++ R
Sbjct: 70  --------KDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 121
Query: 133 AAWPHMKKQNYGRLVMTASNSGL--LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCN 190
              P MK++ +GR+V   S S +  + N   +N  +A+MAL G   TLS E     I  N
Sbjct: 122 NYLPAMKEKGWGRIVAITSFSVISPIENLYTSN--SARMALTGFLKTLSFEVAPYGITVN 179
Query: 191 VIVP--TAASRLTE 202
            + P  T   R+ E
Sbjct: 180 CVAPGWTETERVKE 193

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGAS-----VVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           V ++TG  +G+G   A+ LA   +        + DL  Q    G+  +AA  +     S 
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ----GRLWEAARALACPPGS- 58
Query: 66  GGKAVPNYNSVVDGDKIVQTALENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
               +      V   K V  A E    GR+D+++ NAG+        + +     V +V+
Sbjct: 59  ----LETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLEVN 114
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G  R+ +A  P MK++  GR+++T S  GL+G      Y A+K AL GL  +L++   
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174
Query: 184 KNNIHCNVI 192
              +H ++I
Sbjct: 175 PFGVHLSLI 183

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  R  +V GAG  +GR+ A+  A+ GA+VV+       +G  + +  A   + ++   
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLT-----YNGAAEGAATAVAEIEKLGRS 59
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNA-GILRDKSFARISDTDWQLVQDVHL 124
                 +  +  + +  +  A + FG I  +++ A G++  K+ A + +  W  V DV+L
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL 119
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNTLSIE-G 182
           T  F  ++ A P M K   G +V  +S +G  G   G   Y+ +K A++  +  L+ E G
Sbjct: 120 TSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177
Query: 183 EKNNIHCNVIVPTAASRLTEDIL 205
            K  I  N + P   S    D  
Sbjct: 178 PK--IRVNAVCPGMISTTFHDTF 198

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 39/198 (19%)
Query: 10  RVAIVTGA----GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +V ++TGA    GAGL R+Y                   RD + +       VVA  RS 
Sbjct: 29  KVVVITGASQGIGAGLVRAY-------------------RDRNYR-------VVATSRSI 62
Query: 66  GGKAVPNYNSVV-------DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
              A P+ ++V          D+IV+  +E FGRID ++NNAG+   K F   +  D+  
Sbjct: 63  KPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDH 122
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--QANYSAAKMALVGLSN 176
              V++ G F +++ A     KQ  G +V   ++       G   A  S  K  L  ++ 
Sbjct: 123 NLGVNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTR 182
Query: 177 TLSIEGEKNNIHCNVIVP 194
           +L+ E  ++ +  N + P
Sbjct: 183 SLAXEFSRSGVRVNAVSP 200

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           +GR+A+VTG G G+GR  A  L+  G SVV+          G+     D    EI  + G
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVIT---------GRRPDVLDAAAGEIGGRTG 82
Query: 68  KAV-PNYNSVVDGDKIV---QTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDV 122
             V      V D D++          F R+D+++NNAG  +       ++   W  +   
Sbjct: 83  NIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAA 142
Query: 123 HLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           +LTGAF  ++ A+   K Q    GR++   S S        A Y+A K A+ GL+ + ++
Sbjct: 143 NLTGAFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTAL 202
Query: 181 EGEKNNIHCNVI 192
           +G  ++I C  I
Sbjct: 203 DGRXHDIACGQI 214

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG  A VTGAG+G+G       A  GA +++ D         + + A D    E+ + 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILID---------REAAALDRAAQELGAA 58
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               +    +  +         E    + I++N+AGI R        D  W+ V  V++ 
Sbjct: 59  VAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVD 118
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSIEGE 183
           G F  SRA    M  +  G +V   S SG + N  Q  ++Y A+K A+  L+  L+ E  
Sbjct: 119 GMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWA 178
Query: 184 KNNIHCNVIVP 194
              +  N + P
Sbjct: 179 GRGVRVNALAP 189

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             + +VAI+TGA  G+G   + +LA  GA VV+ DL  + D  G ++      V      
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADL-PETDLAGAAASVGRGAVHH---- 62
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL--RDKSFARISDTDWQLVQDVH 123
               V +  + V    ++   ++ FGR+DIV NNA      D    +++   W     V+
Sbjct: 63  ----VVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN 118
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
             G   + + A P +     G +V  +S +          Y+  K A+  L+  ++ +  
Sbjct: 119 ARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYG 178
Query: 184 KNNIHCNVIVP 194
           ++ + CN I P
Sbjct: 179 RHGVRCNAIAP 189

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 17/195 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   R A+VTG  +G+GR+ A+  A  GA V +N L  + +        A  V A I   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEED-------AQQVKALIEEC 98
Query: 66  GGKAVPNYNSVVD---GDKIVQTALENFGRIDIVINNAGILRDKSFARISD-TDWQLVQD 121
           G KAV     + D      +V  A E  G +DI+   AG  +  +   I D T  Q  Q 
Sbjct: 99  GRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAG--KQTAIPEIKDLTSEQFQQT 156
Query: 122 --VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             V++   F +++ A P + K     ++ T+S      +    +Y+A K A++  S  L+
Sbjct: 157 FAVNVFALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLA 214
Query: 180 IEGEKNNIHCNVIVP 194
            +  +  I  N++ P
Sbjct: 215 KQVAEKGIRVNIVAP 229

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVN-------DLGGQRDGDGKSSKAADTVV 59
             G++A+VT   +GLG + AL LA  GA +++        +    R     S    D V 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 60  AEIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
            +IR  G           D D++ + A  + G  DI++ + G  R   F  +   DW   
Sbjct: 65  GDIREPG-----------DIDRLFEKA-RDLGGADILVYSTGGPRPGRFMELGVEDWDES 112
Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             +    A  V R A   M ++ +GR+V   S + L      A  +  ++ ++G+  TL+
Sbjct: 113 YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLA 172
Query: 180 IEGEKNNIHCNVIVPT 195
           +E   + +  N ++P+
Sbjct: 173 LELAPHGVTVNAVLPS 188

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 32/206 (15%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +F+G  AIV+G   GLG +    L   G  VV+ DL  +     K    AD +       
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAE-----KGKALADEL------- 74
Query: 66  GGKAVPNYNSVVDGDKIVQT--ALENFGRIDIVINNAG--------ILRDKSFARISDTD 115
           G +A     +V   D ++    A    GR+   +   G        + RD S A +    
Sbjct: 75  GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGG-- 132
Query: 116 WQLVQDVHLTGAFRVSR-------AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK 168
           +    D++L G + V+R       AA P    +  G LV+TAS +G  G  GQ  Y+AAK
Sbjct: 133 FTKTIDLYLNGTYNVARLVAASIAAAEPRENGER-GALVLTASIAGYEGQIGQTAYAAAK 191
Query: 169 MALVGLSNTLSIEGEKNNIHCNVIVP 194
             ++GL+   + +     I  N I P
Sbjct: 192 AGVIGLTIAAARDLSSAGIRVNTIAP 217

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F GR A VTG   G+G      L  +G  V + D+            + D  +A + ++G
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI---------RQDSIDKALATLEAEG 56
Query: 67  -GKAVPNYNSVV---DGDKIVQTALE-NFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
            G  V      V   +G K+    +E  FG + I+ NNAG+   +     S  DW  +  
Sbjct: 57  SGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLG 116
Query: 122 VHLTGAFRVSRAAWPHM------KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           V+L G         P M       +Q  G +V TAS +  L       Y+  K A+ GLS
Sbjct: 117 VNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLS 176
Query: 176 NTLSIEGEKNNIHCNVIVP 194
            +L     K  I  +V+ P
Sbjct: 177 ESLHYSLLKYEIGVSVLCP 195

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R + ++A++TGA +G+G + A      GA V +          G+     D  +AEI   
Sbjct: 26  RLNAKIAVITGATSGIGLAAAKRFVAEGARVFIT---------GRRKDVLDAAIAEI--- 73
Query: 66  GGKAV---PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG AV    +  ++ + D++ +      GRID++  NAG         +++  +    D 
Sbjct: 74  GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDR 133
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++ G     + A P + + +   +V+T S +G  G    + Y+A+K AL   +    ++ 
Sbjct: 134 NVKGVLFTVQKALPLLARGS--SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDL 191
Query: 183 EKNNIHCNVIVP 194
           +   I  N + P
Sbjct: 192 KDRGIRINTLSP 203

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           + G+ AIV G   G G +    L E GA V+   L G+ + +          +A IR + 
Sbjct: 6   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVL---LTGRNESN----------IARIREEF 52
Query: 67  GKAVPNYNS-VVDGDKIV---QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  V    S + D ++I      A +  G ID++  NAG+   + F ++S+  +     V
Sbjct: 53  GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAV 112
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +  GAF   +   P +++   G +V T+S +   G+ G + YSA+K ALV  ++ L+ E 
Sbjct: 113 NTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAEL 170
Query: 183 EKNNIHCNVIVP 194
               I  N + P
Sbjct: 171 LPRGIRVNSVSP 182

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           + G+ AIV G   G G +    L E GA V+   L G+ + +          +A IR + 
Sbjct: 5   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVL---LTGRNESN----------IARIREEF 51
Query: 67  GKAVPNYNS-VVDGDKIV---QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  V    S + D ++I      A +  G ID++  NAG+   + F ++S+  +     V
Sbjct: 52  GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAV 111
Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +  GAF   +   P +++   G +V T+S +   G+ G + YSA+K ALV  ++ L+ E 
Sbjct: 112 NTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAEL 169
Query: 183 EKNNIHCNVIVP 194
               I  N + P
Sbjct: 170 LPRGIRVNSVSP 181

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           ++ ++TGA +G+G + A   +E G  ++   L  +R    K+    +T+ A++       
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLL---LLARRVERLKALNLPNTLCAQV------- 66
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
             +       D  +  A + +G  D ++NNAG++           +WQ + DV++ G   
Sbjct: 67  --DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLN 124
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
             +A    MK +N G ++  +S +G       A Y   K A+  +S  +  E   +N+  
Sbjct: 125 GMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRV 184
Query: 190 NVIVPTAASRLTEDILPPGSYPVK-GFD 216
             I P+A    TE +    S  +K G+D
Sbjct: 185 MTIAPSAVK--TELLSHTTSQQIKDGYD 210

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTV--VAEIR 63
           R   +  ++TGA AG+G++ AL   E              +GD K   AA  +  + E++
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEAS------------NGDMKLILAARRLEKLEELK 77
Query: 64  SKGGKAVPNYN------SVVDGDKI---VQTALENFGRIDIVINNAG-ILRDKSFARISD 113
               +  PN         +   +KI   ++   + F  IDI++NNAG  L      +I+ 
Sbjct: 78  KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIAT 137
Query: 114 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
            D Q V D ++T    +++A  P  + +N G +V   S +G       + Y A+K A+  
Sbjct: 138 EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGA 197
Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
            +++L  E     I   +I P
Sbjct: 198 FTDSLRKELINTKIRVILIAP 218

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R  IVTG G G+G+   L   E G  V   D+  +R  D    +            G  A
Sbjct: 3   RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP-----NLFYFHGDVA 57
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
            P     +   K V+ A+E   RID+++NNA        + +   ++  +  V L   + 
Sbjct: 58  DP-----LTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYE 112
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           +SR     + K N GR++  AS            Y++AK  +V L++ L++
Sbjct: 113 LSRLCRDELIK-NKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAM 162

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +A   VVA 
Sbjct: 4   PEMLQ--GKKVIVTGASKGIGREIAYHLAKMGAHVVVT---------ARSKEALQKVVAR 52
Query: 62  IRSKGGKAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +      +   +   ++ V  A    G +D++I N  +    +F      + +
Sbjct: 53  CLELGAASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVR 112
Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
              +V+      +S AA P M  Q+ G + + +S +G +     A YSA+K AL G  +T
Sbjct: 113 KSMEVNFHSFVVLSVAAMP-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFST 171
Query: 178 LSIEGEKNNIHCNV 191
           L  E   N ++ ++
Sbjct: 172 LRSEFLVNKVNVSI 185

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +A   VVA 
Sbjct: 27  PEMLQ--GKKVIVTGASKGIGREIAYHLAKMGAHVVVT---------ARSKEALQKVVAR 75
Query: 62  IRSKGGKAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +      +   +   ++ V  A    G +D++I N  +    +F      + +
Sbjct: 76  CLELGAASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVR 135
Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
              +V+      +S AA P M  Q+ G + + +S +G +     A YSA+K AL G  +T
Sbjct: 136 KSMEVNFHSFVVLSVAAMP-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFST 194
Query: 178 LSIEGEKNNIHCNV 191
           L  E   N ++ ++
Sbjct: 195 LRSEFLVNKVNVSI 208

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +A   VVA 
Sbjct: 6   PEMLQ--GKKVIVTGASKGIGREIAYHLAKMGAHVVVT---------ARSKEALQKVVAR 54
Query: 62  IRSKGGKAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +      +   +   ++ V  A    G +D++I N  +    +F      + +
Sbjct: 55  CLELGAASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVR 114
Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
              +V+      +S AA P M  Q+ G + + +S +G +     A YSA+K AL G  +T
Sbjct: 115 KSMEVNFHSFVVLSVAAMP-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFST 173
Query: 178 LSIEGEKNNIHCNV 191
           L  E   N ++ ++
Sbjct: 174 LRSEFLVNKVNVSI 187

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +A   VVA 
Sbjct: 6   PEMLQ--GKKVIVTGASKGIGREIAYHLAKMGAHVVVT---------ARSKEALQKVVAR 54
Query: 62  IRSKGGKAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +      +   +   ++ V  A    G +D++I N  +    +F      + +
Sbjct: 55  CLELGAASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVR 114
Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
              +V+      +S AA P M  Q+ G + + +S +G +     A YSA+K AL G  +T
Sbjct: 115 KSMEVNFHSFVVLSVAAMP-MLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFST 173
Query: 178 LSIEGEKNNIHCNV 191
           L  E   N ++ ++
Sbjct: 174 LRSEFLVNKVNVSI 187

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTG   G+GR  +  LA  G  + V DL  Q +      +AA+T+   I +   KA
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEE------QAAETIKL-IEAADQKA 55
Query: 70  VPNYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           V     V D    D  +  A E  G  D+++NNAGI + K    +++ D + +  V++  
Sbjct: 56  VFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFS 115
Query: 127 AFRVSRAA 134
            F   +AA
Sbjct: 116 VFFGIQAA 123

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+  ++TG+  G+G + A L A  GA V    L G+     K+    D  +A +R+ GG 
Sbjct: 7   GKRVLITGSSQGIGLATARLFARAGAKV---GLHGR-----KAPANIDETIASMRADGGD 58
Query: 69  AVPNYNSVVDGD---KIVQTALENFGRIDIVINNAG-ILRDKSFARISDTDWQLVQDVHL 124
           A      +   +   ++V   +  FG ID++INNAG ++  K    I DT +  V D ++
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANI 118
Query: 125 TGAFRVSRAAWPHM 138
                 ++ A PH+
Sbjct: 119 RSVVMTTKFALPHL 132

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           + +VTGA AG G        ++G  V+      +R  + K     +  +A++  +   A+
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61
Query: 71  PNYNSVVDGDKIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHLTGAFR 129
                    ++++ +    +  IDI++NNAG+ L  +   + S  DW+ + D +  G   
Sbjct: 62  ---------EEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVY 112
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK 168
           ++RA  P M ++N+G ++   S +G     G   Y A K
Sbjct: 113 MTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATK 151

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           Q   D  V +VTG   G+G +   L A +G  V VN    +        +AAD VVA I 
Sbjct: 21  QSXSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR--------EAADAVVAAIT 72
Query: 64  SKGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             GG+AV    +  +  D           FGR+D ++NNAGI+      R+ +   + ++
Sbjct: 73  ESGGEAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQ--RVDEXSVERIE 130
Query: 121 ---DVHLTGAFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGNFGQ-ANYSAAKMAL-- 171
               V++TG+   +  A     +   G+   +V  +S + +LG+  Q  +Y+A+K A+  
Sbjct: 131 RXLRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDT 190
Query: 172 --VGLSNTLSIEGEKNNIHCNVIVP 194
             +GL+  ++ EG    I  N + P
Sbjct: 191 FTIGLAREVAAEG----IRVNAVRP 211

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V I+TG  +G G+  A   A+ GA VV+          G++ +  +    EI    G+ 
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVIT---------GRTKEKLEEAKLEIEQFPGQI 57
Query: 70  VPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           +     V + D   K ++   E FGRIDI+INNA          +S   W  V ++ L G
Sbjct: 58  LTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNG 117
Query: 127 AFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE-GEK 184
            F  S+A   + ++K   G ++   +        G  + +AAK  ++  + TL++E G K
Sbjct: 118 TFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRK 177
Query: 185 NNIHCNVIVPTAASR 199
             I  N I P    R
Sbjct: 178 YGIRVNAIAPGPIER 192

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            + +VA++TGA  G+G + A  LA  G ++ +    G R  D +  K A  ++ E   +G
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALAL----GARSVD-RLEKIAHELMQE---QG 73
Query: 67  GKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            +   ++  V   + + + +   LE FG +D+V+ NAG+   K    +S+ ++  + +V+
Sbjct: 74  VEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVN 133
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           L G +R  +A    +K+     LV T+  S  L  +G   Y + K A   L  T  IE
Sbjct: 134 LLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-GGYVSTKWAARALVRTFQIE 190

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 16/193 (8%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+VTG  +G+G     LL   GA V  +D+         +  A   + AE+  +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---------NEAAGQQLAAELGER 53
Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVH 123
                 + +S  D   ++       G +++++NNAGIL   D    R+ D    L   ++
Sbjct: 54  SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLL--KIN 111
Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
               F   +     MK+   G ++  AS S  L     A YSA+K A+  L+   ++   
Sbjct: 112 TESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR 170
Query: 184 KNN--IHCNVIVP 194
           K    I  N I P
Sbjct: 171 KQGYAIRVNSIHP 183

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA++TGA  G+G + A  LA  G ++ +    G R  D +  K A  ++ E   +G + 
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALAL----GARSVD-RLEKIAHELMQE---QGVEV 54
Query: 70  VPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             ++  V   + + + +   LE FG +D+V+ NAG+   K    +S+ ++  + +V+L G
Sbjct: 55  FYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLG 114
Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
            +R  +A    +K+     LV T+  S  L  +G   Y + K A   L  T  IE
Sbjct: 115 VWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-GGYVSTKWAARALVRTFQIE 168

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           ++ ++TGA +G GR  A  LA  G  V  +     RD  G+++   + +    R      
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVYAS----XRDIVGRNASNVEAIAGFARDNDVDL 61
Query: 70  VP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                +  S V  D+ +   +   GRID++I+NAG          +   +  + D+++  
Sbjct: 62  RTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLS 121
Query: 127 AFRVSRAAWPHMKKQNYGRLV 147
             RV+RAA PH ++Q +G L+
Sbjct: 122 TQRVNRAALPHXRRQKHGLLI 142

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 23  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 71
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 72  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 121
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 122 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 180
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 181 KFALDGFFSSIRKE 194

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 12  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 60
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 61  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 110
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 111 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 169
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 170 KFALDGFFSSIRKE 183

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 19  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 67
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 68  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 117
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 118 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 176
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 177 KFALDGFFSSIRKE 190

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 26  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 74
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 75  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 124
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 125 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 183
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 184 KFALDGFFSSIRKE 197

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 9   PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 57
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 58  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 107
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 108 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 166
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 167 KFALDGFFSSIRKE 180

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 4   PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 52
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 53  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 102
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 103 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 161
Query: 168 KMALVGLSNTLSIEGEKNNIHCNV 191
           K AL G  +++  E   + ++ ++
Sbjct: 162 KFALDGFFSSIRKEYSVSRVNVSI 185

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 10  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 58
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 59  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 108
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 109 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 167
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 168 KFALDGFFSSIRKE 181

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  L++ GA VV+           +S +    VV+ 
Sbjct: 13  PEMLQ--GKKVIVTGASKGIGREMAYHLSKMGAHVVLT---------ARSEEGLQKVVSR 61
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ +  A +  G +D++I N   +   S +   D    
Sbjct: 62  CLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH--ITQTSLSLFHDDIHS 119
Query: 118 L--VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           +  V +V+      +S AA P +K+ N G + + +S +G +     A YSA+K AL G  
Sbjct: 120 VRRVMEVNFLSYVVMSTAALPMLKQSN-GSIAVISSLAGKMTQPMIAPYSASKFALDGFF 178
Query: 176 NTLSIE 181
           +T+  E
Sbjct: 179 STIRTE 184

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 29  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 77
Query: 62  IRSKGGKAVPNY-----NSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDW 116
               G  A  +Y       +   ++ V  A +  G +D++I N           I++T  
Sbjct: 78  CLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSL 126
Query: 117 QLVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA 166
            L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA
Sbjct: 127 NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSA 185
Query: 167 AKMALVGLSNTLSIEGEKNNIHCNV 191
           +K AL G  +++  E   + ++ ++
Sbjct: 186 SKFALDGFFSSIRKEYSVSRVNVSI 210

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 54  AADTVVAEIRSKGGKA----VPNYNSVVDGDKIVQTALE----NFGRIDIVINNAGILRD 105
           AAD V  E+  K GK        Y   V    IV   ++    + G I  +I NAG+   
Sbjct: 48  AADAV--EVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV 105
Query: 106 KSFARISDTDWQLVQDVHLTGAFRVSRAA---WPHMKKQNYGRLVMTAS-------NSGL 155
           K    ++  D+  V DV++ G F   RA    W  ++KQ  G +V+T+S        S L
Sbjct: 106 KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLW--LQKQQKGSIVVTSSMSSQIINQSSL 163
Query: 156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
            G+  Q  Y+++K A   L   L+ E     I  N + P
Sbjct: 164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSP 202

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  GRV +VTGA  G+G + A   A  GASVV+          G++  +   V  +
Sbjct: 9   PELLK--GRVILVTGAARGIGAAAARAYAAHGASVVL---------LGRTEASLAEVSDQ 57
Query: 62  IRSKGGK-----AVPNYNSVVDGDKIVQTALEN-FGRIDIVINNAGILRDKS-FARISDT 114
           I+S G       A+   N+     + +   +E+ FGR+D +++NA I+  ++   ++ D 
Sbjct: 58  IKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDE 117
Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
           D+  V  V++   F ++RA  P +K+     +  T+S+ G  G      Y  +K A  GL
Sbjct: 118 DFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGL 177
Query: 175 SNTLSIEGEK-NNIHCNVIVPTA 196
             TL+ E E    +  N I P A
Sbjct: 178 XQTLADELEGVTAVRANSINPGA 200

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 23  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 71
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 72  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 121
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 122 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSAS 180
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 181 KFALDGFFSSIRKE 194

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 29  PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 77
Query: 62  IRSKGGKAVPNY-----NSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDW 116
               G  A  +Y       +   ++ V  A +  G +D++I N           I++T  
Sbjct: 78  CLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSL 126
Query: 117 QLVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA 166
            L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA
Sbjct: 127 NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSA 185
Query: 167 AKMALVGLSNTLSIEGEKNNIHCNV 191
           +K AL G  +++  E   + ++ ++
Sbjct: 186 SKFALDGFFSSIRKEYSVSRVNVSI 210

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+VA+VTGA  G+GR+ A  LA  GA V ++         G   + A+  V EI+S GG 
Sbjct: 7   GKVALVTGASRGIGRAIAKRLANDGALVAIH--------YGNRKEEAEETVYEIQSNGGS 58
Query: 69  AVP---NYNSVVDGDKIVQTALEN-------FGRIDIVINNAGILRDKSFARISDTDWQL 118
           A     N  S + G + + ++L+N         + DI+INNAGI         ++  +  
Sbjct: 59  AFSIGANLES-LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR 117
Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
              V+    F + + A   ++  +    + +A+    L +F    YS  K A+   + TL
Sbjct: 118 XVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF--IAYSXTKGAINTXTFTL 175
Query: 179 SIEGEKNNIHCNVIVP 194
           + +     I  N I+P
Sbjct: 176 AKQLGARGITVNAILP 191

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           VA+VTG  +G+G +   LL E GA+V           DG+  +AA++ + + R  G +  
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFC------ARDGERLRAAESALRQ-RFPGARLF 62
Query: 71  PNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
            +   V+D  ++    +      G   I++NNAG  R  +FA  +D  W     +     
Sbjct: 63  ASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSV 122
Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN---TLSIEGEK 184
               RA  P ++ +    +V   S   LL +  + +  A   A  G+ N   +++ E   
Sbjct: 123 IHPVRAFLPQLESRADAAIVCVNS---LLASQPEPHMVATSAARAGVKNLVRSMAFEFAP 179
Query: 185 NNIHCNVIV 193
             +  N I+
Sbjct: 180 KGVRVNGIL 188

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+ 
Sbjct: 9   PEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVT---------ARSKETLQKVVSH 57
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ V  A +  G +D++I N           I++T   
Sbjct: 58  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN----------HITNTSLN 107
Query: 118 LVQD----------VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA 167
           L  D          V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+
Sbjct: 108 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSAS 166
Query: 168 KMALVGLSNTLSIE 181
           K AL G  +++  E
Sbjct: 167 KFALDGFFSSIRKE 180

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           PE ++  G+  IVTGA  G+GR  A  L++ GA VV+           +S +    VV+ 
Sbjct: 4   PEMLQ--GKKVIVTGASKGIGREMAYHLSKMGAHVVLT---------ARSEEGLQKVVSR 52
Query: 62  IRSKGGKAVPNYNSVVD----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
               G  +       ++     ++ +  A +  G +D++I N   +   S +   D    
Sbjct: 53  CLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH--ITQTSLSLFHDDIHS 110
Query: 118 L--VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           +  V +V+      +S AA P +K+ N G + + +S +G +     A YSA+K AL G  
Sbjct: 111 VRRVMEVNFLSYVVMSTAALPMLKQSN-GSIAVISSLAGKVTYPMVAPYSASKFALDGFF 169
Query: 176 NTLSIE 181
           +T+  E
Sbjct: 170 STIRTE 175

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           ++ F G  A+VTGAG G+GR     L   GA VV             +   +D V     
Sbjct: 2   KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVV-----------AVTRTNSDLVSLAKE 50
Query: 64  SKGGKAVPNYNSVVD-GD-KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
             G + V      VD GD    + AL   G +D+++NNA ++  + F  ++   +     
Sbjct: 51  CPGIEPV-----CVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFS 105
Query: 122 VHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           V+L   F+VS+     M  +   G +V  +S    +       YS+ K A+  L+  +++
Sbjct: 106 VNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAM 165
Query: 181 EGEKNNIHCNVIVPT 195
           E   + I  N + PT
Sbjct: 166 ELGPHKIRVNSVNPT 180

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 5   VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS 64
           +   G+   +TGA  G+G + AL  A  GA+V +           KS+ A   +   I S
Sbjct: 2   LTLSGKTLFITGASRGIGLAIALRAARDGANVAIA---------AKSAVANPKLPGTIHS 52
Query: 65  -------KGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDT 114
                   GG+ +     + + D++   V   ++ FG IDI++NNA  +  +        
Sbjct: 53  AAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXK 112
Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN--YSAAKMALV 172
            + L Q V+  G+F  ++A  PH+ +     ++  A    L   +  A+  Y+ AK    
Sbjct: 113 RFDLXQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXS 172
Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
            ++  L+ E     +  N + P
Sbjct: 173 LVTLGLAAEFGPQGVAINALWP 194

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 33  GASVVVNDLGGQRDGDG-----KSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL 87
           GA VV+ D    +D  G     +    A  ++ ++  +            D   +V   +
Sbjct: 33  GARVVICD----KDESGGRALEQELPGAVFILCDVTQED-----------DVKTLVSETI 77
Query: 88  ENFGRIDIVINNAGILRDKSFARISDTDWQ---LVQDVHLTGAFRVSRAAWPHMKKQNYG 144
             FGR+D V+NNAG        R  +T  Q    + +++L G + +++ A P+++K   G
Sbjct: 78  RRFGRLDCVVNNAG--HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-G 134
Query: 145 RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
            ++  +S  G +G      Y A K A+  ++  L+++     +  N I P
Sbjct: 135 NVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 184

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           ++A+VTGA  G+G     ++ +     +V  LG  R+ +  ++ A    V  I S   K 
Sbjct: 6   KIAVVTGATGGMGIE---IVKDLSRDHIVYALG--RNPEHLAALAEIEGVEPIESDIVKE 60
Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
           V     V   DK     L+N   +D +++ A + RD +    S  +W    D+++     
Sbjct: 61  VLEEGGV---DK-----LKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAE 112
Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHC 189
           +SR   P ++  + G ++   S +G   + G   Y+A+K AL GL++    E   N I  
Sbjct: 113 LSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRV 171
Query: 190 NVIVP 194
           + + P
Sbjct: 172 STVSP 176

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 16/190 (8%)
Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKA 69
           +AI+TGA  G+G   A  LA  G  VV+           +S +  + V  EI RS     
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLI---------ARSKQNLEKVHDEIXRSNKHVQ 59
Query: 70  VP-----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            P     +       D  ++   + +G +DI++N A    D S +   D +++ + ++++
Sbjct: 60  EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVD-NFRKIXEINV 118
Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
              + + +      K Q  G +   AS +   G      Y + K AL+GL+ +L  E   
Sbjct: 119 IAQYGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178
Query: 185 NNIHCNVIVP 194
             I    + P
Sbjct: 179 LGIRVTTLCP 188

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 21/196 (10%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           ++   GR  +VTGAG G+GR     L   GA VV            ++    D++V E  
Sbjct: 2   ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVV---------AVSRTQADLDSLVRE-- 50
Query: 64  SKGGKAVPNYNSV-VD-GD-KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
                  P    V VD GD +  + AL + G +D+++NNA +   + F  ++   +    
Sbjct: 51  ------CPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSF 104
Query: 121 DVHLTGAFRVSR-AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           +V+L    +VS+  A   + +   G +V  +S          + Y + K AL  L+  ++
Sbjct: 105 EVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMA 164
Query: 180 IEGEKNNIHCNVIVPT 195
           +E   + I  N + PT
Sbjct: 165 LELGPHKIRVNAVNPT 180

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 21/196 (10%)
Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           ++   GR  +VTGAG G+GR     L   GA VV            ++    D++V E  
Sbjct: 2   ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVV---------AVSRTQADLDSLVRE-- 50
Query: 64  SKGGKAVPNYNSV-VD-GD-KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
                  P    V VD GD +  + AL + G +D+++NNA +   + F  ++   +    
Sbjct: 51  ------CPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSF 104
Query: 121 DVHLTGAFRVSR-AAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           +V+L    +VS+  A   + +   G +V  +S          + Y + K AL  L+  ++
Sbjct: 105 EVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMA 164
Query: 180 IEGEKNNIHCNVIVPT 195
           +E   + I  N + PT
Sbjct: 165 LELGPHKIRVNAVNPT 180

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 13/189 (6%)
Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           GR A+VTG+  G+G + A  LA  GA V+++       G    S AA  V   I + GG 
Sbjct: 33  GRTALVTGSSRGIGAAIAEGLAGAGAHVILH-------GVKPGSTAA--VQQRIIASGGT 83
Query: 69  A---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A     + +    G  +++ A E    +DI++ NA    + + + ++  D      V+L 
Sbjct: 84  AQELAGDLSEAGAGTDLIERA-EAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLG 142
Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
               + ++A P M  + +GR+V   S + L        Y+A K A   L  + + +   +
Sbjct: 143 STVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGD 202
Query: 186 NIHCNVIVP 194
           N+  N + P
Sbjct: 203 NVLLNTLAP 211

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +   RV IVTGA +GLG +    LA+ GA+V+  DL            A +   AE+   
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDL---------KPPAGEEPAAEL--- 51
Query: 66  GGKAVPNYNSVVDGDKIVQTAL----ENFGRIDIVINNAGI-----LRDKSFARISDTDW 116
            G AV   N+ V  +     AL    + FG +  ++N AG      +  +S     D+  
Sbjct: 52  -GAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFA 110
Query: 117 QLVQDVHLTGAFRVSRAAWPHMKK------QNYGRLVMTASNSGLLGNFGQANYSAAKMA 170
           + V  V+L G F   R A     +         G +V TAS +   G  GQA Y+A+K  
Sbjct: 111 RTVA-VNLIGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGG 169
Query: 171 LVGLSNTLSIEGEKNNIHCNVIVP 194
           +  L+   + E  +  I    I P
Sbjct: 170 VAALTLPAARELARFGIRVVTIAP 193

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	223
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-125
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-123
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-120
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-102
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-114
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-68
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	9e-66
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-65
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-64
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-64
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	8e-64
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-63
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-63
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	8e-63
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-62
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-62
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	4e-62
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-62
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-61
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-61
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-61
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-61
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	7e-61
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-61
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-60
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-60
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-60
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-60
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-60
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-60
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-60
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-60
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-60
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-60
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	5e-60
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-60
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	7e-60
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	9e-60
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-59
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-59
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-59
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-59
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-59
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-59
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-59
3rih_A	293	Short chain dehydrogenase or reductase; structural	5e-59
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-59
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	9e-59
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-58
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-58
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-58
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-58
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	6e-58
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	8e-58
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	9e-58
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-57
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-57
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-57
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-57
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-57
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-57
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-57
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-57
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-57
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	5e-57
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	7e-57
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	8e-57
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-56
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-56
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-56
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-56
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-56
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	3e-56
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-56
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-56
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-56
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-56
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-56
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	5e-56
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-56
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-55
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-55
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-55
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-55
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-55
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-55
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-55
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-55
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-55
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-55
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-55
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-55
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-55
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	9e-55
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-54
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-54
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-54
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-54
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-54
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-54
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-54
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-54
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-53
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-53
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-53
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-53
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-53
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-53
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-53
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-53
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	6e-53
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-53
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-52
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-52
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-52
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-52
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-52
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-52
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-52
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	6e-52
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	6e-52
1spx_A	278	Short-chain reductase family member (5L265); paral	9e-52
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-51
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-51
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-51
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-51
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-51
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	5e-51
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-51
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-50
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-50
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-50
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-50
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	4e-50
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-50
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	8e-50
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	3e-49
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-49
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-49
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-49
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	7e-49
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-48
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-47
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-47
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	7e-47
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-46
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-46
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	5e-46
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	6e-46
4e4y_A	244	Short chain dehydrogenase family protein; structur	7e-46
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-45
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-45
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	6e-44
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-43
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	5e-42
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-41
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	5e-41
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-40
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-40
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	8e-40
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-38
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-36
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-36
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-35
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-35
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	5e-35
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-35
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-34
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-33
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-33
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-32
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-31
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-31
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-30
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	6e-30
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	8e-28
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-27
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	4e-27
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-26
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-26
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-24
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	7e-19
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-18
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-16
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-16
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-12
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-11
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	5e-09
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	4e-07
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	8e-07
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	1e-06
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	5e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  356 bits (915), Expect = e-125
 Identities = 143/208 (68%), Positives = 170/208 (81%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +RFDGRV +VTGAG GLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV 
Sbjct: 1   MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE 60

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EIR +GGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++Q
Sbjct: 61  EIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQ 120

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            VHL G+F+V+RAAW HMKKQNYGR++MTAS SG+ GNFGQANYSAAK+ L+GL+NTL I
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180

Query: 181 EGEKNNIHCNVIVPTAASRLTEDILPPG 208
           EG KNNIHCN I P A SR+TE ++P  
Sbjct: 181 EGRKNNIHCNTIAPNAGSRMTETVMPED 208

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  361 bits (928), Expect = e-123
 Identities = 138/217 (63%), Positives = 176/217 (81%), Gaps = 2/217 (0%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
              ++R+DGRVA+VTGAGAGLGR YALL AERGA VVVNDLGG   GDG S +AAD VV 
Sbjct: 11  SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVD 70

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           EIR  GG+AV +YNSV+DG K+++TA++ FGR+DI++NNAGILRD+S  + S+ DW LV 
Sbjct: 71  EIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVN 130

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           DVHL G+F+ ++AA+P+MKKQNYGR++MT+SNSG+ GNFGQ NY+AAKM L+GL+NT++I
Sbjct: 131 DVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAI 190

Query: 181 EGEKNNIHCNVIVPTAASRLTEDILPPGSYPVKGFDP 217
           EG +NN+ CNVIVPTAASR+TE ILP   +      P
Sbjct: 191 EGARNNVLCNVIVPTAASRMTEGILPDILF--NELKP 225

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  353 bits (907), Expect = e-120
 Identities = 119/204 (58%), Positives = 155/204 (75%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
            V F  +V I+TGAG GLG+ Y+L  A+ GA VVVNDLGG  +G G +SKAAD VV EI 
Sbjct: 3   PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV 62

Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             GG AV +YN+V+DGDKIV+TA++NFG + ++INNAGILRD S  ++++ D++LV DVH
Sbjct: 63  KNGGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVH 122

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L GAF V++AAWP+ +KQ YGR+V T+S +GL GNFGQANY++AK AL+G + TL+ EG 
Sbjct: 123 LNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGA 182

Query: 184 KNNIHCNVIVPTAASRLTEDILPP 207
           K NI  N I P A SR+TE I+PP
Sbjct: 183 KYNIKANAIAPLARSRMTESIMPP 206

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  306 bits (786), Expect = e-102
 Identities = 90/211 (42%), Positives = 131/211 (62%), Gaps = 12/211 (5%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
               V    +V ++TGAGAGLG+ YA   A+ GA VVVND              A   V 
Sbjct: 314 GAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD-----------ATKTVD 362

Query: 61  EIRSKGGKAVPNYNSVVD-GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           EI++ GG+A P+ + V    + I++  ++ +G IDI++NNAGILRD+SFA++S  +W  V
Sbjct: 363 EIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSV 422

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           Q VHL G F +SR AWP+  ++ +GR++   S SG+ GNFGQANYS++K  ++GLS T++
Sbjct: 423 QQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMA 482

Query: 180 IEGEKNNIHCNVIVPTAASRLTEDILPPGSY 210
           IEG KNNI  N++ P A + +T  I+     
Sbjct: 483 IEGAKNNIKVNIVAPHAETAMTLSIMREQDK 513

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  328 bits (842), Expect = e-114
 Identities = 88/216 (40%), Positives = 126/216 (58%), Gaps = 10/216 (4%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSS-KAADTVVA 60
                 DGRV IVTGAG G+GR++AL  A  GA VVVND+G   DG   S   AA +VV 
Sbjct: 20  GSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVD 79

Query: 61  EIRSKGGKAVPNYNSVVD---GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           EI + GG+AV + ++V D      ++QTA+E FG +D+++NNAGI+RD+  A  S+ ++ 
Sbjct: 80  EITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFD 139

Query: 118 LVQDVHLTGAFRVSRAAWPHMK------KQNYGRLVMTASNSGLLGNFGQANYSAAKMAL 171
            V  VHL G F   R A  + +      K   GR++ T+S +GL G+ GQ NYSAAK  +
Sbjct: 140 AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGI 199

Query: 172 VGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILPP 207
             L+   + E  +  +  N I P+A +R+TE +   
Sbjct: 200 ATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAE 235

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  209 bits (535), Expect = 1e-68
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   ++A++TG   G+GR+ A   A  GA + + DL             A    A IR+ 
Sbjct: 4   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADL-----------VPAPEAEAAIRNL 52

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           G +       V     V   +   +  +  FGR DI++NNAGI     F  ++   W+  
Sbjct: 53  GRRVLTVKCDVSQPGDV---EAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKT 109

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            ++++   F +++A  P MK+  +GR++   S +  L      +Y + K A +G +  L+
Sbjct: 110 FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALA 169

Query: 180 IEGEKNNIHCNVIVP 194
            +  K+ I  N I P
Sbjct: 170 SDLGKDGITVNAIAP 184

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  202 bits (517), Expect = 9e-66
 Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 20/214 (9%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             + +R DG+ AI+TGAGAG+G+  A+  A  GASVVV+D+         ++ AA+ VV 
Sbjct: 3   NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVD 53

Query: 61  EIRSKGGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT 114
           EI+  GG+A      + +   +     +   A+   G++DI++NNAG    K F  +   
Sbjct: 54  EIQQLGGQAFACRCDITSEQEL---SALADFAISKLGKVDILVNNAGGGGPKPF-DMPMA 109

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
           D++   ++++   F +S+   P M+K   G ++   S +    N    +Y+++K A   L
Sbjct: 110 DFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL 169

Query: 175 SNTLSIEGEKNNIHCNVIVPTA-ASRLTEDILPP 207
              ++ +  + NI  N I P A  +   + ++ P
Sbjct: 170 VRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP 203

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  201 bits (514), Expect = 2e-65
 Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 14/206 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +  VAIVTGA AG+GR+ A   A+ GASVVV DL          S+ A+ V A IR  
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDL---------KSEGAEAVAAAIRQA 59

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GGKA+    N       + +++ AL+ FG+I +++NNAG    K F  +  +D++    +
Sbjct: 60  GGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKL 118

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L   FR+S+ A PHM+K   G ++  +S +G   N   A+Y ++K A+  L+  ++ + 
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDV 178

Query: 183 EKNNIHCNVIVPTA-ASRLTEDILPP 207
               I  N I P A  +     +L P
Sbjct: 179 GPMGIRVNAIAPGAIKTDALATVLTP 204

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  199 bits (509), Expect = 3e-64
 Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 6/196 (3%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGK---SSKAADTVVAEI 62
            F+G+ A++TG   G+GRS+A+ LAE GA + + D     D  G    ++      VA +
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 63  RSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
              G + +     V D       V  A +  G IDI I NAGI        +    W  V
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEV 126

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
              +LTG F    A  P M K+NYGR+V  +S  G   NF QA+Y ++K  ++GL+   +
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186

Query: 180 IEGEKNNIHCNVIVPT 195
            +     I  N + P 
Sbjct: 187 HDLVGYGITVNAVAPG 202

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  199 bits (509), Expect = 3e-64
 Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG----DGKSSKAADTVVAE 61
              GRVA +TGA  G GRS+A+ LA  GA ++  D+             S +  D     
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 62  IRSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           +  +G KA+     V D     ++V   +E FGR+D+V+ NAG+L       ++D  W  
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDT 131

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
           V  V+LTG +R  RA  P M +  N G +V+ +S++GL    G  +YSA+K  L  L+NT
Sbjct: 132 VIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNT 191

Query: 178 LSIEGEKNNIHCNVIVPTA 196
           L+IE  +  I  N I P +
Sbjct: 192 LAIELGEYGIRVNSIHPYS 210

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  199 bits (509), Expect = 8e-64
 Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 7/197 (3%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGK---SSKAADTVVAEI 62
           R  G+VA +TGA  G GR++A+ LA+ GA +V  DL  Q+        S +     V  +
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 63  RSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
             +G + +     V D      +V  AL  FG IDI+++N GI        ++D  W  +
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDI 162

Query: 120 QDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
              +L GA+   RA  P M ++   G ++  +S  GL G  GQ++Y+A+K  + GL  +L
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222

Query: 179 SIEGEKNNIHCNVIVPT 195
           + E  ++NI  N + P 
Sbjct: 223 ANEVGRHNIRVNSVNPG 239

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  197 bits (503), Expect = 1e-63
 Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 13/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +F+G+V +VTGAG  +G + AL LAE G ++ + D+         + +A +   A +R K
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM---------NREALEKAEASVREK 54

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQD 121
           G +A      V   +     V + + +FG+ID + NNAG              D+  V  
Sbjct: 55  GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +++TGAF V +A    M  QNYGR+V TAS +G+ G    A Y  +K A++ L+ T +++
Sbjct: 115 INVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALD 174

Query: 182 GEKNNIHCNVIVP 194
               NI  N I P
Sbjct: 175 LAPYNIRVNAISP 187

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  196 bits (502), Expect = 2e-63
 Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 25/212 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF+ +V IVTG+G G+G++YA  LA  GA+VVV D+         +++AA+ V  +I + 
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI---------NAEAAEAVAKQIVAD 56

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL---RDKSFARISDTDW 116
           GG A      V +  S      +    L  FG ID ++NNA I    +      I    +
Sbjct: 57  GGTAISVAVDVSDPESA---KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYY 113

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +    V+L GA   +RA +  M K+  G +V  +S +          Y  AK+ + GL+ 
Sbjct: 114 KKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQ 170

Query: 177 TLSIEGEKNNIHCNVIVP-TAASRLTEDILPP 207
            LS E    NI  N I P    +       P 
Sbjct: 171 QLSRELGGRNIRINAIAPGPIDTEANRTTTPK 202

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  195 bits (498), Expect = 8e-63
 Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 11/191 (5%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              + A+VTG+  G+G++ A+ LAE G ++V+N           S KAA     EI   G
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR--------SKKAALETAEEIEKLG 53

Query: 67  GKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            K +    N        ++ Q   E FGR+D+ +NNA     +    + +T W    +++
Sbjct: 54  VKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNIN 113

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
                  ++ A   M+K   G +V  +S   +           +K AL  L+  L++E  
Sbjct: 114 AKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELS 173

Query: 184 KNNIHCNVIVP 194
              I  N +  
Sbjct: 174 PKQIIVNAVSG 184

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  193 bits (494), Expect = 3e-62
 Identities = 63/193 (32%), Positives = 94/193 (48%), Gaps = 13/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               +V IVTGAG+G+GR+ A   A   + VV  +L              + +V E+R  
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVEL---------LEDRLNQIVQELRGM 54

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQD 121
           G + +     V       + V+   E + RID++ NNAGI+      A +SD  W+ V  
Sbjct: 55  GKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLA 114

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+L  AF  SRA  P M KQ  G +V TAS +G+ G F  A Y+ AK  L+GL+ +++  
Sbjct: 115 VNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAH 174

Query: 182 GEKNNIHCNVIVP 194
                I    ++P
Sbjct: 175 YGDQGIRAVAVLP 187

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  195 bits (498), Expect = 3e-62
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG---DGKSSKAADTVVAEI 62
           + +G+VA +TGA  G GRS+A+ LA  GA ++  D+  Q DG      +       V ++
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84

Query: 63  RSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQL 118
            + G + + +   V D D     V   +   GR+DIV+ NA +  +     R+    W+ 
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRD 144

Query: 119 VQDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
           + DV+L GA+  +R A PH+   +  G +V T+S  GL G     NY A+K  L GL  T
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204

Query: 178 LSIEGEKNNIHCNVIVPTA 196
           +++E    NI  N++ P++
Sbjct: 205 MALELGPRNIRVNIVCPSS 223

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  193 bits (494), Expect = 4e-62
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 18/196 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +G+V ++TG+  GLG+S A+  A   A VVVN               A++V+ EI+  
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--------KEDEANSVLEEIKKV 55

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           GG+A      V   + V     +VQ+A++ FG++D++INNAG+    S   +S +DW  V
Sbjct: 56  GGEAIAVKGDVTVESDV---INLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKV 112

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
            D +LTGAF  SR A  +  + +  G ++  +S    +      +Y+A+K  +  ++ TL
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETL 172

Query: 179 SIEGEKNNIHCNVIVP 194
           ++E     I  N I P
Sbjct: 173 ALEYAPKGIRVNNIGP 188

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  193 bits (494), Expect = 4e-62
 Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 8/199 (4%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG----DGKSSKAADTVVAE 61
           + +GRVA +TGA  G GR++A+ +A  GA ++  D+ G+       D  S       V  
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 62  IRSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           + +   + V       D D   K+V   +   GR+DI++ NAG+   +++  I+  D++ 
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRD 127

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
           V D+++TG +    A  P + +    G +++ +S +G+       +Y+A+K A+ GL+  
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187

Query: 178 LSIEGEKNNIHCNVIVPTA 196
            + E  K++I  N + P  
Sbjct: 188 FAAELGKHSIRVNSVHPGP 206

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  193 bits (492), Expect = 1e-61
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 15/195 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
                VA++TGAG+G+GR+ AL LA  G +V              +    + V  EI   
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGR---------TRTEVEEVADEIVGA 75

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQD 121
           GG+A+     V D       V+  +  FG +DIV+ NAGI         +   +W     
Sbjct: 76  GGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIA 135

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL--LGNFGQANYSAAKMALVGLSNTLS 179
           V+L G F       P++K++  G +V+ +S +G       G   Y+A K A V +   L+
Sbjct: 136 VNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLA 195

Query: 180 IEGEKNNIHCNVIVP 194
           +E  K++I  N + P
Sbjct: 196 LELGKHHIRVNAVCP 210

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  191 bits (488), Expect = 2e-61
 Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 16/191 (8%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
            + F G+   VTGAG G+G + AL   E GA V   D    ++    +++  D       
Sbjct: 2   HMDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMD------- 54

Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
                 V +   V    ++ Q  L    R+D ++N AGILR  +  ++S  DWQ    V+
Sbjct: 55  ------VADAAQV---AQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVN 105

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + GAF + +      ++Q  G +V  AS++      G + Y A+K AL  L+ ++ +E  
Sbjct: 106 VGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELA 165

Query: 184 KNNIHCNVIVP 194
            + + CNV+ P
Sbjct: 166 GSGVRCNVVSP 176

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  191 bits (487), Expect = 4e-61
 Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 14/204 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA+VTGA  G+G + A  L   GA VV+              +    V  EI + 
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTAR---------DVEKLRAVEREIVAA 76

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQD 121
           GG+A  +   +   D         L   GR D+++NNAG+         +   +W  +  
Sbjct: 77  GGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+L   + + RA  P M     G ++  +S +G       A Y+A+K  L GL  + + E
Sbjct: 137 VNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEE 196

Query: 182 GEKNNIHCNVIVPTA-ASRLTEDI 204
             ++ +  +++ P +  +     +
Sbjct: 197 LRQHQVRVSLVAPGSVRTEFGVGL 220

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  190 bits (485), Expect = 5e-61
 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            +A+VT A    G +    L + G +VV +D           + AA+    E  + G  A
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDAS--------FADAAERQRFESENPGTIA 53

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARI---SDTDWQLVQDVHLTG 126
           +    +    +++V   L++   ID +++N  I R  +   +   S+ D + + +     
Sbjct: 54  L----AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIF 109

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
              + ++A   ++      ++   S+ G         Y  A+ A V L  + +    ++ 
Sbjct: 110 PILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDG 169

Query: 187 IHCNVIVP 194
           I    I P
Sbjct: 170 ILLYAIGP 177

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  191 bits (487), Expect = 7e-61
 Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               + A++TG+ +G+G + A  LA+ GA++V+N  G        +     TV  E+   
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFG--------APDEIRTVTDEVAGL 73

Query: 66  -GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
             G  + +   +    +I   +    + FG  DI++NNAG+   +         W  +  
Sbjct: 74  SSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+L+ +F   R A P MKK+ +GR++  AS  GL+ +  ++ Y AAK  ++GL+ T+++E
Sbjct: 134 VNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALE 193

Query: 182 GEKNNIHCNVIVP 194
             ++ +  N I P
Sbjct: 194 VAESGVTVNSICP 206

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  190 bits (485), Expect = 7e-61
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 12/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              GR  +VTG   G+GR  A + A  GA+V V            ++     V    +  
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS--------TADIDACVADLDQLG 58

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
            GK +     V D      +   A+E FG ID+V  NAG+  D   A ++      +  V
Sbjct: 59  SGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAV 118

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++ G F   +A    +     GR+V+T+S +G + G  G ++Y A K A +G   T +IE
Sbjct: 119 NVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIE 178

Query: 182 GEKNNIHCNVIVP 194
              + I  N I+P
Sbjct: 179 LAPHKITVNAIMP 191

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  190 bits (484), Expect = 1e-60
 Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 21/199 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               R A++T    GLG+     L  +G SV V             + A +T+    +  
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS--------DTTAMETMKETYKDV 55

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAG--ILRDKSFARISDTDWQ 117
             +       V     +    KIV+ A+ +FG+ID +INNAG  +   K      + +W 
Sbjct: 56  EERLQFVQADVTKKEDL---HKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWN 112

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS--GLLGNFGQANYSAAKMALVGLS 175
            +   +LT  F + +   P M+KQN+GR++           G   ++ ++AAK+ LV L+
Sbjct: 113 EMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLT 172

Query: 176 NTLSIEGEKNNIHCNVIVP 194
            T++ E  +  I  N++ P
Sbjct: 173 KTVAYEEAEYGITANMVCP 191

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  189 bits (483), Expect = 1e-60
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 15/195 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R D RVAIVTG    +G +    LAE GA V++ DL             A   V ++R +
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADL---------DEAMATKAVEDLRME 60

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQD 121
           G         V + +     V++  E  GR+DI++  AGI + +     ++D  W    D
Sbjct: 61  GHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALVGLSNTLS 179
           ++L G FR  +A    M +Q  G +V   S SGL+ N    QA Y+A+K  +     +L+
Sbjct: 121 INLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLA 180

Query: 180 IEGEKNNIHCNVIVP 194
            E   + I  N + P
Sbjct: 181 AEWAPHGIRANAVAP 195

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  189 bits (482), Expect = 1e-60
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 22/196 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+ A+VTGA  G+G++ A  LA  GA+V+V+D+         +++ A    A I   
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDI---------NAEGAKAAAASI--- 50

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           G KA      + +  SV     +        G IDI++NNA I+   ++  +    W+ +
Sbjct: 51  GKKARAIAADISDPGSV---KALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKI 107

Query: 120 QDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
            DV+LTG F V+RA    M+     GR++  ASN+   G    A Y AAK  ++G +  L
Sbjct: 108 IDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRAL 167

Query: 179 SIEGEKNNIHCNVIVP 194
           + E  K NI  N + P
Sbjct: 168 ATELGKYNITANAVTP 183

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  189 bits (483), Expect = 2e-60
 Identities = 46/209 (22%), Positives = 88/209 (42%), Gaps = 12/209 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+   +TGA  G+G + AL  A  GA+V +         + K      +  A + + 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSA--VANPKLPGTIHSAAAAVNAA 60

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG+ +     + + D++   V   ++ FG IDI++NNA  +  +         + L+Q V
Sbjct: 61  GGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQV 120

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALVGLSNTLSI 180
           +  G+F  ++A  PH+ +     ++  A    L   +      Y+ AKM +  ++  L+ 
Sbjct: 121 NARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAA 180

Query: 181 EGEKNNIHCNVIVP-----TAASRLTEDI 204
           E     +  N + P     T A  +   +
Sbjct: 181 EFGPQGVAINALWPRTVIATDAINMLPGV 209

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  189 bits (482), Expect = 2e-60
 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 14/193 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               +V +++G G  LG + A   AE+GA +V+            + +  + V  ++   
Sbjct: 8   LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAAR---------TVERLEDVAKQVTDT 58

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQD 121
           G +A+     + D      +V   ++ +GR+D+VINNA  +   K FA  +    +   +
Sbjct: 59  GRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           + + GA R+ +   P + +++ G +V   S            Y  AK AL+ +S TL+ E
Sbjct: 119 LTVFGALRLIQGFTPAL-EESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATE 177

Query: 182 GEKNNIHCNVIVP 194
             +  I  N ++P
Sbjct: 178 LGEKGIRVNSVLP 190

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  188 bits (481), Expect = 3e-60
 Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 13/198 (6%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +  +   + +VA+VT +  G+G + A  LA+ GA VVV+             +  D  VA
Sbjct: 6   VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSR---------KQENVDRTVA 56

Query: 61  EIRSKGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDW 116
            ++ +G        +     D +++V  A+   G +DI+++NA +     +    ++  W
Sbjct: 57  TLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVW 116

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             +  V++     +++A  P M+K+  G +++ +S            Y+ +K AL+GL+ 
Sbjct: 117 DKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTK 176

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L++E    NI  N + P
Sbjct: 177 NLAVELAPRNIRVNCLAP 194

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  188 bits (480), Expect = 3e-60
 Identities = 64/190 (33%), Positives = 101/190 (53%), Gaps = 14/190 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   +  ++TGA  G+GR+   L A+ GA +V  D+                    + + 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI---------EEGPLREAAEAVGAH 52

Query: 66  GGKA-VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
                V +  SV   ++    AL + GR+D V++ AGI RD    ++   DW+LV  V+L
Sbjct: 53  PVVMDVADPASV---ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL 109

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           TG+F V++AA   M+++N G +V+TAS    LGN GQANY+A+   +VGL+ TL++E  +
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGR 168

Query: 185 NNIHCNVIVP 194
             I  N + P
Sbjct: 169 WGIRVNTLAP 178

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  188 bits (480), Expect = 3e-60
 Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 14/191 (7%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+ A+VTG+ +G+G   A +LA  GA++V+N  G                +AEI   G
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG-----------DPAPALAEIARHG 50

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            KAV +   + D  +I      A   FG +DI++NNAGI       +     W  +  ++
Sbjct: 51  VKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALN 110

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L+  F  +R A P M+ +N+GR++  AS  GL+G+ G+A Y AAK  +VGL+  + +E  
Sbjct: 111 LSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETA 170

Query: 184 KNNIHCNVIVP 194
            +N+ CN I P
Sbjct: 171 TSNVTCNAICP 181

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  188 bits (481), Expect = 4e-60
 Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 14/194 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
                VA+VTG  +G+G +   LL E GA+V        RDG+           + +R +
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCA----RDGE-----RLRAAESALRQR 55

Query: 66  --GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             G +   +   V+D  ++    +      G   I++NNAG  R  +FA  +D  W    
Sbjct: 56  FPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEEL 115

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            +         RA  P ++ +    +V   S             SAA+  +  L  +++ 
Sbjct: 116 QLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAF 175

Query: 181 EGEKNNIHCNVIVP 194
           E     +  N I+ 
Sbjct: 176 EFAPKGVRVNGILI 189

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  188 bits (480), Expect = 4e-60
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 21/197 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA++TG+ +G+G + A   A+ GA +V+      R  D             ++ K
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVA----RQVD-----RLHEAARSLKEK 54

Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
            G  V      V  D         +V++   +FG  DI++NNAG   +++    +D  WQ
Sbjct: 55  FGVRV----LEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQ 110

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
              ++ +  A R++R   P M+ +  G ++  AS   +   + +  Y+  K AL+  S T
Sbjct: 111 FYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKT 170

Query: 178 LSIEGEKNNIHCNVIVP 194
           L+ E  K+NI  N I P
Sbjct: 171 LATEVIKDNIRVNCINP 187

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  188 bits (481), Expect = 5e-60
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 14/192 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             + A VTG  +G+G + A  LA RG +V               +K     V  +R+ G 
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCAR---------DAKNVSAAVDGLRAAGH 73

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
               +   V   D++   V  A+E FG I I++N+AG       A + D  W  V D +L
Sbjct: 74  DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNL 133

Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV+R       M++  +GR+V  AS  G  G    A Y+A+K  +VG + ++  E 
Sbjct: 134 TGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFEL 193

Query: 183 EKNNIHCNVIVP 194
            K  I  N + P
Sbjct: 194 AKTGITVNAVCP 205

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  188 bits (480), Expect = 6e-60
 Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 22/217 (10%)

Query: 1   MPEQVRFDGRVAIVTGA-GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVV 59
           +       G+V +VT A G G+G + A      GA VV++D            +      
Sbjct: 14  IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDY---------HERRLGETR 64

Query: 60  AEIRSKG-GKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARIS 112
            ++   G G+       V +  +V   D ++   +E  GR+D+++NNAG+        ++
Sbjct: 65  DQLADLGLGRVEAVVCDVTSTEAV---DALITQTVEKAGRLDVLVNNAGLGGQTPVVDMT 121

Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMAL 171
           D +W  V +V LT   R +RAA  + +  ++ G +V  AS  G      Q++Y+AAK  +
Sbjct: 122 DEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181

Query: 172 VGLSNTLSIEGEKNNIHCNVIVP-TAASRLTEDILPP 207
           + L+   +IE  +  +  N + P  A  +  E     
Sbjct: 182 MALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS 218

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  188 bits (479), Expect = 7e-60
 Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 10/189 (5%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+ A+VTG+ AG+G++ A  L   GA+V++N         G+  +  +  + EIR++ 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLIN---------GRREENVNETIKEIRAQY 58

Query: 67  GKAVPNYNSV-VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
             A+       +  ++  Q  +E + ++DI+INN GI     +  I D DW  + +V++ 
Sbjct: 59  PDAILQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIM 118

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
              R++R+    M ++  GR++  AS + ++ +   A+YSA K   + LS +L+      
Sbjct: 119 SGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGT 178

Query: 186 NIHCNVIVP 194
           N+  N I+P
Sbjct: 179 NVTVNTIMP 187

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  187 bits (477), Expect = 9e-60
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 12/192 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK- 65
             G+VA+VTG+ +G+G   A  LA +GA +V+N  G         +   + V A + ++ 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--------DAAEIEKVRAGLAAQH 53

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G K + +   +  G+ +   V  A+   GRIDI++NNAGI             W  +  +
Sbjct: 54  GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILAL 113

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L+  F  + AA PHMKKQ +GR++  AS  GL+ +  ++ Y AAK  +VG +   ++E 
Sbjct: 114 NLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173

Query: 183 EKNNIHCNVIVP 194
               I  N I P
Sbjct: 174 AGQGITANAICP 185

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  186 bits (476), Expect = 1e-59
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 17/201 (8%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
                  GRV +VTGA  G+G + A   A  GASVV+           ++  +   V  +
Sbjct: 7   AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLG---------RTEASLAEVSDQ 57

Query: 62  IRSKGGKAVPNYNSVVDG------DKIVQTALENFGRIDIVINNAGILRDKS-FARISDT 114
           I+S G          ++        ++       FGR+D +++NA I+  ++   ++ D 
Sbjct: 58  IKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDE 117

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
           D+  V  V++   F ++RA  P +K+     +  T+S+ G  G      Y  +K A  GL
Sbjct: 118 DFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGL 177

Query: 175 SNTLSIE-GEKNNIHCNVIVP 194
             TL+ E      +  N I P
Sbjct: 178 MQTLADELEGVTAVRANSINP 198

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  187 bits (478), Expect = 1e-59
 Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 14/194 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             D  VA+VTGA +G+G   A  L + G  V V              +   T + E+R  
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCAR---------GEEGLRTTLKELREA 69

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +A      V    +I   V   +E +G +D+++NNAG     + A ++D  W  V + 
Sbjct: 70  GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVET 129

Query: 123 HLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           +LTG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +
Sbjct: 130 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGL 189

Query: 181 EGEKNNIHCNVIVP 194
           E  +  I  N + P
Sbjct: 190 ELARTGITVNAVCP 203

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  186 bits (475), Expect = 2e-59
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 14/190 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G+  +VTG   G+GR+ A   A  GA V + DL                V   I   
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL----------RPEGKEVAEAIGGA 52

Query: 66  GGKA-VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
             +  + +        + V+ A    GR+D+++NNA I    S   +   +W+ V +V+L
Sbjct: 53  FFQVDLEDERER---VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 109

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           T    +S  A   M+K   G +V  AS  GL      A Y+A+K  LV L+ +L+++   
Sbjct: 110 TAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAP 169

Query: 185 NNIHCNVIVP 194
             I  N + P
Sbjct: 170 LRIRVNAVAP 179

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  186 bits (476), Expect = 2e-59
 Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 10/195 (5%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M       GR AIVTG   G+G + A  L + GA+V + DL            AA  VVA
Sbjct: 4   MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADL---------DVMAAQAVVA 54

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            + + G     +       D  +Q A++  G  D++  NAG+   +    I+D +W    
Sbjct: 55  GLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNF 114

Query: 121 DVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           DV+  G F  ++ A  H       G +V TAS +  +G    A+YSA+K A+ G +  L+
Sbjct: 115 DVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALA 174

Query: 180 IEGEKNNIHCNVIVP 194
            E    NI  N + P
Sbjct: 175 REMAPKNIRVNCVCP 189

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  186 bits (475), Expect = 2e-59
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 18/192 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+  +VTGA +G+GR+   L A  GAS+V  D                 +   + + 
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE------------ERLLAEAVAAL 50

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             +A+     V D      +   ALE FGR+  V + AG+        +    W+ V  V
Sbjct: 51  EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRV 110

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LTG+F V+R A   +++   G LV+T S +G LG FG A+Y+A K+ +VGL+ TL++E 
Sbjct: 111 NLTGSFLVARKAGEVLEE--GGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALEL 167

Query: 183 EKNNIHCNVIVP 194
            +  +  NV++P
Sbjct: 168 ARKGVRVNVLLP 179

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  186 bits (474), Expect = 3e-59
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 13/189 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGAG G+G++ AL L + G +V + D          +   A  V +EI   GG A
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADY---------NDATAKAVASEINQAGGHA 53

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           V     V D D++   V+ A +  G  D+++NNAG+        I+      V ++++ G
Sbjct: 54  VAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKG 113

Query: 127 AFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
                +AA    KK+ + G+++   S +G +GN   A YS++K A+ GL+ T + +    
Sbjct: 114 VIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPL 173

Query: 186 NIHCNVIVP 194
            I  N   P
Sbjct: 174 GITVNGYCP 182

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  185 bits (472), Expect = 4e-59
 Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 17/195 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+ AIVTG+  GLG++ A  L   GA++V+N           +S + D    E ++ 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP--------ASTSLDATAEEFKAA 53

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           G         V N   V   + +V+TA++ FGRIDI++NNAGI RD    ++S+ DW  V
Sbjct: 54  GINVVVAKGDVKNPEDV---ENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDV 110

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            + +L  A+  ++A    M KQ  G+++   S +G++GN GQANY+A+K  L+G + +++
Sbjct: 111 LNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIA 170

Query: 180 IEGEKNNIHCNVIVP 194
            E     I+CN + P
Sbjct: 171 KEFAAKGIYCNAVAP 185

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  186 bits (475), Expect = 5e-59
 Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 12/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               R  +VTG   G+GR  A + A  GA+V V              + +          
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARS--------PRELSSVTAELGELG 89

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
            G  +     V D        +T ++ FG +D+V  NAGI  +     ++      V DV
Sbjct: 90  AGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++ G     +A    +     GR+++T+S +G + G  G ++Y A+K A +G   T +IE
Sbjct: 150 NVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIE 209

Query: 182 GEKNNIHCNVIVP 194
                +  N I+P
Sbjct: 210 LAPRGVTVNAILP 222

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  185 bits (471), Expect = 7e-59
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 11/190 (5%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +VA+VTG   G+GR  +  LA  G  + V DL  Q +        A   +  I +   K
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEE-------QAAETIKLIEAADQK 54

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           AV     V D       +  A E  G  D+++NNAGI + K    +++ D + +  V++ 
Sbjct: 55  AVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF 114

Query: 126 GAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
             F   +AA     +    G+++  AS + + G    + YS  K A+ GL+   + E   
Sbjct: 115 SVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAP 174

Query: 185 NNIHCNVIVP 194
                N   P
Sbjct: 175 KGHTVNAYAP 184

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  185 bits (472), Expect = 9e-59
 Identities = 81/194 (41%), Positives = 109/194 (56%), Gaps = 17/194 (8%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              R+A+VTGA  G+GR+ AL LA  GA V VN           S+ AAD VVA I + G
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS--------SAGAADEVVAAIAAAG 77

Query: 67  GKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           G+A      V   + V   + +    +E +GR+D+++NNAGI RD    R+   DWQ V 
Sbjct: 78  GEAFAVKADVSQESEV---EALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVL 134

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           D++L G F  SRAA   M KQ  GR++  AS  G +GN GQANYSAAK  ++GL+ T++ 
Sbjct: 135 DLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAK 194

Query: 181 EGEKNNIHCNVIVP 194
           E     I  N + P
Sbjct: 195 ELASRGITVNAVAP 208

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  184 bits (469), Expect = 1e-58
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+Q   + R+ +VTGA  G+GR  A+  A  GA+V++           ++ +    V + 
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLG---------RNEEKLRQVASH 55

Query: 62  IRSKGGKAVPNYNSVVDG------DKIVQTALENFGRIDIVINNAGILRDKS-FARISDT 114
           I  + G+    +   +         ++ Q    N+ R+D V++NAG+L D    +  +  
Sbjct: 56  INEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQ 115

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            WQ V  V++   F +++A  P + K + G LV T+S+ G  G      Y+A+K A  G+
Sbjct: 116 VWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGM 175

Query: 175 SNTLSIEGEKNNIHCNVIVP 194
              L+ E ++  +  N I P
Sbjct: 176 MQVLADEYQQ-RLRVNCINP 194

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  185 bits (471), Expect = 2e-58
 Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 23/215 (10%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
              +   +GR+A+VTG G G+GR  A  L+  G SVV+                 D    
Sbjct: 25  AQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGR---------RPDVLDAAAG 75

Query: 61  EIRSKGGKA-------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDK-SFARIS 112
           EI  + G         V + + V     +       F R+D+++NNAG          ++
Sbjct: 76  EIGGRTGNIVRAVVCDVGDPDQV---AALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVT 132

Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANYSAAKMA 170
              W  +   +LTGAF  ++ A+  MK Q    GR++   S S        A Y+A K A
Sbjct: 133 FEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHA 192

Query: 171 LVGLSNTLSIEGEKNNIHCNVIVP-TAASRLTEDI 204
           + GL+ + +++G  ++I C  I    AA+ +T  +
Sbjct: 193 ITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM 227

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  185 bits (471), Expect = 2e-58
 Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 12/203 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGK-------SSKAADTV 58
           R +G+VA VTGA  G GRS+A+ LA+ GA ++  D+                + +     
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 59  VAEIRSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRD-KSFARISDT 114
              ++    + V     V D D     V + +E  GR+DI++ NAGI     +  + S+ 
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
           DW  + D++L G ++  +A  PHM      G +++T+S  GL       +Y AAK  +VG
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187

Query: 174 LSNTLSIEGEKNNIHCNVIVPTA 196
           L     +E  ++ I  N + PT 
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTH 210

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  183 bits (467), Expect = 3e-58
 Identities = 74/194 (38%), Positives = 111/194 (57%), Gaps = 17/194 (8%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+VA+VTGA  G+GR+ A+ LA++GA+VVVN  G        + + A+ VV EI+  G
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAG--------NEQKANEVVDEIKKLG 53

Query: 67  GKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
             A      V N   V     +V+  ++ FG++DI++NNAG+ +D    R+ + +W  V 
Sbjct: 54  SDAIAVRADVANAEDV---TNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVI 110

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +L G F  ++A    M +Q +GR+V  AS  G+ GN GQANY AAK  ++GL+ T + 
Sbjct: 111 NTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAK 170

Query: 181 EGEKNNIHCNVIVP 194
           E    NI  N I P
Sbjct: 171 ELASRNITVNAIAP 184

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  182 bits (465), Expect = 6e-58
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 11/192 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               R+A VTG   G+G S    L + G  VV             +S      + + ++ 
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGP--------NSPRRVKWLEDQKAL 61

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G     +  +V D D   +         G ID+++NNAGI RD  F +++  DWQ V D 
Sbjct: 62  GFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDT 121

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LT  F V++     M ++ +GR++  +S +G  G FGQ NYS AK  + G + +L+ E 
Sbjct: 122 NLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 181

Query: 183 EKNNIHCNVIVP 194
               +  N + P
Sbjct: 182 ATKGVTVNTVSP 193

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  181 bits (463), Expect = 8e-58
 Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 17/191 (8%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            V +VTGA  G+G++ AL L + G  V+VN           S+KAA+ V  +I + GG+A
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR--------SAKAAEEVSKQIEAYGGQA 53

Query: 70  ------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
                 V     V   + +++TA++ +G ID+V+NNAGI RD    R+  + W  V D++
Sbjct: 54  ITFGGDVSKEADV---EAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLN 110

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           LTG F  ++AA   M K+  GR++  AS  GL+GN GQANY+AAK  ++G S T + EG 
Sbjct: 111 LTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA 170

Query: 184 KNNIHCNVIVP 194
             NI+ NV+ P
Sbjct: 171 SRNINVNVVCP 181

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  183 bits (466), Expect = 9e-58
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 14/221 (6%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
              +    G  A+VTG   G+G +    LA  GA V             ++ K  D  + 
Sbjct: 13  NEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCS---------RNEKELDECLE 63

Query: 61  EIRSKGGKAVPNYNSVVDGD---KIVQTALENF-GRIDIVINNAGILRDKSFARISDTDW 116
             R KG     +   ++      K++QT    F G+++I++NNAG++  K     ++ D+
Sbjct: 64  IWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDY 123

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
            ++   +   A+ +S+ A+P +K    G ++  +S +G       + YSA+K A+  ++ 
Sbjct: 124 NIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTK 183

Query: 177 TLSIEGEKNNIHCNVIVPTA-ASRLTEDILPPGSYPVKGFD 216
           +L+ E  K+NI  N + P    + L E  +    +  +  D
Sbjct: 184 SLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEID 224

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  182 bits (464), Expect = 1e-57
 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 24/202 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+  ++TG+  G+G + A L A  GA V ++           +    D  +A +R+ 
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK--------APANIDETIASMRAD 55

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAG-ILRDKSFARISDTDWQL 118
           GG A      +    +     ++V   +  FG ID++INNAG ++  K    I DT +  
Sbjct: 56  GGDAAFFAADLATSEAC---QQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDA 112

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQ-----NYGRLVMTASNSGLLGNF-GQANYSAAKMALV 172
           V D ++      ++ A PH+            ++ T S +G  G   G   Y AAK  L 
Sbjct: 113 VMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLH 172

Query: 173 GLSNTLSIEGEKNNIHCNVIVP 194
            +         K+ +  N++ P
Sbjct: 173 NVHKNWVDFHTKDGVRFNIVSP 194

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  181 bits (462), Expect = 1e-57
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 17/193 (8%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             + A+VTGA  G+GRS AL LAE G +V VN           S + A+ VV EI++KG 
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNY--------AGSKEKAEAVVEEIKAKGV 54

Query: 68  KA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
            +      V + + V     +++  +  FG +D+++NNAGI RD    R+ + +W  V D
Sbjct: 55  DSFAIQANVADADEV---KAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
            +L G F   + A P M +Q  G ++  +S  G +GN GQANY A K  ++GL+ + + E
Sbjct: 112 TNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARE 171

Query: 182 GEKNNIHCNVIVP 194
                I  N + P
Sbjct: 172 LASRGITVNAVAP 184

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  182 bits (464), Expect = 1e-57
 Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 14/212 (6%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
             ++     +  +VTG   G+G +     A  GA +             ++    +  ++
Sbjct: 6   QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA---------RNEYELNECLS 56

Query: 61  EIRSKGGKAVP---NYNSVVDGDKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDW 116
           + + KG +      + +   + +K++QT    FG ++DI+INN G +R K     +  D+
Sbjct: 57  KWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDF 116

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
                 +L  A+ +S+ A P +K    G ++  +S +G++     + YSA K AL  L+ 
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLAR 176

Query: 177 TLSIEGEKNNIHCNVIVPTA-ASRLTEDILPP 207
            L+ E   + I  N + P   A+ L E +   
Sbjct: 177 NLACEWASDGIRANAVAPAVIATPLAEAVYDD 208

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  181 bits (461), Expect = 2e-57
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 12/192 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
                   V GAG  +G   A   A  G +V        R+G+         +VAEI + 
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGR----RNGE-----KLAPLVAEIEAA 54

Query: 66  GGKAVPNYNSVVDGDKIVQT--ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           GG+ V       + D++     A +    +++ I N G   +      +D  ++ V ++ 
Sbjct: 55  GGRIVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMA 114

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
               F   R +   M     G++  T + + L G  G A +++AK  L  ++ +++ E  
Sbjct: 115 CWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELM 174

Query: 184 KNNIH-CNVIVP 194
             NIH  ++I+ 
Sbjct: 175 PKNIHVAHLIID 186

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  181 bits (462), Expect = 2e-57
 Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 20/196 (10%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              +V I+TG  +G+G+  A   A+ GA VV+            + +  +    EI    
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGR---------TKEKLEEAKLEIEQFP 54

Query: 67  GKAVP------NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           G+ +       N + +    K+++   E FGRIDI+INNA          +S   W  V 
Sbjct: 55  GQILTVQMDVRNTDDI---QKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVI 111

Query: 121 DVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           ++ L G F  S+A   +  ++   G ++   +        G  + +AAK  ++ ++ TL+
Sbjct: 112 NIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLA 171

Query: 180 IE-GEKNNIHCNVIVP 194
           +E G K  I  N I P
Sbjct: 172 VEWGRKYGIRVNAIAP 187

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  182 bits (463), Expect = 3e-57
 Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 9/223 (4%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P  +   G+   ++G   G+G + A  +A  GA+V +       +   K      T   E
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSA--EPHPKLPGTIYTAAKE 59

Query: 62  IRSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           I   GG+A+P    + DGD +   V   +E FG IDI +NNA  +   S   +    + L
Sbjct: 60  IEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDL 119

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNT 177
           +  + + G + VS++  PHMK ++   ++  +    L   +     Y  AK  +   +  
Sbjct: 120 MNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALG 179

Query: 178 LSIEGEKNNIHCNVIVP--TAASRLTEDILPPGSYPVKGFDPP 218
           ++ E     I  N + P  T A+   +++L  G   +     P
Sbjct: 180 IAEELRDAGIASNTLWPRTTVATAAVQNLL-GGDEAMARSRKP 221

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  182 bits (463), Expect = 3e-57
 Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 15/202 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG---DGKSSKAADTVVAEI 62
              G+VA +TGA  G GR++A+ LA  GA ++  DL  Q         + +     V  +
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 63  RSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
              G + V     V D +     +Q  L+  GR+DIV+ NAGI          D  W  V
Sbjct: 70  EDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGWHDV 125

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLG----NFGQANYSAAKMALVGL 174
            DV+LTG +   + A P + KQ   G +V+ +S++GL G    + G   Y AAK  +VGL
Sbjct: 126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGL 185

Query: 175 SNTLSIEGEKNNIHCNVIVPTA 196
               +       I  N I P+ 
Sbjct: 186 MRVYANLLAGQMIRVNSIHPSG 207

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  182 bits (463), Expect = 3e-57
 Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 18/194 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            + +VA+VTGAG G+GR  A +LA+  + V+            ++ K+ D+VV EI+S G
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICI---------SRTQKSCDSVVDEIKSFG 92

Query: 67  GKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            ++      V     +    +++   L     +DI++NNAGI RD  F R+ + +W+ V 
Sbjct: 93  YESSGYAGDVSKKEEI---SEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVL 149

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
             +L   F +++     M    YGR++  +S  GL GN GQANYS++K  ++G + +L+ 
Sbjct: 150 RTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAK 209

Query: 181 EGEKNNIHCNVIVP 194
           E    NI  N I P
Sbjct: 210 ELASRNITVNAIAP 223

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  181 bits (461), Expect = 4e-57
 Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 26/211 (12%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             RVA VTG   GLG + +  L + G +V V+            +    T +   R  G 
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE--------RNDHVSTWLMHERDAGR 75

Query: 68  KA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
                   V ++ S    ++  +  L +FG++D++INNAGI RD +F +++  DW  V  
Sbjct: 76  DFKAYAVDVADFESC---ERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMR 132

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
             L   F V++     M ++ +GR+V   S +G  G FGQANY++AK  + G + TL++E
Sbjct: 133 TDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALE 192

Query: 182 GEKNNIHCNVIVP-------TAASRLTEDIL 205
             K  I  N + P         A  + +D+L
Sbjct: 193 TAKRGITVNTVSPGYLATAMVEA--VPQDVL 221

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  180 bits (460), Expect = 5e-57
 Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 25/203 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F  +  IVTG   G+G ++   +A  GA+V V            ++ A +      +  
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS--------AADAVEVTEKVGKEF 62

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           G K       V N + V    K +Q    + G I  +I NAG+   K    ++  D+  V
Sbjct: 63  GVKTKAYQCDVSNTDIV---TKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFV 119

Query: 120 QDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSG-------LLGNFGQANYSAAKMAL 171
            DV++ G F   RA      +KQ  G +V+T+S S        L G+  Q  Y+++K A 
Sbjct: 120 YDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAAC 179

Query: 172 VGLSNTLSIEGEKNNIHCNVIVP 194
             L   L+ E     I  N + P
Sbjct: 180 SNLVKGLAAEWASAGIRVNALSP 202

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  180 bits (460), Expect = 7e-57
 Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 16/197 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +    VAIVTG   G+G   A  LA  G  + +  +G         ++    V+AE+   
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIG--------DAEGVAPVIAELSGL 77

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDK--SFARISDTDWQLVQ 120
           G + +     + D       V   +  FGRID ++NNAGI       F  +   ++  + 
Sbjct: 78  GARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIV 137

Query: 121 DVHLTGAFRVSRAAWPHMKK---QNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
            V+L G    ++A    M     +    ++   S S ++ +  + +Y  +K  L   S  
Sbjct: 138 GVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQG 197

Query: 178 LSIEGEKNNIHCNVIVP 194
           L++   +  I    + P
Sbjct: 198 LALRLAETGIAVFEVRP 214

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  180 bits (458), Expect = 8e-57
 Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 17/191 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   +V ++TGA  G+G        +R   VV                +AD  +  +   
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS--------IKPSADPDIHTVAGD 76

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               +    +    D+IV+  +E FGRID ++NNAG+   K F  ++  D+     V++ 
Sbjct: 77  ----ISKPETA---DRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVA 129

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN--YSAAKMALVGLSNTLSIEGE 183
           G F +++ A   M KQ  G +V   ++       G  +   S  K  L  ++ +L++E  
Sbjct: 130 GFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFS 189

Query: 184 KNNIHCNVIVP 194
           ++ +  N + P
Sbjct: 190 RSGVRVNAVSP 200

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  179 bits (456), Expect = 1e-56
 Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 12/189 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A++TGA  G+GR+ AL LAE G ++ ++         G++ + A+ V  E R +G   
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHY--------GQNREKAEEVAEEARRRGSPL 53

Query: 70  VPNYNSVV----DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           V    + +        +V  A E  G +D ++NNAGI RD    R+ D DW+ V + +L+
Sbjct: 54  VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLS 113

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             FR +R A   M K  +GR+V   S  G+LGN GQANY A+K  L+G +  ++ E  + 
Sbjct: 114 AVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQR 173

Query: 186 NIHCNVIVP 194
            I  N + P
Sbjct: 174 GITVNAVAP 182

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  180 bits (458), Expect = 1e-56
 Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VAIVTGAGAG+G + A  LA+ G  V+  D+    DGD     AAD    +I   
Sbjct: 26  DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADI----DGD-----AADAAATKI--- 73

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A      V D  +I   V   +  FG +D ++ NAG++   S    +  D+  V  +
Sbjct: 74  GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAI 133

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L GA+  ++ A P M ++  G +V  +S +G +   G   Y  +K  ++ LS   + E 
Sbjct: 134 NLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAEL 193

Query: 183 EKNNIHCNVIVP 194
             + I  N ++P
Sbjct: 194 RSSGIRSNTLLP 205

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  179 bits (457), Expect = 1e-56
 Identities = 56/189 (29%), Positives = 79/189 (41%), Gaps = 17/189 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F+G+VA+VTGA  G+G +    L   GA V V D             A   +  ++R  
Sbjct: 25  GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADR------AVAGIAADLHLPGDLREA 78

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                         D +        GR+DIV+NNAG++        +D DW L   V++ 
Sbjct: 79  A-----------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVE 127

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             FR+ RAA P M     G +V  AS  GL    G A Y   K AL  L+  + ++    
Sbjct: 128 APFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQ 187

Query: 186 NIHCNVIVP 194
            I  N + P
Sbjct: 188 GIRINAVCP 196

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  179 bits (456), Expect = 2e-56
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 16/193 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R +G+ A++TG+  G+GR++A      GA+V + D+           + A    AEI   
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADI---------DIERARQAAAEI--- 52

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A      V   D I   +   +E+ G +DI++NNA +        I+   ++ +  +
Sbjct: 53  GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAI 112

Query: 123 HLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           ++ G     +AA   M  Q   G+++  AS +G  G    A Y A K A++ L+ +  ++
Sbjct: 113 NVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLD 172

Query: 182 GEKNNIHCNVIVP 194
             K+ I+ N I P
Sbjct: 173 LIKHRINVNAIAP 185

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  179 bits (456), Expect = 2e-56
 Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 21/198 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  RV ++TG G+GLGR+ A+ LA  GA + + D+         SS+  +   A +   
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV---------SSEGLEASKAAVLET 60

Query: 66  GGKA--------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDW 116
              A        V +   V   +  V    E FGRID   NNAGI  +       +  ++
Sbjct: 61  APDAEVLTTVADVSDEAQV---EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEF 117

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             V  ++L G F         M++Q  G +V TAS  G+ G   Q+ Y+AAK  +VGL+ 
Sbjct: 118 DKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTR 177

Query: 177 TLSIEGEKNNIHCNVIVP 194
             ++E  +  I  N I P
Sbjct: 178 NSAVEYGRYGIRINAIAP 195

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  179 bits (457), Expect = 3e-56
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 21/208 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDG---KSSKAADTVVAEI 62
           R   +V +VTG   G GRS+A+ LAE GA +++ D+    + +     +S+  +    E+
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 63  RSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
              G KA      V D     + +  A+  FG++D+V+ NAGI      A +    +   
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADA 124

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-----------GQANYSAAK 168
            DV   G      AA P++       ++ T S +GL+              G A YS AK
Sbjct: 125 FDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182

Query: 169 MALVGLSNTLSIEGEKNNIHCNVIVPTA 196
             +   +  L+ +    +I  NVI PT 
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTN 210

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  178 bits (454), Expect = 3e-56
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 14/192 (7%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            RVAIVTGA +G G + A     RG  V   DL  +           +T      +   K
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAE--------TLEETARTHWHAYADK 53

Query: 69  AVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDT---DWQLVQDV 122
            +     V D       +   +E FG ID+++NNAGI  +     +  T    +  V  V
Sbjct: 54  VLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++ G F   RA  PHM  Q  G +V  AS + L+   G++ Y+ +K A++ L+ +++++ 
Sbjct: 114 NVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173

Query: 183 EKNNIHCNVIVP 194
             + I CN + P
Sbjct: 174 AGSGIRCNAVCP 185

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  178 bits (454), Expect = 3e-56
 Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 13/198 (6%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M  +   +G  A+VTG   G+G      LA  GASV             ++ K  +  + 
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCS---------RNQKELNDCLT 51

Query: 61  EIRSKGGKAVPNYNSVVDGD---KIVQTALENF-GRIDIVINNAGILRDKSFARISDTDW 116
           + RSKG K   +   +       +++ T   +F G+++I++NNAGI+  K     +  D+
Sbjct: 52  QWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDY 111

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
            L+  ++   A+ +S  A P +K    G +V  +S SG L    +A Y A K A+  L+ 
Sbjct: 112 SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTR 171

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L+ E  K+NI  N + P
Sbjct: 172 CLAFEWAKDNIRVNGVGP 189

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  178 bits (453), Expect = 3e-56
 Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 13/186 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
             AIVT      G   AL L+E G +V  +D          S K  D + A   +     
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDE---------SFKQKDELEAFAETYPQLK 52

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQDVHLTGAF 128
             +        ++++     +G++D++++N     +     + +  D++   +      F
Sbjct: 53  PMSEQEP---AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPF 109

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
            +  A    MKK+  G ++   S +        + Y++A+     L+N LS E  + NI 
Sbjct: 110 ALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIP 169

Query: 189 CNVIVP 194
              I P
Sbjct: 170 VFAIGP 175

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  178 bits (454), Expect = 4e-56
 Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 18/194 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            D +VAIVTGA  G+GR+ AL LA RGA V+             +   A+ + A  +  G
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGT---------ATTEAGAEGIGAAFKQAG 76

Query: 67  GKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +       V +  +V   D +V++ L+ FG +++++NNAGI +D+   R+ D +W  V 
Sbjct: 77  LEGRGAVLNVNDATAV---DALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVI 133

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           D +L   FR+SRA    M K   GR+V   S  G  GN GQ NY+AAK  + G++  L+ 
Sbjct: 134 DTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAR 193

Query: 181 EGEKNNIHCNVIVP 194
           E     I  N + P
Sbjct: 194 EIGSRGITVNCVAP 207

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  178 bits (454), Expect = 5e-56
 Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 21/198 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+ A++TGA  G+G+  AL  AE GA V V             S A   V  EI   
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAAR---------HSDALQVVADEIAGV 79

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           GGKA      V   + V     ++       G IDI + NAGI+  ++   +   ++Q +
Sbjct: 80  GGKALPIRCDVTQPDQV---RGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRI 136

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSN 176
           QD ++TG F  ++AA   M  Q   G ++ TAS SG + N  Q  ++Y  +K A+V L+ 
Sbjct: 137 QDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTK 196

Query: 177 TLSIEGEKNNIHCNVIVP 194
            +++E   + I  N + P
Sbjct: 197 AMAVELAPHQIRVNSVSP 214

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  177 bits (451), Expect = 7e-56
 Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 9/194 (4%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M + +  +G+VA+VTGA  G+G++ A LLAERGA V+             S   A  +  
Sbjct: 1   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGT---------ATSESGAQAISD 51

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            +   G     N  +    + +++   + FG +DI++NNAGI RD    R+ + +W  + 
Sbjct: 52  YLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIM 111

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +LT  FR+S+A    M K+  GR++   S  G +GN GQANY+AAK  ++G + +++ 
Sbjct: 112 ETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAR 171

Query: 181 EGEKNNIHCNVIVP 194
           E     +  N + P
Sbjct: 172 EVASRGVTVNTVAP 185

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  177 bits (451), Expect = 1e-55
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 21/201 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R    +A+VTGAG+G+GR+ ++ LA  GA+V   DL            AA   V  +   
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDL---------DRAAAQETVRLLGGP 54

Query: 66  GGKAVPNYNSVV----------DGDKIVQTALENFGRI-DIVINNAGILRDKSFARISDT 114
           G K  P   +                +++     F R   +V++ AGI +D+    +S+ 
Sbjct: 55  GSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSED 114

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
           DW  V  V+L G F V++AA   +      G ++  +S  G +GN GQ NY+A+K  ++G
Sbjct: 115 DWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIG 174

Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
           L+ T + E  ++ I CN ++P
Sbjct: 175 LTQTAARELGRHGIRCNSVLP 195

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  177 bits (451), Expect = 2e-55
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             + RV IVTG G+G+GR+ A L A+ GA VVV D+         +  AA  V  EI   
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV---------NEDAAVRVANEI--- 71

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G KA      V        +V+     +GR+D+++NNAG     +   I +  W  +  V
Sbjct: 72  GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSV 131

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++ G F  S+   P M++   G ++ T S +       +  Y A+K A+  L+  ++++ 
Sbjct: 132 NVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDH 191

Query: 183 EKNNIHCNVIVP 194
            K  I  N + P
Sbjct: 192 AKEGIRVNAVAP 203

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  177 bits (451), Expect = 2e-55
 Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 16/198 (8%)

Query: 4   QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           Q+ F  R  +VTG G+G+G+  A  L   GASV++      R+ D          V E+ 
Sbjct: 6   QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVG----RNPD-----KLAGAVQELE 56

Query: 64  SKGGKAVPNYNSVVD------GDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDW 116
           + G           D        + V       GR+  V++ AG   +     ++    W
Sbjct: 57  ALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAW 116

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +   D+++ G   V + A   M +   G  V  +S +    +     Y   K A+  L  
Sbjct: 117 RRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQ 176

Query: 177 TLSIEGEKNNIHCNVIVP 194
             + E   + +  N I P
Sbjct: 177 LAADELGASWVRVNSIRP 194

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  176 bits (449), Expect = 2e-55
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 11/197 (5%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           + +      +V ++ G    LG   A   A    ++V++          K S  A+ +  
Sbjct: 3   LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYH------QAKDSDTANKLKD 56

Query: 61  EIRSKGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           E+  +G K      + ++  +  K+   A + FG++DI IN  G +  K     S+ ++ 
Sbjct: 57  ELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFD 116

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
            +  ++   A+   + A  HM     G ++  A++         + Y+  K  +   +  
Sbjct: 117 AMDTINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRA 174

Query: 178 LSIEGEKNNIHCNVIVP 194
            S E  K  I  N I P
Sbjct: 175 ASKELMKQQISVNAIAP 191

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  179 bits (455), Expect = 2e-55
 Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 8/199 (4%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +P   R  G    +TGA  G+G++ AL  A+ GA++V+           K      T   
Sbjct: 37  LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKT--AQPHPKLLGTIYTAAE 94

Query: 61  EIRSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           EI + GGKA+P    V D  +I   V+ A++ FG IDI++NNA  +   +          
Sbjct: 95  EIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLD 154

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALVGLS 175
           L+ +V+  G +  S+A  P++KK     ++  +    L   +      Y+ AK  +    
Sbjct: 155 LMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYV 214

Query: 176 NTLSIEGEKNNIHCNVIVP 194
             ++ E  K  I  N + P
Sbjct: 215 LGMAEEF-KGEIAVNALWP 232

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  176 bits (449), Expect = 2e-55
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 19/209 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +   ++AIVTGAG+G+GR+ A+ LA  G  V +      R  D     A     AEI   
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAG----RRLD-----ALQETAAEI--- 72

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQD 121
           G  A+     V D D +       +E FGR+D++ NNAG          ++   W+ V D
Sbjct: 73  GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132

Query: 122 VHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            +LTG F  ++ A+  MK Q    GR++   S S        A Y+A K A+ GL+ + S
Sbjct: 133 TNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTS 192

Query: 180 IEGEKNNIHCNVIVP-TAASRLTEDILPP 207
           ++G  ++I C  I    A + + + +   
Sbjct: 193 LDGRVHDIACGQIDIGNADTPMAQKMKAG 221

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  177 bits (451), Expect = 2e-55
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 13/195 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            FDGR A+VTG  +G+G + A   A RGA +V++D+    D       A +  V  +R +
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDV----DQP-----ALEQAVNGLRGQ 78

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A      V   D++      A    G +D+V +NAGI+     A+++  DW+ V D+
Sbjct: 79  GFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDI 138

Query: 123 HLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
            L G+     A  P + +Q   G +  TAS +GL+ N G   Y  AK  +VGL+ TL+ E
Sbjct: 139 DLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLARE 198

Query: 182 GEKNNIHCNVIVPTA 196
            + N I  +V+ P  
Sbjct: 199 VKPNGIGVSVLCPMV 213

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  176 bits (449), Expect = 2e-55
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +G+VA+VTGA  G+GR++A  L  +GA V + D          + +A     A +  +
Sbjct: 4   MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW---------NLEAGVQCKAALHEQ 54

Query: 66  --GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
               K +     V D        +  +++FGR+DI++NNAG+  +K        +W+   
Sbjct: 55  FEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK--------NWEKTL 106

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRL---VMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
            ++L      +     +M KQN G     +  +S +GL+    Q  Y A+K  +VG + +
Sbjct: 107 QINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 166

Query: 178 LSIEGE--KNNIHCNVIVP 194
            ++      + +  N I P
Sbjct: 167 AALAANLMNSGVRLNAICP 185

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  175 bits (447), Expect = 3e-55
 Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+V++VTG+  G+GR+ A  LA  G++V++              +A           G
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS--------GERAKAVAEEIANKYG 56

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            KA     +++  + I    +        IDI++NNAGI RDK F R+S  DW+ V  V+
Sbjct: 57  VKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVN 116

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           LTG F V++ +   M KQ +GR+V  +S  G  GN GQ NYS  K  L+G + +L+ E  
Sbjct: 117 LTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELA 176

Query: 184 KNNIHCNVIVP 194
             N+  N + P
Sbjct: 177 PRNVLVNAVAP 187

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  176 bits (448), Expect = 3e-55
 Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 13/205 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+ A++TGA  G+G   A   A  GA +V++     RD      +      A     
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSG----RDVS----ELDAARRALGEQF 68

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G         + + D      + A E FG +D+++NNAGI   +         +     V
Sbjct: 69  GTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128

Query: 123 HLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +L     ++ A    M      G ++  AS + L        Y  +K  LV  +  L+ E
Sbjct: 129 NLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARE 188

Query: 182 GEKNNIHCNVIVPTA-ASRLTEDIL 205
              + I  N + PT   + + + + 
Sbjct: 189 LGPHGIRANSVCPTVVLTEMGQRVW 213

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  175 bits (446), Expect = 3e-55
 Identities = 66/191 (34%), Positives = 98/191 (51%), Gaps = 12/191 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            + +VA+VTGA  G+G   A  LA +GA+VV             S  +A+     ++ KG
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGT---------ATSQASAEKFENSMKEKG 53

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            KA     ++ D + I             IDI++NNAGI RD    R+S+ +WQ V + +
Sbjct: 54  FKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTN 113

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L+  FR+S+     M K+ +GR++   S  G  GN GQ NY AAK  ++G S +L+ E  
Sbjct: 114 LSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVA 173

Query: 184 KNNIHCNVIVP 194
             NI  NV+ P
Sbjct: 174 SRNITVNVVAP 184

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  176 bits (448), Expect = 3e-55
 Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 23/203 (11%)

Query: 3   EQVRFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +Q+   G+V +VTGA    G+G   A   AE GA+V +             ++ A+  V 
Sbjct: 14  DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYAS--------RAQGAEENVK 65

Query: 61  EIRSKGG-KA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISD 113
           E+    G KA      V +Y S    +K+V+  + +FG+ID  I NAG   D      S 
Sbjct: 66  ELEKTYGIKAKAYKCQVDSYESC---EKLVKDVVADFGQIDAFIANAGATADSGILDGSV 122

Query: 114 TDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMAL 171
             W  V  V L G F  ++A   H K++  G LV+TAS SG + NF   Q +Y+ AK   
Sbjct: 123 EAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGC 182

Query: 172 VGLSNTLSIEGEKNNIHCNVIVP 194
           + ++ +L+ E        N I P
Sbjct: 183 IHMARSLANEWRD-FARVNSISP 204

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  176 bits (449), Expect = 3e-55
 Identities = 65/194 (33%), Positives = 92/194 (47%), Gaps = 14/194 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R +G++AIVTGA +G+GR+ ALL A  GA VVV            +  A   +  EI   
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTAR---------NGNALAELTDEIAGG 55

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQD 121
           GG+A      V D       V+ A+  FG +D   NNAG L      + +S   W+   D
Sbjct: 56  GGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLD 115

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQANYSAAKMALVGLSNTLSI 180
            +LT AF  ++   P +     G L  T+S  G   G  G A Y+A+K  L+GL   L++
Sbjct: 116 TNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAV 175

Query: 181 EGEKNNIHCNVIVP 194
           E     I  N ++P
Sbjct: 176 ELGARGIRVNALLP 189

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  174 bits (443), Expect = 9e-55
 Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 18/205 (8%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGA------SVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
            + ++TGAG G+GR+ AL  A           V+V           +++   + +  E R
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLS--------SRTAADLEKISLECR 54

Query: 64  SKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           ++G         + D     ++    +E +G ID ++NNAG+ R  + + +++ D+    
Sbjct: 55  AEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTM 114

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +L G F +++A +  M++Q+ G +    S +        + Y  +K    GL  T+ +
Sbjct: 115 NTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 174

Query: 181 EGEKNNIHCNVIVPTA-ASRLTEDI 204
              K N+    + P A  + +   +
Sbjct: 175 YARKCNVRITDVQPGAVYTPMWGKV 199

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  175 bits (445), Expect = 1e-54
 Identities = 59/196 (30%), Positives = 86/196 (43%), Gaps = 12/196 (6%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M       GR A+VTGAG+G+GR+ A   A  GA V+              +     V  
Sbjct: 23  MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG----------RTDGVKEVAD 72

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQ--TALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           EI   GG A      + D +        L    R+D+++NNAGI+       +S   W+ 
Sbjct: 73  EIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWRE 132

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           V  V+L  A+ +SR+    M     GR+V  AS     G    A Y+A+K A+VGL+  L
Sbjct: 133 VLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRAL 192

Query: 179 SIEGEKNNIHCNVIVP 194
           + E     +  N + P
Sbjct: 193 ASEWAGRGVGVNALAP 208

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  173 bits (442), Expect = 2e-54
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+  I+TG   GLG   A      GA VV+ D+           +       E+   
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---------LDEEGAATAREL--- 49

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A   +  V   +   ++V  A E FG +D ++NNAGI         S   ++ V ++
Sbjct: 50  GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEI 109

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LTG F   +   P MK    G +V  +S +GL+G    ++Y A+K  + GLS   ++E 
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL 169

Query: 183 EKNNIHCNVIVP 194
             + I  N + P
Sbjct: 170 GTDRIRVNSVHP 181

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  174 bits (443), Expect = 3e-54
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 23/201 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  +  I+TG+  G+GR+ A+L A+ GA+V +            SS+  +     I   
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR---------SSERLEETRQIILKS 53

Query: 66  GGKAVPNYNSVV-------DGDKIVQTALENFGRIDIVINNAGILRDKSFARISD----T 114
           G       NSVV         D+I+ + L+ FG+ID+++NNAG     +F          
Sbjct: 54  GVSE-KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGID 112

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFGQANYSAAKMALVG 173
            +     ++L     +++   PH+     G +V  +S  +G         Y+ AK AL  
Sbjct: 113 IYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQ 171

Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
            + + +I+  K  I  N + P
Sbjct: 172 YTRSTAIDLAKFGIRVNSVSP 192

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  173 bits (441), Expect = 3e-54
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 18/189 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               +V IVTGA  G+GR+ A    + G+ V+   +              D +  +    
Sbjct: 5   DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSI------HDPGEAKYDHIECD---- 54

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V N + V      +    + +G I +++NNAGI        +S  +W+ + DV+L 
Sbjct: 55  ----VTNPDQV---KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLF 107

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G +  S+ A P+M +     +V  +S    +     + Y  +K A++GL+ +++++    
Sbjct: 108 GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP- 166

Query: 186 NIHCNVIVP 194
            + CN + P
Sbjct: 167 LLRCNAVCP 175

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  173 bits (440), Expect = 4e-54
 Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 21/198 (10%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           +G+V +VTGA  G+GR  AL L + GA+V +          G+       V  E +S GG
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYIT---------GRHLDTLRVVAQEAQSLGG 54

Query: 68  KAVPNYNSVVDGDKIV----QTALENFGRIDIVINNAGIL-------RDKSFARISDTDW 116
           + VP         ++     Q   E  GR+D+++NNA          R+K+F     + W
Sbjct: 55  QCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMW 114

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
             + +V L G +  S      M     G +V+ +S    L       Y   K A   L+ 
Sbjct: 115 DDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAA 173

Query: 177 TLSIEGEKNNIHCNVIVP 194
             + E  ++ + C  + P
Sbjct: 174 DCAHELRRHGVSCVSLWP 191

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  173 bits (441), Expect = 4e-54
 Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 13/190 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             +VAIVTGA  G+G + A  LA  G +VV+N  G         + AA+ V  +I + GG
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAG--------KAAAAEEVAGKIEAAGG 77

Query: 68  KAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           KA+    + +      ++  TA E FG +D+++NNAGI+   + A   D  +  V  V+L
Sbjct: 78  KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNL 137

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G F   R A   +  +  GR++  +++   L +     Y+AAK  +  +++ LS E   
Sbjct: 138 KGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRG 195

Query: 185 NNIHCNVIVP 194
            +I  N + P
Sbjct: 196 RDITVNAVAP 205

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  173 bits (441), Expect = 8e-54
 Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 19/198 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF G+  I+TG+  G+GRS A++ A+ GA V +            +    +    +I   
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR---------NEDRLEETKQQILKA 73

Query: 66  GGKAVPNYNSVVD------GDKIVQTALENFGRIDIVINNAGILRDKS--FARISDTDWQ 117
           G  A      V D       D I+ T L  FG+IDI++NNAG                +Q
Sbjct: 74  GVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQ 133

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYSAAKMALVGLSN 176
               ++      +++    H+ K   G +V  +S  +G   + G   Y+ AK AL   + 
Sbjct: 134 KTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR 192

Query: 177 TLSIEGEKNNIHCNVIVP 194
             +I+  ++ +  N + P
Sbjct: 193 CTAIDLIQHGVRVNSVSP 210

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  171 bits (437), Expect = 1e-53
 Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 28/200 (14%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  R  +V GAG  +GR+ A+  A+ GA+VV+   G        +++ A T VAEI   
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG--------AAEGAATAVAEIEKL 56

Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDW 116
           G  A+      +  D          +  A + FG I  +++ AG L   K+ A + +  W
Sbjct: 57  GRSAL-----AIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFW 111

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLS 175
             V DV+LT  F  ++ A P M K   G +V  +S +G  G   G   Y+ +K A++  +
Sbjct: 112 HQVLDVNLTSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFT 169

Query: 176 NTLSIE-GEKNNIHCNVIVP 194
             L+ E G K  I  N + P
Sbjct: 170 RGLAKEVGPK--IRVNAVCP 187

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  171 bits (437), Expect = 1e-53
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 17/194 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             + +VAI+TGA  G+G   + +LA  GA VV+ DL                +     S 
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADL------------PETDLAGAAASV 55

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGIL--RDKSFARISDTDWQLVQ 120
           G  AV +   + +   +   +   ++ FGR+DIV NNA      D    +++   W    
Sbjct: 56  GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTF 115

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            V+  G   + + A P +     G +V  +S +          Y+  K A+  L+  ++ 
Sbjct: 116 TVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVAT 175

Query: 181 EGEKNNIHCNVIVP 194
           +  ++ + CN I P
Sbjct: 176 QYGRHGVRCNAIAP 189

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  171 bits (436), Expect = 2e-53
 Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 14/193 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA+ TGAG G+GR  A+ L  RGASVVVN           SSKAA+ VVAE++  
Sbjct: 18  PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS--------SSKAAEEVVAELKKL 69

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G + V    + +   +   +   A+ +FG +D V++N+G+        ++   +  V ++
Sbjct: 70  GAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNL 129

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNFGQANYSAAKMALVGLSNTLSIE 181
           +  G F V++    H   +  GR+++T+S +  + G    A Y+ +K A+ G     +++
Sbjct: 130 NTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVD 187

Query: 182 GEKNNIHCNVIVP 194
                +  N I P
Sbjct: 188 CGAKGVTVNCIAP 200

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  171 bits (435), Expect = 2e-53
 Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 9/188 (4%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             GR A+VTGA  G+G + A     +GA V ++         G        + A++    
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLH---------GTREDKLKEIAADLGKDV 75

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                N +      ++ + A      IDI++NNAGI RD  F R+ D DW  V  V+LT 
Sbjct: 76  FVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTA 135

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           A  ++R     M ++ YGR++   S  G++GN GQ NY AAK  L+G S  L+ E    N
Sbjct: 136 ASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRN 195

Query: 187 IHCNVIVP 194
           I  N I P
Sbjct: 196 ITVNCIAP 203

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  170 bits (434), Expect = 3e-53
 Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 15/192 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--K 65
            G++A+VT   +GLG + AL LA  GA +++      R+ +       +   + I S   
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFS----RNRE-----KLEAAASRIASLVS 56

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +      +     D D++ + A +  G  DI++ + G  R   F  +   DW     +
Sbjct: 57  GAQVDIVAGDIREPGDIDRLFEKARD-LGGADILVYSTGGPRPGRFMELGVEDWDESYRL 115

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
               A  V R A   M ++ +GR+V   S + L      A  +  ++ ++G+  TL++E 
Sbjct: 116 LARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175

Query: 183 EKNNIHCNVIVP 194
             + +  N ++P
Sbjct: 176 APHGVTVNAVLP 187

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  170 bits (434), Expect = 4e-53
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 13/191 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+ A+VTG+  GLG +YA  LA  GA V++N            +      V  +  KG 
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILN---------DIRATLLAESVDTLTRKGY 58

Query: 68  KAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            A      V D                 +DI+INNAGI   K    +   +WQ V D +L
Sbjct: 59  DAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNL 118

Query: 125 TGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           T AF VSR+A   M  +N  G+++   S +        A Y+AAK  +  L+ +++ E  
Sbjct: 119 TSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWA 178

Query: 184 KNNIHCNVIVP 194
           + NI  N I P
Sbjct: 179 QFNIQTNAIGP 189

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  170 bits (433), Expect = 4e-53
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 13/188 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+ +++TGA +G+G + A LL + G+ V+++         G + +   ++   ++   
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIIS---------GSNEEKLKSLGNALKDNY 62

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              V N   + + ++     +     +DI++ NAGI  D    R+ D D+  V D++L  
Sbjct: 63  TIEVCN---LANKEE-CSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKA 118

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F ++R A   M ++ YGR++  +S  G+ GN GQANY A+K  L+G++ +LS E     
Sbjct: 119 NFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRG 178

Query: 187 IHCNVIVP 194
           I  N + P
Sbjct: 179 ITVNAVAP 186

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  171 bits (436), Expect = 6e-53
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 25/220 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-- 63
              G+VAIVTG   G+G++    L E G++VV+           +  +   +   E++  
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIA---------SRKLERLKSAADELQAN 65

Query: 64  ---SKGGKAVP------NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT 114
              +K  + +P      N   V   + +V++ L+ FG+I+ ++NN G         IS  
Sbjct: 66  LPPTKQARVIPIQCNIRNEEEV---NNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSK 122

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            W  V + +LTG F + +A +    K++ G +V         G     +  AA+  +  L
Sbjct: 123 GWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNL 181

Query: 175 SNTLSIEGEKNNIHCNVIVPTA-ASRLTEDILPPGSYPVK 213
           + +L++E   + I  N + P    S+   +          
Sbjct: 182 TKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFF 221

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  169 bits (431), Expect = 6e-53
 Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 17/213 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+V I+T A  G+G++ AL  A  GA V+  D+         +      +      +
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI---------NESKLQELEKYPGIQ 53

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                     V    + +        R+D++ N AG +   +     + DW    ++++ 
Sbjct: 54  TRVL-----DVTKKKQ-IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR 107

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQANYSAAKMALVGLSNTLSIEGEK 184
             + + +A  P M  Q  G ++  +S +  + G   +  YS  K A++GL+ +++ +  +
Sbjct: 108 SMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQ 167

Query: 185 NNIHCNVIVP-TAASRLTEDILPPGSYPVKGFD 216
             I CN + P T  +   ++ +     P +  +
Sbjct: 168 QGIRCNCVCPGTVDTPSLQERIQARGNPEEARN 200

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  170 bits (432), Expect = 8e-53
 Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 14/198 (7%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M   +   G+ A VTG   G+G + A  LA  GA+V +  +         +++ A  VV+
Sbjct: 23  MMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN--------AAERAQAVVS 74

Query: 61  EIRSKGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           EI   GG+AV    +       ++ ++  +E  G +DI++N+AGI         +  D+ 
Sbjct: 75  EIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFD 134

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFGQANYSAAKMALVGLSN 176
            V  V+    F   R+A  H+     GR++   SN + L+   G + YSA+K AL GL+ 
Sbjct: 135 EVMAVNFRAPFVAIRSASRHLGDG--GRIITIGSNLAELVPWPGISLYSASKAALAGLTK 192

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L+ +     I  N++ P
Sbjct: 193 GLARDLGPRGITVNIVHP 210

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  170 bits (432), Expect = 1e-52
 Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 17/196 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA VTG+  G+G + A   A+ GA V +            S  A +      ++ 
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYN---------SHPADEKAEHLQKTY 81

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFA--RISDTDWQLVQ 120
           G  +     ++ D     + +    ++FG ID+ + NAG+   +       +   W  + 
Sbjct: 82  GVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKII 141

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--QANYSAAKMALVGLSNTL 178
            V L G +  S       KK   G L++T+S SG + N    QA Y+ AK A   L+ +L
Sbjct: 142 SVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSL 201

Query: 179 SIEGEKNNIHCNVIVP 194
           +IE        N I P
Sbjct: 202 AIEWAP-FARVNTISP 216

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  169 bits (431), Expect = 1e-52
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+V+G   G+G S+   +   GA VV  D+           +    + AE+   
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---------LDEEGKAMAAEL--- 51

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
              A   +  V         V TA+  FG + +++NNAGIL   +    + T+WQ + DV
Sbjct: 52  ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDV 111

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LTG F   RA    MK+   G ++  +S  GL G      Y+A K A+ GL+ + ++E 
Sbjct: 112 NLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL 171

Query: 183 EKNNIHCNVIVP 194
             + I  N I P
Sbjct: 172 GPSGIRVNSIHP 183

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  170 bits (432), Expect = 1e-52
 Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 17/194 (8%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              +VA +TG G+G+G   A +    G   V+              +          + G
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASR--------SLPRVLTAARKLAGATG 76

Query: 67  GKAVP------NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
            + +P         +V      V  AL+ FGRIDI+IN A          +S   ++ V 
Sbjct: 77  RRCLPLSMDVRAPPAV---MAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVM 133

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           D+  +G F VSR  +    + + G +V   +  G  G   Q +  +AK A+  ++  L++
Sbjct: 134 DIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAV 193

Query: 181 EGEKNNIHCNVIVP 194
           E    NI  N + P
Sbjct: 194 EWGPQNIRVNSLAP 207

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  169 bits (431), Expect = 2e-52
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 14/193 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +G+VA+VTGAG G+GR  A+ L  RG  V+VN           S+++A+ VVA I+  
Sbjct: 26  SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNY--------ANSTESAEEVVAAIKKN 77

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A     N   V D  ++ + A++ FG++DIV +N+G++       ++  ++  V  +
Sbjct: 78  GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTI 137

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNTLSIE 181
           +  G F V+R A+ H+  +  GRL++  S +G        A YS +K A+   +  ++I+
Sbjct: 138 NTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAID 195

Query: 182 GEKNNIHCNVIVP 194
                I  NV+ P
Sbjct: 196 MADKKITVNVVAP 208

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  168 bits (427), Expect = 3e-52
 Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 15/191 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              GR  +VTGAG G+GR     L   GA VV       R             +  +  +
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVS----RTQA---------DLDSLVRE 50

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                P    + D +   + AL + G +D+++NNA +   + F  ++   +    +V+L 
Sbjct: 51  CPGIEPVCVDLGDWEA-TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLR 109

Query: 126 GAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
              +VS+     +  +   G +V  +S          + Y + K AL  L+  +++E   
Sbjct: 110 AVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGP 169

Query: 185 NNIHCNVIVPT 195
           + I  N + PT
Sbjct: 170 HKIRVNAVNPT 180

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  168 bits (428), Expect = 3e-52
 Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M E     GRVA+VTG   GLG   A  LAE G SVVV              +A++    
Sbjct: 13  MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR--------NLEEASEAAQK 64

Query: 61  EIRSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
                G + +     V + +   K+++   E FG++D V+N AGI R          +++
Sbjct: 65  LTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFR 124

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYSAAKMALVGLSN 176
            V +V+L G + V R A+  +++ +   ++   S     +     + Y+A+K  +  L+ 
Sbjct: 125 QVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTK 184

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L+ E  +  I  NVI P
Sbjct: 185 ALAKEWGRYGIRVNVIAP 202

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  168 bits (427), Expect = 5e-52
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 17/189 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F  +VAIVTG  +G+G +    L   GA VV   L           K+   V    +  
Sbjct: 11  EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSL---------DEKSDVNVSDHFKID 61

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V N   V    + V+   + +GRIDI++NNAGI +           W+ + DV++ 
Sbjct: 62  ----VTNEEEV---KEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVN 114

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G++ +++   P M    +G ++  AS          A Y  +K AL+GL+ +++I+    
Sbjct: 115 GSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP- 173

Query: 186 NIHCNVIVP 194
            I CN + P
Sbjct: 174 KIRCNAVCP 182

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  167 bits (425), Expect = 6e-52
 Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 13/192 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG  A VTGAG+G+G       A  GA +++ D    R+       A D    E+ + 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILID----REAA-----ALDRAAQELGAA 58

Query: 66  GGKAVP-NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
               +  +             A E    + I++N+AGI R        D  W+ V  V++
Sbjct: 59  VAARIVADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNV 117

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSIEG 182
            G F  SRA    M  +  G +V   S SG + N  Q  ++Y A+K A+  L+  L+ E 
Sbjct: 118 DGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEW 177

Query: 183 EKNNIHCNVIVP 194
               +  N + P
Sbjct: 178 AGRGVRVNALAP 189

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  172 bits (439), Expect = 6e-52
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 12/190 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            DG+VA+VTGA  G+G + A + A  GA+VV  D             AA+ +       G
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAID----------VDGAAEDLKRVADKVG 260

Query: 67  GKAVP-NYNSVVDGDKIVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           G A+  +  +    DKI     E+ G ++DI++NNAGI RDK  A + +  W  V  V+L
Sbjct: 261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNL 320

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
               R++     +      GR++  +S +G+ GN GQ NY+  K  ++GL+  L+     
Sbjct: 321 LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLAD 380

Query: 185 NNIHCNVIVP 194
             I  N + P
Sbjct: 381 KGITINAVAP 390

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  167 bits (426), Expect = 9e-52
 Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 23/201 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  +VAI+TG+  G+GR+ A+L A  GA V +             ++  +    +I + 
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR---------HAERLEETRQQILAA 53

Query: 66  GGKAVPNYNSVV-------DGDKIVQTALENFGRIDIVINNAGIL----RDKSFARISDT 114
           G     N NSVV         D+I+ T L  FG++DI++NNAG      + K+    S  
Sbjct: 54  GVSE-QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIE 112

Query: 115 DWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYSAAKMALVG 173
            +    +++L     +++ A PH+     G +V  +S  SGL        YS AK A+  
Sbjct: 113 SYDATLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLHATPDFPYYSIAKAAIDQ 171

Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
            +   +I+  ++ I  N I P
Sbjct: 172 YTRNTAIDLIQHGIRVNSISP 192

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  166 bits (423), Expect = 1e-51
 Identities = 35/196 (17%), Positives = 63/196 (32%), Gaps = 23/196 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               +  I   A  G+G   +  L +R     V           +          +  + 
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVIL--------DRVENPTALAELKAINP 53

Query: 66  GGKAVPNY----NSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
                 +       V +  K+++   +    +DI+IN AGIL D           +    
Sbjct: 54  KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH--------QIERTIA 105

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGR---LVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           ++ TG    + A      K+  G    +    S +G         YSA+K A+V  +N+L
Sbjct: 106 INFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSL 165

Query: 179 SIEGEKNNIHCNVIVP 194
           +       +    I P
Sbjct: 166 AKLAPITGVTAYSINP 181

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  166 bits (422), Expect = 1e-51
 Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 17/187 (9%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A+VTG   G+GR+ A  L  RG  V +              +AA ++       G   
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRN--------PEEAAQSL-------GAVP 47

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
           +P      D   +V+ ALE  G + ++++ A +   K    +S  +W+ V  +HL  AF 
Sbjct: 48  LPTDLEKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFL 107

Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLL--GNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
           +++AA PHM +  +GR++   S +     G      Y+ AK AL+GL+  L+ E  +  I
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167

Query: 188 HCNVIVP 194
             N++ P
Sbjct: 168 RVNLLCP 174

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  166 bits (423), Expect = 2e-51
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 20/197 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             +G+VA++TGAG+G G   A   A+ GA VV+ D              A+ V  EI   
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR---------DKAGAERVAGEI--- 53

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQD 121
           G  A+     +         V+ AL  FG++DI++NNAGI  + ++   +   ++  +  
Sbjct: 54  GDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVM----TASNSGLLGNFGQANYSAAKMALVGLSNT 177
           V++ G + ++    PH K+             AS          A Y+A K  +V ++  
Sbjct: 114 VNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKA 173

Query: 178 LSIEGEKNNIHCNVIVP 194
           L+IE     I    + P
Sbjct: 174 LAIELAPAKIRVVALNP 190

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  165 bits (421), Expect = 2e-51
 Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 15/191 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G  A+VTGAG G+GR     L   GA VV       R           ++  E    
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT----RTNS-----DLVSLAKECPGI 54

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V     + D D   + AL   G +D+++NNA ++  + F  ++   +     V+L 
Sbjct: 55  EPVCV----DLGDWDA-TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR 109

Query: 126 GAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
             F+VS+     M  +   G +V  +S    +       YS+ K A+  L+  +++E   
Sbjct: 110 SVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP 169

Query: 185 NNIHCNVIVPT 195
           + I  N + PT
Sbjct: 170 HKIRVNSVNPT 180

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  165 bits (421), Expect = 3e-51
 Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 16/195 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
                +AI+TGA  G+G   A  LA  G  VV+           +S +  + V  EI   
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLI---------ARSKQNLEKVHDEIMRS 54

Query: 66  GGKAVPNYNSVVD------GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
                      +D       D  ++   + +G +DI++N A +  D S +   D +++ +
Sbjct: 55  NKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVD-NFRKI 113

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            ++++   + + +     MK Q  G +   AS +   G      Y + K AL+GL+ +L 
Sbjct: 114 MEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLY 173

Query: 180 IEGEKNNIHCNVIVP 194
            E     I    + P
Sbjct: 174 RELAPLGIRVTTLCP 188

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  165 bits (419), Expect = 5e-51
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 17/192 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            + G+ AIV G   G+G +    L E GA V++          G++      +  E    
Sbjct: 5   NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLT---------GRNESNIARIREEF--- 52

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +      +   + +   +   A +  G ID++  NAG+   + F ++S+  +     V
Sbjct: 53  GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAV 112

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +  GAF   +   P +++   G +V T+S +   G+ G + YSA+K ALV  ++ L+ E 
Sbjct: 113 NTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAEL 170

Query: 183 EKNNIHCNVIVP 194
               I  N + P
Sbjct: 171 LPRGIRVNSVSP 182

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  165 bits (421), Expect = 6e-51
 Identities = 42/218 (19%), Positives = 81/218 (37%), Gaps = 32/218 (14%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +P     +   A+VTGA   +GR+ A+ L + G  VV++           S++AA ++  
Sbjct: 15  VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN--------SAEAAVSLAD 66

Query: 61  EI-RSKGGKAVP-------NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARIS 112
           E+ + +   AV        +       ++I+ +    FGR D+++NNA         +  
Sbjct: 67  ELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGD 126

Query: 113 DTD----------WQLVQDVHLTGAFRVSRAAWPHMK------KQNYGRLVMTASNSGLL 156
             D             +   +    F ++ +     K        +   +V         
Sbjct: 127 HEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQ 186

Query: 157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
                + Y+  K ALVGL+ + ++E     I  N + P
Sbjct: 187 PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP 224

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  163 bits (416), Expect = 1e-50
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 17/190 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+V +VTG   G+G+S   +L       VV  +        +S      +  +    G +
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGV-------ARSEAPLKKLKEKY---GDR 51

Query: 69  AVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHL 124
                  + +     ++V  A++  G+ID ++ NAG+L   ++   I    W+ + D++ 
Sbjct: 52  FFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF 111

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
                +   A P +KK N G +V  +S++  +       Y ++K AL   + TL+   E+
Sbjct: 112 FSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLAN--EE 168

Query: 185 NNIHCNVIVP 194
             +    + P
Sbjct: 169 RQVKAIAVAP 178

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  164 bits (417), Expect = 2e-50
 Identities = 58/193 (30%), Positives = 100/193 (51%), Gaps = 14/193 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VA+VTG+G G+G + A+ L   GA VVVN           S+K A+ VV+EI++ 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNY--------ANSTKDAEKVVSEIKAL 66

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G  A+    +   V +  K+   A+ +FG +DI ++N+G++       +++ ++  V  +
Sbjct: 67  GSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +  G F V+R A+ H+ +   GR+V+T+S  S        + YS +K A+       S +
Sbjct: 127 NTRGQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKD 184

Query: 182 GEKNNIHCNVIVP 194
                I  N + P
Sbjct: 185 CGDKKITVNAVAP 197

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  164 bits (417), Expect = 2e-50
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 22/205 (10%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +  Q   D  V +VTG   G+G +   L A +G  V VN           + +AAD VVA
Sbjct: 18  LYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAA--------NREAADAVVA 69

Query: 61  EIRSKGGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR-DKSFARISD 113
            I   GG+A      V N   +     +       FGR+D ++NNAGI+   +    +S 
Sbjct: 70  AITESGGEAVAIPGDVGNAADI---AAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSV 126

Query: 114 TDWQLVQDVHLTGAFRVSRAAWPHMKKQ---NYGRLVMTASNSGLLGNFGQ-ANYSAAKM 169
              + +  V++TG+   +  A   M +      G +V  +S + +LG+  Q  +Y+A+K 
Sbjct: 127 ERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKA 186

Query: 170 ALVGLSNTLSIEGEKNNIHCNVIVP 194
           A+   +  L+ E     I  N + P
Sbjct: 187 AIDTFTIGLAREVAAEGIRVNAVRP 211

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  163 bits (415), Expect = 2e-50
 Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 17/194 (8%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
              +  F  R  +VTG   G+G + A  LA  G  V V   G      G      D    
Sbjct: 7   EGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG-APKGLFGVEVD---- 61

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
                    V + ++V   D+      E+ G ++++++NAG+  D    R+++  ++ V 
Sbjct: 62  ---------VTDSDAV---DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVI 109

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + +LTGAFRV++ A   M++  +GR++   S SGL G   QANY+A+K  ++G++ +++ 
Sbjct: 110 NANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIAR 169

Query: 181 EGEKNNIHCNVIVP 194
           E  K N+  NV+ P
Sbjct: 170 ELSKANVTANVVAP 183

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  162 bits (413), Expect = 4e-50
 Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 16/195 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VAI+TG   G+G + A    E GA V++             S   +     + + 
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR---------HSDVGEKAAKSVGT- 52

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             +     +   D D   K+     + FG +  ++NNAGI  +KS    +  +W+ +  V
Sbjct: 53  PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAV 112

Query: 123 HLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +L G F  +R     MK +  G  ++  +S  G +G+     Y+A+K A+  +S + +++
Sbjct: 113 NLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

Query: 182 --GEKNNIHCNVIVP 194
              +  ++  N + P
Sbjct: 173 CALKDYDVRVNTVHP 187

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  162 bits (412), Expect = 5e-50
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +  +V  A  G+GR+ A +L++ GA V +      R+ +         VV ++R     
Sbjct: 19  DKGVLVLAASRGIGRAVADVLSQEGAEVTICA----RNEELLKRSGHRYVVCDLR----- 69

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAF 128
                       K +    E    +DI++ NAG  +   F  +++ D++   D       
Sbjct: 70  ------------KDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI 117

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
           ++ R   P MK++ +GR+V   S S +         ++A+MAL G   TLS E     I 
Sbjct: 118 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGIT 177

Query: 189 CNVIVP 194
            N + P
Sbjct: 178 VNCVAP 183

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  162 bits (413), Expect = 8e-50
 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 22/197 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G VA++TG  +GLGR+        GA V V D             +A+ +     + 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDK------------SAERLRELEVAH 49

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTD-----WQ 117
           GG AV    +  S+ D  +  +  L  FG+ID +I NAGI    +       D     + 
Sbjct: 50  GGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFD 109

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
            +  V++ G     +A  P +     G +V T SN+G   N G   Y+A K A+VGL   
Sbjct: 110 DIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQ 168

Query: 178 LSIEGEKNNIHCNVIVP 194
           ++ E    ++  N + P
Sbjct: 169 MAFELAP-HVRVNGVAP 184

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  161 bits (409), Expect = 3e-49
 Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 17/192 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R + ++A++TGA +G+G + A      GA V +      R  D       D  +AEI   
Sbjct: 26  RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITG----RRKD-----VLDAAIAEI--- 73

Query: 66  GGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG AV    +  ++ + D++ +      GRID++  NAG         +++  +    D 
Sbjct: 74  GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++ G     + A P + +     +V+T S +G  G    + Y+A+K AL   +    ++ 
Sbjct: 134 NVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDL 191

Query: 183 EKNNIHCNVIVP 194
           +   I  N + P
Sbjct: 192 KDRGIRINTLSP 203

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  160 bits (407), Expect = 3e-49
 Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 17/188 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              R  +VTG   G+G + A   A+ G  V +           +S +  +  +A      
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAIT---------YRSGEPPEGFLA------ 63

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                +       ++  +   E  G ++++I NAG+ +D+   R+S+ D+  V + +LTG
Sbjct: 64  --VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTG 121

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            FRV + A   M +   GR+V+ +S  GLLG+ GQANY+A+K  LVG + +L+ E    N
Sbjct: 122 TFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRN 181

Query: 187 IHCNVIVP 194
           I  NV+ P
Sbjct: 182 ITFNVVAP 189

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  160 bits (408), Expect = 3e-49
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 15/194 (7%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G + ++TGAG G+GR  A   A+  + +V+ D     +  G      +   A+ +  G
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD----INKHG-----LEETAAKCKGLG 79

Query: 67  GKAVPNYNSVVDGDKIVQTA---LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            K         + + I  +A       G + I++NNAG++         D   +   +V+
Sbjct: 80  AKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVN 139

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE-- 181
           +   F  ++A  P M K N+G +V  AS +G +       Y ++K A VG   TL+ E  
Sbjct: 140 VLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELA 199

Query: 182 -GEKNNIHCNVIVP 194
             +   +    + P
Sbjct: 200 ALQITGVKTTCLCP 213

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  161 bits (410), Expect = 5e-49
 Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 21/211 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK- 65
           F G+VA +TG G GLG+    LL+  GA  V+      R  D            +I S+ 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIAS----RKMD-----VLKATAEQISSQT 74

Query: 66  GGKAVP------NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           G K         + + V      V   ++  G  +IVINNA         R+S   W+ +
Sbjct: 75  GNKVHAIQCDVRDPDMV---QNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTI 131

Query: 120 QDVHLTGAFRVSRAAWPHM-KKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
            D+ L G   V+      + K Q     +   +     G+      ++AK  +  +S +L
Sbjct: 132 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSL 191

Query: 179 SIEGEKNNIHCNVIVPTA-ASRLTEDILPPG 208
           + E  K  +  NVI P    ++     L P 
Sbjct: 192 AAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT 222

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  160 bits (406), Expect = 7e-49
 Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 32/213 (15%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS- 64
             +   A++TG    +G S A+ L ++G  VVV+           S  AA  +VAE+ + 
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRH--------SEGAAQRLVAELNAA 59

Query: 65  KGGKA------VPNYNSVVDG-DKIVQTALENFGRIDIVINNAGILRD-----------K 106
           + G A      +   +S++D  + I+  +   FGR D+++NNA                 
Sbjct: 60  RAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGA 119

Query: 107 SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK-----KQNYGRLVMTASNSGLLGNFGQ 161
           + A+  D     +   +      + RA           +     +V        L   G 
Sbjct: 120 ADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGF 179

Query: 162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
             Y+ AK AL GL+   ++E    +I  N + P
Sbjct: 180 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAP 212

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  158 bits (403), Expect = 2e-48
 Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 18/198 (9%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M    R+ G+V +VTG G G+G          GA VV+ D                 +  
Sbjct: 1   MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---------DESGGRALEQ 51

Query: 61  EIRSKGGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDW 116
           E+      AV     V   D    +V   +  FGR+D V+NNAG     +     S   +
Sbjct: 52  EL----PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGF 107

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           + + +++L G + +++ A P+++K   G ++  +S  G +G      Y A K A+  ++ 
Sbjct: 108 RQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTK 166

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L+++     +  N I P
Sbjct: 167 ALALDESPYGVRVNCISP 184

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  155 bits (395), Expect = 1e-47
 Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 16/191 (8%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
               IVTGAG+GLGR+  + L ERG  V +      R                +   G  
Sbjct: 3   LGHIIVTGAGSGLGRALTIGLVERGHQVSMMG----RRYQ-----RLQQQELLL---GNA 50

Query: 69  AVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
            +     +   +        A+E  G  ++V++ AG          +    + V + +L 
Sbjct: 51  VIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLV 110

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
               V++     + ++  G L    S++  +G   ++ Y A+K  + G   +L  E + +
Sbjct: 111 STILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDS 169

Query: 186 NIHCNVIVPTA 196
            +    + P+ 
Sbjct: 170 PLRLVNLYPSG 180

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  156 bits (396), Expect = 2e-47
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
               +       ++TGA   +G   AL L E G  V+++          ++  A+   V 
Sbjct: 19  FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISY---------RTEHAS---VT 66

Query: 61  EIRSKGGKAVP-NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV 119
           E+R  G  A+  +++        +         +  V++NA     ++       ++  +
Sbjct: 67  ELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETP-GEEADNFTRM 125

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             VH+   + ++    P +       +V  + +    G+     Y A K  L  L+ + +
Sbjct: 126 FSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFA 185

Query: 180 IE 181
             
Sbjct: 186 AR 187

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  155 bits (394), Expect = 7e-47
 Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 49/228 (21%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G 66
              VA+VTGA   LGRS A  L   G +V ++           S+  A+ + A + ++  
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR--------SAAEANALSATLNARRP 59

Query: 67  GKAV--------------------PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDK 106
             A+                              ++V     ++GR D+++NNA      
Sbjct: 60  NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPT 119

Query: 107 SFARISDTDWQL--------------VQDVHLTGAFRVSRAAWPHM------KKQNYGRL 146
              R  +   +               +   +    + + +A    +       +     +
Sbjct: 120 PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSI 179

Query: 147 VMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           +            G   Y+ AK AL GL+ + ++E     I  N + P
Sbjct: 180 INMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP 227

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  153 bits (390), Expect = 1e-46
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 18/194 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+VTG  +G+G     LL   GA V  +D+         +  A   + AE+   
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---------NEAAGQQLAAEL--- 50

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G +++   + V        ++       G +++++NNAGIL           D+  +  +
Sbjct: 51  GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKI 110

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE- 181
           +    F   +     MK+   G ++  AS S  L     A YSA+K A+  L+   ++  
Sbjct: 111 NTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSC 169

Query: 182 GEKN-NIHCNVIVP 194
            ++   I  N I P
Sbjct: 170 RKQGYAIRVNSIHP 183

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  153 bits (388), Expect = 2e-46
 Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 19/196 (9%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+VTGA  G+GR+ A  LA  GA V ++         G   + A+  V EI+S GG
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAIHY--------GNRKEEAEETVYEIQSNGG 57

Query: 68  KAVP---NYNSVVDGDKIVQTALENF------GRIDIVINNAGILRDKSFARISDTDWQL 118
            A     N  S+   + +  +            + DI+INNAGI         ++  +  
Sbjct: 58  SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR 117

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           +  V+    F + + A   +  ++  R++  +S +  +       YS  K A+  ++ TL
Sbjct: 118 MVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTL 175

Query: 179 SIEGEKNNIHCNVIVP 194
           + +     I  N I+P
Sbjct: 176 AKQLGARGITVNAILP 191

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  154 bits (391), Expect = 5e-46
 Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 49/228 (21%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G 66
              VA+VTGA   LGRS A  L   G +V ++           S+  A+ + A + ++  
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR--------SAAEANALSATLNARRP 96

Query: 67  GKAV--------------------PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDK 106
             A+                              ++V     ++GR D+++NNA      
Sbjct: 97  NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPT 156

Query: 107 SFARISDTDWQL--------------VQDVHLTGAFRVSRAAWPHM------KKQNYGRL 146
              R  +   +               +   +    + + +A    +       +     +
Sbjct: 157 PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSI 216

Query: 147 VMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           +            G   Y+ AK AL GL+ + ++E     I  N + P
Sbjct: 217 INMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP 264

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  152 bits (385), Expect = 6e-46
 Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 23/197 (11%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           +  +     +  +V G    LG         +  + +  D   + + +   S        
Sbjct: 14  LVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDF--RENPNADHSFTIK---- 67

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLV 119
                          +     +++       ++D  +  AG      + +       + +
Sbjct: 68  ---------DSGEEEI---KSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGM 115

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
            D++L  AF  +      + +   G  V+T +++ L    G   Y A K A   +   L+
Sbjct: 116 IDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLA 173

Query: 180 IE--GEKNNIHCNVIVP 194
            E  G         I+P
Sbjct: 174 SENGGLPAGSTSLGILP 190

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  151 bits (384), Expect = 7e-46
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 19/188 (10%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
                 +VTG   G+G++   LL +     V+N        D + S +A+ +   I++  
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINI-------DIQQSFSAENLKF-IKA-- 51

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              +     +     ++          D +  NAGIL   S   I     + V D+++  
Sbjct: 52  --DLTKQQDI---TNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWS 104

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           +    +    ++K      +V   S+   +       Y+ +K A+  ++ +L+++  K  
Sbjct: 105 SIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQ 162

Query: 187 IHCNVIVP 194
           I  N + P
Sbjct: 163 IRVNTVCP 170

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  151 bits (384), Expect = 2e-45
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            GR+A+VTG   G+G+  A  L E GA V +           + ++A       +    G
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFIC---------ARDAEACADTATRLS-AYG 77

Query: 68  KAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
                  + +S     ++ Q   E   R+DI++NNAG     +      + W+ V  +++
Sbjct: 78  DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNV 137

Query: 125 TGAFRVSRAAWPHMKK----QNYGRLVMTASNSGLLGNFGQA-NYSAAKMALVGLSNTLS 179
           T  F   +   P +++    +N  R++   S +G+     QA  Y  +K AL  LS  L+
Sbjct: 138 TSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLA 197

Query: 180 IEGEKNNIHCNVIVPTA-ASRLTEDIL 205
            E    +I+ NVI P    SR+T  I 
Sbjct: 198 KELVGEHINVNVIAPGRFPSRMTRHIA 224

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  151 bits (383), Expect = 6e-45
 Identities = 51/205 (24%), Positives = 74/205 (36%), Gaps = 26/205 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F GR A VTG   G+G      L  +G  V + D       D     + D  +A + ++
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIAD----IRQD-----SIDKALATLEAE 55

Query: 66  GGKA--------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           G           V +                 FG + I+ NNAG+   +     S  DW 
Sbjct: 56  GSGPEVMGVQLDVASREGF---KMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWD 112

Query: 118 LVQDVHLTGAFRVSRAAWPHMKK------QNYGRLVMTASNSGLLGNFGQANYSAAKMAL 171
            +  V+L G         P M +      Q  G +V TAS +  L       Y+  K A+
Sbjct: 113 WLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAV 172

Query: 172 VGLSNTLSIEGEKNNIHCNVIVPTA 196
            GLS +L     K  I  +V+ P  
Sbjct: 173 RGLSESLHYSLLKYEIGVSVLCPGL 197

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  147 bits (374), Expect = 6e-44
 Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 20/197 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   +VAI+TG   G+G + A L    GA VV+ D+         +      V   I S 
Sbjct: 13  RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI---------ADDHGQKVCNNIGSP 63

Query: 66  GGKA-----VPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL--RDKSFARISDTDWQL 118
              +     V     V     +V T +   G++DI+  N G+L     S     + D++ 
Sbjct: 64  DVISFVHCDVTKDEDV---RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR 120

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN-YSAAKMALVGLSNT 177
           V D+++ GAF V++ A   M     G +V TAS S      G ++ Y+A K A++GL+ +
Sbjct: 121 VMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTS 180

Query: 178 LSIEGEKNNIHCNVIVP 194
           L  E  +  I  N + P
Sbjct: 181 LCTELGEYGIRVNCVSP 197

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  147 bits (373), Expect = 1e-43
 Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 24/198 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G+  ++TG  +G+GR+ ++  A+ GA++ +  L  + D        A+     +  +
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD--------ANETKQYVEKE 95

Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDW 116
           G K V     ++ GD         IVQ  +   G ++I++NN       +    I+    
Sbjct: 96  GVKCV-----LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL 150

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +    +++   F V++AA  H+K+     ++ TAS     GN    +YSA K A+V  + 
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKGAIVAFTR 208

Query: 177 TLSIEGEKNNIHCNVIVP 194
           +LS    +  I  N + P
Sbjct: 209 SLSQSLVQKGIRVNGVAP 226

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  143 bits (362), Expect = 5e-42
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 23/198 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   R A+VTG  +G+GR+ A+  A  GA V +N L  + +        A  V A I   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEED-------AQQVKALIEEC 98

Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDW 116
           G KAV     ++ GD         +V  A E  G +DI+   AG          ++   +
Sbjct: 99  GRKAV-----LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQF 153

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           Q    V++   F +++ A P + K     ++ T+S      +    +Y+A K A++  S 
Sbjct: 154 QQTFAVNVFALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATKAAILNYSR 211

Query: 177 TLSIEGEKNNIHCNVIVP 194
            L+ +  +  I  N++ P
Sbjct: 212 GLAKQVAEKGIRVNIVAP 229

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  139 bits (353), Expect = 3e-41
 Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 19/192 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             + R  +V G    LG         R   V   D+    +              E    
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTE---- 59

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAG-ILRDKSFARISDTDWQLVQDVHL 124
                       D        L    ++D ++  AG      + ++    +  L+    +
Sbjct: 60  ----------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI 109

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE--G 182
             +   S  A  H+K+   G L +  + + L G  G   Y  AK A+  L  +L+ +  G
Sbjct: 110 WTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSG 167

Query: 183 EKNNIHCNVIVP 194
             +      ++P
Sbjct: 168 MPSGAAAIAVLP 179

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  139 bits (352), Expect = 4e-41
 Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 16/190 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               ++A+VTGA  G+G      L+       +          G++ +    +      +
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL----------GRNPEHLAALAEIEGVE 51

Query: 66  GGKA-VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
             ++ +         +  V   L+N   +D +++ A + RD +    S  +W    D+++
Sbjct: 52  PIESDIVKEVLE---EGGVD-KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNV 107

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
                +SR   P + +   G ++   S +G   + G   Y+A+K AL GL++    E   
Sbjct: 108 IVPAELSRQLLPAL-RAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEAN 166

Query: 185 NNIHCNVIVP 194
           N I  + + P
Sbjct: 167 NGIRVSTVSP 176

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  140 bits (354), Expect = 5e-41
 Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 24/199 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+  IVTGA  G+GR  A  LA+ GA VVV      R  +         VV+     
Sbjct: 25  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTA----RSKE-----TLQKVVSHCLEL 75

Query: 66  GGKAVPNYNSVVDGD--------KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           G  +       + G         + V  A +  G +D++I N       +         +
Sbjct: 76  GAASA----HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVR 131

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
              +V+      ++ AA P +K+ N G +V+ +S +G +     A YSA+K AL G  ++
Sbjct: 132 KSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSS 190

Query: 178 LSIE--GEKNNIHCNVIVP 194
           +  E    + N+   + V 
Sbjct: 191 IRKEYSVSRVNVSITLCVL 209

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  137 bits (347), Expect = 3e-40
 Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 31/205 (15%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +   RV IVTGA +GLG +   +LA+ GA+V+  DL            A +   AE+   
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDL---------KPPAGEEPAAEL--- 51

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFAR----ISDTD 115
           G         V N          +  A + FG +  ++N AG    +         +   
Sbjct: 52  GAAVRFRNADVTNEADATAA---LAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDS 108

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANYSAAKM 169
           +     V+L G F + R A   M +         G +V TAS +   G  GQA Y+A+K 
Sbjct: 109 FARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKG 168

Query: 170 ALVGLSNTLSIEGEKNNIHCNVIVP 194
            +  L+   + E  +  I    I P
Sbjct: 169 GVAALTLPAARELARFGIRVVTIAP 193

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  137 bits (347), Expect = 4e-40
 Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 33/207 (15%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G VA++TG  +GLG + A  L  +GAS V+ DL          +   +    ++   
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDL---------PNSGGEAQAKKL--- 56

Query: 66  GGKA------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDT----- 114
           G         V +   V      +  A   FGR+D+ +N AGI        +        
Sbjct: 57  GNNCVFAPADVTSEKDVQTA---LALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTL 113

Query: 115 -DWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSAA 167
            D+Q V DV+L G F V R     M +         G ++ TAS +   G  GQA YSA+
Sbjct: 114 EDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSAS 173

Query: 168 KMALVGLSNTLSIEGEKNNIHCNVIVP 194
           K  +VG++  ++ +     I    I P
Sbjct: 174 KGGIVGMTLPIARDLAPIGIRVMTIAP 200

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  137 bits (346), Expect = 8e-40
 Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 26/208 (12%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
           M    +F+G  AIV+G   GLG +    L   G  VV+ DL         +++    +  
Sbjct: 22  MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADL---------AAEKGKALAD 72

Query: 61  EIRSKGGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRD-----KSFARIS 112
           E+   G +A     +V   D +   ++ A +       V+ + G         +  +   
Sbjct: 73  EL---GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPAD 129

Query: 113 DTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSGLLGNFGQANYSA 166
              +    D++L G + V+R     +           G LV+TAS +G  G  GQ  Y+A
Sbjct: 130 MGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAA 189

Query: 167 AKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           AK  ++GL+   + +     I  N I P
Sbjct: 190 AKAGVIGLTIAAARDLSSAGIRVNTIAP 217

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  132 bits (333), Expect = 2e-38
 Identities = 32/191 (16%), Positives = 65/191 (34%), Gaps = 21/191 (10%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAAD-TVVAEIRSKG 66
                IV G    LG +      + G +V+  DL      D       +     + +S  
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSIL 61

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLT 125
            +                 +     ++D V   AG      + ++    +  L+    + 
Sbjct: 62  EQTA---------------SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVW 106

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE--GE 183
            +   ++ A  H+K    G L +T + + +        Y  AK A+  L+++L+ +  G 
Sbjct: 107 SSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGL 164

Query: 184 KNNIHCNVIVP 194
            +N     I+P
Sbjct: 165 PDNSAVLTIMP 175

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  128 bits (323), Expect = 1e-36
 Identities = 35/194 (18%), Positives = 66/194 (34%), Gaps = 23/194 (11%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA- 69
           V  +TG+ +G+G +   LLA  G +V+  D G               + A++ + GG+  
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRG------------QADIEADLSTPGGRET 50

Query: 70  -----VPNYNSVVDGD--KIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQ 120
                +     V+DG               + + +N  G+    D     +S        
Sbjct: 51  AVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAV 110

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
            V    A +   A  P ++    G        +   G      Y+ +K A+  L+    +
Sbjct: 111 IVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ-THLAYAGSKYAVTCLARRNVV 169

Query: 181 EGEKNNIHCNVIVP 194
           +     +  NV+ P
Sbjct: 170 DWAGRGVRLNVVAP 183

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  127 bits (321), Expect = 3e-36
 Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 25/201 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
                VA+VTG  +GLG +    L + GA VVV D+ G+             VVA++  +
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED------------VVADLGDR 53

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD-KSFAR---ISDTDWQLVQD 121
              A  +          +  A E  G + IV+N AG     +  +R    S   ++ + D
Sbjct: 54  ARFAAADVTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVD 112

Query: 122 VHLTGAFRVSRAAWPHMKK--------QNYGRLVMTASNSGLLGNFGQANYSAAKMALVG 173
           ++L G+F V R A   + K        +  G ++ TAS +   G  GQA YSA+K  +VG
Sbjct: 113 INLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVG 172

Query: 174 LSNTLSIEGEKNNIHCNVIVP 194
           ++  ++ +   + I    I P
Sbjct: 173 MTLPIARDLASHRIRVMTIAP 193

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  123 bits (311), Expect = 4e-35
 Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
               ++TGA  G+G + A LL  +G  V    L   RD           + AE+      
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVG---LMA-RDEK-----RLQALAAELEGALPL 55

Query: 69  A--VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              V          + V    E FG +  ++NNAG+   K    ++  +W+LV D +LTG
Sbjct: 56  PGDVREEGDW---ARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTG 112

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AF   R A P + ++  G +V   S +G     G A Y+A+K  L+GL+    ++  + N
Sbjct: 113 AFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREAN 172

Query: 187 IHCNVIVP 194
           +    ++P
Sbjct: 173 VRVVNVLP 180

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  123 bits (311), Expect = 4e-35
 Identities = 56/195 (28%), Positives = 81/195 (41%), Gaps = 29/195 (14%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A+VTG  +GLGR+ AL L  RG  VVV DL  +R+G+       D             
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDL--RREGEDLIYVEGD------------- 47

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFAR----ISDTDWQLVQDVHLT 125
           V     V      V  A E    +  V++ AG+   +             ++ V +V+L 
Sbjct: 48  VTREEDVRRA---VARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLL 103

Query: 126 GAFRVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           G F V R A   M++         G +V TAS +   G  GQA Y+A+K  +V L+   +
Sbjct: 104 GTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAA 163

Query: 180 IEGEKNNIHCNVIVP 194
            E     I    + P
Sbjct: 164 RELAGWGIRVVTVAP 178

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  123 bits (311), Expect = 5e-35
 Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G 66
           + +VA++TGA  G+G + A  LA  G ++    LG  R  D       + +  E+  + G
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALA---LGA-RSVD-----RLEKIAHELMQEQG 51

Query: 67  GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            +   ++  V   + +    +  LE FG +D+V+ NAG+   K    +S+ ++  + +V+
Sbjct: 52  VEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVN 111

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L G +R  +A    +K+     LV T+  S          Y + K A   L  T  IE  
Sbjct: 112 LLGVWRTLKAFLDSLKRTGGLALVTTSDVSA-RLIPYGGGYVSTKWAARALVRTFQIENP 170

Query: 184 KNNIHCNVIVP 194
             ++    + P
Sbjct: 171 --DVRFFELRP 179

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  125 bits (316), Expect = 5e-35
 Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 8/190 (4%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            ++ ++TGA +G GR  A  LA  G  V        RD  G+++   + +    R     
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVY----ASMRDIVGRNASNVEAIAGFARDNDVD 60

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                  V     +   +   +   GRID++I+NAG +        +   +  + D+++ 
Sbjct: 61  LRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVL 120

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAAKMALVGLSNTLSIEGEK 184
              RV+RAA PHM++Q +G L+  +S+S   G     A Y AAK A+  ++   + E  +
Sbjct: 121 STQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSR 180

Query: 185 NNIHCNVIVP 194
             I  ++IVP
Sbjct: 181 WGIETSIIVP 190

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  119 bits (301), Expect = 6e-34
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 21/183 (11%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
            ++TGA  GLG   A   A +G  ++   L G R        A   +  E+   G +A+P
Sbjct: 3   VLITGATGGLGG--AFARALKGHDLL---LSG-RRAG-----ALAELAREV---GARALP 48

Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVS 131
               + D  +  +  LE  G +D++++  G     S         + +   HL  A    
Sbjct: 49  A--DLADELE-AKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTA---- 101

Query: 132 RAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNV 191
                H + Q   R V   +    +   G A Y+AAK AL         E  +  +H  +
Sbjct: 102 AFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVL 161

Query: 192 IVP 194
           +  
Sbjct: 162 VRL 164

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  120 bits (302), Expect = 1e-33
 Identities = 40/211 (18%), Positives = 71/211 (33%), Gaps = 38/211 (18%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAE---RGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
                V ++TGA  G GR+ A  LA     G+ ++V+          +S      +  E+
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVS---------ARSESMLRQLKEEL 53

Query: 63  RSK--GGKAVPNYNSVVDGD--------KIVQTALENFG----RIDIVINNAGILRDKSF 108
            ++    K V     +   D        +++    E       +  ++INNA  L D S 
Sbjct: 54  GAQQPDLKVV-----LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSK 108

Query: 109 ARISDTD---WQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQAN 163
             ++  D         ++LT    ++       +        +V  +S   L    G   
Sbjct: 109 GFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGL 168

Query: 164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           Y A K A   L   L+ E    ++      P
Sbjct: 169 YCAGKAARDMLYQVLAAEEP--SVRVLSYAP 197

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  120 bits (303), Expect = 1e-33
 Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 12/177 (6%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
            +V ++TGA  G+G   A  L   GA ++   LG +R          + +  EIR  GG 
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKIL---LGARR------QARIEAIATEIRDAGGT 54

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           A+     V D   +    Q A++ +GRID+++NNAG++     A +   +W+ + DV++ 
Sbjct: 55  ALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIK 114

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           G      A  P M+ Q  G+++   S   L      A Y A K A+  +S+ L  E 
Sbjct: 115 GVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES 171

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  114 bits (288), Expect = 5e-32
 Identities = 23/188 (12%), Positives = 55/188 (29%), Gaps = 31/188 (16%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           +    ++ GA   LG +    L ++   +                + +  V  +I +   
Sbjct: 2   NAMKILLIGASGTLGSAVKERLEKKAEVITA-------------GRHSGDVTVDITNIDS 48

Query: 68  KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
                          ++   E  G++D +++  G         ++     +     L G 
Sbjct: 49  ---------------IKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQ 93

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
             +       +  +  G   +T            A+ + A  A+   + + +IE     I
Sbjct: 94  INLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIE-MPRGI 150

Query: 188 HCNVIVPT 195
             N + P 
Sbjct: 151 RINTVSPN 158

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  115 bits (289), Expect = 1e-31
 Identities = 32/213 (15%), Positives = 62/213 (29%), Gaps = 57/213 (26%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            + +++G   G+G +   +L   G  +V  D+                V+A++ +  G  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI------------RDAEVIADLSTAEG-- 47

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
                       I     +    +D ++  AG+                V  V+  GA  
Sbjct: 48  --------RKQAIADVLAKCSKGMDGLVLCAGLGP-------QTKVLGNVVSVNYFGATE 92

Query: 130 VSRAAWPHMKKQNYGRLVMTASNSGLL----------------------------GNFGQ 161
           +  A  P +KK +    V+ +S +                                  G 
Sbjct: 93  LMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
             Y+ +K AL       +    +  +  N I P
Sbjct: 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAP 185

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  113 bits (286), Expect = 2e-31
 Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 13/184 (7%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           + ++TGA +GLG   A L    G +     L G R           TV   + +  G   
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATY---LTG-RSES-----KLSTVTNCLSNNVGYRA 53

Query: 71  PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRV 130
            +   +    ++ Q   +       V+++AG               Q + + +L+ A  V
Sbjct: 54  RD---LASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINV 110

Query: 131 SRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCN 190
            R      K Q    +VM  S +       ++ Y A K A+ GL  ++ +E +   +   
Sbjct: 111 LRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKII 169

Query: 191 VIVP 194
            + P
Sbjct: 170 AVYP 173

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  111 bits (280), Expect = 3e-30
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 13/192 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VA++TGA +G+G + A  LA  GA+V    +  +R       +    +  E+ + 
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVA---IAARR------VEKLRALGDELTAA 54

Query: 66  GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G K       V D   +   V + +E  G +DI++NNAGI+          TDW  + D 
Sbjct: 55  GAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDT 114

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L G   ++RAA PH+ +   G +V  +S +G +     A Y A K  +   S TL  E 
Sbjct: 115 NLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEV 173

Query: 183 EKNNIHCNVIVP 194
            +  +   VI P
Sbjct: 174 TERGVRVVVIEP 185

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  111 bits (279), Expect = 6e-30
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 15/188 (7%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +V +VTGA +G GR+ A      G +V+    G  R          + +   + +   +A
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVI----GTARR--------TEALDDLVAAYPDRA 53

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                 V DG++I       L  +GR+D+++NNAG  +  +F   ++ + + + ++H+ G
Sbjct: 54  EAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFG 113

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
             R++RA  P M+++  G +V  +S  G L   G + YSA K AL  LS  L+ E     
Sbjct: 114 PARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFG 173

Query: 187 IHCNVIVP 194
           I   ++ P
Sbjct: 174 IKVLIVEP 181

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  105 bits (265), Expect = 8e-28
 Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 20/200 (10%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R+  R+A+VTGA  G+G + A  L ++G  VV    G  R          + + AE +S 
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVV----GCARTVG-----NIEELAAECKSA 79

Query: 66  G--GKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
           G  G  +P    + + + I             +DI INNAG+ R  +    S + W+ + 
Sbjct: 80  GYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMF 139

Query: 121 DVHLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSGLLG--NFGQANYSAAKMALVGLSN 176
           +V++      +R A+  MK++N   G ++   S SG           YSA K A+  L+ 
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE 199

Query: 177 TLSIE--GEKNNIHCNVIVP 194
            L  E    + +I    I P
Sbjct: 200 GLRQELREAQTHIRATCISP 219

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  104 bits (261), Expect = 2e-27
 Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 16/191 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG--DGKSSKAADTVVAEIR 63
               ++ ++TGA +G+G + A   +E G  ++   L  +R       +         ++ 
Sbjct: 13  GSMKKLVVITGASSGIGEAIARRFSEEGHPLL---LLARRVERLKALNLPNTLCAQVDVT 69

Query: 64  SKGGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            K              D  +  A + +G  D ++NNAG++           +WQ + DV+
Sbjct: 70  DK--YTF---------DTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVN 118

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           + G     +A    MK +N G ++  +S +G       A Y   K A+  +S  +  E  
Sbjct: 119 VLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA 178

Query: 184 KNNIHCNVIVP 194
            +N+    I P
Sbjct: 179 ASNVRVMTIAP 189

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  103 bits (258), Expect = 4e-27
 Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 16/188 (8%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           + +VTGA AG G        ++G  V+     G+R       +    +  E+   G    
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVI---ATGRR------QERLQELKDEL---GDNLY 49

Query: 71  PNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDT-DWQLVQDVHLTG 126
                V +   I   + +    +  IDI++NNAG+      A  +   DW+ + D +  G
Sbjct: 50  IAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKG 109

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
              ++RA  P M ++N+G ++   S +G     G   Y A K  +   S  L  +     
Sbjct: 110 LVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 187 IHCNVIVP 194
           +    I P
Sbjct: 170 VRVTDIEP 177

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  101 bits (255), Expect = 2e-26
 Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 15/191 (7%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
                +TGA +G G + A   AE G S+V   L G+R       +    +  E+ S   +
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLV---LTGRR------EERLQALAGEL-SAKTR 70

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDT-DWQLVQDVHL 124
            +P    V D   +   V    E F  +  +INNAG+      A+  D  DW  + D ++
Sbjct: 71  VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNI 130

Query: 125 TGAFRVSRAAWPHMKKQNYGR-LVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
            G    +R   P +     G  +V   S +G     G   Y   K  +   S  L  + +
Sbjct: 131 KGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQ 190

Query: 184 KNNIHCNVIVP 194
              +    + P
Sbjct: 191 GTGVRVTNLEP 201

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  101 bits (254), Expect = 3e-26
 Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 18/198 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERG---ASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
           R   +  ++TGA AG+G++ AL   E       ++   L  +R       +  + +   I
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLI---LAARR------LEKLEELKKTI 80

Query: 63  RSK--GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDT-DW 116
             +    K       +   +KI   ++   + F  IDI++NNAG            T D 
Sbjct: 81  DQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDI 140

Query: 117 QLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           Q V D ++T    +++A  P  + +N G +V   S +G       + Y A+K A+   ++
Sbjct: 141 QDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTD 200

Query: 177 TLSIEGEKNNIHCNVIVP 194
           +L  E     I   +I P
Sbjct: 201 SLRKELINTKIRVILIAP 218

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 97.5 bits (243), Expect = 2e-24
 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 16/192 (8%)

Query: 10  RVAIVTGAGAGLGRSYALLLAE---RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            V ++TG  +G+G   A+ LA    +   V        RD   +                
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVY----ATLRDLKTQGRLWEAARALACPPGS 58

Query: 67  GKAVP----NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
            + +     +  SV       +   E  GR+D+++ NAG+        + +     V DV
Sbjct: 59  LETLQLDVRDSKSVAAA---RERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDV 113

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++ G  R+ +A  P MK++  GR+++T S  GL+G      Y A+K AL GL  +L++  
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

Query: 183 EKNNIHCNVIVP 194
               +H ++I  
Sbjct: 174 LPFGVHLSLIEC 185

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 81.6 bits (202), Expect = 7e-19
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 21/175 (12%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              VA+VTG   G+G +    L       VV+      RD            V +++++G
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVL----TARD-----VTRGQAAVQQLQAEG 53

Query: 67  GKAVP------NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ 120
                      +  S+     +     + +G +D+++NNAGI    +         ++  
Sbjct: 54  LSPRFHQLDIDDLQSI---RALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTM 110

Query: 121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
             +  G   V     P +K Q  GR+V  +S   +      +     K     ++
Sbjct: 111 KTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETIT 163

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 81.5 bits (201), Expect = 1e-18
 Identities = 37/213 (17%), Positives = 69/213 (32%), Gaps = 47/213 (22%)

Query: 1   MPE---QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADT 57
           MPE         R A+VTG   G+G      L+  G  VV+      RD           
Sbjct: 1   MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVL----TCRD-----VTKGHE 51

Query: 58  VVAEIRSKGGKAV-PNYNSVVDGDKIVQTA----LENFGRIDIVINNAGI---------- 102
            V ++++   + V  +   V D    + +       +FG++DI++NNAG+          
Sbjct: 52  AVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRF 111

Query: 103 --------------------LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN 142
                                  +     +    +    ++  G   V+    P ++  +
Sbjct: 112 KAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD 171

Query: 143 YGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
             R+V  +S++G L                 L+
Sbjct: 172 SPRIVNVSSSTGSLKYVSNETALEILGDGDALT 204

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 75.1 bits (185), Expect = 1e-16
 Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 36/210 (17%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
              +VTGA  G+G      L +      +  +   RD +  +       +  I+      
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHI--IATARDVEKATE------LKSIKDSRVHV 55

Query: 70  VP----NYNSVVDGDKIVQTALENFGR--IDIVINNAGILRDK-SFARISDTDWQLVQDV 122
           +P       S+   D  V    E  G   + ++INNAG+L    +    +        DV
Sbjct: 56  LPLTVTCDKSL---DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112

Query: 123 HLTGAFRVSRAAWPHMKK-----------QNYGRLVMTAS-------NSGLLGNFGQANY 164
           + T    +++   P +K             +   ++  +S       N+     F    Y
Sbjct: 113 NTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY 172

Query: 165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVP 194
             +K A+     TL+++ + +N+      P
Sbjct: 173 RMSKAAINMFGRTLAVDLKDDNVLVVNFCP 202

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 29/206 (14%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
              ++TG   GLG      L               R+ +          + ++       
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHL-FTTCRNREQAKE------LEDLAKNHSNI 74

Query: 70  ------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDV 122
                 + N+++       ++   ++   ++++ NNAGI  +      +   +       
Sbjct: 75  HILEIDLRNFDAYDKLVADIEGVTKD-QGLNVLFNNAGIAPKSARITAVRSQELLDTLQT 133

Query: 123 HLTGAFRVSRAAWPHMKK-----------QNYGRLVMTASNSGLLGNFGQAN---YSAAK 168
           +      +++A  P +KK                ++  +S  G +          Y  +K
Sbjct: 134 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK 193

Query: 169 MALVGLSNTLSIEGEKNNIHCNVIVP 194
            AL   + +LS++     I C  + P
Sbjct: 194 SALNAATKSLSVDLYPQRIMCVSLHP 219

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 63.0 bits (154), Expect = 4e-12
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 21/99 (21%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             R  ++TGA +GLG   A  LA RGA+V++      RD   K   AA T+  ++     
Sbjct: 15  AQRTVVITGANSGLGAVTARELARRGATVIM----AVRDTR-KGEAAARTMAGQVE---- 65

Query: 68  KAVPNYNSVVDGD----KIVQTALENFGRIDIVINNAGI 102
                   V + D      V+   +     D++INNAGI
Sbjct: 66  --------VRELDLQDLSSVRRFADGVSGADVLINNAGI 96

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 15/177 (8%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYAL-LLAERGASVVVNDLGGQRDGDGKSSKAADTVV 59
           MP      G V +  G G  LG   A  L+ ERG   +V  L  +R   G ++  A  +V
Sbjct: 523 MPPVWDAAGTVLVTGGTG-ALGAEVARHLVIERGVRNLV--LVSRR---GPAASGAAELV 576

Query: 60  AEIRSKGGKAVPNYNSVVDGDKIVQ--TALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           A++ + G +       V D + + +   ++ +   +  V++ AG+L D     ++     
Sbjct: 577 AQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLD 636

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            V    + GA  +     P +       LV+ +S SG+LG+ GQ NY+AA   L  L
Sbjct: 637 QVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANSFLDAL 687

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 61.4 bits (149), Expect = 2e-11
 Identities = 28/169 (16%), Positives = 45/169 (26%), Gaps = 20/169 (11%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+ A+V      +G   A LLA  GA VV+      R  D      A      +  + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCG----RKLD-----KAQAAADSVNKRF 167

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              V    +  +       A E       V     I        +    WQ    + +  
Sbjct: 168 KVNV----TAAETADDASRA-EAVKGAHFVFTAGAI----GLELLPQAAWQNESSIEIVA 218

Query: 127 AFR-VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            +          +   + G+        G LG  G       +  +  L
Sbjct: 219 DYNAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKL 266

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 54.9 bits (132), Expect = 5e-09
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 18/173 (10%)

Query: 8    DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
                 ++TG   G G   A  L  RGA  +V  L  +    G  +      V E R +G 
Sbjct: 1884 HKSY-VITGGLGGFGLQLAQWLRLRGAQKLV--LTSRS---GIRTGYQARQVREWRRQGV 1937

Query: 68   KAVPNYNSVVDGDKIVQTALENF---GRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
            + + + ++    D   ++ +      G +  V N A +LRD      +   +Q V     
Sbjct: 1938 QVLVSTSNASSLDG-ARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKY 1996

Query: 125  TGAF---RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGL 174
            +G     RV+R A P +        V+ +S S   GN GQANY  A  A+  +
Sbjct: 1997 SGTANLDRVTREACPELD-----YFVIFSSVSCGRGNAGQANYGFANSAMERI 2044

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 23/173 (13%)

Query: 1   MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVA 60
                +  G V ++TG    +GR  A  LA  GA  +V  L  +R   G  +  A  +  
Sbjct: 252 GAASWQPSGTV-LITGGMGAIGRRLARRLAAEGAERLV--LTSRR---GPEAPGAAELAE 305

Query: 61  EIRSKGGKAVPNYNSVVDGDKIVQTALENF---GRIDIVINNAGILRDKSFARISDTDWQ 117
           E+R  G + V         D   + AL         + V + AGIL D   A I     +
Sbjct: 306 ELRGHGCEVV-----HAACDVAERDALAALVTAYPPNAVFHTAGILDD---AVIDTLSPE 357

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRL---VMTASNSGLLGNFGQANYSAA 167
             + V      +V  A   H    +   L   V+ +S +G  GN GQ  Y+AA
Sbjct: 358 SFETVR---GAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAA 407

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 41/183 (22%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
            ++    G V +VTG   G+G   A  LAE+GA+ +V  L  +R   G  +  A  + AE
Sbjct: 233 GKRPPVHGSV-LVTGGTGGIGGRVARRLAEQGAAHLV--LTSRR---GADAPGAAELRAE 286

Query: 62  IRSKGGKAVPNYNSVVDGDKIVQTALENF-------GRIDIVINNAGILRDKSFARISDT 114
           +   G +       +   D   + AL            +  V ++AG+  D   A ++D 
Sbjct: 287 LEQLGVRVT-----IAACDAADREALAALLAELPEDAPLTAVFHSAGVAHD--DAPVADL 339

Query: 115 DWQLVQDVHLTGAFRV-SRAAWPHMKKQNYGRL---------VMTASNSGLLGNFGQANY 164
                    L    R    AA       +   L         V+ +S + + G+ GQ  Y
Sbjct: 340 TLG-----QLDALMRAKLTAAR------HLHELTADLDLDAFVLFSSGAAVWGSGGQPGY 388

Query: 165 SAA 167
           +AA
Sbjct: 389 AAA 391

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 37/183 (20%), Positives = 58/183 (31%), Gaps = 26/183 (14%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVV------NDLGGQRDGDGKSSKAA 55
               + DG V +VTGA        A  LA  GA  ++         G +           
Sbjct: 245 SPWWQADGTV-LVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGL 303

Query: 56  DTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF-------GRIDIVINNAGILRDKSF 108
             +VAE+   G  A     +VV  D     A             +  V++    +     
Sbjct: 304 AGLVAELADLGATA-----TVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDS--- 355

Query: 109 ARISDTDWQLVQDVH---LTGAFRVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQANY 164
             ++ TD   +  V     T A  + R              LV+ +S + + G  GQ  Y
Sbjct: 356 EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAY 415

Query: 165 SAA 167
           +A 
Sbjct: 416 AAG 418

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 45.5 bits (108), Expect = 5e-06
 Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 42/183 (22%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
            ++ +  G V +VTG   G+G   A  LA RGA  ++  L  +    G  +  A  +VAE
Sbjct: 220 DDEWKPTGTV-LVTGGTGGVGGQIARWLARRGAPHLL--LVSRS---GPDADGAGELVAE 273

Query: 62  IRSKGGKAVPNYNSVVDGDKIVQTALEN-FGRIDI------VINNAGILRDKSFARISDT 114
           + + G +       V   D   + ++    G I        V + A  L D     +   
Sbjct: 274 LEALGARTT-----VAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDD---GTVDTL 325

Query: 115 DWQLVQDVHLTGAFRV-SRAAWPHMKKQNYGRL---------VMTASNSGLLGNFGQANY 164
             +      +  A R     A       N   L         V+ +S +   G  G   Y
Sbjct: 326 TGE-----RIERASRAKVLGAR------NLHELTRELDLTAFVLFSSFASAFGAPGLGGY 374

Query: 165 SAA 167
           +  
Sbjct: 375 APG 377

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 47/206 (22%)

Query: 5   VRFDGRVAIVTGAGAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           V F  +  ++TGAG G +G      L + GA VVV            +S+ +  V    +
Sbjct: 472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVT-----------TSRFSKQVTDYYQ 520

Query: 64  -------SKGGK--AVP-NYNSVVDGDKIVQ-----TALENFG-RIDIVINNAGILRDKS 107
                  +KG     VP N  S  D + +++           G  +D +I  A I     
Sbjct: 521 SIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGI 580

Query: 108 FARISDTDWQ--LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS---------NSGLL 156
              +   D +      + LT   R+       +KKQ   R + T           N G  
Sbjct: 581 --ELEHIDSKSEFAHRIMLTNILRM----MGCVKKQKSARGIETRPAQVILPMSPNHGTF 634

Query: 157 GNFGQANYSAAKMALVGLSNTLSIEG 182
           G  G   YS +K++L  L N    E 
Sbjct: 635 GGDG--MYSESKLSLETLFNRWHSES 658

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 1e-04
 Identities = 32/210 (15%), Positives = 60/210 (28%), Gaps = 68/210 (32%)

Query: 26  ALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYN----SV--VDG 79
           ALL      +V+++ + G     GK+  A D       S   +   ++     ++   + 
Sbjct: 143 ALLELRPAKNVLIDGVLGS----GKTWVALDVC----LSYKVQCKMDFKIFWLNLKNCNS 194

Query: 80  DKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHM 138
            + V   L+    +ID    N     D S           +Q         + R     +
Sbjct: 195 PETVLEMLQKLLYQID---PNWTSRSDHSSNIKLRIHS--IQA-------ELRR----LL 238

Query: 139 KKQNYGR--LVM-TASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPT 195
           K + Y    LV+    N+     F                          N+ C +++ T
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAF--------------------------NLSCKILLTT 272

Query: 196 AASRLTEDILPPGSY-------PVKGFDPP 218
              ++T D L   +              P 
Sbjct: 273 RFKQVT-DFLSAATTTHISLDHHSMTLTPD 301

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.89
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.88
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.86
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.86
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.86
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.86
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.86
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.86
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.86
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.85
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.85
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.85
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.85
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.85
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.84
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.84
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.84
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.84
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.84
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.83
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.83
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.83
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.83
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.83
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.83
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.83
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.83
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.82
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.82
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.81
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.81
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.81
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.81
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.8
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.8
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.8
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.8
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.8
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.8
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.79
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.79
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.79
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.78
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.78
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.77
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.77
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.77
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.76
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.76
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.76
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.75
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.73
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.73
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.72
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.72
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.68
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.68
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.66
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.65
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.63
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.62
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.62
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.61
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.59
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.59
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.57
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.54
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.5
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.48
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.47
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.46
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.45
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.4
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.27
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.24
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.21
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.14
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.8
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.8
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.68
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.68
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.61
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.59
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.54
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.51
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.51
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.49
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.47
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.42
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.42
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.38
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.37
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.33
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.32
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.31
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.29
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.29
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.27
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.27
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.24
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.23
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.23
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.22
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.21
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.2
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.19
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.17
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.16
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.16
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.08
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.02
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.96
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.95
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.94
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.93
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.91
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.9
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.88
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.87
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.87
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.86
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.85
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.83
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.81
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.7
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.69
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.67
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.63
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.59
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.58
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.57
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.57
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.56
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.49
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.49
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.48
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.47
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.44
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.44
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.43
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.41
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.39
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.39
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.38
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.37
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.35
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.35
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.32
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.31
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.31
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.3
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.29
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.28
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.26
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.26
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.25
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.24
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.24
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.24
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.24
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.23
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.23
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.21
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.2
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.19
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.18
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.18
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.16
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.16
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.14
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.11
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.09
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.09
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.08
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.07
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.97
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.93
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.92
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.9
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.86
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.83
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.83
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.81
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.74
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.73
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.73
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.69
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.68
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.67
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.66
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.66
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.65
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.61
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.54
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.52
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.51
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.5
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.49
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.46
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.45
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.39
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.33
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.32
2l82_A	162	Designed protein OR32; structural genomics, northe	96.31
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.27
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.24
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.22
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.16
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.15
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.09
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.03
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.0
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.94
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.92
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.91
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.88
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.88
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.88
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.86
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.84
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.83
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.81
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.8
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.8
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.79
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.79
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.77
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.76
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.73
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.71
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.69
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.69
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.68
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.66
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.64
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.63
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.62
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.62
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.61
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.61
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.6
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.59
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.58
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.55
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.55
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.53
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.53
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.52
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.5
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.5
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.49
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.48

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.6e-48  Score=304.83  Aligned_cols=193  Identities=33%  Similarity=0.496  Sum_probs=179.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   81 (223)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++++.+...   .+|++|.+++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~---------~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~   73 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVEL---------LEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEE   73 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            3789999999999999999999999999999999988         8888888889998776644   569999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.++||++|+||||||+.. ..++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||.++..+.++
T Consensus        74 ~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~  153 (254)
T 4fn4_A           74 FVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA  153 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS
T ss_pred             HHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC
Confidence            99999999999999999999765 47899999999999999999999999999999999988899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++......
T Consensus       154 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~  200 (254)
T 4fn4_A          154 GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSK  200 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccC
Confidence            9999999999999999999999999999999999999 887765544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1e-48  Score=306.09  Aligned_cols=197  Identities=29%  Similarity=0.369  Sum_probs=180.7

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   77 (223)
                      |...++|+||++|||||++|||+++|+.|+++|++|++++|         +++.+++..+++.+.+...   .+|++|.+
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~---------~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~   71 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDI---------RATLLAESVDTLTRKGYDAHGVAFDVTDEL   71 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS---------CHHHHHHHHHHHHHTTCCEEECCCCTTCHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEeeCCCHH
Confidence            66667899999999999999999999999999999999987         7888888888888776543   56888899


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLL  156 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~  156 (223)
                      +++++++++.++||++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|.++ +.|+||++||..+..
T Consensus        72 ~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~  151 (255)
T 4g81_D           72 AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA  151 (255)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC
Confidence            9999999999999999999999999988999999999999999999999999999999999754 569999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++......
T Consensus       152 ~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~  202 (255)
T 4g81_D          152 ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE  202 (255)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC
Confidence            99999999999999999999999999999999999999999 888766543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.4e-47  Score=300.92  Aligned_cols=190  Identities=21%  Similarity=0.338  Sum_probs=171.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +.+.+++..+++......+.+|++|.+++++++++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r---------~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   96 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGR---------RKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEK   96 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHH
Confidence            489999999999999999999999999999999988         77778777777755555667899999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++||+||+||||||.....++.+.+.++|++++++|+.++++++|.++|+|++.  |+||++||..+..+.++..+|+
T Consensus        97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~  174 (273)
T 4fgs_A           97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYA  174 (273)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHH
Confidence            99999999999999999888999999999999999999999999999999999764  8999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +||+|+.+|+|+|+.|++++|||||+|+||+| |+++.+...
T Consensus       175 asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~  216 (273)
T 4fgs_A          175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG  216 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--------
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc
Confidence            99999999999999999999999999999999 888776654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6.3e-46  Score=291.39  Aligned_cols=191  Identities=20%  Similarity=0.320  Sum_probs=165.0

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccch
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDG   79 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   79 (223)
                      |+++|+||++|||||++|||+++|+.|+++|++|++++|+         .+..+ ..+++.+.+.   .+.+|++|.+++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~---------~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v   70 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARH---------APDGA-FLDALAQRQPRATYLPVELQDDAQC   70 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---------CCCHH-HHHHHHHHCTTCEEEECCTTCHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---------cccHH-HHHHHHhcCCCEEEEEeecCCHHHH
Confidence            3578999999999999999999999999999999999983         22221 2233444333   346699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++++++.++||++|+||||||+.... ..+.+.++|++.+++|+.+++.++|.++|+|++++ |+||++||..+..+.+
T Consensus        71 ~~~v~~~~~~~G~iDiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~  148 (258)
T 4gkb_A           71 RDAVAQTIATFGRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQG  148 (258)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCS
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCC
Confidence            999999999999999999999986544 45789999999999999999999999999998765 9999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++..+..
T Consensus       149 ~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  195 (258)
T 4gkb_A          149 NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWI  195 (258)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC----
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhh
Confidence            99999999999999999999999999999999999999 88887664

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8.5e-47  Score=292.79  Aligned_cols=190  Identities=31%  Similarity=0.451  Sum_probs=163.8

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   77 (223)
                      |.-.++|+||++|||||++|||+++|+.|+++|++|++++|+         ..  ++..+++.+.+...   .+|++|..
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~---------~~--~~~~~~~~~~g~~~~~~~~Dv~d~~   69 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARR---------AP--DETLDIIAKDGGNASALLIDFADPL   69 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---------CC--HHHHHHHHHTTCCEEEEECCTTSTT
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCC---------cH--HHHHHHHHHhCCcEEEEEccCCCHH
Confidence            555578999999999999999999999999999999999872         21  23445566655544   45777766


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLL  156 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~  156 (223)
                      +++..+     +++++|+||||||+....++.+.+.++|++++++|+.++|.++|.++|+|.++ +.|+||++||..+..
T Consensus        70 ~v~~~~-----~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~  144 (247)
T 4hp8_A           70 AAKDSF-----TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ  144 (247)
T ss_dssp             TTTTSS-----TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred             HHHHHH-----HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC
Confidence            665544     35899999999999988999999999999999999999999999999999866 469999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++.+....
T Consensus       145 g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~  195 (247)
T 4hp8_A          145 GGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRA  195 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhccc
Confidence            99999999999999999999999999999999999999999 888765543

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=8.5e-45  Score=282.69  Aligned_cols=185  Identities=23%  Similarity=0.323  Sum_probs=163.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +|++|||||++|||+++|+.|+++|++|++++|         +++..++..++.. ....+.+|++|.++++++++++.+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~---------~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~v~~~~~   71 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---------DEKRSADFAKERP-NLFYFHGDVADPLTLKKFVEYAME   71 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHTTCT-TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhcC-CEEEEEecCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999988         5555444332211 122346799999999999999999


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      +||++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++ |+||++||..+..+.++..+|++||
T Consensus        72 ~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asK  150 (247)
T 3ged_A           72 KLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAK  150 (247)
T ss_dssp             HHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHH
Confidence            999999999999999889999999999999999999999999999999998765 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +|+.+|+|+||.|+++ |||||+|+||+| |++.++..
T Consensus       151 aal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~  187 (247)
T 3ged_A          151 GGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT  187 (247)
T ss_dssp             HHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CC
T ss_pred             HHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH
Confidence            9999999999999997 999999999999 77665443

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1e-44  Score=285.29  Aligned_cols=187  Identities=21%  Similarity=0.276  Sum_probs=166.4

Q ss_pred             CCCc-cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccch
Q psy16220          1 MPEQ-VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDG   79 (223)
Q Consensus         1 m~~~-~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (223)
                      |.++ ++|+||++|||||++|||+++|+.|+++|++|++++|+..+.        ..        ....+.+|++|.+++
T Consensus         2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~--------~~~~~~~Dv~~~~~v   65 (261)
T 4h15_A            2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------LP--------EELFVEADLTTKEGC   65 (261)
T ss_dssp             CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------SC--------TTTEEECCTTSHHHH
T ss_pred             cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------CC--------cEEEEEcCCCCHHHH
Confidence            5555 489999999999999999999999999999999999843211        00        112457799999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +.+++++.++||++|+||||||...  ..++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||..+..+
T Consensus        66 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~  145 (261)
T 4h15_A           66 AIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP  145 (261)
T ss_dssp             HHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC
Confidence            9999999999999999999999754  35789999999999999999999999999999999988899999999999998


Q ss_pred             CC-CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        158 NF-GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ~~-~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+ +...|++||+|+.+|+|+|+.|++++|||||+|+||+| |++..+
T Consensus       146 ~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~  193 (261)
T 4h15_A          146 LPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVR  193 (261)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhh
Confidence            76 68899999999999999999999999999999999999 876543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.4e-44  Score=279.81  Aligned_cols=187  Identities=26%  Similarity=0.361  Sum_probs=153.3

Q ss_pred             CCCccc-cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccch
Q psy16220          1 MPEQVR-FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDG   79 (223)
Q Consensus         1 m~~~~~-~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (223)
                      |....+ |+||++|||||++|||+++|+.|+++|++|++++|+........            ......+.+|++|.+++
T Consensus         2 M~f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v   69 (242)
T 4b79_A            2 MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR------------HPRIRREELDITDSQRL   69 (242)
T ss_dssp             CCBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC------------CTTEEEEECCTTCHHHH
T ss_pred             CCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh------------cCCeEEEEecCCCHHHH
Confidence            443334 59999999999999999999999999999999998544322110            01122345566666555


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++    +.+++|++|+||||||+.  .++.+.+.++|++++++|+.+++.++|.++|+|++++ |+||++||..+..+.+
T Consensus        70 ~~----~~~~~g~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~  142 (242)
T 4b79_A           70 QR----LFEALPRLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSA  142 (242)
T ss_dssp             HH----HHHHCSCCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCS
T ss_pred             HH----HHHhcCCCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCC
Confidence            44    456789999999999975  4677899999999999999999999999999998765 9999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++......
T Consensus       143 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~  190 (242)
T 4b79_A          143 DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA  190 (242)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC
Confidence            99999999999999999999999999999999999999 888776554

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.1e-43  Score=276.94  Aligned_cols=194  Identities=32%  Similarity=0.568  Sum_probs=179.0

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      |..++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.++++
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   71 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTAT---------SESGAQAISDYLGDNGKGMALNVTNPESIE   71 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHGGGEEEEECCTTCHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcccceEEEEeCCCHHHHH
Confidence            67677899999999999999999999999999999999987         677777777777666566778999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        72 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  151 (248)
T 3op4_A           72 AVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG  151 (248)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC
Confidence            99999999999999999999998888889999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+|+++|+++|+.|++++||+||+|+||++ |++...
T Consensus       152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  195 (248)
T 3op4_A          152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA  195 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh
Confidence            9999999999999999999999999999999999999 776554

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.9e-42  Score=271.48  Aligned_cols=190  Identities=16%  Similarity=0.147  Sum_probs=168.2

Q ss_pred             cccCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccCCccc
Q psy16220          5 VRFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYNSVVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   78 (223)
                      ++|+||++|||||++  |||+++|+.|+++|++|++++|         ++...+++.+.+++.+.    .+.+|++|.++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   72 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYR---------KERSRKELEKLLEQLNQPEAHLYQIDVQSDEE   72 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEES---------SGGGHHHHHHHHGGGTCSSCEEEECCTTCHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCcEEEEEccCCCHHH
Confidence            689999999999865  9999999999999999999988         66666666666655433    34569999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      ++++++++.+++|++|+||||||+...    .++.+.+.++|+..+++|+.+++.+++.+.+++++.  |+||++||..+
T Consensus        73 v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~IVnisS~~~  150 (256)
T 4fs3_A           73 VINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG--GSIVATTYLGG  150 (256)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC--EEEEEEECGGG
T ss_pred             HHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CEEEEEecccc
Confidence            999999999999999999999997643    456788999999999999999999999998887654  89999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||++ |++.....
T Consensus       151 ~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  202 (256)
T 4fs3_A          151 EFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG  202 (256)
T ss_dssp             TSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             ccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc
Confidence            9999999999999999999999999999999999999999999 77766544

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.3e-42  Score=271.33  Aligned_cols=193  Identities=35%  Similarity=0.507  Sum_probs=175.6

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccch
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDG   79 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   79 (223)
                      .++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.+++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   76 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDL---------KSEGAEAVAAAIRQAGGKAIGLECNVTDEQHR   76 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEES---------SHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            356789999999999999999999999999999999988         677777777777765544   35688888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +.+++++.++++++|+||||||.....++ +.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.+
T Consensus        77 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  155 (256)
T 3gaf_A           77 EAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV  155 (256)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC
Confidence            99999999999999999999998877777 89999999999999999999999999999988889999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +...|++||+++++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  202 (256)
T 3gaf_A          156 RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL  202 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc
Confidence            99999999999999999999999999999999999999 87765543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.9e-41  Score=266.37  Aligned_cols=192  Identities=20%  Similarity=0.278  Sum_probs=165.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++++.+..   +.+|++|.+++++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   73 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRR---------NGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTA   73 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES---------SGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHH
Confidence            5688999999999999999999999999999999988         677777777777765543   4568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+. +++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.++.
T Consensus        74 ~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  152 (252)
T 3h7a_A           74 FLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF  152 (252)
T ss_dssp             HHHHHHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC
T ss_pred             HHHHHHhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC
Confidence            99999888 99999999999988888999999999999999999999999999999998888999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEE-EEEeCCCc-ccccccCCC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHC-NVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v-~~v~Pg~v-t~~~~~~~~  206 (223)
                      ..|++||+|+++|+++|+.|++++||+| |+|+||+| |++.....+
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~  199 (252)
T 3h7a_A          153 AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE  199 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch
Confidence            9999999999999999999999999999 99999999 877766543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-41  Score=268.89  Aligned_cols=192  Identities=28%  Similarity=0.446  Sum_probs=171.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +..|++|.++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~   93 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGR---------TRTEVEEVADEIVGAGGQAIALEADVSDELQMR   93 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH
Confidence            46788999999999999999999999999999999988         777777777777655443   356888889999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--c
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--G  157 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~--~  157 (223)
                      ++++++.++++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..  +
T Consensus        94 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~  173 (283)
T 3v8b_A           94 NAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT  173 (283)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC
Confidence            9999999999999999999998654 788999999999999999999999999999999988889999999999987  7


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .++...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          174 TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence            7899999999999999999999999999999999999999 8776654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.2e-41  Score=269.42  Aligned_cols=191  Identities=20%  Similarity=0.235  Sum_probs=175.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C----CccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G----GKAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~   79 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++... +    ..+.+|++|.+++
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   74 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR---------DGERLRAAESALRQRFPGARLFASVCDVLDALQV   74 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHH
Confidence            5789999999999999999999999999999999988         777777777777663 2    2235699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.+
T Consensus        75 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  154 (265)
T 3lf2_A           75 RAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP  154 (265)
T ss_dssp             HHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC
Confidence            99999999999999999999999888889999999999999999999999999999999988889999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  200 (265)
T 3lf2_A          155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRR  200 (265)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhh
Confidence            99999999999999999999999999999999999999 7776543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.7e-41  Score=268.14  Aligned_cols=191  Identities=30%  Similarity=0.389  Sum_probs=175.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .++++||++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.++++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~   91 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGT---------DPSRVAQTVQEFRNVGHDAEAVAFDVTSESEII   91 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS---------CHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            46789999999999999999999999999999999987         777777778888765543   356888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        92 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~  171 (271)
T 4ibo_A           92 EAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT  171 (271)
T ss_dssp             HHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT
T ss_pred             HHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC
Confidence            99999999999999999999998888899999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (271)
T 4ibo_A          172 VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQA  215 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhh
Confidence            9999999999999999999999999999999999999 776654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-41  Score=266.40  Aligned_cols=191  Identities=30%  Similarity=0.458  Sum_probs=174.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-C---ccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-G---KAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~   79 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+ .   .+.+|++|.+++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v   75 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGR---------STADIDACVADLDQLGSGKVIGVQTDVSDRAQC   75 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHH
Confidence            46789999999999999999999999999999999988         7777777777777654 2   245699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~  158 (223)
                      +++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+. .+.
T Consensus        76 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  155 (262)
T 3pk0_A           76 DALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY  155 (262)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC
Confidence            9999999999999999999999988888999999999999999999999999999999998888999999999986 788


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|++||+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       156 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  201 (262)
T 3pk0_A          156 PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE  201 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc
Confidence            999999999999999999999999999999999999999 776544

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.5e-41  Score=269.14  Aligned_cols=190  Identities=30%  Similarity=0.483  Sum_probs=173.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.+++++++
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV---------NEDAAVRVANEIGSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHH
Confidence            46788999999999999999999999999999999987         666666666655433344567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++...
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  172 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTA  172 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChh
Confidence            99999999999999999998888899999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |++||+|+++|+++|+.|++++||+||+|+||+| |++..
T Consensus       173 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  212 (277)
T 4dqx_A          173 YVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT  212 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhh
Confidence            9999999999999999999999999999999999 77633

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.5e-41  Score=266.18  Aligned_cols=189  Identities=32%  Similarity=0.463  Sum_probs=172.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +++||++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.+++++++++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   73 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDI---------NAEGAKAAAASIGKKARAIAADISDPGSVKALFAE   73 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS---------CHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence            688999999999999999999999999999999987         66666666666643344556799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+ .|+||++||..+..+.++...|
T Consensus        74 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (247)
T 3rwb_A           74 IQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAY  153 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHH
T ss_pred             HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhh
Confidence            999999999999999998888899999999999999999999999999999998865 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  193 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKA  193 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccc
Confidence            999999999999999999999999999999999 776554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.7e-41  Score=267.20  Aligned_cols=192  Identities=37%  Similarity=0.563  Sum_probs=175.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      +.++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|..+++
T Consensus        23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   93 (270)
T 3ftp_A           23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTAT---------TEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVD   93 (270)
T ss_dssp             CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHH
Confidence            45688999999999999999999999999999999988         677777777777665443   456888989999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      .+++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++
T Consensus        94 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  173 (270)
T 3ftp_A           94 ALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG  173 (270)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC
Confidence            99999999999999999999998888889999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  218 (270)
T 3ftp_A          174 QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL  218 (270)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc
Confidence            9999999999999999999999999999999999999 7766543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-40  Score=265.46  Aligned_cols=199  Identities=31%  Similarity=0.462  Sum_probs=174.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCC---CCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGD---GKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+......   ..+....++..+++...+..   +..|++|.+
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            456899999999999999999999999999999999985432211   11244555555666655443   356889999


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            99999999999999999999999998888899999999999999999999999999999999888899999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .++...|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  210 (281)
T 3s55_A          165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTH  210 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTS
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcccc
Confidence            9999999999999999999999999999999999999999 77764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4e-41  Score=266.48  Aligned_cols=192  Identities=23%  Similarity=0.323  Sum_probs=174.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCC---ccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGG---KAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~   79 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+ .+.   .+.+|++|.+++
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v   85 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGR---------DVSELDAARRALGEQFGTDVHTVAIDLAEPDAP   85 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            35689999999999999999999999999999999988         67777777777655 233   345699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~  158 (223)
                      +++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+ .|+||++||..+..+.
T Consensus        86 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  165 (266)
T 4egf_A           86 AELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL  165 (266)
T ss_dssp             HHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC
Confidence            999999999999999999999998888889999999999999999999999999999998765 5899999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       166 ~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  212 (266)
T 4egf_A          166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV  212 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh
Confidence            999999999999999999999999999999999999999 8776544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.1e-40  Score=260.42  Aligned_cols=193  Identities=27%  Similarity=0.422  Sum_probs=172.0

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----cccccc--CCcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNY--NSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~   77 (223)
                      ...+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.    .+..|+  +|..
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   77 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR---------NEEKLRQVASHINEETGRQPQWFILDLLTCTSE   77 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhcCCCceEEEEecccCCHH
Confidence            34589999999999999999999999999999999988         67777777777665432    345577  7888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      +++.+++++.+.++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..
T Consensus        78 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  157 (252)
T 3f1l_A           78 NCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ  157 (252)
T ss_dssp             HHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc
Confidence            88999999999999999999999986 44688899999999999999999999999999999988889999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +.++...|++||+++++|+++|+.|+++. |+||+|+||+| |++.....+
T Consensus       158 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~  207 (252)
T 3f1l_A          158 GRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFP  207 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCT
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCC
Confidence            99999999999999999999999999987 99999999999 877665443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=5.5e-41  Score=264.74  Aligned_cols=191  Identities=25%  Similarity=0.382  Sum_probs=173.0

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +.++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.+++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   73 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADI---------DIERARQAAAEIGPAAYAVQMDVTRQDSIDAAI   73 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHH
Confidence            34688999999999999999999999999999999987         666676666666444445667999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~  162 (223)
                      +++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++..
T Consensus        74 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  153 (259)
T 4e6p_A           74 AATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVA  153 (259)
T ss_dssp             HHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCCh
Confidence            99999999999999999998888889999999999999999999999999999998765 68999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|++||+++++|+++++.|++++||+||+|+||+| |++...
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  195 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG  195 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh
Confidence            99999999999999999999999999999999999 776543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.9e-41  Score=268.30  Aligned_cols=192  Identities=33%  Similarity=0.495  Sum_probs=162.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|..++++++
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   92 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGT---------REDKLKEIAADLGKDVFVFSANLSDRKSIKQLA   92 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceEEEEeecCCHHHHHHHH
Confidence            46789999999999999999999999999999999987         666666665555333334567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+..+.++...
T Consensus        93 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  172 (266)
T 3grp_A           93 EVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTN  172 (266)
T ss_dssp             HHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchh
Confidence            99999999999999999998888889999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       173 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  214 (266)
T 3grp_A          173 YCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL  214 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc
Confidence            9999999999999999999999999999999999 7766543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=7.4e-41  Score=262.69  Aligned_cols=191  Identities=22%  Similarity=0.311  Sum_probs=165.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC---C---ccccccCCccc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG---G---KAVPNYNSVVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~   78 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++....   .   .+.+|++|.++
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   73 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIAR---------SKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTK   73 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEES---------CHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHhccccCcceEEeccCCCHHH
Confidence            5688999999999999999999999999999999988         7777777777776542   1   24569999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++.+++++.++++++|+||||||.....++ +.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.
T Consensus        74 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  152 (250)
T 3nyw_A           74 ADTEIKDIHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF  152 (250)
T ss_dssp             HHHHHHHHHHHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC
Confidence            999999999999999999999999877777 7889999999999999999999999999998888999999999999977


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ++...|++||+|+++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       153 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  200 (250)
T 3nyw_A          153 ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG  200 (250)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC
Confidence            789999999999999999999999999999999999999 87776543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-41  Score=264.70  Aligned_cols=191  Identities=27%  Similarity=0.343  Sum_probs=159.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|+         ....++..+++......+..|++|.++++++++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   73 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLK---------PPAGEEPAAELGAAVRFRNADVTNEADATAALA   73 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS---------CC------------CEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---------hHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            57899999999999999999999999999999999883         333334444444444456679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CCCcEEEEecCcc
Q psy16220         85 TALENFGRIDIVINNAGILRDKSF----ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNSG  154 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~vsS~~~  154 (223)
                      ++.++++++|+||||||.....++    .+.+.++|++++++|+.+++.+++.++|+|+++      +.|+||++||..+
T Consensus        74 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tpc_A           74 FAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA  153 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence            999999999999999998765443    367899999999999999999999999999874      5689999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..+.++...|++||+++++|+++|+.|++++||+||+|+||+| |++....
T Consensus       154 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  204 (257)
T 3tpc_A          154 FDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM  204 (257)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----
T ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC
Confidence            9999999999999999999999999999999999999999999 7776554

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5.5e-41  Score=266.43  Aligned_cols=193  Identities=29%  Similarity=0.426  Sum_probs=165.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +.++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.+++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   93 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGR---------RLDALQETAAEIGDDALCVPTDVTDPDSVRALF   93 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHH
Confidence            44578999999999999999999999999999999988         666777766666544445677999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCcccccCCC
Q psy16220         84 QTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  160 (223)
                      +++.++++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|++.+  .|+||++||..+..+.++
T Consensus        94 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  173 (272)
T 4dyv_A           94 TATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY  173 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC
Confidence            9999999999999999998754 6888999999999999999999999999999998765  589999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ...|++||+++++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  219 (272)
T 4dyv_A          174 SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK  219 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence            9999999999999999999999999999999999999 77766543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-40  Score=263.64  Aligned_cols=199  Identities=34%  Similarity=0.510  Sum_probs=175.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCC----CCCChhhhhHHHHHHHHhCCc---cccccCCc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG----DGKSSKAADTVVAEIRSKGGK---AVPNYNSV   76 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   76 (223)
                      +.+++||++|||||++|||+++|++|+++|++|++++|......    ..++....++..+++...+..   +.+|++|.
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            45689999999999999999999999999999999998532211    123566677777777665543   34688888


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGL  155 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~  155 (223)
                      ++++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++ .|+||++||..+.
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence            899999999999999999999999998888889999999999999999999999999999998765 6899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+.++...|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       170 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  217 (280)
T 3pgx_A          170 KATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE  217 (280)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc
Confidence            999999999999999999999999999999999999999999 77654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.9e-40  Score=265.25  Aligned_cols=200  Identities=28%  Similarity=0.445  Sum_probs=174.1

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCC-------CCCCChhhhhHHHHHHHHhCCc---cccc
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRD-------GDGKSSKAADTVVAEIRSKGGK---AVPN   72 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~~~   72 (223)
                      ++.++++|++|||||++|||+++|++|+++|++|++++|+....       ...++.+.+++..+++...+..   +.+|
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            34568999999999999999999999999999999999863321       1133466666766677655443   3468


Q ss_pred             cCCccchHHHHHHHHHhcCCccEEEeccCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEe
Q psy16220         73 YNSVVDGDKIVQTALENFGRIDIVINNAGILRDK-SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTA  150 (223)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vs  150 (223)
                      ++|.++++++++++.++++++|+||||||..... ++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++|
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence            8888999999999999999999999999987665 488899999999999999999999999999998765 68999999


Q ss_pred             cCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        151 SNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       151 S~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |..+..+.++...|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  217 (286)
T 3uve_A          165 SVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH  217 (286)
T ss_dssp             CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred             chhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence            99999999999999999999999999999999999999999999999 87764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=9.9e-41  Score=264.94  Aligned_cols=190  Identities=24%  Similarity=0.363  Sum_probs=169.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +.++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.+++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   76 (271)
T 3tzq_B            6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADL---------PETDLAGAAASVGRGAVHHVVDLTNEVSVRALI   76 (271)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC---------TTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHH
Confidence            45688999999999999999999999999999999988         444455555555333344567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++.++++++|+||||||...  ..++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++.
T Consensus        77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  156 (271)
T 3tzq_B           77 DFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMS  156 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCC
Confidence            999999999999999999873  456778999999999999999999999999999998888999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          157 TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence            999999999999999999999999999999999999 77665

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.2e-41  Score=266.81  Aligned_cols=190  Identities=27%  Similarity=0.416  Sum_probs=172.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.++++.+++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   95 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADI---------DGDAADAAATKIGCGAAACRVDVSDEQQIIAMVD   95 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999987         6666666666663333445679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|
T Consensus        96 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y  175 (277)
T 3gvc_A           96 ACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAY  175 (277)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhH
Confidence            99999999999999999988888999999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++||+++++|+++++.|++++||+||+|+||+| |++...
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  215 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQT  215 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHH
Confidence            999999999999999999999999999999999 777654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-40  Score=262.85  Aligned_cols=199  Identities=26%  Similarity=0.433  Sum_probs=174.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCC----CCCCChhhhhHHHHHHHHhCCcc---ccccCCcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRD----GDGKSSKAADTVVAEIRSKGGKA---VPNYNSVV   77 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   77 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|+....    ...++....++..+++...+..+   .+|++|.+
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            468899999999999999999999999999999998853321    11235566666666666655443   45888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLL  156 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~  156 (223)
                      +++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||..+..
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            89999999999999999999999998888889999999999999999999999999999998765 68999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +.++...|++||+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       167 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          167 MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence            99999999999999999999999999999999999999999 877543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=4.6e-41  Score=264.59  Aligned_cols=188  Identities=24%  Similarity=0.318  Sum_probs=171.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++||++|||||++|||+++|++|+++|++|++++|         +....+++.+++......+..|++|..+++.+++
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGR---------NESNIARIREEFGPRVHALRSDIADLNEIAVLGA   74 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHH
Confidence            3689999999999999999999999999999999988         6667777666665555556779999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||.++..+.++...|
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y  152 (255)
T 4eso_A           75 AAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG--GSIVFTSSVADEGGHPGMSVY  152 (255)
T ss_dssp             HHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCGGGSSBCTTBHHH
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC--CEEEEECChhhcCCCCCchHH
Confidence            999999999999999999888889999999999999999999999999999998764  899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++||+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       153 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          153 SASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence            999999999999999999999999999999999 776543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.6e-40  Score=258.38  Aligned_cols=191  Identities=30%  Similarity=0.463  Sum_probs=171.2

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      ||.  ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.+
T Consensus         1 m~~--~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~   69 (247)
T 2jah_A            1 MPS--ALQGKVALITGASSGIGEATARALAAEGAAVAIAAR---------RVEKLRALGDELTAAGAKVHVLELDVADRQ   69 (247)
T ss_dssp             --C--TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             CCc--cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence            553  478999999999999999999999999999999988         666666777777654433   356888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++.+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+ |+||++||..+..+
T Consensus        70 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~  148 (247)
T 2jah_A           70 GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN  148 (247)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC
Confidence            89999999999999999999999988778888999999999999999999999999999998777 99999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++...|++||+++++|+++|+.|++++||+||+|+||++ |++...
T Consensus       149 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  195 (247)
T 2jah_A          149 VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH  195 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence            9999999999999999999999999999999999999999 777654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=7.2e-41  Score=260.48  Aligned_cols=187  Identities=21%  Similarity=0.230  Sum_probs=162.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.++++.+++++.
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   72 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGR---------RYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAV   72 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999988         6667777666664444445679999999999999999


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                      +.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++ ++||++||..+..+.++...|++|
T Consensus        73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~as  151 (235)
T 3l6e_A           73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCAS  151 (235)
T ss_dssp             HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHH
T ss_pred             HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHH
Confidence            9999999999999998878889999999999999999999999999999998765 699999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       152 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          152 KWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----
T ss_pred             HHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc
Confidence            999999999999999999999999999999 7776543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.7e-41  Score=268.05  Aligned_cols=197  Identities=20%  Similarity=0.258  Sum_probs=169.7

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      |+..+++++|++|||||++|||+++|++|+++|++|++++|.      .++....+++.+++...+..   +.+|++|.+
T Consensus         3 ~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~   76 (262)
T 3ksu_A            3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQ------AKDSDTANKLKDELEDQGAKVALYQSDLSNEE   76 (262)
T ss_dssp             -CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESC------GGGHHHHHHHHHHHHTTTCEEEEEECCCCSHH
T ss_pred             CccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC------ccCHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence            345678899999999999999999999999999999998772      23556677777777765543   356899999


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||..+..+
T Consensus        77 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~  154 (262)
T 3ksu_A           77 EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAY  154 (262)
T ss_dssp             HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccC
Confidence            999999999999999999999999988888999999999999999999999999999999944  389999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .++...|++||+|+++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  203 (262)
T 3ksu_A          155 TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE  203 (262)
T ss_dssp             HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC
Confidence            9999999999999999999999999999999999999999 87766543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6.2e-41  Score=264.17  Aligned_cols=189  Identities=27%  Similarity=0.348  Sum_probs=169.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   73 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGR---------TKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKM   73 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            578999999999999999999999999999999988         777777777777554433   45689999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHH-hcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK-KQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|. +.+.|+||++||..+..+.++.
T Consensus        74 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  153 (257)
T 3imf_A           74 IEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV  153 (257)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc
Confidence            999999999999999999988888899999999999999999999999999999994 4457999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhC-CCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGE-KNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|++||+|+++|+++|+.|++ ++||+||+|+||+| |++...
T Consensus       154 ~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          154 IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchh
Confidence            9999999999999999999997 77999999999999 765443

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-40  Score=261.94  Aligned_cols=188  Identities=28%  Similarity=0.434  Sum_probs=166.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.++++.++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   72 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGAR---------RQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFA   72 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999999999988         777777878888765543   346888888999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+..+.++...
T Consensus        73 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~  152 (264)
T 3tfo_A           73 QAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAV  152 (264)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChh
Confidence            99999999999999999998888899999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |++||+++++|+++|+.|+ + ||+||+|+||+| |++.....
T Consensus       153 Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~  193 (264)
T 3tfo_A          153 YCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTIT  193 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCccccccc
Confidence            9999999999999999998 5 999999999999 87766543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.4e-40  Score=265.42  Aligned_cols=192  Identities=22%  Similarity=0.263  Sum_probs=172.9

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC------ccccccCCc
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG------KAVPNYNSV   76 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~   76 (223)
                      +++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+.+.      .+..|++|.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~   75 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGR---------NPDKLAGAVQELEALGANGGAIRYEPTDITNE   75 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH
Confidence            456789999999999999999999999999999999988         77777777777776543      234689999


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCC-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      ++++++++++.+.++++|+||||||. ....++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+.
T Consensus        76 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  155 (281)
T 3svt_A           76 DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAAS  155 (281)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHc
Confidence            99999999999999999999999997 45578889999999999999999999999999999998888999999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+.++...|++||+++++|+++++.|++++||+||+|+||+| |++...
T Consensus       156 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          156 NTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             SCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence            999999999999999999999999999999999999999999 777654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-40  Score=261.38  Aligned_cols=190  Identities=23%  Similarity=0.338  Sum_probs=172.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      ...+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   76 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAAR---------TVERLEDVAKQVTDTGRRALSVGTDITDDAQVA   76 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence            34578999999999999999999999999999999988         777777777787765543   356888888999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++++++.++++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|.+++ |+||++||..+..+.+
T Consensus        77 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~  155 (264)
T 3ucx_A           77 HLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQA  155 (264)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCT
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCC
Confidence            99999999999999999999985 557888999999999999999999999999999998866 9999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|++||+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  200 (264)
T 3ucx_A          156 KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS  200 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHH
Confidence            99999999999999999999999999999999999999 776543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2e-40  Score=268.71  Aligned_cols=203  Identities=70%  Similarity=1.131  Sum_probs=180.4

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      |+..+++++|++|||||++|||+++|++|+++|++|++.++...+....++....+...+++...+.....|+.|..+++
T Consensus         1 M~~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~   80 (319)
T 1gz6_A            1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGE   80 (319)
T ss_dssp             --CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHH
T ss_pred             CCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHH
Confidence            77778899999999999999999999999999999999887544333345667777777788777666778999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.+.++++|+||||||.....++.+.+.++|+.++++|+.+++.+++.++|+|++.+.|+||++||.++..+.++
T Consensus        81 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           81 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            99999999999999999999988777788899999999999999999999999999999887799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCccccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~  203 (223)
                      ...|++||+++..|+++|+.|++++||+||+|+||++|++...
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~t~~~~~  203 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET  203 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCccccccc
Confidence            9999999999999999999999999999999999998665543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.6e-40  Score=259.91  Aligned_cols=189  Identities=25%  Similarity=0.322  Sum_probs=172.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      ++|++|||||++|||+++|++|+++|++|+++ +|         +....++..+++...+..   +..|++|.++++.++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR---------SKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMF   73 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---------CHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            58999999999999999999999999999997 55         667777777777665443   356888888999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++...
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  153 (258)
T 3oid_A           74 QQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTT  153 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHH
Confidence            99999999999999999988888899999999999999999999999999999999988899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |++||+++++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence            9999999999999999999999999999999999 77766543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.4e-40  Score=265.88  Aligned_cols=202  Identities=22%  Similarity=0.347  Sum_probs=172.1

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVD   78 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   78 (223)
                      |+.+++++|++|||||++|||+++|++|+++|++|++++|+..+...  ....+++..+++...+..   +.+|++|.++
T Consensus         2 p~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   79 (285)
T 3sc4_A            2 PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPK--LPGTIYTAAKEIEEAGGQALPIVGDIRDGDA   79 (285)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSS--SCCCHHHHHHHHHHHTSEEEEEECCTTSHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhh--hhHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            34577899999999999999999999999999999999996543221  112344455555554443   4568888899


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.
T Consensus        80 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           80 VAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence            99999999999999999999999988888999999999999999999999999999999998888999999999998886


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCC-Cc-ccccccCC
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPT-AA-SRLTEDIL  205 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg-~v-t~~~~~~~  205 (223)
                       ++...|++||+|+++|+++|+.|++++||+||+|+|| .+ |++..+..
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~  209 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLL  209 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhc
Confidence             7889999999999999999999999999999999999 57 76665543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.7e-40  Score=263.30  Aligned_cols=192  Identities=41%  Similarity=0.614  Sum_probs=172.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|.        +....++..+++...+..   +.+|++|.++++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~   94 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS--------SAGAADEVVAAIAAAGGEAFAVKADVSQESEVE   94 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--------ChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            356889999999999999999999999999999998762        445566666666655443   456899999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.++
T Consensus        95 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  174 (269)
T 4dmm_A           95 ALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG  174 (269)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC
Confidence            99999999999999999999998888889999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (269)
T 4dmm_A          175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE  218 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc
Confidence            9999999999999999999999999999999999999 776654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.7e-40  Score=266.20  Aligned_cols=192  Identities=27%  Similarity=0.420  Sum_probs=174.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-C---ccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-G---KAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~   79 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+.+ .   .+.+|++|.+++
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v  106 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAAR---------SPRELSSVTAELGELGAGNVIGVRLDVSDPGSC  106 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------SGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHH
Confidence            45789999999999999999999999999999999988         6666777777776544 2   245699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~  158 (223)
                      +++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+. .+.
T Consensus       107 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~  186 (293)
T 3rih_A          107 ADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY  186 (293)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC
Confidence            9999999999999999999999988888999999999999999999999999999999998888999999999986 888


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++...|++||+++++|+++|+.|++++||+||+|+||+| |++....
T Consensus       187 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  233 (293)
T 3rih_A          187 PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM  233 (293)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc
Confidence            999999999999999999999999999999999999999 7765543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=5.7e-40  Score=264.02  Aligned_cols=199  Identities=30%  Similarity=0.472  Sum_probs=174.5

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCC---CCCCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRD---GDGKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+....   ...++...+++..+++...+..   +.+|++|.+
T Consensus        23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD  102 (299)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence            3568899999999999999999999999999999999864322   1134466677777777765544   356888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGL  155 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~  155 (223)
                      +++++++++.+.++++|+||||||...... +.+.+.++|++++++|+.+++.+++.++|+|.+.+ .|+||++||.++.
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            899999999999999999999999876654 88999999999999999999999999999987754 6899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++..
T Consensus       183 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  230 (299)
T 3t7c_A          183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLL  230 (299)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence            999999999999999999999999999999999999999999 77764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-40  Score=264.26  Aligned_cols=193  Identities=28%  Similarity=0.481  Sum_probs=168.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~   80 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|+        +....+...+++... +.   .+..|++|.++++
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   92 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFG--------APDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIA   92 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCC--------CHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------ChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHH
Confidence            46789999999999999999999999999999999872        345556666666543 22   2356899999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        93 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  172 (281)
T 3v2h_A           93 DMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF  172 (281)
T ss_dssp             HHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC
Confidence            99999999999999999999998888889999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ...|++||+++++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~  218 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI  218 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhc
Confidence            9999999999999999999999999999999999999 87766544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-40  Score=264.89  Aligned_cols=191  Identities=29%  Similarity=0.449  Sum_probs=165.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   80 (223)
                      .+++||++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.    .+.+|++|.++++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   99 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGR---------RPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVA   99 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHH
Confidence            4578999999999999999999999999999999988         66667777777655432    3456999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCccccc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLG  157 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~  157 (223)
                      ++++++.++++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|++.+  .|+||++||..+..+
T Consensus       100 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~  179 (281)
T 4dry_A          100 ALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP  179 (281)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC
Confidence            9999999999999999999998754 7888999999999999999999999999999998764  689999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .++...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       180 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  227 (281)
T 4dry_A          180 RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM  227 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh
Confidence            9999999999999999999999999999999999999999 7776654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.7e-40  Score=262.08  Aligned_cols=190  Identities=33%  Similarity=0.496  Sum_probs=171.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .+++||++|||||++|||+++|++|+++|++|++++|         +....+++.+++...+..   +.+|++|.++++.
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   74 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTAR---------NGNALAELTDEIAGGGGEAAALAGDVGDEALHEA   74 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCS---------CHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            4688999999999999999999999999999999987         777777777777654443   3568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCC
Q psy16220         82 IVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNF  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~  159 (223)
                      +++++.++++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|.+.+.|+||++||..+. .+.+
T Consensus        75 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (280)
T 3tox_A           75 LVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFA  154 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCC
Confidence            9999999999999999999977 4478889999999999999999999999999999999888999999999988 7889


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          155 GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence            99999999999999999999999999999999999999 777655

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=3.6e-40  Score=258.21  Aligned_cols=190  Identities=36%  Similarity=0.572  Sum_probs=171.3

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      +.+|++|||||++|||+++|++|+++|++|+++++.        +....++..+++...+..   +..|++|.+++++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   73 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG--------SKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMI   73 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            357999999999999999999999999999998762        445666667777665443   456889999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++...
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  153 (246)
T 3osu_A           74 KEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQAN  153 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChH
Confidence            99999999999999999998888889999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |++||+++++|+++++.|++++||+||+|+||++ |++....
T Consensus       154 Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  195 (246)
T 3osu_A          154 YVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL  195 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc
Confidence            9999999999999999999999999999999999 7766543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.2e-41  Score=269.48  Aligned_cols=188  Identities=25%  Similarity=0.306  Sum_probs=169.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~   80 (223)
                      ..++||++|||||++|||+++|++|+++|++|++++|         +....++..+++... +.   .+.+|++|..+++
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASR---------SLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVM   93 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES---------CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence            3578999999999999999999999999999999988         666666666666432 22   3456999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.|+||++||..+..+.++
T Consensus        94 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  173 (277)
T 4fc7_A           94 AAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL  173 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC
Confidence            99999999999999999999988888889999999999999999999999999999998777799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ...|++||+|+++|+++|+.|++++||+||+|+||+| |++.
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          174 QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG  215 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchh
Confidence            9999999999999999999999999999999999999 6653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.6e-40  Score=261.06  Aligned_cols=195  Identities=28%  Similarity=0.427  Sum_probs=166.4

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      |..+++++|++|||||++|||+++|++|+++|++|++++|         +....+++.+++......+.+|++|.+++++
T Consensus         2 p~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (261)
T 3n74_A            2 PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR---------DKAGAERVAGEIGDAALAVAADISKEADVDA   72 (261)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCTTEEEEECCTTSHHHHHH
T ss_pred             CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHhCCceEEEEecCCCHHHHHH
Confidence            4457889999999999999999999999999999999988         6777777666665444556779999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCcEEEEecCcccc
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN----YGRLVMTASNSGLL  156 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~g~iv~vsS~~~~~  156 (223)
                      +++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|.+++    .++||++||..+..
T Consensus        73 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  152 (261)
T 3n74_A           73 AVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR  152 (261)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS
T ss_pred             HHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC
Confidence            99999999999999999999876 56778889999999999999999999999999998753    57899999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +.++...|+++|+++++|+++|+.|++++||+||+|+||++ |++.....
T Consensus       153 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  202 (261)
T 3n74_A          153 PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM  202 (261)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc
Confidence            99999999999999999999999999999999999999999 87776553

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=8.6e-40  Score=258.03  Aligned_cols=194  Identities=31%  Similarity=0.429  Sum_probs=174.4

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      |+..+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +..|++|.+
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   71 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSR---------NQKELNDCLTQWRSKGFKVEASVCDLSSRS   71 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHH
Confidence            77778899999999999999999999999999999999988         666666666666654433   456888888


Q ss_pred             chHHHHHHHHHhc-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         78 DGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        78 ~~~~~~~~~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      +++++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..
T Consensus        72 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  151 (260)
T 2ae2_A           72 ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL  151 (260)
T ss_dssp             HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc
Confidence            8999999999999 899999999998877788889999999999999999999999999999987779999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +.++...|++||++++.++++++.|++++||+||+|+||++ |++...
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (260)
T 2ae2_A          152 AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM  199 (260)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh
Confidence            99999999999999999999999999999999999999999 776543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=8e-40  Score=260.84  Aligned_cols=193  Identities=23%  Similarity=0.386  Sum_probs=159.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      +.++++|++|||||++|||+++|++|+++|++|++++|.        +....++..+++...+..   +.+|++|.++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   95 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIG--------DAEGVAPVIAELSGLGARVIFLRADLADLSSHQ   95 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--------CHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCC--------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            345789999999999999999999999999999999852        556666777777665443   456999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCC--CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCcEEEEecCccc
Q psy16220         81 KIVQTALENFGRIDIVINNAGI--LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN---YGRLVMTASNSGL  155 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~  155 (223)
                      ++++++.++++++|+||||||.  ....++.+.+.++|++++++|+.+++.+++.++|+|.+.+   .|+||++||..+.
T Consensus        96 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A           96 ATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             HHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            9999999999999999999998  4557888999999999999999999999999999998765   6899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       176 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  225 (280)
T 4da9_A          176 MTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV  225 (280)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc
Confidence            999999999999999999999999999999999999999999 7776654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-40  Score=260.38  Aligned_cols=192  Identities=31%  Similarity=0.443  Sum_probs=166.4

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      |+..++++||++|||||++|||+++|++|+++|++|++++|         + ...++..+++...+..   +.+|++|.+
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~   92 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR---------T-DGVKEVADEIADGGGSAEAVVADLADLE   92 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------S-THHHHHHHHHHTTTCEEEEEECCTTCHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC---------H-HHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence            44456789999999999999999999999999999999976         2 2334455556554443   345888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++ .+..++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+
T Consensus        93 ~v~~~-~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~  171 (273)
T 3uf0_A           93 GAANV-AEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG  171 (273)
T ss_dssp             HHHHH-HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHH-HHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC
Confidence            88777 44456679999999999998888899999999999999999999999999999999888899999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       172 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (273)
T 3uf0_A          172 GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAA  218 (273)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhh
Confidence            9999999999999999999999999999999999999999 776654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.9e-40  Score=263.74  Aligned_cols=189  Identities=33%  Similarity=0.548  Sum_probs=173.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      +++||++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.++++++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDV---------DQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            478999999999999999999999999999999988         777777878888765543   35688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+.++++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|.+.+ .|+||++||..+..+.++.
T Consensus        99 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  178 (301)
T 3tjr_A           99 ADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL  178 (301)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc
Confidence            999999999999999999998888889999999999999999999999999999998866 6899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|++||+++++|+++|+.|++++||+|++|+||+| |++..+
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  221 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN  221 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccc
Confidence            999999999999999999999999999999999999 877654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.5e-40  Score=263.10  Aligned_cols=190  Identities=23%  Similarity=0.337  Sum_probs=170.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .++++||++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +..|++|..+++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   98 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGV---------KPGSTAAVQQRIIASGGTAQELAGDLSEAGAGT   98 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------STTTTHHHHHHHHHTTCCEEEEECCTTSTTHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHH
Confidence            35688999999999999999999999999999999988         555555666666655443   456888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.+. +++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        99 ~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~  177 (275)
T 4imr_A           99 DLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV  177 (275)
T ss_dssp             HHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC
Confidence            999998777 9999999999998888889999999999999999999999999999999888899999999999998888


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  221 (275)
T 4imr_A          178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD  221 (275)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccc
Confidence            8999999999999999999999999999999999999 776543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.1e-40  Score=262.28  Aligned_cols=189  Identities=21%  Similarity=0.291  Sum_probs=166.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++.+|++|||||++|||+++|++|+++|++|++++|         +....++...   .....+..|++|..+++.+++
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~   79 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLAR---------RVERLKALNL---PNTLCAQVDVTDKYTFDTAIT   79 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEES---------CHHHHHTTCC---TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHhhc---CCceEEEecCCCHHHHHHHHH
Confidence            3467899999999999999999999999999999988         4333322111   122235679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||.++..+.++...|
T Consensus        80 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y  159 (266)
T 3p19_A           80 RAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAY  159 (266)
T ss_dssp             HHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchH
Confidence            99999999999999999988888999999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ++||+++++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc
Confidence            999999999999999999999999999999999 87766543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=3.7e-40  Score=262.01  Aligned_cols=195  Identities=22%  Similarity=0.315  Sum_probs=168.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|+..+...  ....+++..+++...+.   .+.+|++|.+++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPK--LPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTT--SCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhh--hHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999999996543221  11234444555554443   34569999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--CC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--NF  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--~~  159 (223)
                      +++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+  .+
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            9999999999999999999998888889999999999999999999999999999999888899999999999888  67


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCC-Cc-cccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPT-AA-SRLT  201 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg-~v-t~~~  201 (223)
                      +...|++||+++++|+++|+.|++++||+||+|+|| .+ |++.
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~  203 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI  203 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh
Confidence            889999999999999999999999999999999999 57 6655

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.7e-40  Score=287.61  Aligned_cols=201  Identities=58%  Similarity=0.947  Sum_probs=174.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++++|++|||||++|||+++|+.|+++|++|++.+|+......+++....+++.+++...+.....|..|..+.++++
T Consensus         3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v   82 (604)
T 2et6_A            3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIV   82 (604)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHH
Confidence            35689999999999999999999999999999999988543333344556667777778776666677899999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.||++|+||||||+....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.++...
T Consensus        83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~  162 (604)
T 2et6_A           83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQAN  162 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchH
Confidence            99999999999999999998778899999999999999999999999999999999887899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~~  204 (223)
                      |++||+|+.+|+++|+.|++++||+||+|+||..|++....
T Consensus       163 Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~~T~m~~~~  203 (604)
T 2et6_A          163 YASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESI  203 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEccCCcCcccccc
Confidence            99999999999999999999999999999999547765543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.7e-39  Score=258.39  Aligned_cols=190  Identities=31%  Similarity=0.442  Sum_probs=170.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....+++.+++...+..   +.+|++|.+++++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   98 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAAR---------HSDALQVVADEIAGVGGKALPIRCDVTQPDQVRG   98 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------SGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            5789999999999999999999999999999999988         666677777777665443   4568999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccC--
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGN--  158 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~--  158 (223)
                      +++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++. |+||++||..+..+.  
T Consensus        99 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~  178 (276)
T 3r1i_A           99 MLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP  178 (276)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC
Confidence            99999999999999999999988888899999999999999999999999999999987753 899999999887754  


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|++||+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  224 (276)
T 3r1i_A          179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP  224 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc
Confidence            367899999999999999999999999999999999999 777654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-40  Score=259.12  Aligned_cols=190  Identities=28%  Similarity=0.441  Sum_probs=168.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++++        +....++..++++..+..   +..|++|.++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~   97 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN--------AAERAQAVVSEIEQAGGRAVAIRADNRDAEAIE   97 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            457899999999999999999999999999999998652        445566667777665543   456888888999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-CC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-NF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-~~  159 (223)
                      ++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++  .|+||++||..+..+ .+
T Consensus        98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~  175 (271)
T 3v2g_A           98 QAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWP  175 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCST
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCC
Confidence            999999999999999999999988888999999999999999999999999999999976  389999999777665 78


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|++||+++++|+++|+.|++++||+||+|+||+| |++...
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          176 GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA  220 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc
Confidence            99999999999999999999999999999999999999 776543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=6.6e-40  Score=261.20  Aligned_cols=188  Identities=31%  Similarity=0.454  Sum_probs=169.8

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..+   .+|++|.++++.++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   92 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCAR---------DAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAV   92 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999999999999999999999999999988         7777777777887655443   45888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH--HHHhcCCCcEEEEecCcccccCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWP--HMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|  .|.+.+.|+||++||.++..+.++.
T Consensus        93 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  172 (279)
T 3sju_A           93 AAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA  172 (279)
T ss_dssp             HHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC
Confidence            99999999999999999998888889999999999999999999999999999  5777777999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (279)
T 3sju_A          173 APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER  215 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH
Confidence            999999999999999999999999999999999999 776654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.3e-40  Score=262.62  Aligned_cols=189  Identities=22%  Similarity=0.301  Sum_probs=172.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--C---ccccccCCc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA---SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--G---KAVPNYNSV   76 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~   76 (223)
                      .++++|++|||||++|||+++|++|+++|+   +|++++|         +....+++.+++....  .   .+.+|++|.
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~   99 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAAR---------RLEKLEELKKTIDQEFPNAKVHVAQLDITQA   99 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEES---------CHHHHHHHHHHHHHHCTTCEEEEEECCTTCG
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEEC---------CHHHHHHHHHHHHhhCCCCeEEEEECCCCCH
Confidence            457899999999999999999999999998   9999987         7777777777776542  2   345699999


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      ++++++++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++.
T Consensus       100 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  179 (287)
T 3rku_A          100 EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR  179 (287)
T ss_dssp             GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence            9999999999999999999999999875 577889999999999999999999999999999998888999999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++..
T Consensus       180 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          180 DAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL  227 (287)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc
Confidence            999999999999999999999999999999999999999999 77653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-39  Score=255.09  Aligned_cols=190  Identities=35%  Similarity=0.524  Sum_probs=174.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+.+..   +.+|++|..+++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTAT---------SQASAEKFENSMKEKGFKARGLVLNISDIESIQNF   72 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            578999999999999999999999999999999988         777777777777765544   34688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++..
T Consensus        73 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  152 (247)
T 3lyl_A           73 FAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQT  152 (247)
T ss_dssp             HHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcH
Confidence            99999999999999999999888888899999999999999999999999999999988889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|++||+++++|+++++.|++++||+||+|+||++ |++....
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  195 (247)
T 3lyl_A          153 NYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc
Confidence            99999999999999999999999999999999999 7766544

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-39  Score=257.15  Aligned_cols=191  Identities=28%  Similarity=0.442  Sum_probs=168.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.++++
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   86 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR---------NEKELDECLEIWREKGLNVEGSVCDLLSRTERD   86 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            35678999999999999999999999999999999988         666666666676654433   456888888899


Q ss_pred             HHHHHHHHhc-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.+
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  166 (273)
T 1ae1_A           87 KLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP  166 (273)
T ss_dssp             HHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC
Confidence            9999999999 999999999998877888899999999999999999999999999999887779999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  211 (273)
T 1ae1_A          167 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET  211 (273)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhh
Confidence            99999999999999999999999999999999999999 777554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-39  Score=257.87  Aligned_cols=190  Identities=27%  Similarity=0.459  Sum_probs=164.4

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccccccCCccchH
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAVPNYNSVVDGD   80 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   80 (223)
                      +++++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.....  .+....+|..+.+
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~   74 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGR---------REENVNETIKEIRAQYPDAILQPVVADLGTEQ   74 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHHCTTCEEEEEECCTTSHH
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhCCCceEEEEecCCCCHH
Confidence            346789999999999999999999999999999999988         77777777777776532  2222233333322


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                       .++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        75 -~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (267)
T 3t4x_A           75 -GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE  153 (267)
T ss_dssp             -HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT
T ss_pred             -HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc
Confidence             2344566789999999999998888889999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|++||+++++|+++|+.|++++||+||+|+||++ |++..
T Consensus       154 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  196 (267)
T 3t4x_A          154 MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVE  196 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHH
Confidence            9999999999999999999999999999999999999 77554

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-39  Score=258.74  Aligned_cols=194  Identities=27%  Similarity=0.388  Sum_probs=171.4

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVD   78 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   78 (223)
                      |+..+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+  ..+.+|++|.++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~   91 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICAR---------DAEACADTATRLSAYGDCQAIPADLSSEAG   91 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS---------CHHHHHHHHHHHTTSSCEEECCCCTTSHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCceEEEEeeCCCHHH
Confidence            44456789999999999999999999999999999999987         6666666666665432  224568888888


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC----CcEEEEecCcc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY----GRLVMTASNSG  154 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~iv~vsS~~~  154 (223)
                      ++++++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.    |+||++||..+
T Consensus        92 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~  171 (276)
T 2b4q_A           92 ARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG  171 (276)
T ss_dssp             HHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH
Confidence            99999999999999999999999887778889999999999999999999999999999987665    89999999999


Q ss_pred             cccCCCCc-hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        155 LLGNFGQA-NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       155 ~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..+.++.. .|++||++++.|+++++.|++++||+||+|+||++ |++...
T Consensus       172 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  222 (276)
T 2b4q_A          172 ISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH  222 (276)
T ss_dssp             TCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH
T ss_pred             cCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh
Confidence            99888888 99999999999999999999999999999999999 776543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=8.6e-40  Score=256.48  Aligned_cols=186  Identities=27%  Similarity=0.466  Sum_probs=161.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCCh-hhhhHHHHHHHHhCC---ccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSS-KAADTVVAEIRSKGG---KAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   80 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +. ...++   ++.+.+.   .+.+|++|.++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~   70 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADL---------VPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVE   70 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SCCHHHHH---HHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC---------CchhHHHH---HHHhcCCcEEEEEeecCCHHHHH
Confidence            3578999999999999999999999999999999988         33 33332   2333232   2456888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      .+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++
T Consensus        71 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  150 (249)
T 2ew8_A           71 AFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA  150 (249)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC
Confidence            99999999999999999999988777888999999999999999999999999999999877799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|++||++++.|+++++.|++++||+||+|+||++ |++..
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          151 YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence            9999999999999999999999999999999999999 77765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-40  Score=260.31  Aligned_cols=191  Identities=30%  Similarity=0.411  Sum_probs=162.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      +.+++|++|||||++|||+++|++|+++|++|++.++        ++....+++.+++...+..   +.+|++|.+++++
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   94 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYA--------GKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRR   94 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEES--------SCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcC--------CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            4467999999999999999999999999999999854        2455566666666665443   3568888889999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+..+.++.
T Consensus        95 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~  172 (267)
T 3u5t_A           95 LFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG--GRIINMSTSQVGLLHPSY  172 (267)
T ss_dssp             HHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCTHHHHCCTTC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CeEEEEeChhhccCCCCc
Confidence            999999999999999999999888889999999999999999999999999999999764  899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ..|++||+|+++|+++|+.|++++||+||+|+||+| |++..+..
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  217 (267)
T 3u5t_A          173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK  217 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC
Confidence            999999999999999999999999999999999999 88765543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-39  Score=258.13  Aligned_cols=192  Identities=28%  Similarity=0.396  Sum_probs=170.1

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH-HHhCCc---cccccCCccc
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGK---AVPNYNSVVD   78 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~   78 (223)
                      ...++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++ ...+..   +.+|++|.++
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   85 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR---------NLEEASEAAQKLTEKYGVETMAFRCDVSNYEE   85 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            456789999999999999999999999999999999988         666666666665 333332   3568888888


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc-cccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS-GLLG  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~-~~~~  157 (223)
                      ++.+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||.. +..+
T Consensus        86 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  165 (267)
T 1vl8_A           86 VKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT  165 (267)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC
Confidence            999999999999999999999998877788899999999999999999999999999999887779999999998 8888


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++...|++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       166 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  212 (267)
T 1vl8_A          166 MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA  212 (267)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc
Confidence            8999999999999999999999999999999999999999 776543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.1e-39  Score=262.65  Aligned_cols=198  Identities=31%  Similarity=0.511  Sum_probs=174.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCC---CCCChhhhhHHHHHHHHhCCcc---ccccCCccc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG---DGKSSKAADTVVAEIRSKGGKA---VPNYNSVVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   78 (223)
                      .+++||++|||||++|||+++|++|+++|++|++++|......   ..++...+++..+++...+..+   .+|++|.++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            3578999999999999999999999999999999988643221   1234566666666666655443   468888889


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~  157 (223)
                      ++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++ .|+||++||..+..+
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~  201 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG  201 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence            9999999999999999999999998888899999999999999999999999999999998764 589999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .++...|++||+|+++|+++|+.|++++||+||+|+||+| |++..
T Consensus       202 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          202 APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence            9999999999999999999999999999999999999999 77653

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.6e-39  Score=255.24  Aligned_cols=194  Identities=27%  Similarity=0.413  Sum_probs=169.6

Q ss_pred             ccccCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccCCccc
Q psy16220          4 QVRFDGRVAIVTGAG-AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYNSVVD   78 (223)
Q Consensus         4 ~~~~~~~~~lItGa~-~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   78 (223)
                      ...+++|++|||||+ +|||+++|++|+++|++|++++|         +....++..+++.+.+.    .+.+|++|.++
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   87 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDY---------HERRLGETRDQLADLGLGRVEAVVCDVTSTEA   87 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTCSSCEEEEECCTTCHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecC---------CHHHHHHHHHHHHhcCCCceEEEEeCCCCHHH
Confidence            345889999999997 59999999999999999999988         67777777777765432    34568999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCccccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLLG  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~  157 (223)
                      ++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++. +.++||++||..+..+
T Consensus        88 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~  167 (266)
T 3o38_A           88 VDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA  167 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC
Confidence            999999999999999999999999888888999999999999999999999999999999876 5689999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      .++...|+++|+|+++|+++|+.|++++||+||+|+||+| |++......
T Consensus       168 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  217 (266)
T 3o38_A          168 QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS  217 (266)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc
Confidence            9999999999999999999999999999999999999999 777665544

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-39  Score=255.92  Aligned_cols=191  Identities=32%  Similarity=0.472  Sum_probs=169.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CC---ccccccCCccc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GG---KAVPNYNSVVD   78 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~   78 (223)
                      ..++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+.  +.   .+.+|++|.++
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   78 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV---------SSEGLEASKAAVLETAPDAEVLTTVADVSDEAQ   78 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhcCCceEEEEEccCCCHHH
Confidence            34678999999999999999999999999999999988         666666666666543  22   23568888889


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      ++++++++.++++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+
T Consensus        79 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (267)
T 1iy8_A           79 VEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG  158 (267)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC
Confidence            999999999999999999999998766 7788899999999999999999999999999999877799999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++...|++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  205 (267)
T 1iy8_A          159 IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  205 (267)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhc
Confidence            9999999999999999999999999999999999999999 776543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.1e-39  Score=254.45  Aligned_cols=192  Identities=24%  Similarity=0.372  Sum_probs=169.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.+++++
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   95 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTAR---------DVEKLRAVEREIVAAGGEAESHACDLSHSDAIAA   95 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHH
Confidence            4578999999999999999999999999999999988         777777777777765543   3468888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCC-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+||||||. ...+++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++
T Consensus        96 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  175 (262)
T 3rkr_A           96 FATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD  175 (262)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC
Confidence            999999999999999999998 4557888999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ...|+++|+++++|+++++.|++++||+||+|+||+| |++.....
T Consensus       176 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  221 (262)
T 3rkr_A          176 GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS  221 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc
Confidence            9999999999999999999999999999999999999 77765543

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.4e-39  Score=256.79  Aligned_cols=188  Identities=30%  Similarity=0.494  Sum_probs=168.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .+++||++|||||++|||+++|++|+++|++|++++++        +....++..+++...+..   +.+|++|..++++
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   85 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN--------STKDAEKVVSEIKALGSDAIAIKADIRQVPEIVK   85 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            45889999999999999999999999999999998752        455566667777665543   3568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc-ccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS-GLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~-~~~~~~~  160 (223)
                      +++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||.. +..+.++
T Consensus        86 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  163 (270)
T 3is3_A           86 LFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPK  163 (270)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCC
Confidence            99999999999999999999988888999999999999999999999999999999977  38999999988 5678899


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  206 (270)
T 3is3_A          164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFH  206 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh
Confidence            9999999999999999999999999999999999999 77765

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=3.4e-39  Score=254.99  Aligned_cols=189  Identities=26%  Similarity=0.387  Sum_probs=170.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~   80 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++... +.   .+.+|++|.++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   73 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR---------QVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVD   73 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            5688999999999999999999999999999999988         666666666666543 32   2456888988999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++
T Consensus        74 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (263)
T 3ai3_A           74 AVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY  153 (263)
T ss_dssp             HHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC
Confidence            99999999999999999999988778888999999999999999999999999999998877799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|++||++++.++++++.|++++||+||+|+||++ |++..
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (263)
T 3ai3_A          154 EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI  196 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh
Confidence            9999999999999999999999999999999999999 76644

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.1e-39  Score=258.16  Aligned_cols=184  Identities=29%  Similarity=0.453  Sum_probs=163.8

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      .+.++++|++|||||++|||+++|++|+++|++|++++|+.....         .        ......|++|..+++.+
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~---------~--------~~~~~~Dv~~~~~~~~~   84 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA---------A--------DLHLPGDLREAAYADGL   84 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC---------C--------SEECCCCTTSHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------h--------hhccCcCCCCHHHHHHH
Confidence            345789999999999999999999999999999999988433211         1        01236788999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++..
T Consensus        85 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  164 (266)
T 3uxy_A           85 PGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHA  164 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBH
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCCh
Confidence            99999999999999999999888888999999999999999999999999999999988889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       165 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  206 (266)
T 3uxy_A          165 LYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRT  206 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhh
Confidence            99999999999999999999999999999999999 776543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3e-39  Score=254.93  Aligned_cols=189  Identities=30%  Similarity=0.465  Sum_probs=169.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|.++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   73 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---------LDEEGKAMAAELADAARYVHLDVTQPAQWKAAVD   73 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999988         5555555555554333345679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++...|
T Consensus        74 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (260)
T 1nff_A           74 TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGY  153 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhH
Confidence            99999999999999999887778889999999999999999999999999999998777999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++||++++.++++++.|++++||+||+|+||++ |++..
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence            999999999999999999999999999999999 77654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.5e-39  Score=254.60  Aligned_cols=189  Identities=28%  Similarity=0.394  Sum_probs=168.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|.+++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---------LDEEGAATARELGDAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987         55555555444422223345789999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++...|+
T Consensus        73 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  152 (254)
T 1hdc_A           73 AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYG  152 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHH
Confidence            99999999999999998877788889999999999999999999999999999987779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       153 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1hdc_A          153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE  191 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc
Confidence            99999999999999999999999999999999 776554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-39  Score=252.00  Aligned_cols=194  Identities=28%  Similarity=0.426  Sum_probs=172.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-c---ccccc--CCccc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-K---AVPNY--NSVVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~--~~~~~   78 (223)
                      ..+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+. .   +..|+  +|..+
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~   80 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGR---------TEASLAEVSDQIKSAGQPQPLIIALNLENATAQQ   80 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEec---------CHHHHHHHHHHHHhcCCCCceEEEeccccCCHHH
Confidence            4578999999999999999999999999999999988         77777777777776542 1   22344  77888


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      ++.+++++.+.++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|++.+.++||++||..+..+
T Consensus        81 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  160 (247)
T 3i1j_A           81 YRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG  160 (247)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC
Confidence            8999999999999999999999986 457788999999999999999999999999999999888899999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-ccccccCCCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      .++...|+++|+++++|+++|+.|+++ +||+||+|+||++ |++..+..+.
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~  212 (247)
T 3i1j_A          161 RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD  212 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc
Confidence            999999999999999999999999987 8999999999999 8877665543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-39  Score=253.23  Aligned_cols=186  Identities=34%  Similarity=0.542  Sum_probs=165.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.  ...+.+|++|.+++++++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~   70 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI---------EEGPLREAAEAVG--AHPVVMDVADPASVERGFAE   70 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHcC--CEEEEecCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999987         5555544433331  22345689999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.. ..+.++...|+
T Consensus        71 ~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~  149 (245)
T 1uls_A           71 ALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYA  149 (245)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHH
Confidence            99999999999999998877788899999999999999999999999999999987779999999998 88889999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++|+++.+|+++++.|++++||+||+|+||++ |++...
T Consensus       150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  188 (245)
T 1uls_A          150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK  188 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh
Confidence            99999999999999999999999999999999 776543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.8e-39  Score=253.28  Aligned_cols=193  Identities=32%  Similarity=0.524  Sum_probs=152.7

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVD   78 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   78 (223)
                      |..+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|..+
T Consensus         2 p~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   72 (253)
T 3qiv_A            2 PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI---------NAEAAEAVAKQIVADGGTAISVAVDVSDPES   72 (253)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCEEEEEECCTTSHHH
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHH
Confidence            3457789999999999999999999999999999999988         777777777777665543   4568889999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCC---CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGIL---RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      ++++++++.+.++++|+||||||..   ...++.+.+.++|++++++|+.+++.+++.++|.|.+.+.|+||++||..+.
T Consensus        73 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  152 (253)
T 3qiv_A           73 AKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW  152 (253)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence            9999999999999999999999984   3456778999999999999999999999999999998888999999998876


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                         ++...|++||+++++|+++++.|++++||+||+|+||+| |++.....+
T Consensus       153 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  201 (253)
T 3qiv_A          153 ---LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP  201 (253)
T ss_dssp             ----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc
Confidence               456789999999999999999999999999999999999 776655443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=4.1e-39  Score=261.16  Aligned_cols=191  Identities=26%  Similarity=0.358  Sum_probs=169.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   79 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.     .+.+|++|..++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v   74 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI---------RQDSIDKALATLEAEGSGPEVMGVQLDVASREGF   74 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHH
Confidence            4688999999999999999999999999999999988         77777777777766543     345699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CCCcEEEEecCc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNS  153 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~vsS~~  153 (223)
                      +.+++.+.+.++++|+||||||.....++.+.+.++|++++++|+.|++.+++.++|.|.++      +.|+||++||.+
T Consensus        75 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a  154 (319)
T 3ioy_A           75 KMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA  154 (319)
T ss_dssp             HHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGG
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccc
Confidence            99999999999999999999999888889999999999999999999999999999999875      568999999999


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        154 GLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       154 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +..+.++...|++||+|+++|+++|+.|++++||+|++|+||+| |++....
T Consensus       155 ~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          155 AFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             GTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred             cccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence            99999999999999999999999999999999999999999999 8776643

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=2.8e-39  Score=255.01  Aligned_cols=186  Identities=15%  Similarity=0.190  Sum_probs=157.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+         .....+..++.  ....+.+|++|.+++++++
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---------~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~   90 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRT---------EHASVTELRQA--GAVALYGDFSCETGIMAFI   90 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESS---------CCHHHHHHHHH--TCEEEECCTTSHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---------hHHHHHHHHhc--CCeEEECCCCCHHHHHHHH
Confidence            467899999999999999999999999999999999883         33322222222  1334567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||...... .+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++...
T Consensus        91 ~~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  169 (260)
T 3gem_A           91 DLLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIA  169 (260)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHH
T ss_pred             HHHHHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHh
Confidence            999999999999999999876555 5678899999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |++||+++++|+++|+.|+++ +|+||+|+||++ |++..
T Consensus       170 Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~  208 (260)
T 3gem_A          170 YCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD  208 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence            999999999999999999998 799999999999 66543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-39  Score=255.89  Aligned_cols=190  Identities=33%  Similarity=0.484  Sum_probs=170.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   73 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM---------NREALEKAEASVREKGVEARSYVCDVTSEEAVIG   73 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            3578999999999999999999999999999999987         666666666677654433   3568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.++
T Consensus        74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (262)
T 1zem_A           74 TVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN  153 (262)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC
Confidence            9999999999999999999987 667888899999999999999999999999999998877799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       154 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          154 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence            9999999999999999999999999999999999999 776543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=4.4e-39  Score=253.98  Aligned_cols=189  Identities=32%  Similarity=0.533  Sum_probs=165.0

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhh-hhHHHHHHHHh-CC---ccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKA-ADTVVAEIRSK-GG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~-~~---~~~~~~~~~~~~~~   81 (223)
                      +++|++|||||++|||+++|++|+++|++|++++|         +... .++..+++... +.   .+..|++|.+++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   72 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF---------GDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECC---------SCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC---------CcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999987         4444 55555566543 32   34568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++.
T Consensus        73 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  152 (260)
T 1x1t_A           73 LVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK  152 (260)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCC
Confidence            99999999999999999999887778888999999999999999999999999999988777999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..|++||++++.|+++++.|++++||+||+|+||++ |++....
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  196 (260)
T 1x1t_A          153 SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence            999999999999999999999999999999999999 7776543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=5.7e-39  Score=257.82  Aligned_cols=192  Identities=16%  Similarity=0.169  Sum_probs=166.5

Q ss_pred             CCCccccCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCc
Q psy16220          1 MPEQVRFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSV   76 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   76 (223)
                      |+.++.+++|++|||||++  |||+++|++|+++|++|++++|         +....+...+.....+  ..+.+|++|.
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   92 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYL---------SETFKKRVDPLAESLGVKLTVPCDVSDA   92 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES---------SGGGHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHhcCCeEEEEcCCCCH
Confidence            5556788999999999996  9999999999999999999988         3322222222222222  2356799999


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN  152 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  152 (223)
                      ++++++++++.++++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||.
T Consensus        93 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~  170 (296)
T 3k31_A           93 ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYY  170 (296)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEeh
Confidence            99999999999999999999999998764    67889999999999999999999999999999876  4899999999


Q ss_pred             cccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        153 SGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       153 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       171 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  222 (296)
T 3k31_A          171 GAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG  222 (296)
T ss_dssp             GGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS
T ss_pred             hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc
Confidence            999999999999999999999999999999999999999999999 766543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.7e-39  Score=256.71  Aligned_cols=195  Identities=31%  Similarity=0.458  Sum_probs=165.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCC---CCCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDG---DGKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.....   ..++.+..++..+++...+..   +.+|++|.+
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            45689999999999999999999999999999999998532111   112355566666666655543   356888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLL  156 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~  156 (223)
                      +++++++++.++++++|+||||||......    +.++|++++++|+.+++.+++.++|+|.+++ .|+||++||.++..
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLA  163 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcC
Confidence            899999999999999999999999865432    5899999999999999999999999998764 68999999999988


Q ss_pred             cC----CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        157 GN----FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       157 ~~----~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +.    ++...|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       164 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  214 (278)
T 3sx2_A          164 GVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN  214 (278)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred             CCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch
Confidence            77    778899999999999999999999999999999999999 77765

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=5.1e-39  Score=255.09  Aligned_cols=193  Identities=33%  Similarity=0.474  Sum_probs=169.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+        +....+...++++..+..   +.+|++|..+++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   95 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS--------NAEVADALKNELEEKGYKAAVIKFDAASESDFI   95 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            467889999999999999999999999999999999872        344455555666655443   356888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++
T Consensus        96 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  175 (271)
T 4iin_A           96 EAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG  175 (271)
T ss_dssp             HHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC
Confidence            99999999999999999999998888888999999999999999999999999999999888899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ...|++||++++.|+++|+.|++++||+||+|+||+| |++....
T Consensus       176 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  220 (271)
T 4iin_A          176 QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL  220 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh
Confidence            9999999999999999999999999999999999999 7776554

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-39  Score=252.80  Aligned_cols=187  Identities=29%  Similarity=0.407  Sum_probs=167.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +... ++..+++. . ..+..|++|.++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~   69 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL---------RPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVE   69 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------STTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------ChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999988         3333 33344443 2 445679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++...|
T Consensus        70 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  149 (256)
T 2d1y_A           70 EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAY  149 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhH
Confidence            99999999999999999887778889999999999999999999999999999998877999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++||++++.|+++++.|++++||+||+|+||++ |++...
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  189 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE  189 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh
Confidence            999999999999999999999999999999999 776544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=7.9e-39  Score=250.55  Aligned_cols=189  Identities=38%  Similarity=0.614  Sum_probs=168.3

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|++++|.        +....++..++++..+..   +.+|++|.+++++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAG--------NEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMV   73 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            578999999999999999999999999999998762        444555556666554433   456888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++...
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  153 (246)
T 2uvd_A           74 KQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQAN  153 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCch
Confidence            99999999999999999988777888999999999999999999999999999998877799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  194 (246)
T 2uvd_A          154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV  194 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh
Confidence            9999999999999999999999999999999999 776554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.4e-38  Score=255.24  Aligned_cols=187  Identities=26%  Similarity=0.348  Sum_probs=164.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|+       +.....+...+.++..+..   +.+|++|.+++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  117 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP-------AEEEDAQQVKALIEECGRKAVLLPGDLSDESFARS  117 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG-------GGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-------cchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHH
Confidence            46789999999999999999999999999999999772       1223444455555544433   4568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|.+.  |+||++||..+..+.++
T Consensus       118 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--g~Iv~isS~~~~~~~~~  195 (294)
T 3r3s_A          118 LVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPH  195 (294)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT--CEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECChhhccCCCC
Confidence            99999999999999999999865 4678899999999999999999999999999998654  89999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ...|++||+++++|+++|+.|++++||+||+|+||+| |++
T Consensus       196 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence            9999999999999999999999999999999999999 766

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.6e-39  Score=253.73  Aligned_cols=192  Identities=31%  Similarity=0.445  Sum_probs=168.7

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      ...+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|..++++
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~   75 (263)
T 3ak4_A            5 AGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADL---------DVMAAQAVVAGLENGGFAVEVDVTKRASVDA   75 (263)
T ss_dssp             -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHTCTTCCEEEECCTTCHHHHHH
T ss_pred             ccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhcCCeEEEEeCCCHHHHHH
Confidence            3345688999999999999999999999999999999987         5555544444433223345679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.++++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+.+ .++||++||..+..+.++
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  155 (263)
T 3ak4_A           76 AMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL  155 (263)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC
Confidence            9999999999999999999988777888899999999999999999999999999998776 699999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|++||++++.++++++.|++++||+||+|+||++ |++..
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  198 (263)
T 3ak4_A          156 LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE  198 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh
Confidence            9999999999999999999999999999999999999 76643

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=7e-39  Score=252.80  Aligned_cols=188  Identities=23%  Similarity=0.334  Sum_probs=169.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--C---CccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--G---GKAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~   79 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...  +   ..+..|++|.+++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   73 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSR---------NREKLEAAASRIASLVSGAQVDIVAGDIREPGDI   73 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHH
Confidence            4678999999999999999999999999999999988         666666666666542  2   2345688888899


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +.+++++.+.++ +|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.|+||++||..+..+.+
T Consensus        74 ~~~~~~~~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  152 (260)
T 2z1n_A           74 DRLFEKARDLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ  152 (260)
T ss_dssp             HHHHHHHHHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC
Confidence            999999999999 9999999998777788899999999999999999999999999999887779999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +...|++||+++++++++++.|++++||+||+|+||++ |++..
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          153 DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence            99999999999999999999999999999999999999 77755

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=9.3e-39  Score=256.02  Aligned_cols=187  Identities=21%  Similarity=0.218  Sum_probs=165.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc-cCCCCCCCCCChhhhhHHHHHHH-HhCC---ccccccCCcc--
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND-LGGQRDGDGKSSKAADTVVAEIR-SKGG---KAVPNYNSVV--   77 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~--   77 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++ |         +....++..+++. ..+.   .+..|++|..  
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~   75 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR---------SAAEANALSATLNARRPNSAITVQADLSNVATA   75 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---------CHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCC---------CHHHHHHHHHHHhhhcCCeeEEEEeecCCcccc
Confidence            467899999999999999999999999999999998 7         6666666666665 2222   3456999988  


Q ss_pred             ---------------chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCC--------------HHHHHHHHHhhhhHHH
Q psy16220         78 ---------------DGDKIVQTALENFGRIDIVINNAGILRDKSFARIS--------------DTDWQLVQDVHLTGAF  128 (223)
Q Consensus        78 ---------------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~  128 (223)
                                     +++.+++++.+.++++|+||||||.....++.+.+              .++|+.++++|+.+++
T Consensus        76 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  155 (291)
T 1e7w_A           76 PVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY  155 (291)
T ss_dssp             CCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHH
T ss_pred             cccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHH
Confidence                           89999999999999999999999988777888888              9999999999999999


Q ss_pred             HHHHHHHHHHHhcC------CCcEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        129 RVSRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       129 ~l~~~~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      .+++.++|+|.+.+      .|+||++||..+..+.++...|++||+++.+|+++|+.|++++||+||+|+||+| |++
T Consensus       156 ~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          156 FLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             HHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            99999999998776      6899999999999999999999999999999999999999999999999999999 776

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=5.1e-39  Score=253.49  Aligned_cols=190  Identities=30%  Similarity=0.482  Sum_probs=163.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|+++++.        +....+...+++...+..   +.+|++|.+++++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG--------AAEGAATAVAEIEKLGRSALAIKADLTNAAEVEA   75 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS--------SCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            46899999999999999999999999999999998541        455556666666654443   4568889999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCC
Q psy16220         82 IVQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNF  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~  159 (223)
                      +++++.++++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+. .+.+
T Consensus        76 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~  153 (259)
T 3edm_A           76 AISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGP  153 (259)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHCCST
T ss_pred             HHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CEEEEEcCHHhccCCCC
Confidence            9999999999999999999987 56788899999999999999999999999999999763  899999999988 7889


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +...|++||+|+++|+++|+.|+++. |+||+|+||+| |++.....
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~  199 (259)
T 3edm_A          154 GALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT  199 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc
Confidence            99999999999999999999999986 99999999999 87776554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=259.84  Aligned_cols=199  Identities=24%  Similarity=0.329  Sum_probs=172.6

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVD   78 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   78 (223)
                      +...+++||++|||||++|||+++|++|+++|++|++++|+..+...  ....+++..+++...+..   +.+|++|.++
T Consensus        38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~--l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~  115 (346)
T 3kvo_A           38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPK--LLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ  115 (346)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSS--SCCCHHHHHHHHHHTTCEEEEEECCTTCHHH
T ss_pred             ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhh--hHHHHHHHHHHHHhcCCeEEEEEccCCCHHH
Confidence            44567899999999999999999999999999999999986544221  122344555566655443   4568999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-  157 (223)
                      ++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+ 
T Consensus       116 v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~  195 (346)
T 3kvo_A          116 ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV  195 (346)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC
Confidence            9999999999999999999999998888899999999999999999999999999999999988899999999999887 


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCC-c-cccccc
Q psy16220        158 -NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTA-A-SRLTED  203 (223)
Q Consensus       158 -~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~-v-t~~~~~  203 (223)
                       .++...|++||+++++|+++|+.|++ +||+||+|+||. + |++.+.
T Consensus       196 ~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~  243 (346)
T 3kvo_A          196 WFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM  243 (346)
T ss_dssp             GTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHh
Confidence             78899999999999999999999999 899999999995 7 665543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=4.2e-39  Score=255.25  Aligned_cols=182  Identities=26%  Similarity=0.422  Sum_probs=163.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+....         .       .....+.+|++|.+++++++
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------~-------~~~~~~~~Dv~~~~~v~~~~   72 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------V-------NVSDHFKIDVTNEEEVKEAV   72 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------T-------TSSEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------c-------CceeEEEecCCCHHHHHHHH
Confidence            4568899999999999999999999999999999998843321         0       11223567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++...
T Consensus        73 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  152 (269)
T 3vtz_A           73 EKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAA  152 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChh
Confidence            99999999999999999998888889999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |++||+++++|+++|+.|+++ +|+||+|+||+| |++..
T Consensus       153 Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~  191 (269)
T 3vtz_A          153 YVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVI  191 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchh
Confidence            999999999999999999998 999999999999 77654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-39  Score=256.73  Aligned_cols=190  Identities=25%  Similarity=0.383  Sum_probs=169.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC------ccccccCCccc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG------KAVPNYNSVVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~   78 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.      .+.+|++|..+
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~   92 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR---------NEDRLEETKQQILKAGVPAEKINAVVADVTEASG   92 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHH
Confidence            4688999999999999999999999999999999988         66666666667765432      34568899999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCC--CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKS--FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      ++++++++.+.++++|+||||||.....+  +.+.+.++|++++++|+.+++.+++.++|.|.+.+ |+||++||..+..
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~  171 (297)
T 1xhl_A           93 QDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP  171 (297)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc
Confidence            99999999999999999999999876666  88899999999999999999999999999998776 9999999999988


Q ss_pred             cC-CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        157 GN-FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       157 ~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +. ++...|++||+++++|+++++.|++++||+||+|+||+| |++....
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  221 (297)
T 1xhl_A          172 QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM  221 (297)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc
Confidence            88 899999999999999999999999999999999999999 7775543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1e-38  Score=251.26  Aligned_cols=192  Identities=29%  Similarity=0.444  Sum_probs=167.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      ...++|++|||||++|||+++|++|+++|++|+++++.        +....++..+++...+..   +..|++|.+++++
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGP--------NSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQ   80 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECT--------TCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHH
Confidence            45679999999999999999999999999999998742        333344445555554433   3568888889999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++.
T Consensus        81 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  160 (256)
T 3ezl_A           81 AFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ  160 (256)
T ss_dssp             HHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCC
Confidence            99999999999999999999988888899999999999999999999999999999998888999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          161 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc
Confidence            999999999999999999999999999999999999 7776554

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.3e-38  Score=251.09  Aligned_cols=186  Identities=25%  Similarity=0.360  Sum_probs=166.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhh--hhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKA--ADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      +|++|||||++|||+++|++|+++|++|++++|         +...  .++..++++..+..   +.+|++|.+++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   72 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADL---------PQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAI   72 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC---------GGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            689999999999999999999999999999987         4444  55556666544333   356888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~  162 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+. |+||++||..+..+.++..
T Consensus        73 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  152 (258)
T 3a28_C           73 DEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILS  152 (258)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCch
Confidence            999999999999999999887778889999999999999999999999999999988776 8999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  194 (258)
T 3a28_C          153 AYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ  194 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh
Confidence            99999999999999999999999999999999999 776543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.9e-38  Score=250.25  Aligned_cols=189  Identities=25%  Similarity=0.406  Sum_probs=168.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|+.|.++++.
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   80 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSR---------KQENVDRTVATLQGEGLSVTGTVCHVGKAEDRER   80 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            4578999999999999999999999999999999988         666666666666654433   3468888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|++.+.++||++||..+..+.++
T Consensus        81 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  160 (260)
T 2zat_A           81 LVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN  160 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC
Confidence            99999999999999999999764 46778899999999999999999999999999998877799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|+++|++++.|+++++.|++++||+||+|+||++ |++..
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  203 (260)
T 2zat_A          161 LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ  203 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch
Confidence            9999999999999999999999999999999999999 77654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.9e-39  Score=252.22  Aligned_cols=184  Identities=24%  Similarity=0.365  Sum_probs=163.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.......               ....+..|++|.+++++++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---------------~~~~~~~Dv~d~~~v~~~~   87 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---------------DIHTVAGDISKPETADRIV   87 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---------------TEEEEESCTTSHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---------------ceEEEEccCCCHHHHHHHH
Confidence            4568899999999999999999999999999999999854332100               1234567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--cCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--GNFGQ  161 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~--~~~~~  161 (223)
                      +++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..  +.++.
T Consensus        88 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  167 (260)
T 3un1_A           88 REGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPS  167 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCC
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCcc
Confidence            9999999999999999999888888999999999999999999999999999999998889999999987764  44566


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ..|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  209 (260)
T 3un1_A          168 ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP  209 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCC
Confidence            899999999999999999999999999999999999 77654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1e-38  Score=254.60  Aligned_cols=187  Identities=28%  Similarity=0.429  Sum_probs=160.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|..++++++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   72 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDK---------SAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAER   72 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC---------CHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987         66666555544433333456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCC-CCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         86 ALENFGRIDIVINNAGILRD-KSF----ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~-~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +.+.++++|+||||||.... .++    .+.+.++|++++++|+.+++.+++.++|+|.+++ |+||++||..+..+.++
T Consensus        73 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~  151 (281)
T 3zv4_A           73 CLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGG  151 (281)
T ss_dssp             HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSS
T ss_pred             HHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCC
Confidence            99999999999999998643 222    2445678999999999999999999999998765 99999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+++++|+++|+.|+++. |+||+|+||+| |++...
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccc
Confidence            9999999999999999999999987 99999999999 776543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-38  Score=248.51  Aligned_cols=185  Identities=22%  Similarity=0.318  Sum_probs=165.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ||++|||||++|||+++|++|+++|  +.|++.+|         +....+++.+++......+..|++|.++++++++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR---------SEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAA   72 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES---------CHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC---------CHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH
Confidence            6899999999999999999999985  78888877         666666666666444445677999999999999999


Q ss_pred             HHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         87 LENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      .++++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|+|++.+ |+||++||..+..+.++...|+
T Consensus        73 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~  151 (254)
T 3kzv_A           73 VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYG  151 (254)
T ss_dssp             HHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHH
T ss_pred             HHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHH
Confidence            9999999999999998644 7888999999999999999999999999999998876 9999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +||+++++|+++|+.|+  +||+||+|+||++ |++.....
T Consensus       152 asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~  190 (254)
T 3kzv_A          152 SSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIR  190 (254)
T ss_dssp             HHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCC
T ss_pred             HHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhh
Confidence            99999999999999998  6899999999999 87776543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.2e-38  Score=252.63  Aligned_cols=191  Identities=31%  Similarity=0.521  Sum_probs=169.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|+++++.        +....+...+++...+..   +.+|++|..++++++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   94 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE--------RNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCA   94 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECS--------CHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC--------chHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            678999999999999999999999999999998741        445555555555544433   356888888999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.++++++|+||||||.....++.+.+.++|+.++++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...
T Consensus        95 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  174 (269)
T 3gk3_A           95 EKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQAN  174 (269)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcch
Confidence            99999999999999999998888889999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |++||+|+++|+++|+.|++++||+||+|+||+| |++.....
T Consensus       175 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  217 (269)
T 3gk3_A          175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP  217 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc
Confidence            9999999999999999999999999999999999 77766543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=6.4e-39  Score=255.69  Aligned_cols=189  Identities=28%  Similarity=0.381  Sum_probs=168.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|..+++.++++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~   72 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR---------RTEALDDLVAAYPDRAEAISLDVTDGERIDVVAAD   72 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------SGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999988         55555555444433333456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+
T Consensus        73 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (281)
T 3m1a_A           73 VLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYS  152 (281)
T ss_dssp             HHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHH
Confidence            99999999999999999877888899999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +||+++++++++++.|++++||+||+|+||++ |++...
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          153 ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence            99999999999999999999999999999999 776543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-38  Score=253.64  Aligned_cols=188  Identities=25%  Similarity=0.375  Sum_probs=168.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC------ccccccCCccch
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG------KAVPNYNSVVDG   79 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~   79 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.      .+.+|++|.+++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR---------SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQ   73 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHH
Confidence            578999999999999999999999999999999988         66666666666655332      345689999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCC----CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKS----FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      +.+++++.++++++|+||||||.....+    +.+.+.++|++++++|+.+++.+++.++|.|.+.+ |+||++||..+.
T Consensus        74 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~  152 (280)
T 1xkq_A           74 DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG  152 (280)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCcccc
Confidence            9999999999999999999999876666    77889999999999999999999999999998766 999999999998


Q ss_pred             ccC-CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        156 LGN-FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       156 ~~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+. ++...|++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       153 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  202 (280)
T 1xkq_A          153 PQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNA  202 (280)
T ss_dssp             SSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccc
Confidence            888 889999999999999999999999999999999999999 776554

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-38  Score=249.05  Aligned_cols=186  Identities=28%  Similarity=0.408  Sum_probs=167.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +.+|++|.+++++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   72 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADY---------NDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ   72 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            589999999999999999999999999999987         666666666666654432   45688888889999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+ .|+||++||..+..+.++...|
T Consensus        73 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  152 (256)
T 1geg_A           73 ARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVY  152 (256)
T ss_dssp             HHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhH
Confidence            999999999999999988777888899999999999999999999999999998766 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       153 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  192 (256)
T 1geg_A          153 SSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE  192 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh
Confidence            999999999999999999999999999999999 776543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.2e-38  Score=251.25  Aligned_cols=188  Identities=31%  Similarity=0.472  Sum_probs=169.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||+++|+.|+++|++|++++|         +....++..+++.+.+..   +.+|++|.++++.+
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCAR---------GEEGLRTTLKELREAGVEADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            578999999999999999999999999999999988         666666666677654433   45688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--HHhcCCCcEEEEecCcccccCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.  |.+++.|+||++||..+..+.++
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  169 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH  169 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC
Confidence            9999999999999999999887778888999999999999999999999999999  88776789999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ...|+++|++++.|+++++.|++++||+||+|+||++ |++..
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  212 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA  212 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh
Confidence            9999999999999999999999999999999999999 77644

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-38  Score=256.03  Aligned_cols=191  Identities=27%  Similarity=0.327  Sum_probs=165.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|+..    .++....+.+.+.+...+.   .+.+|++|..+++.+
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~----~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~   77 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIV----GRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRA   77 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTT----TTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCccc----ccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            467899999999999999999999999999999987432    2355666666666655443   345699999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~  161 (223)
                      ++++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++.. +.++.
T Consensus        78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~  157 (324)
T 3u9l_A           78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYL  157 (324)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcc
Confidence            99999999999999999999888889999999999999999999999999999999988889999999998885 45678


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ..|++||+++++++++|+.|++++||+|++|+||++ |++
T Consensus       158 ~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          158 APYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence            899999999999999999999999999999999999 443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=9.6e-39  Score=259.36  Aligned_cols=202  Identities=41%  Similarity=0.607  Sum_probs=173.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCC-CCCCChhhhhHHHHHHHHhCCc---cccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRD-GDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   79 (223)
                      +..++||++|||||++|||+++|++|+++|++|++++|+.... ...+.....++..+++...+..   +.+|++|.+++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            3457899999999999999999999999999999998853211 1122355666677777665543   34588888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCcEEEEecCc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN------YGRLVMTASNS  153 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~vsS~~  153 (223)
                      +++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+      .|+||++||..
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~  181 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA  181 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHH
Confidence            999999999999999999999998888889999999999999999999999999999988532      37999999999


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        154 GLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       154 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +..+.++...|++||+|+++|+++|+.|++++||+||+|+|| + |++......
T Consensus       182 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~  234 (322)
T 3qlj_A          182 GLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA  234 (322)
T ss_dssp             HHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC
T ss_pred             HccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh
Confidence            999999999999999999999999999999999999999999 6 877766543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=7.1e-39  Score=256.68  Aligned_cols=189  Identities=23%  Similarity=0.376  Sum_probs=164.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .+++||++|||||++|||+++|++|+++|++|++++|+        .....+...+.+...+..   +..|++|.+++++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  114 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD--------EEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKD  114 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------chHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35789999999999999999999999999999999872        222333444444444433   3568889999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+..+.++
T Consensus       115 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~  192 (291)
T 3ijr_A          115 IVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG--DVIINTASIVAYEGNET  192 (291)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT--CEEEEECCTHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CEEEEEechHhcCCCCC
Confidence            99999999999999999999864 3678889999999999999999999999999998653  89999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+++++|+++|+.|++++||+||+|+||+| |++..+
T Consensus       193 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  236 (291)
T 3ijr_A          193 LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS  236 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc
Confidence            9999999999999999999999999999999999999 877544

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.2e-38  Score=252.99  Aligned_cols=188  Identities=20%  Similarity=0.267  Sum_probs=162.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   83 (223)
                      +++ |++|||||++|||+++|++|+++|++|++++|         +....++..+++...  ...+..|++|.++++.++
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   88 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGR---------REERLQALAGELSAKTRVLPLTLDVRDRAAMSAAV   88 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHH
Confidence            456 89999999999999999999999999999988         666666666666432  223456888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-cEEEEecCcccccCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~  161 (223)
                      +++.+.++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|++.+.| +||++||..+..+.++.
T Consensus        89 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~  168 (272)
T 2nwq_A           89 DNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGS  168 (272)
T ss_dssp             HTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCC
Confidence            9988899999999999998764 788899999999999999999999999999999887778 99999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+++|+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  211 (272)
T 2nwq_A          169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV  211 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred             chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence            999999999999999999999999999999999999 776543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=4.7e-38  Score=247.41  Aligned_cols=185  Identities=34%  Similarity=0.594  Sum_probs=164.2

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|++++|+         ..  +...+++...+..   +..|++|.+++++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---------~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~   70 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG---------DP--APALAEIARHGVKAVHHPADLSDVAQIEALF   70 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS---------CC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---------ch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            678999999999999999999999999999999872         22  2334445443332   356888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++...
T Consensus        71 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (255)
T 2q2v_A           71 ALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAA  150 (255)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchh
Confidence            99999999999999999988777888899999999999999999999999999999887799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |+++|+++++++++++.|++++||+||+|+||++ |++..
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  190 (255)
T 2q2v_A          151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ  190 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh
Confidence            9999999999999999999999999999999999 77644

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.3e-38  Score=249.56  Aligned_cols=180  Identities=22%  Similarity=0.304  Sum_probs=161.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.++++++++++.+.
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   71 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR---------RQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999987         666666655555333334567888888899999988888


Q ss_pred             cCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         90 FGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        90 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      ++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|++||
T Consensus        72 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  151 (248)
T 3asu_A           72 WCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATK  151 (248)
T ss_dssp             TCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHH
Confidence            999999999999863 5678889999999999999999999999999999887779999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                      +++++|+++|+.|++++||+||+|+||+|.
T Consensus       152 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~  181 (248)
T 3asu_A          152 AFVRQFSLNLRTDLHGTAVRVTDIEPGLVG  181 (248)
T ss_dssp             HHHHHHHHHHHHHTTTSCCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeccccc
Confidence            999999999999999999999999999994

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-38  Score=250.42  Aligned_cols=188  Identities=26%  Similarity=0.369  Sum_probs=168.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|.++++++++.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   73 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---------NEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAA   73 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS---------CHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987         55555555555522222356789999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+ |+||++||..+..+.++...|+
T Consensus        74 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~  152 (253)
T 1hxh_A           74 VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYS  152 (253)
T ss_dssp             HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHH
Confidence            999999999999999988777888999999999999999999999999999998877 9999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCC--CeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKN--NIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~--~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +||+++++|+++++.|++++  ||+||+|+||++ |++...
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~  193 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhh
Confidence            99999999999999999988  999999999999 776554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-38  Score=252.83  Aligned_cols=192  Identities=24%  Similarity=0.429  Sum_probs=166.2

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      |....++++|++|||||++|||+++|++|+++|++|++++|         +....+.+.+++.. ...+.+|++|.++++
T Consensus         1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~   70 (270)
T 1yde_A            1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---------DESGGRALEQELPG-AVFILCDVTQEDDVK   70 (270)
T ss_dssp             ---CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHCTT-EEEEECCTTSHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcC-CeEEEcCCCCHHHHH
Confidence            65556789999999999999999999999999999999987         55555444443321 234567999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|++. .|+||++||..+..+.+
T Consensus        71 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~  149 (270)
T 1yde_A           71 TLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQA  149 (270)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCC
Confidence            999999999999999999999865 3677889999999999999999999999999999765 48999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|+++|+++++++++++.|++++||+||+|+||++ |++...
T Consensus       150 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~  194 (270)
T 1yde_A          150 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE  194 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhh
Confidence            99999999999999999999999999999999999999 776543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=9.2e-39  Score=278.89  Aligned_cols=203  Identities=67%  Similarity=1.139  Sum_probs=162.5

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++||++|||||++|||+++|++|+++|++|++++|........++....+...+++...+.....|.+|..++++++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVI   93 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHH
Confidence            46789999999999999999999999999999999988554444445666777788888888888888999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||+....++.+.+.++|+.++++|+.+++.+++.++|+|++++.|+||++||.++..+.++...
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~  173 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVN  173 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChH
Confidence            99999999999999999998888899999999999999999999999999999999988899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccccCCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILP  206 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~~~~  206 (223)
                      |++||+|+.+|+++|+.|++++||+||+|+||.++++.....+
T Consensus       174 Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~~~  216 (613)
T 3oml_A          174 YTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGILP  216 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhccc
Confidence            9999999999999999999999999999999988877766544

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=8.5e-38  Score=250.61  Aligned_cols=187  Identities=16%  Similarity=0.168  Sum_probs=159.6

Q ss_pred             cccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C--CccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G--GKAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~   79 (223)
                      ..+++|++|||||+  +|||+++|++|+++|++|++++|         +....+. .+++.+. +  ..+.+|++|.+++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v   96 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ---------GDALKKR-VEPLAEELGAFVAGHCDVADAASI   96 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC---------SHHHHHH-HHHHHHHHTCEEEEECCTTCHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC---------CHHHHHH-HHHHHHhcCCceEEECCCCCHHHH
Confidence            45889999999999  55999999999999999999987         4322222 2222222 2  2345699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILR----DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      +++++++.++++++|+||||||...    ..++.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||..+.
T Consensus        97 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~  174 (293)
T 3grk_A           97 DAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAE  174 (293)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGT
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhc
Confidence            9999999999999999999999876    467889999999999999999999999999999976  4899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       175 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  223 (293)
T 3grk_A          175 KVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASG  223 (293)
T ss_dssp             SBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhc
Confidence            999999999999999999999999999999999999999999 766544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.7e-39  Score=255.95  Aligned_cols=190  Identities=28%  Similarity=0.393  Sum_probs=153.1

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      |..+++++|++|||||++|||+++|++|+++|++|++++|         +...   ..+++......+..|++|.++++.
T Consensus         2 p~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~---~~~~~~~~~~~~~~D~~~~~~v~~   69 (257)
T 3tl3_A            2 PGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---------RGED---VVADLGDRARFAAADVTDEAAVAS   69 (257)
T ss_dssp             --------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---------SCHH---HHHHTCTTEEEEECCTTCHHHHHH
T ss_pred             CCcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------chHH---HHHhcCCceEEEECCCCCHHHHHH
Confidence            4457789999999999999999999999999999999987         2221   222222233345679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh--------cCCCcEEEE
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDK----SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK--------QNYGRLVMT  149 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~g~iv~v  149 (223)
                      +++.+.+ ++++|+||||||.....    +..+.+.++|++++++|+.+++.+++.++|+|.+        ++.|+||++
T Consensus        70 ~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  148 (257)
T 3tl3_A           70 ALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINT  148 (257)
T ss_dssp             HHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEE
T ss_pred             HHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEE
Confidence            9988876 89999999999976432    2335889999999999999999999999999987        566899999


Q ss_pred             ecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        150 ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       150 sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ||..+..+.++...|++||+++++|+++|+.|++++||+||+|+||+| |++....
T Consensus       149 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  204 (257)
T 3tl3_A          149 ASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL  204 (257)
T ss_dssp             CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---
T ss_pred             cchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc
Confidence            999999999999999999999999999999999999999999999999 7776543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=8e-38  Score=247.46  Aligned_cols=190  Identities=17%  Similarity=0.156  Sum_probs=164.0

Q ss_pred             ccccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh----CCccccccCCcc
Q psy16220          4 QVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GGKAVPNYNSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   77 (223)
                      ++++++|++|||||+  +|||+++|++|+++|++|++++|         +....+...+.....    ...+.+|++|.+
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   72 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYA---------GERLEKSVHELAGTLDRNDSIILPCDVTNDA   72 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES---------SGGGHHHHHHHHHTSSSCCCEEEECCCSSSH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecC---------chHHHHHHHHHHHhcCCCCceEEeCCCCCHH
Confidence            357899999999999  67999999999999999999987         332222222222222    223467999999


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILR----DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      +++++++++.+.++++|+||||||...    ..++.+.+.++|+.++++|+.+++.+++.++|+|++  .|+||++||.+
T Consensus        73 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~  150 (266)
T 3oig_A           73 EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLG  150 (266)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGG
T ss_pred             HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEeccc
Confidence            999999999999999999999999876    467788999999999999999999999999999875  38999999999


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        154 GLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       154 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +..+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       151 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  202 (266)
T 3oig_A          151 GELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI  202 (266)
T ss_dssp             GTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC
T ss_pred             ccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc
Confidence            99999999999999999999999999999999999999999999 7666543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-38  Score=250.80  Aligned_cols=188  Identities=27%  Similarity=0.419  Sum_probs=157.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH------hCCccccccCCccch
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS------KGGKAVPNYNSVVDG   79 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~   79 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++..      ....+..|++|.+++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   73 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR---------HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ   73 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcccCCCceeEEecccCCHHHH
Confidence            578999999999999999999999999999999988         66666666666521      112345689999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCC----CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc-
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARI----SDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-  154 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-  154 (223)
                      +.+++++.++++++|+||||||.....++.+.    +.++|++++++|+.+++.+++.++|.|++.+ |+||++||..+ 
T Consensus        74 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~  152 (278)
T 1spx_A           74 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG  152 (278)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccc
Confidence            99999999999999999999998776777777    9999999999999999999999999998766 99999999998 


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..+.++...|++||++++.++++++.|++++||+||+|+||++ |++...
T Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          153 LHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             SSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccc
Confidence            8888999999999999999999999999999999999999999 776543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.8e-38  Score=274.92  Aligned_cols=189  Identities=48%  Similarity=0.874  Sum_probs=164.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   83 (223)
                      .+++||++|||||++|||+++|+.|+++|++|++.++.           ..+++.+++.+.+.......+|. .+.++++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~-----------~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~  386 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK-----------DATKTVDEIKAAGGEAWPDQHDVAKDSEAII  386 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS-----------CCHHHHHHHHHTTCEEEEECCCHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc-----------cHHHHHHHHHhcCCeEEEEEcChHHHHHHHH
Confidence            46889999999999999999999999999999998751           12344556655555555666677 7778889


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+++|++|+||||||+....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.++...
T Consensus       387 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~  466 (604)
T 2et6_A          387 KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQAN  466 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHH
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChh
Confidence            99999999999999999998778899999999999999999999999999999999887899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~~  204 (223)
                      |++||+|+.+|+++|+.|++++||+||+|+||.-|++....
T Consensus       467 Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~~T~m~~~~  507 (604)
T 2et6_A          467 YSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHAETAMTLSI  507 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCCC----
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCCCCcccccc
Confidence            99999999999999999999999999999999547765543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.8e-38  Score=251.24  Aligned_cols=193  Identities=25%  Similarity=0.387  Sum_probs=168.3

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      ...+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+.+|++|.+++++
T Consensus        23 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   93 (281)
T 3ppi_A           23 VTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADL---------AAEKGKALADELGNRAEFVSTNVTSEDSVLA   93 (281)
T ss_dssp             -CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCTTEEEEECCTTCHHHHHH
T ss_pred             hhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence            3456789999999999999999999999999999999988         6777777766664444456679999999999


Q ss_pred             HHHHHHHhcCCccEEEec-cCCCCCCCC-----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh------cCCCcEEEE
Q psy16220         82 IVQTALENFGRIDIVINN-AGILRDKSF-----ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK------QNYGRLVMT  149 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~g~iv~v  149 (223)
                      +++.+ ++++++|+|||| |+......+     .+.+.++|++++++|+.+++.+++.++|.+..      ++.|+||++
T Consensus        94 ~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  172 (281)
T 3ppi_A           94 AIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLT  172 (281)
T ss_dssp             HHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEE
T ss_pred             HHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEE
Confidence            99998 888999999999 555443333     46889999999999999999999999999986      456899999


Q ss_pred             ecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        150 ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       150 sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       173 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  228 (281)
T 3ppi_A          173 ASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV  228 (281)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT
T ss_pred             ecccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc
Confidence            999999999999999999999999999999999999999999999999 7776553

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=4.7e-38  Score=248.89  Aligned_cols=191  Identities=31%  Similarity=0.434  Sum_probs=165.8

Q ss_pred             cccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C---CccccccCCccc
Q psy16220          5 VRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G---GKAVPNYNSVVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~   78 (223)
                      +++++|++|||||+  +|||+++|++|+++|++|++++|+..        ...++..+++.+. +   ..+.+|++|.++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   87 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRA--------QGAEENVKELEKTYGIKAKAYKCQVDSYES   87 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSS--------SHHHHHHHHHHHHHCCCEECCBCCTTCHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcc--------hhHHHHHHHHHHhcCCceeEEecCCCCHHH
Confidence            56889999999999  99999999999999999999987321        2223334444322 2   245668899999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.
T Consensus        88 v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  167 (267)
T 3gdg_A           88 CEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN  167 (267)
T ss_dssp             HHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC
Confidence            99999999999999999999999988888899999999999999999999999999999998888999999999988776


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        159 --FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 --~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                        ++...|++||+++++|+++|+.|+++. |+||+|+||++ |++....
T Consensus       168 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~  215 (267)
T 3gdg_A          168 FPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV  215 (267)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC
Confidence              578999999999999999999999987 99999999999 7766543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-38  Score=252.26  Aligned_cols=186  Identities=33%  Similarity=0.523  Sum_probs=160.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|.++++.++++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   73 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDR---------EERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAE   73 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999988         55555554444322222345799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+| ++ .|+||++||..+. +.++...|+
T Consensus        74 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~  150 (263)
T 2a4k_A           74 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYA  150 (263)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHH
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHH
Confidence            99999999999999998877788899999999999999999999999999999 44 6899999999988 888889999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       151 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  189 (263)
T 2a4k_A          151 AGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG  189 (263)
T ss_dssp             HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence            99999999999999999999999999999999 777654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=7.5e-38  Score=247.83  Aligned_cols=191  Identities=31%  Similarity=0.466  Sum_probs=167.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      +.++.+|++|||||++|||+++|++|+++|++|+++++        ++....++..+++...+..   +.+|++|.++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~--------r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~   92 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYH--------RDAAGAQETLNAIVANGGNGRLLSFDVANREQCR   92 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--------SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC--------CchHHHHHHHHHHHhcCCceEEEEecCCCHHHHH
Confidence            45678999999999999999999999999999977653        2666677777777665543   345888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHH-hcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK-KQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+++.|. +.+.|+||++||..+..+.+
T Consensus        93 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  172 (267)
T 4iiu_A           93 EVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR  172 (267)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC
Confidence            99999999999999999999998888888999999999999999999999999999886 55678999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +...|++||+|+++|+++|+.|++++||+||+|+||+| |++..
T Consensus       173 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  216 (267)
T 4iiu_A          173 GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE  216 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccc
Confidence            99999999999999999999999999999999999999 77654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.5e-38  Score=252.33  Aligned_cols=188  Identities=21%  Similarity=0.295  Sum_probs=159.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCCh-hhhhHHHHHHH-HhCC---ccccccCC---
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSS-KAADTVVAEIR-SKGG---KAVPNYNS---   75 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~-~~~~~~~~~~~-~~~~---~~~~~~~~---   75 (223)
                      ..++++|++|||||++|||+++|++|+++|++|++++|         +. ...+++.+++. ..+.   .+.+|++|   
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r---------~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~   88 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYH---------NSAEAAVSLADELNKERSNTAVVCQADLTNSNV   88 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEES---------SCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTT
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeC---------CchHHHHHHHHHHHhhcCCceEEEEeecCCccC
Confidence            35678999999999999999999999999999999988         44 55556666665 2222   34568888   


Q ss_pred             -ccchHHHHHHHHHhcCCccEEEeccCCCCCCCC-----CC-----CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--
Q psy16220         76 -VVDGDKIVQTALENFGRIDIVINNAGILRDKSF-----AR-----ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--  142 (223)
Q Consensus        76 -~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--  142 (223)
                       ..+++.+++++.+.++++|+||||||.....++     .+     .+.++|++++++|+.+++.+++.++|+|.+.+  
T Consensus        89 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  168 (288)
T 2x9g_A           89 LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN  168 (288)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC------
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC
Confidence             788889999999999999999999998776666     56     88899999999999999999999999998765  


Q ss_pred             ----CCcEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        143 ----YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       143 ----~g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                          .|+||++||..+..+.++...|++||+++++|+++|+.|++++||+||+|+||+| |++
T Consensus       169 ~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          169 CTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             --CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             CCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence                6899999999999999999999999999999999999999999999999999999 776

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=7.9e-38  Score=244.62  Aligned_cols=178  Identities=17%  Similarity=0.121  Sum_probs=159.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-c--cCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVN-D--LGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|++|||||++|||+++|++|+++|++|+++ +  |         +....++..+++  .    ..++.|.++++.++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r---------~~~~~~~~~~~~--~----~~~~~~~~~v~~~~~~   65 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFA---------DAAERQRFESEN--P----GTIALAEQKPERLVDA   65 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG---------SHHHHHHHHHHS--T----TEEECCCCCGGGHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcC---------CHHHHHHHHHHh--C----CCcccCHHHHHHHHHH
Confidence            5799999999999999999999999999998 5  7         555555544443  1    1234488888999999


Q ss_pred             HHHhcCCccEEEeccCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         86 ALENFGRIDIVINNAGILRD---KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      +.+.++++|+||||||....   .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++..
T Consensus        66 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  145 (244)
T 1zmo_A           66 TLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNP  145 (244)
T ss_dssp             HGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCT
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCch
Confidence            99999999999999998877   788899999999999999999999999999999988779999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      .|++||+++++|+++|+.|++++||+||+|+||+| |++.
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            99999999999999999999999999999999999 7776

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=2.7e-38  Score=247.67  Aligned_cols=183  Identities=29%  Similarity=0.475  Sum_probs=155.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+....         +++.        .+.+|++|.+++++++
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------~~~~--------~~~~D~~~~~~~~~~~   72 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGLF--------GVEVDVTDSDAVDRAF   72 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------TTSE--------EEECCTTCHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---------HHhc--------CeeccCCCHHHHHHHH
Confidence            3467899999999999999999999999999999999853321         1100        1678999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++...
T Consensus        73 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  152 (247)
T 1uzm_A           73 TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQAN  152 (247)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChh
Confidence            99999999999999999988777888999999999999999999999999999999877799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |++||++++.|+++++.|++++||+||+|+||++ |++...
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  193 (247)
T 1uzm_A          153 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA  193 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh
Confidence            9999999999999999999999999999999999 776543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-38  Score=249.06  Aligned_cols=192  Identities=27%  Similarity=0.416  Sum_probs=162.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---CCccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   81 (223)
                      +++.+|++|||||++|||+++|++|+++|++|++++|+        +....+...+.+...   ...+.+|++|.+++++
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   74 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS--------DTTAMETMKETYKDVEERLQFVQADVTKKEDLHK   74 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC--------ChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            45678999999999999999999999999999998762        333334433333332   2344569999999999


Q ss_pred             HHHHHHHhcCCccEEEeccC--CCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC-cc-ccc
Q psy16220         82 IVQTALENFGRIDIVINNAG--ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SG-LLG  157 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~-~~-~~~  157 (223)
                      +++++.++++++|+||||||  .....++.+.+.++|++++++|+.+++.+++.++|+|++.+.++||++||. .+ ..+
T Consensus        75 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  154 (264)
T 3i4f_A           75 IVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG  154 (264)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC
T ss_pred             HHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC
Confidence            99999999999999999999  445577888999999999999999999999999999998888999999987 44 567


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .++...|++||+++++|+++|+.|++++||+||+|+||+| |++....
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  202 (264)
T 3i4f_A          155 WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT  202 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc
Confidence            7788999999999999999999999999999999999999 7776544

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.1e-38  Score=251.64  Aligned_cols=195  Identities=28%  Similarity=0.388  Sum_probs=164.5

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCC---CCChhhhhHHHHHHHHhCCc---cccccCCcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGD---GKSSKAADTVVAEIRSKGGK---AVPNYNSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   77 (223)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+......   .+.....++...++...+..   +.+|++|..
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            456899999999999999999999999999999999986432211   12245555555566554443   356888888


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++++++.++++++|+||||||.....  .+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||..+..+
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~  160 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTS--GASIITTGSVAGLIA  160 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc--CcEEEEeccchhccc
Confidence            89999999999999999999999987654  34788999999999999999999999999943  489999999888776


Q ss_pred             C-----------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        158 N-----------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       158 ~-----------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .           ++...|++||+++++|+++|+.|++++||+||+|+||+| |++..
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  217 (287)
T 3pxx_A          161 AAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN  217 (287)
T ss_dssp             HHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS
T ss_pred             ccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence            5           677899999999999999999999999999999999999 77764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=252.80  Aligned_cols=185  Identities=22%  Similarity=0.221  Sum_probs=164.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc-cCCCCCCCCCChhhhhHHHHHHH-HhCC---ccccccCCcc----
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVND-LGGQRDGDGKSSKAADTVVAEIR-SKGG---KAVPNYNSVV----   77 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~----   77 (223)
                      +++|++|||||++|||+++|+.|+++|++|++++ |         +....+++.+++. ..+.   .+.+|++|..    
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~  114 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR---------SAAEANALSATLNARRPNSAITVQADLSNVATAPV  114 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---------CHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccc
Confidence            7899999999999999999999999999999998 7         6666666666665 2222   3456999988    


Q ss_pred             -------------chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCC--------------HHHHHHHHHhhhhHHHHH
Q psy16220         78 -------------DGDKIVQTALENFGRIDIVINNAGILRDKSFARIS--------------DTDWQLVQDVHLTGAFRV  130 (223)
Q Consensus        78 -------------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l  130 (223)
                                   +++.+++++.+.++++|+||||||.....++.+.+              .++|+.++++|+.+++.+
T Consensus       115 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l  194 (328)
T 2qhx_A          115 SGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL  194 (328)
T ss_dssp             ------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHH
T ss_pred             cccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence                         89999999999999999999999988777788888              899999999999999999


Q ss_pred             HHHHHHHHHhcC------CCcEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        131 SRAAWPHMKKQN------YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       131 ~~~~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ++.++|+|.+.+      .|+||++||..+..+.++...|++||+++++|+++|+.|++++||+||+|+||+| |++
T Consensus       195 ~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          195 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             HHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            999999998776      6899999999999999999999999999999999999999999999999999999 776

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=9.3e-38  Score=245.05  Aligned_cols=183  Identities=28%  Similarity=0.446  Sum_probs=160.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|+...          +.    .  ....+..|++|.++++++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----------~~----~--~~~~~~~D~~d~~~~~~~~~   66 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQ----Y--PFATEVMDVADAAQVAQVCQ   66 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----------SC----C--SSEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----------hc----C--CceEEEcCCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999884321          00    0  01234568999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.++...|
T Consensus        67 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  146 (250)
T 2fwm_X           67 RLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAY  146 (250)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchH
Confidence            99999999999999999887778889999999999999999999999999999988777999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++.|+++++.|++++||+||+|+||++ |++...
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccc
Confidence            999999999999999999999999999999999 776554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.1e-37  Score=247.26  Aligned_cols=189  Identities=31%  Similarity=0.516  Sum_probs=164.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|+        .....+...+++...+..   +.+|++|..+++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   96 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN--------STESAEEVVAAIKKNGSDAACVKANVGVVEDIVR   96 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------chHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHH
Confidence            46789999999999999999999999999999999872        122344445556554433   4568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-  160 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.  +.|+||++||..+..+.++ 
T Consensus        97 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~  174 (283)
T 1g0o_A           97 MFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPK  174 (283)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSS
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCC
Confidence            9999999999999999999988777888899999999999999999999999999993  4589999999999887764 


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||+++++|+++++.|++++||+||+|+||+| |++...
T Consensus       175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  218 (283)
T 1g0o_A          175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA  218 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhh
Confidence            8999999999999999999999999999999999999 776543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=4.5e-38  Score=247.24  Aligned_cols=182  Identities=31%  Similarity=0.465  Sum_probs=156.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|+..+         .++        ...+.+|++|.++++++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---------~~~--------~~~~~~Dl~d~~~v~~~~~   79 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP---------PEG--------FLAVKCDITDTEQVEQAYK   79 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC---------CTT--------SEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh---------hcc--------ceEEEecCCCHHHHHHHHH
Confidence            56789999999999999999999999999999999884322         111        2345679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++...|
T Consensus        80 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (253)
T 2nm0_A           80 EIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANY  159 (253)
T ss_dssp             HHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHH
Confidence            99999999999999999887778888999999999999999999999999999998777999999999999888889999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++.|+++++.|++++||+||+|+||++ |++...
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  199 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV  199 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence            999999999999999999999999999999999 776553

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=4e-37  Score=241.68  Aligned_cols=190  Identities=28%  Similarity=0.369  Sum_probs=168.0

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC-CccccccCCccchHH
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG-GKAVPNYNSVVDGDK   81 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   81 (223)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.... ..+..|++|.+++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   75 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDR---------EAAALDRAAQELGAAVAARIVADVTDAEAMTA   75 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHGGGEEEEEECCTTCHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhcccceeEEEEecCCHHHHHH
Confidence            346688999999999999999999999999999999988         5555555555553332 345678888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+ ++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.++.
T Consensus        76 ~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  154 (254)
T 2wsb_A           76 AAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ  154 (254)
T ss_dssp             HHHHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS
T ss_pred             HHHHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC
Confidence            9998888 899999999999887778888999999999999999999999999999998877999999999998888877


Q ss_pred             --chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        162 --ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       162 --~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                        ..|+++|++++.++++++.|++++||++++|+||++ |++..
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~  198 (254)
T 2wsb_A          155 FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL  198 (254)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhh
Confidence              899999999999999999999999999999999999 76654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.1e-37  Score=242.67  Aligned_cols=189  Identities=25%  Similarity=0.365  Sum_probs=162.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+.   .+..|++|.++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGR---------HLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSL   72 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHH
Confidence            467899999999999999999999999999999987         66666666666665443   345688888889999


Q ss_pred             HHHHHHh-cCCccEEEeccC--CC-----CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         83 VQTALEN-FGRIDIVINNAG--IL-----RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        83 ~~~~~~~-~~~id~li~~ag--~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      ++.+.+. ++++|+||||||  ..     ...++.+.+.++|++++++|+.+++.+++.++|.|.+.+.|+||++||..+
T Consensus        73 ~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  152 (260)
T 2qq5_A           73 FEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS  152 (260)
T ss_dssp             HHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGG
T ss_pred             HHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhh
Confidence            9988876 899999999995  32     245777889999999999999999999999999998877799999999888


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..+. +...|++||+++++|+++|+.|++++||+||+|+||+| |++....
T Consensus       153 ~~~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  202 (260)
T 2qq5_A          153 LQYM-FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH  202 (260)
T ss_dssp             TSCC-SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---
T ss_pred             cCCC-CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh
Confidence            7654 46899999999999999999999999999999999999 8776543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=5.2e-37  Score=239.26  Aligned_cols=179  Identities=27%  Similarity=0.435  Sum_probs=159.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +|++|||||++|||+++|++|+++|++|++++|         +...   ..+++.  ...+..|++| .+++.+++++.+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r---------~~~~---~~~~~~--~~~~~~D~~~-~~~~~~~~~~~~   66 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASR---------NPEE---AAQSLG--AVPLPTDLEK-DDPKGLVKRALE   66 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SCHH---HHHHHT--CEEEECCTTT-SCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHH---HHHhhC--cEEEecCCch-HHHHHHHHHHHH
Confidence            689999999999999999999999999999988         3322   222331  2345668989 889999999999


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--CCCchhhh
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--FGQANYSA  166 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~--~~~~~y~~  166 (223)
                      .++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.  ++...|++
T Consensus        67 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  146 (239)
T 2ekp_A           67 ALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTT  146 (239)
T ss_dssp             HHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHH
Confidence            9999999999999887788889999999999999999999999999999998777999999999998887  88999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ||++++.++++++.|++++||+||+|+||++ |++..
T Consensus       147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  183 (239)
T 2ekp_A          147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL  183 (239)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh
Confidence            9999999999999999999999999999999 77654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5e-37  Score=242.82  Aligned_cols=193  Identities=25%  Similarity=0.390  Sum_probs=153.4

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccch
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDG   79 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   79 (223)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +..|+.|.+++
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   78 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR---------NEYELNECLSKWQKKGFQVTGSVCDASLRPER   78 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCeeEEEECCCCCHHHH
Confidence            346688999999999999999999999999999999987         666666666666654433   34588888888


Q ss_pred             HHHHHHHHHhc-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      +++++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.
T Consensus        79 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  158 (266)
T 1xq1_A           79 EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA  158 (266)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------
T ss_pred             HHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC
Confidence            89999998888 89999999999887778888999999999999999999999999999988777999999999999998


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++...|+++|++++.++++++.|++++||++++|+||++ +++....
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  205 (266)
T 1xq1_A          159 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV  205 (266)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh
Confidence            999999999999999999999999999999999999999 7765543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.7e-37  Score=246.89  Aligned_cols=185  Identities=23%  Similarity=0.249  Sum_probs=156.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCc----c
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSV----V   77 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~----~   77 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|.        +....+++.+++... +.   .+..|++|.    .
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   79 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRH--------SEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLD   79 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------ChHHHHHHHHHHHHhcCCceEEEeccCCCccccHH
Confidence            4789999999999999999999999999999999761        344455556666543 32   345699998    8


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHHHhcCC---
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISD-----------TDWQLVQDVHLTGAFRVSRAAWPHMKKQNY---  143 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---  143 (223)
                      +++.+++++.+.++++|+||||||.....++.+.+.           ++|++++++|+.+++.+++.++|+|. ++.   
T Consensus        80 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~  158 (276)
T 1mxh_A           80 CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWR  158 (276)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCC
Confidence            888999999999999999999999887777888888           99999999999999999999999997 444   


Q ss_pred             ---CcEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        144 ---GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       144 ---g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                         ++||++||..+..+.++...|++||+++++|+++|+.|++++||+||+|+||++ |+
T Consensus       159 ~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          159 SRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             CCCcEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence               899999999999999999999999999999999999999999999999999999 66

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=7.8e-38  Score=245.21  Aligned_cols=188  Identities=29%  Similarity=0.495  Sum_probs=143.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ..++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++........+|+.+..+++   
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---   76 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGS---------NEEKLKSLGNALKDNYTIEVCNLANKEECS---   76 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCSSEEEEECCTTSHHHHH---
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHhccCccEEEcCCCCHHHHH---
Confidence            35678999999999999999999999999999999987         666666666665433222333444444333   


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                       ++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...
T Consensus        77 -~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  155 (249)
T 3f9i_A           77 -NLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQAN  155 (249)
T ss_dssp             -HHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHH
T ss_pred             -HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCch
Confidence             3445568999999999988877788889999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |++||+|+++|+++++.|++++||+||+|+||+| |++....
T Consensus       156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  197 (249)
T 3f9i_A          156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL  197 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc
Confidence            9999999999999999999999999999999999 7765543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.9e-37  Score=244.74  Aligned_cols=186  Identities=11%  Similarity=0.147  Sum_probs=162.1

Q ss_pred             ccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---CCccccccCCccchH
Q psy16220          6 RFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPNYNSVVDGD   80 (223)
Q Consensus         6 ~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   80 (223)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+         .. .++..+++...   ...+.+|++|.++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~---------~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN---------ES-LEKRVRPIAQELNSPYVYELDVSKEEHFK   72 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESS---------TT-THHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCC---------HH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHH
Confidence            4789999999999  999999999999999999999883         22 22233334332   234467999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+++++.+.++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+..
T Consensus        73 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~isS~~~~~  150 (275)
T 2pd4_A           73 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG--ASVLTLSYLGSTK  150 (275)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTS
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--CEEEEEecchhcC
Confidence            9999999999999999999998754    577789999999999999999999999999999753  8999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+| |++...
T Consensus       151 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  198 (275)
T 2pd4_A          151 YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG  198 (275)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh
Confidence            99999999999999999999999999999999999999999 776544

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.6e-37  Score=244.14  Aligned_cols=191  Identities=30%  Similarity=0.374  Sum_probs=162.7

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|.++++.++
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDL---------PNSGGEAQAKKLGNNCVFAPADVTSEKDVQTAL   77 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC---------TTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------CcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHH
Confidence            35688999999999999999999999999999999988         333344444444322334567999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCC------CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CCCcEEEEec
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFA------RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTAS  151 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~vsS  151 (223)
                      +++.++++++|+||||||.....++.      +.+.++|++++++|+.+++.+++.++|.|.++      +.++||++||
T Consensus        78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS  157 (265)
T 2o23_A           78 ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  157 (265)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             HHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence            99999999999999999987655444      37889999999999999999999999999876      5689999999


Q ss_pred             CcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        152 NSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..+..+.++...|+++|++++.++++++.|++++||+||+|+||++ |++...
T Consensus       158 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          158 VAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             THHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred             hhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence            9999999999999999999999999999999999999999999999 776554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-37  Score=244.76  Aligned_cols=191  Identities=14%  Similarity=0.150  Sum_probs=159.6

Q ss_pred             ccccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHH
Q psy16220          4 QVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         4 ~~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      ...+++|++|||||+  +|||+++|++|+++|++|++++|+.      +.....++..++.. ....+.+|++|.++++.
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~   81 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD------RFKDRITEFAAEFG-SELVFPCDVADDAQIDA   81 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG------GGHHHHHHHHHHTT-CCCEEECCTTCHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch------hhHHHHHHHHHHcC-CcEEEECCCCCHHHHHH
Confidence            456789999999999  9999999999999999999998831      11222222222211 12345679999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD----KSFAR-ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      +++++.++++++|+||||||....    .++.+ .+.++|++++++|+.+++.+++.++|+|++.  |+||++||.++..
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~  159 (271)
T 3ek2_A           82 LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDD--ASLLTLSYLGAER  159 (271)
T ss_dssp             HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEE--EEEEEEECGGGTS
T ss_pred             HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccC--ceEEEEecccccc
Confidence            999999999999999999998764    55565 8999999999999999999999999998753  8999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++...
T Consensus       160 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  207 (271)
T 3ek2_A          160 AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG  207 (271)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC
T ss_pred             CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc
Confidence            99999999999999999999999999999999999999999 766544

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=3.3e-37  Score=243.73  Aligned_cols=181  Identities=23%  Similarity=0.385  Sum_probs=162.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|+...                 ......+..|++|.++++.+++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~~Dl~~~~~v~~~~~   66 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------------EAKYDHIECDVTNPDQVKASID   66 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------------SCSSEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------------CCceEEEEecCCCHHHHHHHHH
Confidence            35789999999999999999999999999999999884321                 0112234679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||.++..+.++...|
T Consensus        67 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  146 (264)
T 2dtx_A           67 HIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAY  146 (264)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhH
Confidence            99999999999999999887788889999999999999999999999999999998777999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++||++++.|+++++.|+++. |+||+|+||++ |++...
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~  185 (264)
T 2dtx_A          147 VTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRK  185 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhh
Confidence            999999999999999999988 99999999999 776543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-37  Score=247.38  Aligned_cols=189  Identities=20%  Similarity=0.261  Sum_probs=161.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccCCc-cch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYNSV-VDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~   79 (223)
                      ..+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+.+.    .+.+|++|. .++
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v   78 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCR---------DVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATM   78 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHH
Confidence            3467999999999999999999999999999999988         77777777777776543    245688887 888


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCC------------------------------CCCCCCCHHHHHHHHHhhhhHHHH
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRD------------------------------KSFARISDTDWQLVQDVHLTGAFR  129 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~  129 (223)
                      +.+++.+.+.++++|+||||||....                              .++.+.+.++|++++++|+.+++.
T Consensus        79 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  158 (311)
T 3o26_A           79 SSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKS  158 (311)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHH
Confidence            99999999999999999999998642                              245567899999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEecCcccccC-------------------------------------------CCCchhhh
Q psy16220        130 VSRAAWPHMKKQNYGRLVMTASNSGLLGN-------------------------------------------FGQANYSA  166 (223)
Q Consensus       130 l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------------------------------------------~~~~~y~~  166 (223)
                      +++.++|+|++.+.++||++||.++..+.                                           ++...|++
T Consensus       159 l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  238 (311)
T 3o26_A          159 VTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTT  238 (311)
T ss_dssp             HHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHH
T ss_pred             HHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHH
Confidence            99999999998888999999999887654                                           45678999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ||+++++|+++|+.|+++  |+||+|+||+| |++....
T Consensus       239 SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~  275 (311)
T 3o26_A          239 SKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGI  275 (311)
T ss_dssp             HHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCC
Confidence            999999999999999864  99999999999 8776543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=6.4e-37  Score=243.07  Aligned_cols=188  Identities=28%  Similarity=0.380  Sum_probs=161.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   84 (223)
                      ++|++|||||++|||+++|++|+++|++|+++++        ++....+...+++...+..   +.+|++|..+++.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   96 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYA--------ANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFS   96 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--------SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC--------CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            5789999999999999999999999999988732        2666667777777665443   3558888888999999


Q ss_pred             HHHHhcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc---CCCcEEEEecCcccccCC-
Q psy16220         85 TALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ---NYGRLVMTASNSGLLGNF-  159 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~vsS~~~~~~~~-  159 (223)
                      ++.+.++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|.+.   +.|+||++||.++..+.+ 
T Consensus        97 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  176 (272)
T 4e3z_A           97 AVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT  176 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC
Confidence            999999999999999998764 778889999999999999999999999999999763   458999999999988776 


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|++||+++++|+++|+.|++++||+|++|+||+| |++...
T Consensus       177 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          177 QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence            67889999999999999999999999999999999999 777654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=7.9e-37  Score=240.30  Aligned_cols=176  Identities=23%  Similarity=0.255  Sum_probs=156.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||+++|++|+++|++|++++|         +....+...+ +...+..+...  |.++++++++++.+.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~-l~~~~~~~~~~--d~~~v~~~~~~~~~~   69 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDE---------SFKQKDELEA-FAETYPQLKPM--SEQEPAELIEAVTSA   69 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCG---------GGGSHHHHHH-HHHHCTTSEEC--CCCSHHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHH-HHhcCCcEEEE--CHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999987         4444444433 54444333222  888899999999999


Q ss_pred             cCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         90 FGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        90 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      ++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++...|++||
T Consensus        70 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  149 (254)
T 1zmt_A           70 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSAR  149 (254)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHH
T ss_pred             hCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHH
Confidence            99999999999987 66788899999999999999999999999999999887779999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +++++|+++++.|++++||+||+|+||+|
T Consensus       150 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v  178 (254)
T 1zmt_A          150 AGACTLANALSKELGEYNIPVFAIGPNYL  178 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence            99999999999999999999999999999

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1e-36  Score=236.94  Aligned_cols=186  Identities=23%  Similarity=0.332  Sum_probs=162.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH-HhCCc---cccccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      ++|++|||||++|||+++|++|+++|++|++++|         +....++..+++. ..+..   +.+|++|.++++.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   71 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGAR---------SVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFS   71 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHH
Confidence            3689999999999999999999999999999988         6677777666665 33333   346888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++. .+++|++||..+..+.++...
T Consensus        72 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~  150 (235)
T 3l77_A           72 KKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGG  150 (235)
T ss_dssp             C-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCTTCHH
T ss_pred             HHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCCCcch
Confidence            9999999999999999999888889999999999999999999999999999999544 489999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |+++|+++++|+++++.+  ++||+||+|+||+| |++.....
T Consensus       151 Y~~sKaa~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~  191 (235)
T 3l77_A          151 YVSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKP  191 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhc--CCCeEEEEEeCCccccccccccC
Confidence            999999999999999554  77999999999999 77765544

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.3e-37  Score=243.35  Aligned_cols=188  Identities=19%  Similarity=0.215  Sum_probs=162.2

Q ss_pred             ccccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---CCccccccCCccc
Q psy16220          4 QVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPNYNSVVD   78 (223)
Q Consensus         4 ~~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   78 (223)
                      .+++++|++|||||+  +|||+++|++|+++|++|++++|         +.. .++..+++.+.   ...+..|++|.++
T Consensus         3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r---------~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~   72 (261)
T 2wyu_A            3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ---------AER-LRPEAEKLAEALGGALLFRADVTQDEE   72 (261)
T ss_dssp             EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEES---------CGG-GHHHHHHHHHHTTCCEEEECCTTCHHH
T ss_pred             ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC---------CHH-HHHHHHHHHHhcCCcEEEECCCCCHHH
Confidence            346789999999999  99999999999999999999987         332 22233344332   1234568999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      ++.+++++.+.++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+
T Consensus        73 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~isS~~~  150 (261)
T 2wyu_A           73 LDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYAS  150 (261)
T ss_dssp             HHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC--CEEEEEecccc
Confidence            999999999999999999999998753    677889999999999999999999999999998753  89999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..+.++...|++||++++.++++++.|++++||+||+|+||+| |++...
T Consensus       151 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  200 (261)
T 2wyu_A          151 EKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS  200 (261)
T ss_dssp             TSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh
Confidence            9999999999999999999999999999999999999999999 766543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=9.2e-37  Score=243.16  Aligned_cols=188  Identities=11%  Similarity=0.121  Sum_probs=163.2

Q ss_pred             cccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   79 (223)
                      ..+++|++|||||+  +|||+++|++|+++|++|++++|+         .  .++..+++.+...   .+.+|++|.+++
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~---------~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v   90 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVG---------Q--FKDRVEKLCAEFNPAAVLPCDVISDQEI   90 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECT---------T--CHHHHHHHHGGGCCSEEEECCTTCHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCc---------h--HHHHHHHHHHhcCCceEEEeecCCHHHH
Confidence            46789999999988  789999999999999999999883         2  2233344443332   345689999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCC----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRD----KSFAR-ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      +++++++.+.++++|+||||||....    .++.+ .+.++|++++++|+.+++.+++.++|+|.++ .|+||++||.++
T Consensus        91 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~  169 (280)
T 3nrc_A           91 KDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGA  169 (280)
T ss_dssp             HHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGG
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecccc
Confidence            99999999999999999999998754    44455 8999999999999999999999999999866 599999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..+.++...|++||+|+++|+++|+.|++++||+||+|+||+| |++....
T Consensus       170 ~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  220 (280)
T 3nrc_A          170 EKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI  220 (280)
T ss_dssp             TSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC
T ss_pred             ccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC
Confidence            9999999999999999999999999999999999999999999 7776544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=7.3e-37  Score=237.54  Aligned_cols=186  Identities=26%  Similarity=0.359  Sum_probs=159.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ..+|++|||||++|||++++++|+++|++|++++|         +....+...+++. ....+..|++|.++++++++.+
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   72 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMAR---------DEKRLQALAAELE-GALPLPGDVREEGDWARAVAAM   72 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999987         5555544444332 2334567899999999999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|++
T Consensus        73 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  152 (234)
T 2ehd_A           73 EEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNA  152 (234)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhH
Confidence            99999999999999988777888899999999999999999999999999999887799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +|++++.++++++.|++++||++++|+||++ |++..
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  189 (234)
T 2ehd_A          153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG  189 (234)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEECC--------
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc
Confidence            9999999999999999999999999999999 76654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4e-37  Score=242.61  Aligned_cols=187  Identities=20%  Similarity=0.223  Sum_probs=163.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHH---cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CC---ccccccCCcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAE---RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GG---KAVPNYNSVV   77 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~---~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~   77 (223)
                      ++++|++|||||++|||+++|++|++   +|++|++++|         +....++..+++...  +.   .+.+|++|.+
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~   73 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR---------SESMLRQLKEELGAQQPDLKVVLAAADLGTEA   73 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES---------CHHHHHHHHHHHHHHCTTSEEEEEECCTTSHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeC---------CHHHHHHHHHHHHhhCCCCeEEEEecCCCCHH
Confidence            57899999999999999999999999   8999999988         666677777777653  22   3456888888


Q ss_pred             chHHHHHHHHH--hcCCcc--EEEeccCCCCC--CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCCcEEE
Q psy16220         78 DGDKIVQTALE--NFGRID--IVINNAGILRD--KSFAR-ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ--NYGRLVM  148 (223)
Q Consensus        78 ~~~~~~~~~~~--~~~~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~  148 (223)
                      +++++++++.+  .++++|  +||||||....  .++.+ .+.++|++++++|+.+++.+++.++|+|+++  +.|+||+
T Consensus        74 ~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~  153 (259)
T 1oaa_A           74 GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVN  153 (259)
T ss_dssp             HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEE
Confidence            89999999988  678899  99999998643  45677 7899999999999999999999999999876  5689999


Q ss_pred             EecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        149 TASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       149 vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +||.++..+.++...|++||+++++|+++|+.|+++  |+||+|+||++ |++...
T Consensus       154 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~  207 (259)
T 1oaa_A          154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHH
T ss_pred             EcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHH
Confidence            999999999999999999999999999999999974  99999999999 777553

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.5e-37  Score=246.38  Aligned_cols=186  Identities=16%  Similarity=0.188  Sum_probs=160.0

Q ss_pred             ccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhh-hhHHHHHHHHhCCccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKA-ADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|         +... .+++.+++......+.+|++|.++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF---------DRLRLIQRITDRLPAKAPLLELDVQNEEHLASL   74 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEEC---------SCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEec---------ChHHHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence            578999999999  999999999999999999999987         3322 2333322222233456799999999999


Q ss_pred             HHHHHHhcC---CccEEEeccCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         83 VQTALENFG---RIDIVINNAGILR-----DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        83 ~~~~~~~~~---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      ++++.+.++   ++|+||||||...     ..++.+.+.++|++++++|+.+++.+++.++|+|.+.  |+||++||..+
T Consensus        75 ~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~  152 (269)
T 2h7i_A           75 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS  152 (269)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS
T ss_pred             HHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc
Confidence            999999999   9999999999876     4677889999999999999999999999999999764  89999999776


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                       .+.++...|++||+++++|+++++.|++++||+||+|+||++ |++...
T Consensus       153 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  201 (269)
T 2h7i_A          153 -RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSA  201 (269)
T ss_dssp             -SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHH
T ss_pred             -cccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhc
Confidence             677889999999999999999999999999999999999999 776543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-36  Score=235.70  Aligned_cols=186  Identities=23%  Similarity=0.420  Sum_probs=167.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVD   78 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   78 (223)
                      +|++|||||++|||+++|++|+++|+       +|++++|         +....+.+.+++...+.   .+..|++|..+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   72 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR---------TAADLEKISLECRAEGALTDTITADISDMAD   72 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES---------CHHHHHHHHHHHHTTTCEEEEEECCTTSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC---------CHHHHHHHHHHHHccCCeeeEEEecCCCHHH
Confidence            68999999999999999999999999       9999987         66666666666654433   34568888888


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                      ++.+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+.++||++||..+..+.
T Consensus        73 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (244)
T 2bd0_A           73 VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF  152 (244)
T ss_dssp             HHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC
Confidence            99999999999999999999999887778888999999999999999999999999999988777999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|+++|++++.++++++.|++++||++++|+||++ |++...
T Consensus       153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  198 (244)
T 2bd0_A          153 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK  198 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh
Confidence            999999999999999999999999999999999999999 776654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=7.2e-37  Score=239.33  Aligned_cols=191  Identities=36%  Similarity=0.547  Sum_probs=169.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCC---ccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGG---KAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~   79 (223)
                      ++++++|++|||||++|||++++++|+++|++|++++|         +....+...+++.+ .+.   .+..|+.|.+++
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   72 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGT---------SGERAKAVAEEIANKYGVKAHGVEMNLLSEESI   72 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHhhcCCceEEEEccCCCHHHH
Confidence            35688999999999999999999999999999999987         55556665555544 222   245688888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++++++.+.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+
T Consensus        73 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  152 (248)
T 2pnf_A           73 NKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV  152 (248)
T ss_dssp             HHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC
Confidence            99999999999999999999998877778889999999999999999999999999999887779999999998888889


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|+++|++++.++++++.|++++||++++|.||++ +++...
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  197 (248)
T 2pnf_A          153 GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV  197 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence            99999999999999999999999999999999999999 766543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.6e-36  Score=242.31  Aligned_cols=185  Identities=17%  Similarity=0.184  Sum_probs=161.1

Q ss_pred             cCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---CCccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   81 (223)
                      +++|++|||||+  +|||+++|++|+++|++|++++|         +.. .++..+++...   ...+..|++|..+++.
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r---------~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   88 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYA---------TPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKN   88 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEES---------SGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC---------CHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence            789999999999  99999999999999999999987         332 22333444332   2334569999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++.+.++++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|.++ .|+||++||..+..+
T Consensus        89 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~  167 (285)
T 2p91_A           89 LKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKV  167 (285)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSB
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccC
Confidence            999999999999999999998754    567789999999999999999999999999999754 489999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .++...|++||+++++++++++.|++++||+||+|+||+| |++..
T Consensus       168 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  213 (285)
T 2p91_A          168 VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAY  213 (285)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC-
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhh
Confidence            9999999999999999999999999999999999999999 76644

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3e-36  Score=237.42  Aligned_cols=190  Identities=33%  Similarity=0.466  Sum_probs=168.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|         +....+...+++...+..   +..|++|.++++
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~   78 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADL---------DEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQ   78 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhcCCceEEEEecCCCHHHHH
Confidence            35688999999999999999999999999999999987         566666666666654433   456888888889


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      .+++++.++++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.+.|.|.+.+.++||++||..+..+.+
T Consensus        79 ~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  158 (260)
T 3awd_A           79 NAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNR  158 (260)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCC
Confidence            999999999999999999999876 6778889999999999999999999999999999887779999999999988877


Q ss_pred             CC--chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQ--ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~--~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +.  ..|+++|++++.++++++.|++++||++++|+||++ +++..
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          159 PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence            77  899999999999999999999999999999999999 76654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=6e-37  Score=242.39  Aligned_cols=185  Identities=11%  Similarity=0.113  Sum_probs=160.1

Q ss_pred             cCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---CCccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   81 (223)
                      +++|++|||||+  +|||+++|++|+++|++|++++|+         . ..++..+++...   ...+..|++|.+++++
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~---------~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~   76 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN---------D-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDT   76 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS---------T-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCc---------H-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence            789999999999  999999999999999999999883         2 122233333332   1245669999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD----KSFAR-ISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      +++++.++++++|+||||||....    .++.+ .+.++|++++++|+.+++.+++.++|+|.+.  |+||++||..+..
T Consensus        77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~isS~~~~~  154 (265)
T 1qsg_A           77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAER  154 (265)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--CEEEEEcchhhcc
Confidence            999999999999999999998653    56667 8999999999999999999999999998753  8999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        157 GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +.++...|++||++++.++++++.|++++||+||+|+||+| |++...
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  202 (265)
T 1qsg_A          155 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG  202 (265)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc
Confidence            99999999999999999999999999999999999999999 776543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-37  Score=242.02  Aligned_cols=182  Identities=23%  Similarity=0.419  Sum_probs=154.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....+++. ++. ....+..|++|.++++    +
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~----~   67 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI---------NESKLQELE-KYP-GIQTRVLDVTKKKQID----Q   67 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHGGGG-GST-TEEEEECCTTCHHHHH----H
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHH-hcc-CceEEEeeCCCHHHHH----H
Confidence            578999999999999999999999999999999987         444433322 111 1122344666555444    5


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-CCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~~~y  164 (223)
                      +.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.+.|+||++||..+..+.+ +...|
T Consensus        68 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  147 (246)
T 2ag5_A           68 FANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVY  147 (246)
T ss_dssp             HHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHH
T ss_pred             HHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccH
Confidence            66678999999999998877788889999999999999999999999999999887779999999999988888 89999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++||++++.++++++.|++++||+||+|+||++ |++..
T Consensus       148 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  186 (246)
T 2ag5_A          148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ  186 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchh
Confidence            999999999999999999999999999999999 77644

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4e-37  Score=241.90  Aligned_cols=190  Identities=26%  Similarity=0.372  Sum_probs=165.8

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   83 (223)
                      +++|++|||||++|||+++|++|+++|++|+++++        ++....++..+++...+..+   ..|+.|..+++.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   76 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYG--------NRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALY   76 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES--------SCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC--------CchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHH
Confidence            68999999999999999999999999999988643        25556666677776655443   45888888888888


Q ss_pred             HHHHHhcC------CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         84 QTALENFG------RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        84 ~~~~~~~~------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++.+.++      ++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.  ++||++||.++..+
T Consensus        77 ~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~iv~isS~~~~~~  154 (255)
T 3icc_A           77 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRIS  154 (255)
T ss_dssp             HHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGTSC
T ss_pred             HHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC--CEEEEeCChhhccC
Confidence            88877663      59999999999887888899999999999999999999999999998543  79999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      .++...|++||+++++|+++|+.|++++||+||+|+||++ |++..+...
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  204 (255)
T 3icc_A          155 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS  204 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT
T ss_pred             CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc
Confidence            9999999999999999999999999999999999999999 877766543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-36  Score=241.87  Aligned_cols=189  Identities=24%  Similarity=0.363  Sum_probs=168.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +..|++|.++++
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~   96 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI---------NKHGLEETAAKCKGLGAKVHTFVVDCSNREDIY   96 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEc---------CHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHH
Confidence            45688999999999999999999999999999999988         666666666666654433   356888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      .+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus        97 ~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  176 (272)
T 1yb1_A           97 SSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF  176 (272)
T ss_dssp             HHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH
T ss_pred             HHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC
Confidence            99999999999999999999988777788888999999999999999999999999999887799999999999988888


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhC---CCCeEEEEEeCCCc-cccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGE---KNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ...|+++|++++.++++++.|++   +.||+|++|+||++ |++.
T Consensus       177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~  221 (272)
T 1yb1_A          177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI  221 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcc
Confidence            99999999999999999999996   67999999999999 7764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.8e-37  Score=238.67  Aligned_cols=183  Identities=20%  Similarity=0.214  Sum_probs=151.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|..+++.+++++.+ 
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGR---------SESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS-   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEES---------CHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS-
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh-
Confidence            58999999999999999999999999999988         66666665555533333445577776666666655433 


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                        .+|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++ ++||++||..+..+.++...|++||+
T Consensus        72 --~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKa  148 (230)
T 3guy_A           72 --IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKW  148 (230)
T ss_dssp             --CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             --cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHH
Confidence              349999999998888889999999999999999999999999999998765 59999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ++++|+++|+.|++++||+||+|+||++ |++.....
T Consensus       149 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  185 (230)
T 3guy_A          149 AVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG  185 (230)
T ss_dssp             HHHHHHHHHHHHTTTSSCEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC
Confidence            9999999999999999999999999999 87766543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=239.78  Aligned_cols=190  Identities=31%  Similarity=0.516  Sum_probs=164.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC----------CccccccC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG----------GKAVPNYN   74 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~   74 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+          ..+..|++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   73 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDL---------DRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVS   73 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHTC------------CCEEEECCTT
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHhcCccccccCcceEEEEecCC
Confidence            4578999999999999999999999999999999987         5555555544443222          23456888


Q ss_pred             CccchHHHHHHHHHhcCCc-cEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecC
Q psy16220         75 SVVDGDKIVQTALENFGRI-DIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASN  152 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~  152 (223)
                      |..+++.+++.+.+.++++ |+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+ .|+||++||.
T Consensus        74 ~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  153 (264)
T 2pd6_A           74 EARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSI  153 (264)
T ss_dssp             SHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECCh
Confidence            8888999999999999999 9999999988777888899999999999999999999999999998765 6899999999


Q ss_pred             cccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        153 SGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       153 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .+..+.++...|+++|++++.++++++.|++++||++++|+||++ |++...
T Consensus       154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          154 VGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred             hhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence            999999999999999999999999999999999999999999999 766543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.9e-36  Score=237.43  Aligned_cols=189  Identities=24%  Similarity=0.408  Sum_probs=167.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++..  ....+..|++|.++++.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR---------HSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHH
Confidence            578999999999999999999999999999999987         55555555555432  1223456888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~  162 (223)
                      +.+.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+. ++||++||..+..+.++..
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  153 (251)
T 1zk4_A           74 DATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLG  153 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCc
Confidence            999999999999999999887778888999999999999999999999999999988776 8999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|+++|++++.++++++.|++  ++||++++|+||++ |++...
T Consensus       154 ~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~  197 (251)
T 1zk4_A          154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD  197 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT
T ss_pred             cchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh
Confidence            999999999999999999988  89999999999999 776654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.1e-36  Score=236.07  Aligned_cols=186  Identities=29%  Similarity=0.429  Sum_probs=164.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH-HH---hCCccccccCCccchHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RS---KGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +|++|||||++|||+++|++|+++|++|++++|         +....++..+++ ..   ....+..|++|.++++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDL---------SAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIA   72 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            689999999999999999999999999999987         555555555555 22   22234568889889999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCC---CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         85 TALENFGRIDIVINNAGILRDKS---FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++.+.++++|+||||||.....+   +.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.++.
T Consensus        73 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  152 (250)
T 2cfc_A           73 ATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGR  152 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCc
Confidence            99999999999999999876555   778899999999999999999999999999998777999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+++|++++.++++++.|++++||++++|+||++ |++...
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (250)
T 2cfc_A          153 SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW  195 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc
Confidence            999999999999999999999999999999999999 766543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=5.1e-36  Score=236.33  Aligned_cols=191  Identities=31%  Similarity=0.447  Sum_probs=167.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      .++++|++|||||++|||++++++|+++|++|++++|+        +....++..+++...+.   .+..|++|.+++++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~--------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   74 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--------KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVIN   74 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCC--------ChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            35789999999999999999999999999999999762        33445555556654433   24568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+ .++||++||..+..+.++
T Consensus        75 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  154 (261)
T 1gee_A           75 LVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL  154 (261)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC
Confidence            9999999999999999999988777788899999999999999999999999999998866 689999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|+++|++++.++++++.|++++||++++|+||++ |++...
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  198 (261)
T 1gee_A          155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh
Confidence            9999999999999999999999999999999999999 776543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.4e-36  Score=237.63  Aligned_cols=190  Identities=35%  Similarity=0.603  Sum_probs=145.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||+++|++|+++|++|+++++.        +....++..+++...+..   +..|++|..+++.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP--------ASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENM   73 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECT--------TCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc--------CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4789999999999999999999999999999998431        334445555556544433   35688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++..
T Consensus        74 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  153 (247)
T 2hq1_A           74 VKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQA  153 (247)
T ss_dssp             HHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CH
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCc
Confidence            99999999999999999998776777888899999999999999999999999999887779999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .|+++|++++.++++++.|++++||++|+|.||++ |++...
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence            99999999999999999999999999999999999 765543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=6.9e-36  Score=234.64  Aligned_cols=191  Identities=31%  Similarity=0.488  Sum_probs=168.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||++++++|+++|++|++++|         +....+...+++...+..   +..|++|.++++
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   76 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVDEIQQLGGQAFACRCDITSEQELS   76 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHH
Confidence            45678999999999999999999999999999999987         666666666666654433   346888888889


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      .+++++.++++++|+||||||.....++ +.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus        77 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  155 (255)
T 1fmc_A           77 ALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN  155 (255)
T ss_dssp             HHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC
Confidence            9999999999999999999998766665 788999999999999999999999999998877799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ...|+++|++++.++++++.|++++||++++|.||.+ |++....
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~  200 (255)
T 1fmc_A          156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc
Confidence            9999999999999999999999999999999999999 7665543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-36  Score=240.19  Aligned_cols=190  Identities=34%  Similarity=0.540  Sum_probs=167.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      ..+++|++|||||++|||+++|++|+++|++|++++|         +....++..+++...+..   +..|++|.+++++
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~  110 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISR---------TQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISE  110 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES---------SHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcC---------CHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHH
Confidence            4577899999999999999999999999999999876         666666666666654433   3568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.++.
T Consensus       111 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  190 (285)
T 2c07_A          111 VINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ  190 (285)
T ss_dssp             HHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC
Confidence            99999999999999999999887778889999999999999999999999999999988777999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..|+++|++++.++++++.|+++.||+|++|+||++ |++...
T Consensus       191 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  233 (285)
T 2c07_A          191 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK  233 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence            999999999999999999999999999999999999 776543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5.5e-36  Score=238.11  Aligned_cols=192  Identities=30%  Similarity=0.425  Sum_probs=166.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   81 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|         +....+...+++..  ....+..|++|.++++.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   81 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI---------ADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRN   81 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC---------ChhHHHHHHHHhCCCCceEEEECCCCCHHHHHH
Confidence            35678999999999999999999999999999999987         55555454444432  12234568899999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++++.+.++++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.+
T Consensus        82 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  161 (278)
T 2bgk_A           82 LVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE  161 (278)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT
T ss_pred             HHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC
Confidence            999999999999999999997643  567888999999999999999999999999999987779999999999988888


Q ss_pred             -CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        160 -GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       160 -~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                       +...|+++|++++.++++++.|++++||++++|+||++ +++....
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (278)
T 2bgk_A          162 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV  208 (278)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh
Confidence             78899999999999999999999999999999999999 7765543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.2e-36  Score=237.21  Aligned_cols=189  Identities=27%  Similarity=0.346  Sum_probs=167.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   79 (223)
                      .++++|++|||||++|||+++|++|+++|++|++++|         +....+++.+++...+.     .+..|++|.+++
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   98 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCAR---------TVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI   98 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC---------ChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHH
Confidence            3578999999999999999999999999999999987         66666666667765432     245688888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC--CcEEEEecCccc--
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSGL--  155 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~vsS~~~~--  155 (223)
                      +.+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.  ++||++||..+.  
T Consensus        99 ~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  178 (279)
T 1xg5_A           99 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  178 (279)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc
Confidence            9999999999999999999999887778888999999999999999999999999999988764  899999999887  


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+.++...|+++|++++.|+++++.|++  +.||++++|+||+| |++..
T Consensus       179 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  228 (279)
T 1xg5_A          179 LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF  228 (279)
T ss_dssp             CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh
Confidence            5777889999999999999999999998  88999999999999 77643

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.1e-36  Score=255.31  Aligned_cols=191  Identities=31%  Similarity=0.487  Sum_probs=164.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+       .......+..++.  ....+.+|++|.++++.+++
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~-------~~~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~  279 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD-------GAAEDLKRVADKV--GGTALTLDVTADDAVDKITA  279 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECG-------GGHHHHHHHHHHH--TCEEEECCTTSTTHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCC-------ccHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHH
Confidence            34689999999999999999999999999999999872       1122233333332  22345679999999999999


Q ss_pred             HHHHhcCC-ccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGR-IDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++.+++++ +|+||||||....+++.+.+.++|+.++++|+.+++++++.+.|.|..++.++||++||.++..+.+++..
T Consensus       280 ~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~  359 (454)
T 3u0b_A          280 HVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTN  359 (454)
T ss_dssp             HHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHH
Confidence            99999976 99999999999888899999999999999999999999999999998877899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      |+++|+++++|+++|+.|++++||+||+|+||+| |++....
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc
Confidence            9999999999999999999999999999999999 7776543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=5.5e-36  Score=233.84  Aligned_cols=186  Identities=41%  Similarity=0.640  Sum_probs=165.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   84 (223)
                      ||++|||||++|||+++|++|+++|++|+++ +|         +....+...++++..+.   .+..|++|.++++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   71 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR---------SAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---------CHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHH
Confidence            5899999999999999999999999999985 55         55556666666654443   34568888888999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+.++||++||..+..+.++...|
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (244)
T 1edo_A           72 TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANY  151 (244)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccc
Confidence            99999999999999999887778888999999999999999999999999999988777999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|++++.++++++.|++++||++++|+||++ |++...
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (244)
T 1edo_A          152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK  191 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             hhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence            999999999999999999999999999999999 776554

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2e-36  Score=237.64  Aligned_cols=183  Identities=14%  Similarity=0.136  Sum_probs=159.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+..+|++|||||++|||+++|++|+++|++|++++|+.....                  ...+.+|++|.++++++++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------------~~~~~~d~~d~~~v~~~~~   79 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------------DHSFTIKDSGEEEIKSVIE   79 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------------SEEEECSCSSHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------------ccceEEEeCCHHHHHHHHH
Confidence            3455899999999999999999999999999999998543211                  1135678999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKS-FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++.++++++|+||||||.....+ +.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+..+.++...
T Consensus        80 ~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~  157 (251)
T 3orf_A           80 KINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG--GLFVLTGASAALNRTSGMIA  157 (251)
T ss_dssp             HHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHH
T ss_pred             HHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC--CEEEEEechhhccCCCCCch
Confidence            99999999999999999876654 6788899999999999999999999999998764  89999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccccCCCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      |++||++++.|+++++.|++  ++||+||+|+||+| |++.....++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~  204 (251)
T 3orf_A          158 YGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD  204 (251)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc
Confidence            99999999999999999987  89999999999999 8777665543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-36  Score=237.24  Aligned_cols=192  Identities=26%  Similarity=0.319  Sum_probs=162.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C---CccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G---GKAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~   79 (223)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+         ........+++... +   ..+..|++|.+++
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~   79 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS---------AADAVEVTEKVGKEFGVKTKAYQCDVSNTDIV   79 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS---------CTTHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCc---------chhhHHHHHHHHHhcCCeeEEEEeeCCCHHHH
Confidence            456889999999999999999999999999999999883         22222223333221 2   2345688888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~  158 (223)
                      +.+++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++ .++||++||..+..+.
T Consensus        80 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  159 (265)
T 1h5q_A           80 TKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN  159 (265)
T ss_dssp             HHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc
Confidence            999999999999999999999988777888899999999999999999999999999998765 4899999998887665


Q ss_pred             CC-------CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        159 FG-------QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       159 ~~-------~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +.       ...|+++|++++.++++++.|++++||+|++|+||++ |++....
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  213 (265)
T 1h5q_A          160 QSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM  213 (265)
T ss_dssp             EEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred             cccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc
Confidence            42       7889999999999999999999999999999999999 7766543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.1e-35  Score=239.19  Aligned_cols=187  Identities=24%  Similarity=0.297  Sum_probs=166.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~   79 (223)
                      ..++++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+. +.   .+.+|++|.+++
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~   91 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR---------KMDVLKATAEQISSQTGNKVHAIQCDVRDPDMV   91 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHH
Confidence            45688999999999999999999999999999999988         666666666666543 32   345688888889


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHH-hcCCCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK-KQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~  158 (223)
                      +++++.+.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|. ..+.++||++||..+..+.
T Consensus        92 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~  171 (302)
T 1w6u_A           92 QNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS  171 (302)
T ss_dssp             HHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC
Confidence            999999999999999999999987777888899999999999999999999999999997 4456899999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      ++...|++||++++.++++++.|++++||++++|+||++ |+
T Consensus       172 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  213 (302)
T 1w6u_A          172 GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK  213 (302)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCc
Confidence            999999999999999999999999999999999999999 66

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=6.3e-36  Score=233.56  Aligned_cols=185  Identities=22%  Similarity=0.323  Sum_probs=156.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++++|++|||||++|||++++++|+++|++|++++|         +....+++.+++. ....+..|++|.+++++++ 
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~-   71 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR---------TQADLDSLVRECP-GIEPVCVDLGDWEATERAL-   71 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH-
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHcC-CCCEEEEeCCCHHHHHHHH-
Confidence            5688999999999999999999999999999999987         5555544433331 1122345666655554444 


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  163 (223)
                         +.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+.|.|.+.+ .++||++||..+..+.++...
T Consensus        72 ---~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  148 (244)
T 3d3w_A           72 ---GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSV  148 (244)
T ss_dssp             ---TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHH
T ss_pred             ---HHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCch
Confidence               3678999999999987777788899999999999999999999999999998765 689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |++||++++.++++++.|++++||++++|+||++ |++...
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  189 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA  189 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhh
Confidence            9999999999999999999999999999999999 776553

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.1e-36  Score=237.58  Aligned_cols=181  Identities=16%  Similarity=0.167  Sum_probs=158.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ..++|++|||||++|||+++|++|+++|++|++++|+.....         .       ....+..|++|.+++++++++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~-------~~~~~~~D~~~~~~v~~~~~~   67 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------S-------ASVIVKMTDSFTEQADQVTAE   67 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------S-------EEEECCCCSCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------C-------CcEEEEcCCCCHHHHHHHHHH
Confidence            356899999999999999999999999999999998543211         0       112356788888889999999


Q ss_pred             HHHhc--CCccEEEeccCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         86 ALENF--GRIDIVINNAGILRDKSF-ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        86 ~~~~~--~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      +.+.+  +++|+||||||.....++ .+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+..+.++..
T Consensus        68 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~  145 (241)
T 1dhr_A           68 VGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMI  145 (241)
T ss_dssp             HHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBH
T ss_pred             HHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CEEEEECCHHHccCCCCch
Confidence            99999  799999999998877777 788899999999999999999999999999763  8999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccccC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .|++||+++++|+++++.|++  ++||+||+|+||++ |++....
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~  190 (241)
T 1dhr_A          146 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS  190 (241)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccccc
Confidence            999999999999999999999  99999999999999 7776543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=3.7e-36  Score=232.11  Aligned_cols=167  Identities=19%  Similarity=0.167  Sum_probs=147.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|         +..                 .|++|.++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~-----------------~D~~~~~~v~~~~~   55 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASR---------QTG-----------------LDISDEKSVYHYFE   55 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESG---------GGT-----------------CCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecC---------Ccc-----------------cCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999987         221                 57777777666665


Q ss_pred             HHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +    ++++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+..+.++...
T Consensus        56 ~----~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~  129 (223)
T 3uce_A           56 T----IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG--GSITLTSGMLSRKVVANTYV  129 (223)
T ss_dssp             H----HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--EEEEEECCGGGTSCCTTCHH
T ss_pred             H----hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC--eEEEEecchhhccCCCCchH
Confidence            4    48999999999987 56788999999999999999999999999999999764  89999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |+++|+++++|+++|+.|+++  |+||+|+||++ |++.....
T Consensus       130 Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~  170 (223)
T 3uce_A          130 KAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMN  170 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSC
T ss_pred             HHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcc
Confidence            999999999999999999987  99999999999 77765543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2.4e-36  Score=245.58  Aligned_cols=189  Identities=23%  Similarity=0.288  Sum_probs=155.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH------HhCCccccccCCccchHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR------SKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~   81 (223)
                      ++|++|||||++|||+++|++|+++|++|++++|+..      +........+...      .....+..|++|..+++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   74 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLR------DLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAA   74 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEES------CGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecC------cHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHH
Confidence            4789999999999999999999999999988877322      2222222222222      112234568888888888


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++  .++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.++.
T Consensus        75 ~~~~~--~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~  152 (327)
T 1jtv_A           75 ARERV--TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN  152 (327)
T ss_dssp             HHHTC--TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC
T ss_pred             HHHHH--hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCC
Confidence            88776  3589999999999877778888999999999999999999999999999988777999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..|++||+++++|+++|+.|++++||+||+|+||+| |++....
T Consensus       153 ~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  196 (327)
T 1jtv_A          153 DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhh
Confidence            999999999999999999999999999999999999 8776543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=9.9e-36  Score=232.45  Aligned_cols=186  Identities=36%  Similarity=0.577  Sum_probs=165.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCCc----cccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGGK----AVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~   83 (223)
                      +|++|||||++|||+++|++|+++|++|+++ +|         +....++..+++...+..    +..|++|.+++++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   71 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQ---------NREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALV   71 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESS---------CHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---------CHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Confidence            4789999999999999999999999999998 66         556666666666554433    456888888899999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.++...
T Consensus        72 ~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  151 (245)
T 2ph3_A           72 HQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQAN  151 (245)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHH
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcc
Confidence            99999999999999999988777788899999999999999999999999999998877799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++|++++.++++++.|++++||++++|+||++ |++...
T Consensus       152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  192 (245)
T 2ph3_A          152 YVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER  192 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence            9999999999999999999999999999999999 766543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.3e-37  Score=242.03  Aligned_cols=187  Identities=20%  Similarity=0.311  Sum_probs=127.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|++|||||++|||+++|++|++ |++|++++|         +....+...+ . .....+..|+.+..+ ...+.+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r---------~~~~~~~~~~-~-~~~~~~~~D~~~~~~-~~~~~~   68 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGR---------NPEHLAALAE-I-EGVEPIESDIVKEVL-EEGGVD   68 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEES---------CHHHHHHHHT-S-TTEEEEECCHHHHHH-TSSSCG
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeC---------CHHHHHHHHh-h-cCCcceecccchHHH-HHHHHH
Confidence            57899999999999999999999987 999999987         5544443322 1 111122334444332 222333


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      ..++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+ |+||++||..+..+.++...|+
T Consensus        69 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~  147 (245)
T 3e9n_A           69 KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYA  147 (245)
T ss_dssp             GGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHH
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHH
Confidence            446678999999999998888888899999999999999999999999999998765 9999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +||++++.|+++|+.|++++||+||+|+||++ |++......
T Consensus       148 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  189 (245)
T 3e9n_A          148 ASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD  189 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh
Confidence            99999999999999999999999999999999 877765543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-36  Score=235.27  Aligned_cols=179  Identities=18%  Similarity=0.192  Sum_probs=158.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++|++|||||++|||+++|++|+++|++|++++|+.....         .       ....+..|++|.++++++++++.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~-------~~~~~~~D~~~~~~~~~~~~~~~   65 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------D-------SNILVDGNKNWTEQEQSILEQTA   65 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------S-------EEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------c-------ccEEEeCCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999999999998543211         0       11234678888888899999999


Q ss_pred             Hhc--CCccEEEeccCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         88 ENF--GRIDIVINNAGILRDKSF-ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        88 ~~~--~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+  +++|+||||||.....++ .+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||..+..+.++...|
T Consensus        66 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y  143 (236)
T 1ooe_A           66 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGY  143 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHH
T ss_pred             HHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--CEEEEECchhhccCCCCcHHH
Confidence            998  799999999998777777 788899999999999999999999999999753  899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccccC
Q psy16220        165 SAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++||+++++|+++++.|++  ++||+||+|+||++ |++....
T Consensus       144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~  186 (236)
T 1ooe_A          144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW  186 (236)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc
Confidence            9999999999999999998  99999999999999 7776543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=5.5e-36  Score=244.93  Aligned_cols=196  Identities=14%  Similarity=0.003  Sum_probs=157.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEccCCCCCCCCC-Ch--hhhhHHHHHHHHhCCc---cccccCCccch
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAE-RGASVVVNDLGGQRDGDGK-SS--KAADTVVAEIRSKGGK---AVPNYNSVVDG   79 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~-~G~~vv~~~r~~~~~~~~~-~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~   79 (223)
                      ..+|++|||||++|||+++|+.|++ +|++|++++|+........ +.  ...+...+.+...+..   +..|++|.+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4589999999999999999999999 9999999988543211000 00  0011222334444433   45699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhhh
Q psy16220         80 DKIVQTALENFGRIDIVINNAGIL-------------RDKSF---------------------ARISDTDWQLVQDVHLT  125 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~  125 (223)
                      +++++++.+++|++|+||||||..             ..+++                     .+.+.++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            999999999999999999999974             23455                     67899999999999999


Q ss_pred             HHH-HHHHHHHHH-HHhcCCCcEEEEecCcccccCCCC--chhhhhHHHHHHHHHHHHhhhCCC-CeEEEEEeCCCc-cc
Q psy16220        126 GAF-RVSRAAWPH-MKKQNYGRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSIEGEKN-NIHCNVIVPTAA-SR  199 (223)
Q Consensus       126 ~~~-~l~~~~~~~-~~~~~~g~iv~vsS~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~-~i~v~~v~Pg~v-t~  199 (223)
                      +.+ .+++.+.+. |... .|+||++||..+..+.+..  .+|++||+++.+++|+|+.|++++ |||||+|+||++ |+
T Consensus       205 ~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             hHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            998 788887654 4443 4899999999999999987  999999999999999999999999 999999999999 76


Q ss_pred             cccc
Q psy16220        200 LTED  203 (223)
Q Consensus       200 ~~~~  203 (223)
                      +...
T Consensus       284 ~s~~  287 (405)
T 3zu3_A          284 ASSA  287 (405)
T ss_dssp             HHHT
T ss_pred             hhhc
Confidence            6543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.2e-35  Score=233.59  Aligned_cols=190  Identities=26%  Similarity=0.413  Sum_probs=164.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   82 (223)
                      ++++|++|||||++|||++++++|+++|++|++++|+.        ....+...+++...+.   .+..|++|.++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKA--------PANIDETIASMRADGGDAAFFAADLATSEACQQL   75 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--------CTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCc--------hhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            57899999999999999999999999999999998831        3444455555554333   345688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCC-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--C---CcEEEEecCcccc
Q psy16220         83 VQTALENFGRIDIVINNAGI-LRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--Y---GRLVMTASNSGLL  156 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~---g~iv~vsS~~~~~  156 (223)
                      ++++.++++++|+||||||. ....++.+.+.++|++++++|+.+++.+++.++|.|.+.+  .   ++||++||..+..
T Consensus        76 ~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  155 (258)
T 3afn_B           76 VDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT  155 (258)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc
Confidence            99999999999999999997 5667788899999999999999999999999999987543  3   8999999998887


Q ss_pred             -cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        157 -GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       157 -~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                       +.++...|+++|++++.++++++.|++++||++++|+||++ |++...
T Consensus       156 ~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (258)
T 3afn_B          156 GGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD  204 (258)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence             88899999999999999999999999999999999999999 766543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.9e-36  Score=236.76  Aligned_cols=177  Identities=19%  Similarity=0.235  Sum_probs=154.8

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAE-RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .++|++|||||++|||+++|++|++ .|++|++.+|+....        .+        ....+.+|++|.++++++++.
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~--------~~~~~~~Dv~~~~~v~~~~~~   65 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AE--------NLKFIKADLTKQQDITNVLDI   65 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CT--------TEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cc--------cceEEecCcCCHHHHHHHHHH
Confidence            4678999999999999999999998 789999988743311        00        113456789998888888854


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      + + ++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|+++  |+||++||..+..+.++...|+
T Consensus        66 ~-~-~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~  141 (244)
T 4e4y_A           66 I-K-NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYT  141 (244)
T ss_dssp             T-T-TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHH
T ss_pred             H-H-hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhH
Confidence            4 3 7899999999999888889999999999999999999999999999998776  8999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +||+++++|+++|+.|++++||+||+|+||+| |++..+
T Consensus       142 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  180 (244)
T 4e4y_A          142 LSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN  180 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH
Confidence            99999999999999999999999999999999 776543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3e-35  Score=234.17  Aligned_cols=188  Identities=27%  Similarity=0.328  Sum_probs=160.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      +++++|++|||||++|||+++|++|+++|++|++++|+         ....+...+.+...+.   .+..|++|.++++.
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  100 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNS---------HPADEKAEHLQKTYGVHSKAYKCNISDPKSVEE  100 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESS---------SCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---------HHHHHHHHHHHHhcCCcceEEEeecCCHHHHHH
Confidence            45889999999999999999999999999999999883         2233333344443332   34568888888999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCC-CCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--
Q psy16220         82 IVQTALENFGRIDIVINNAGILRD-KSFA-RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--  157 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--  157 (223)
                      +++++.+.++++|+||||||.... .++. +.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+  
T Consensus       101 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  180 (279)
T 3ctm_A          101 TISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI  180 (279)
T ss_dssp             HHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC--
T ss_pred             HHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC
Confidence            999999999999999999998765 6666 788999999999999999999999999999877799999999999888  


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .++...|+++|++++.++++++.|+++++ +||+|+||++ |++..
T Consensus       181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          181 PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence            78889999999999999999999999999 9999999999 77653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=9.8e-37  Score=248.22  Aligned_cols=196  Identities=17%  Similarity=0.133  Sum_probs=155.4

Q ss_pred             CCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC------------------
Q psy16220          8 DGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG------------------   67 (223)
Q Consensus         8 ~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------------------   67 (223)
                      ++|++||||+++  |||+++|++|+++|++|+++++++...-..++....+...........                  
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            478999999985  999999999999999999876532000000000000000000000000                  


Q ss_pred             --------ccccccCCccchHHHHHHHHHhcCCccEEEeccCCC--CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy16220         68 --------KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGIL--RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPH  137 (223)
Q Consensus        68 --------~~~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  137 (223)
                              ...+|++|..+++++++++.+.++++|+||||||+.  ...++.+.+.++|++++++|+.+++.+++.++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                    123345555599999999999999999999999975  3578889999999999999999999999999999


Q ss_pred             HHhcCCCcEEEEecCcccccCCCCc-hhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-ccccccCC
Q psy16220        138 MKKQNYGRLVMTASNSGLLGNFGQA-NYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       138 ~~~~~~g~iv~vsS~~~~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |+++  |+||++||.++..+.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+| |++.....
T Consensus       161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~  229 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAIN  229 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC
T ss_pred             HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhh
Confidence            9876  8999999999999999996 9999999999999999999998 8999999999999 88877653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=4.8e-36  Score=247.33  Aligned_cols=197  Identities=14%  Similarity=0.038  Sum_probs=157.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEccCCCCCCCCC-Ch--hhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAE-RGASVVVNDLGGQRDGDGK-SS--KAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~-~G~~vv~~~r~~~~~~~~~-~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+........ ..  .....+.+.++..+..   +..|++|.++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            589999999999999999999999 9999999998544321100 00  0011223444544443   456999999999


Q ss_pred             HHHHHHHHhc-CCccEEEeccCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhhh
Q psy16220         81 KIVQTALENF-GRIDIVINNAGIL-------------RDKSF---------------------ARISDTDWQLVQDVHLT  125 (223)
Q Consensus        81 ~~~~~~~~~~-~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~  125 (223)
                      ++++.+.+++ |++|+||||||..             ..+++                     .+.+.++|+.++++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999872             23344                     36799999999999999


Q ss_pred             HHH-HHHHHHHHHHHhcCCCcEEEEecCcccccCCCC--chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        126 GAF-RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       126 ~~~-~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      +.+ .+++.+.+.+...+.|+||++||..+..+.|+.  .+|++||+|+.+|+++|+.|++++|||||+|+||+| |++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            987 788887764332334899999999999888866  999999999999999999999999999999999999 7776


Q ss_pred             ccC
Q psy16220        202 EDI  204 (223)
Q Consensus       202 ~~~  204 (223)
                      ...
T Consensus       300 ~~i  302 (422)
T 3s8m_A          300 AAI  302 (422)
T ss_dssp             GGS
T ss_pred             hcC
Confidence            543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-35  Score=236.25  Aligned_cols=187  Identities=25%  Similarity=0.381  Sum_probs=164.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----CC---ccccccCC
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GG---KAVPNYNS   75 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~   75 (223)
                      +..+++|++|||||++|||+++|++|+++|++|++++|         +....+...+++...     +.   .+..|++|
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~   83 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASR---------KLERLKSAADELQANLPPTKQARVIPIQCNIRN   83 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhccccCCccEEEEecCCCC
Confidence            34678999999999999999999999999999999988         666666666676551     22   23468888


Q ss_pred             ccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         76 VVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        76 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      ..+++.+++.+.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.+.+.+.++||++||.. .
T Consensus        84 ~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~  162 (303)
T 1yxm_A           84 EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-K  162 (303)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-T
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-c
Confidence            888999999999999999999999998777778889999999999999999999999999965544458999999988 8


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      .+.++...|+++|+++.+++++++.|++++||++++|+||++ +++
T Consensus       163 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          163 AGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             TCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             cCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence            888899999999999999999999999999999999999999 663

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.3e-34  Score=231.46  Aligned_cols=187  Identities=26%  Similarity=0.299  Sum_probs=163.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC----ccccccCCccchHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG----KAVPNYNSVVDGDK   81 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~   81 (223)
                      .+++|++|||||++|||+++|++|+++|++|++++|         +....+...+++.+.+.    .+..|++|.++++.
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   95 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR---------SKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQ   95 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHH
Confidence            478999999999999999999999999999999988         66666666666655443    34568888888999


Q ss_pred             HHHHHHHhcCCccEEEec-cCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINN-AGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+.++++|+|||| ||... .++.+.+.++|++++++|+.+++.+++.++|.|++.. |+||++||.++..+.++
T Consensus        96 ~~~~~~~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~  173 (286)
T 1xu9_A           96 FVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPM  173 (286)
T ss_dssp             HHHHHHHHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-CEEEEECCcccccCCCC
Confidence            999999999999999999 56543 3455678999999999999999999999999987654 89999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhh--CCCCeEEEEEeCCCc-cccccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEG--EKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~--~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ...|++||++++.++++++.|+  .+.||++++|+||++ |++..+
T Consensus       174 ~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~  219 (286)
T 1xu9_A          174 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  219 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHH
Confidence            9999999999999999999999  678999999999999 776543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-35  Score=228.29  Aligned_cols=184  Identities=23%  Similarity=0.330  Sum_probs=155.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|++|||||++|||++++++|+++|++|++++|         +....++..++.. ....+..|++|.+++++++ 
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~-   71 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR---------TNSDLVSLAKECP-GIEPVCVDLGDWDATEKAL-   71 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH-
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHhcc-CCCcEEecCCCHHHHHHHH-
Confidence            5688999999999999999999999999999999987         5544444333221 1112344666655554444 


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  163 (223)
                         +.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...
T Consensus        72 ---~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  148 (244)
T 1cyd_A           72 ---GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLIT  148 (244)
T ss_dssp             ---TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHH
T ss_pred             ---HHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcch
Confidence               3678999999999988777788899999999999999999999999999998766 689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |+++|++++.++++++.|++++||++++|+||.+ +++..
T Consensus       149 Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence            9999999999999999999999999999999999 76544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.5e-35  Score=239.86  Aligned_cols=197  Identities=19%  Similarity=0.182  Sum_probs=154.1

Q ss_pred             ccccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCC--CCCChhhhhHHHHHHHHhC-----Cc------
Q psy16220          4 QVRFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDG--DGKSSKAADTVVAEIRSKG-----GK------   68 (223)
Q Consensus         4 ~~~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~------   68 (223)
                      .+++++|++|||||  ++|||+++|++|+++|++|++++|+.....  ..++....++. +++....     ..      
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~   82 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAA   82 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTT
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhcccccccccccccccc
Confidence            35688999999999  899999999999999999999976210000  00000011111 1111100     11      


Q ss_pred             ------cccccC--------CccchHHHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q psy16220         69 ------AVPNYN--------SVVDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSR  132 (223)
Q Consensus        69 ------~~~~~~--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  132 (223)
                            +..|++        |..+++.+++++.++++++|+||||||...  ..++.+.+.++|++++++|+.+++.+++
T Consensus        83 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           83 FDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             CSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                  112223        255788999999999999999999999763  4678889999999999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEecCcccccCCCC-chhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-cccccc
Q psy16220        133 AAWPHMKKQNYGRLVMTASNSGLLGNFGQ-ANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       133 ~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++|+|++.  |+||++||.++..+.++. ..|++||+++.+|+++|+.|+++ +||+||+|+||+| |++...
T Consensus       163 ~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~  234 (315)
T 2o2s_A          163 HFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASA  234 (315)
T ss_dssp             HHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHH
T ss_pred             HHHHHHhcC--CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhh
Confidence            999999764  899999999999988887 59999999999999999999985 8999999999999 777554

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=5.2e-36  Score=243.02  Aligned_cols=198  Identities=23%  Similarity=0.237  Sum_probs=132.7

Q ss_pred             ccccCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCC--CCCCChhhh-----------hHHHHHHHHhCC-
Q psy16220          4 QVRFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRD--GDGKSSKAA-----------DTVVAEIRSKGG-   67 (223)
Q Consensus         4 ~~~~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~--~~~~~~~~~-----------~~~~~~~~~~~~-   67 (223)
                      .+++++|++|||||  ++|||+++|++|+++|++|++++|+....  ...++...+           +++.+++.+.+. 
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            35688999999999  89999999999999999999998631000  000000000           122233332221 


Q ss_pred             ----c-c------------ccccCC--------ccchHHHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHH
Q psy16220         68 ----K-A------------VPNYNS--------VVDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQ  120 (223)
Q Consensus        68 ----~-~------------~~~~~~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~  120 (223)
                          . +            ..|++|        .++++.+++++.+.++++|+||||||...  ..++.+.+.++|++++
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence                1 1            112222        45788999999999999999999999763  4678889999999999


Q ss_pred             HhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC-chhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-
Q psy16220        121 DVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ-ANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-  197 (223)
Q Consensus       121 ~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-  197 (223)
                      ++|+.+++.+++.++|+|++.  |+||++||..+..+.++. ..|++||+++.+|+++|+.|+++ +||+||+|+||+| 
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  241 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK  241 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             hHhhHHHHHHHHHHHHHHhcC--ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence            999999999999999999764  899999999999988887 69999999999999999999985 8999999999999 


Q ss_pred             cccccc
Q psy16220        198 SRLTED  203 (223)
Q Consensus       198 t~~~~~  203 (223)
                      |++...
T Consensus       242 T~~~~~  247 (319)
T 2ptg_A          242 SRAASA  247 (319)
T ss_dssp             ------
T ss_pred             Chhhhh
Confidence            777654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3e-35  Score=236.28  Aligned_cols=197  Identities=18%  Similarity=0.182  Sum_probs=153.0

Q ss_pred             ccccCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEccCCCCCC--CCCChhhhhHHHHHHHHhC-----C-------
Q psy16220          4 QVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDG--DGKSSKAADTVVAEIRSKG-----G-------   67 (223)
Q Consensus         4 ~~~~~~~~~lItGa~--~giG~a~a~~l~~~G~~vv~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~-----~-------   67 (223)
                      .+++++|++|||||+  +|||+++|++|+++|++|++++|+..+..  ..++....++. +++....     .       
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence            356889999999999  99999999999999999999976210000  00000011110 1111000     0       


Q ss_pred             -----ccccccCC--------ccchHHHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q psy16220         68 -----KAVPNYNS--------VVDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQDVHLTGAFRVSR  132 (223)
Q Consensus        68 -----~~~~~~~~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  132 (223)
                           .+..|++|        ..+++.+++++.++++++|+||||||...  ..++.+.+.++|++++++|+.+++.+++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                 01112222        56788999999999999999999999754  4677889999999999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEecCcccccCCCC-chhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-cccccc
Q psy16220        133 AAWPHMKKQNYGRLVMTASNSGLLGNFGQ-ANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       133 ~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      .++|+|++.  |+||++||..+..+.++. ..|++||+++++|+++|+.|+++ +||+||+|+||+| |++...
T Consensus       162 ~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~  233 (297)
T 1d7o_A          162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred             HHHHHhccC--ceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh
Confidence            999999764  899999999999998887 69999999999999999999985 8999999999999 776543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-35  Score=229.31  Aligned_cols=185  Identities=19%  Similarity=0.231  Sum_probs=155.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHH-HHhCCccccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++|++|||||++|||++++++|+++|  ++|++++|         +....+.+. ++ ......+..|++|..+++.+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r---------~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~   71 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR---------DVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVS   71 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES---------SGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec---------CHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHH
Confidence            57899999999999999999999999  99999988         333333221 11 0111234568888888999999


Q ss_pred             HHHHhcC--CccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------C-----CCcEEEEe
Q psy16220         85 TALENFG--RIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------N-----YGRLVMTA  150 (223)
Q Consensus        85 ~~~~~~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~g~iv~vs  150 (223)
                      ++.+.++  ++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|.|.+.      +     .++||++|
T Consensus        72 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  151 (250)
T 1yo6_A           72 KVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             HHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             HHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEec
Confidence            9999888  9999999999887 6788889999999999999999999999999999876      4     68999999


Q ss_pred             cCcccccC-------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        151 SNSGLLGN-------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       151 S~~~~~~~-------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      |..+..+.       ++...|++||++++.++++++.|++++||++++|+||++ |++..
T Consensus       152 S~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  211 (250)
T 1yo6_A          152 SGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG  211 (250)
T ss_dssp             CGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------
T ss_pred             cCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC
Confidence            99888776       678899999999999999999999999999999999999 77654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-34  Score=227.35  Aligned_cols=177  Identities=24%  Similarity=0.333  Sum_probs=149.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   83 (223)
                      ..+++|++|||||++|||+++|++|+++|++|++++|         +....    +++   + ..... +|. ++++.++
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r---------~~~~~----~~~---~-~~~~~-~D~~~~~~~~~   76 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR---------NEELL----KRS---G-HRYVV-CDLRKDLDLLF   76 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHH----HHT---C-SEEEE-CCTTTCHHHHH
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC---------CHHHH----Hhh---C-CeEEE-eeHHHHHHHHH
Confidence            4578999999999999999999999999999999987         33221    122   1 12222 333 3444444


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +    ...++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++.+.|+||++||..+..+.++...
T Consensus        77 ~----~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  152 (249)
T 1o5i_A           77 E----KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYT  152 (249)
T ss_dssp             H----HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHH
T ss_pred             H----HhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCch
Confidence            4    445899999999988777888999999999999999999999999999999887799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |+++|++++.|+++++.|++++||+||+|+||++ |++...
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  193 (249)
T 1o5i_A          153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE  193 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc
Confidence            9999999999999999999999999999999999 776543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7e-35  Score=230.73  Aligned_cols=180  Identities=26%  Similarity=0.407  Sum_probs=155.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----CCccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----GGKAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   81 (223)
                      +++|++|||||++|||+++|++|+++|++|++++|         +....++..+++.+.     ...+.+|++|.+++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~   75 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW---------NLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRD   75 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHH
Confidence            57899999999999999999999999999999987         555555555555432     1234568999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCcEEEEecCcccccC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN---YGRLVMTASNSGLLGN  158 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~  158 (223)
                      +++.+.+.++++|+||||||...        .++|++.+++|+.+++.+++.++|.|++.+   .|+||++||..+..+.
T Consensus        76 ~~~~~~~~~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  147 (267)
T 2gdz_A           76 TFRKVVDHFGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV  147 (267)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC
Confidence            99999999999999999999642        356899999999999999999999998653   5899999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHH--HhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTL--SIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l--~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|++||++++.+++++  +.|++++||+||+|+||++ |++...
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          148 AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES  195 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence            99999999999999999995  6889999999999999999 776543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=2.4e-35  Score=231.78  Aligned_cols=183  Identities=21%  Similarity=0.250  Sum_probs=152.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHH-HhCCccccccCCc-cchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIR-SKGGKAVPNYNSV-VDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~   82 (223)
                      ++++|++|||||++|||+++|++|+++|++ |++++|+.       .....+++.+... .....+..|++|. ++++++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-------NPTALAELKAINPKVNITFHTYDVTVPVAESKKL   74 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-------CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc-------hHHHHHHHHHhCCCceEEEEEEecCCChHHHHHH
Confidence            578999999999999999999999999996 89988731       1122222211111 0112345688888 888999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCcEEEEecCcccccCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN---YGRLVMTASNSGLLGNF  159 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~  159 (223)
                      ++++.+.++++|+||||||..        +.++|++++++|+.+++.+++.++|.|.+++   .|+||++||.++..+.+
T Consensus        75 ~~~~~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  146 (254)
T 1sby_A           75 LKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH  146 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC
Confidence            999999999999999999973        3467999999999999999999999997653   58999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +...|++||++++.|+++++.+++++||+||+|+||++ |++..+
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence            99999999999999999999999888999999999999 777654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-34  Score=229.15  Aligned_cols=189  Identities=29%  Similarity=0.474  Sum_probs=165.5

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      .+++++|++|||||++|||++++++|+++|++|++++|.        +....++..++++..+..   +..|++|.++++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~--------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~   87 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS--------SSKAAEEVVAELKKLGAQGVAIQADISKPSEVV   87 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC--------chHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            356889999999999999999999999999999998762        344455555666554433   456888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~  159 (223)
                      ++++++.+.++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+++.|++ + ++||++||..+. .+.+
T Consensus        88 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~  165 (274)
T 1ja9_A           88 ALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIP  165 (274)
T ss_dssp             HHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCC
Confidence            999999999999999999999887777888999999999999999999999999999873 3 899999999888 7888


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +...|+++|++++.++++++.|++++||++++|+||.+ |++..
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence            99999999999999999999999999999999999999 76654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-34  Score=225.98  Aligned_cols=189  Identities=16%  Similarity=0.197  Sum_probs=159.1

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERG---ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVV   77 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G---~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   77 (223)
                      ...+++|++|||||++|||+++|++|+++|   ++|++++|+..         ..+. .+++...+.   .+.+|++|.+
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~---------~~~~-~~~l~~~~~~~~~~~~Dl~~~~   85 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE---------QAKE-LEDLAKNHSNIHILEIDLRNFD   85 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT---------SCHH-HHHHHHHCTTEEEEECCTTCGG
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChh---------hhHH-HHHhhccCCceEEEEecCCChH
Confidence            345788999999999999999999999999   99999998432         2222 223332222   3456999999


Q ss_pred             chHHHHHHHHHhcC--CccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------C-----C
Q psy16220         78 DGDKIVQTALENFG--RIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------N-----Y  143 (223)
Q Consensus        78 ~~~~~~~~~~~~~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~  143 (223)
                      +++.+++++.+.++  ++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|.|.+.      +     .
T Consensus        86 ~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~  165 (267)
T 1sny_A           86 AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGR  165 (267)
T ss_dssp             GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTT
T ss_pred             HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCC
Confidence            99999999999888  8999999999877 6778889999999999999999999999999999876      3     5


Q ss_pred             CcEEEEecCcccccCC---CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        144 GRLVMTASNSGLLGNF---GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       144 g~iv~vsS~~~~~~~~---~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      ++||++||..+..+.+   +...|+++|++++.|+++++.|++++||++++|+||+| |++..
T Consensus       166 ~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  228 (267)
T 1sny_A          166 AAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  228 (267)
T ss_dssp             CEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             ceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC
Confidence            8999999998887653   77889999999999999999999999999999999999 77654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=8.3e-36  Score=238.88  Aligned_cols=182  Identities=20%  Similarity=0.262  Sum_probs=147.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ..+++||++|||||++|||+++|++|+++|++|++++|         +....++..+++......+..|++|..++++++
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~   81 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVR---------DTRKGEAAARTMAGQVEVRELDLQDLSSVRRFA   81 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHH
Confidence            34688999999999999999999999999999999988         666655554444222233445777666666655


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc------
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG------  157 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~------  157 (223)
                      +++    +++|+||||||....  ..+.+.++|++++++|+.+++.+++.++|+|.+    +||++||.++..+      
T Consensus        82 ~~~----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~  151 (291)
T 3rd5_A           82 DGV----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLED  151 (291)
T ss_dssp             HTC----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSC
T ss_pred             Hhc----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccc
Confidence            543    899999999998643  356788999999999999999999999999864    8999999888765      


Q ss_pred             -------CCCCchhhhhHHHHHHHHHHHHhhhCCCC--eEEEEEeCCCc-ccccccC
Q psy16220        158 -------NFGQANYSAAKMALVGLSNTLSIEGEKNN--IHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       158 -------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v-t~~~~~~  204 (223)
                             .++...|++||++++.|+++|+.|++++|  |+||+|+||+| |++....
T Consensus       152 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          152 LNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             TTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             ccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence                   34567899999999999999999999877  99999999999 8777654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=9.2e-34  Score=235.32  Aligned_cols=197  Identities=12%  Similarity=0.045  Sum_probs=157.3

Q ss_pred             cCCcEEEEEcCCCchHHH--HHHHHHHcCCeEEEEccCCCCCCCCCCh---hhhhHHHHHHHHhCCc---cccccCCccc
Q psy16220          7 FDGRVAIVTGAGAGLGRS--YALLLAERGASVVVNDLGGQRDGDGKSS---KAADTVVAEIRSKGGK---AVPNYNSVVD   78 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a--~a~~l~~~G~~vv~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~   78 (223)
                      ..+|++|||||++|||++  +|+.|+++|++|++++|+..........   ...+.+.+..+..+..   +.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            568999999999999999  9999999999999999854432100000   0012333333443433   4569999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhh
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGIL-------------RDKSF---------------------ARISDTDWQLVQDVHL  124 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~  124 (223)
                      ++++++++.+++|++|+||||||..             ..+++                     .+.+.++|+.++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974             22333                     3569999999999999


Q ss_pred             hHHH-HHHHHHHHHHHhcCCCcEEEEecCcccccCCCC--chhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-cc
Q psy16220        125 TGAF-RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ--ANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SR  199 (223)
Q Consensus       125 ~~~~-~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~  199 (223)
                      .+.+ .+++.+.+.+...+.|+||++||..+..+.|.+  .+|++||+|+.+|+++|+.|+++ +||+||+|+||+| |+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9988 778887765443445899999999999999988  99999999999999999999999 9999999999999 76


Q ss_pred             cccc
Q psy16220        200 LTED  203 (223)
Q Consensus       200 ~~~~  203 (223)
                      +...
T Consensus       298 ~s~~  301 (418)
T 4eue_A          298 ASAY  301 (418)
T ss_dssp             HHHT
T ss_pred             hhhc
Confidence            6554

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-33  Score=218.49  Aligned_cols=176  Identities=30%  Similarity=0.328  Sum_probs=153.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +|++|||||++|||+++|++|+++|++|++++|+..          .+        ....+..|++|.++++++++++ +
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----------~~--------~~~~~~~D~~~~~~~~~~~~~~-~   62 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----------GE--------DLIYVEGDVTREEDVRRAVARA-Q   62 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----------SS--------SSEEEECCTTCHHHHHHHHHHH-H
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----------cc--------ceEEEeCCCCCHHHHHHHHHHH-H
Confidence            689999999999999999999999999999988432          11        0134567999999999999999 8


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCH----HHHHHHHHhhhhHHHHHHHHHHHHHHhcC---C---CcEEEEecCcccccC
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISD----TDWQLVQDVHLTGAFRVSRAAWPHMKKQN---Y---GRLVMTASNSGLLGN  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~---g~iv~vsS~~~~~~~  158 (223)
                      +++++|+||||||.....++.+.+.    ++|++++++|+.+++.+++.+.+.|.+.+   .   ++||++||..+..+.
T Consensus        63 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  142 (242)
T 1uay_A           63 EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  142 (242)
T ss_dssp             HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC
Confidence            8899999999999876665555444    49999999999999999999999998754   3   399999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ++...|+++|++++.++++++.|++++||++++|+||++ +++...
T Consensus       143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  188 (242)
T 1uay_A          143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG  188 (242)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc
Confidence            999999999999999999999999999999999999999 776554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=3.9e-33  Score=221.01  Aligned_cols=184  Identities=19%  Similarity=0.261  Sum_probs=154.3

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAE-RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      .++|++|||||++|||+++|++|++ +|++|++++|         +....++..+++...+..   +..|++|..+++.+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   72 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR---------DVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRAL   72 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES---------SHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeC---------ChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            3678999999999999999999999 8999999987         666666666677654332   45688888889999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC---
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARIS-DTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN---  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~---  158 (223)
                      ++++.+.++++|+||||||...... .+.+ .++|+.++++|+.+++.+++.++|.|++.  |+||++||..+..+.   
T Consensus        73 ~~~~~~~~g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~  149 (276)
T 1wma_A           73 RDFLRKEYGGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSC  149 (276)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTS
T ss_pred             HHHHHHhcCCCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--CEEEEECChhhhcccccC
Confidence            9999999999999999999765443 3334 58899999999999999999999998764  799999998776320   


Q ss_pred             --------------------------------------CCCchhhhhHHHHHHHHHHHHhhhCC----CCeEEEEEeCCC
Q psy16220        159 --------------------------------------FGQANYSAAKMALVGLSNTLSIEGEK----NNIHCNVIVPTA  196 (223)
Q Consensus       159 --------------------------------------~~~~~y~~sK~a~~~~~~~l~~e~~~----~~i~v~~v~Pg~  196 (223)
                                                            .+...|++||++++.++++++.++++    .||+|++|+||+
T Consensus       150 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~  229 (276)
T 1wma_A          150 SPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGW  229 (276)
T ss_dssp             CHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCS
T ss_pred             ChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCc
Confidence                                                  12378999999999999999999987    799999999999


Q ss_pred             c-ccccc
Q psy16220        197 A-SRLTE  202 (223)
Q Consensus       197 v-t~~~~  202 (223)
                      | |++..
T Consensus       230 v~t~~~~  236 (276)
T 1wma_A          230 VRTDMAG  236 (276)
T ss_dssp             BCSTTTC
T ss_pred             cccCcCC
Confidence            9 77654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3.3e-33  Score=219.76  Aligned_cols=165  Identities=18%  Similarity=0.184  Sum_probs=131.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||+++|++|+++|++|++++|+...         .+.          .+..|++|.++++++++    +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---------~~~----------~~~~Dl~~~~~v~~~~~----~   58 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------VIA----------DLSTAEGRKQAIADVLA----K   58 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------EEC----------CTTSHHHHHHHHHHHHT----T
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh---------hcc----------ccccCCCCHHHHHHHHH----H
Confidence            589999999999999999999999999999984322         111          14456655555554443    5


Q ss_pred             c-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-------------
Q psy16220         90 F-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-------------  155 (223)
Q Consensus        90 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-------------  155 (223)
                      + +++|+||||||.....       +.|++++++|+.+++.+++.++|+|++.+.|+||++||.++.             
T Consensus        59 ~~~~id~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  131 (257)
T 1fjh_A           59 CSKGMDGLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             CTTCCSEEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             hCCCCCEEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhh
Confidence            5 8999999999975411       238999999999999999999999998877999999999887             


Q ss_pred             ---------------ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        156 ---------------LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       156 ---------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                                     .+.++...|++||++++.++++++.|++++||+||+|+||++ |++....
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  196 (257)
T 1fjh_A          132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred             cccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh
Confidence                           344577899999999999999999999999999999999999 7776554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=2.6e-31  Score=227.80  Aligned_cols=190  Identities=16%  Similarity=0.178  Sum_probs=154.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEE-ccCCCCCC----CCCChhhhhHHHHHHHHhCCcc---ccccCCccc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVN-DLGGQRDG----DGKSSKAADTVVAEIRSKGGKA---VPNYNSVVD   78 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~-~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   78 (223)
                      .++++|||||++|||+++|++|+++|++ ++++ +|+.....    ........+++.++++..+..+   .+|++|..+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5789999999999999999999999998 6666 77532200    0011344556666777666544   458888888


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG  157 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~  157 (223)
                      ++.+++++. +++++|+||||||....+++.+.+.++|+.++++|+.+++++.+.+.+.+++++ .++||++||.++..+
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            888888877 789999999999999888999999999999999999999999999999988765 689999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .+++..|+++|+++++|+    .++++.||++++|+||++ |+|..
T Consensus       409 ~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~  450 (525)
T 3qp9_A          409 GAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVT  450 (525)
T ss_dssp             CTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGG
T ss_pred             CCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCcccccccc
Confidence            999999999999999874    566778999999999999 77763

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=2.6e-31  Score=201.68  Aligned_cols=160  Identities=15%  Similarity=0.199  Sum_probs=142.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||++|||++++++|+ +|++|++++|+         ..              .+..|+.|.++++++++.+    
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~---------~~--------------~~~~D~~~~~~~~~~~~~~----   56 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRH---------SG--------------DVTVDITNIDSIKKMYEQV----   56 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESS---------SS--------------SEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecC---------cc--------------ceeeecCCHHHHHHHHHHh----
Confidence            79999999999999999999 99999999873         11              3566888877777666553    


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHHH
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMA  170 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~a  170 (223)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.+++.+.+.|.+.  ++||++||..+..+.++...|+++|++
T Consensus        57 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~~  134 (202)
T 3d7l_A           57 GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGA  134 (202)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCCCCccHHHHHHHHH
Confidence            899999999998777778889999999999999999999999999988654  899999999999999999999999999


Q ss_pred             HHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        171 LVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       171 ~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ++.++++++.|+ ++||++++|.||++ +++.
T Consensus       135 ~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~  165 (202)
T 3d7l_A          135 VTAFAKSAAIEM-PRGIRINTVSPNVLEESWD  165 (202)
T ss_dssp             HHHHHHHHTTSC-STTCEEEEEEECCBGGGHH
T ss_pred             HHHHHHHHHHHc-cCCeEEEEEecCccCCchh
Confidence            999999999999 78999999999999 6643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1.9e-31  Score=203.12  Aligned_cols=172  Identities=20%  Similarity=0.224  Sum_probs=144.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||++++++|+++  +|++++|         +....+...+++..  ..+..|+.|..++++++++    
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r---------~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~----   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGR---------RAGALAELAREVGA--RALPADLADELEAKALLEE----   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECS---------CHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHH----
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEEC---------CHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHh----
Confidence            57999999999999999999988  9999987         55555555444432  3455677777777666655    


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                      ++++|+||||||.....++.+.+.++|++++++|+.+++.+++.+    .+.+.++||++||..+..+.++...|+++|+
T Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  139 (207)
T 2yut_A           64 AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKG  139 (207)
T ss_dssp             HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHH
Confidence            789999999999887778888899999999999999999999998    3444589999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +++.++++++.|++++||++++|+||++ +++..
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~  173 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLPAVATGLWA  173 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc
Confidence            9999999999999999999999999999 66633

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=2e-30  Score=242.78  Aligned_cols=182  Identities=21%  Similarity=0.248  Sum_probs=156.6

Q ss_pred             ccccCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEc-cCCCCCCCCCChhhhhHHHHHHHHh----CC---ccccccC
Q psy16220          4 QVRFDGRVAIVTGAGAG-LGRSYALLLAERGASVVVND-LGGQRDGDGKSSKAADTVVAEIRSK----GG---KAVPNYN   74 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~g-iG~a~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~   74 (223)
                      .++++||++|||||++| ||+++|++|+++|++|++++ |         +....++..+++...    +.   .+.+|++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R---------~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVs  740 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR---------FSKQVTDYYQSIYAKYGAKGSTLIVVPFNQG  740 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESS---------CCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecC---------CHHHHHHHHHHHHHHhhcCCCeEEEEEecCC
Confidence            35688999999999998 99999999999999999984 4         444554444444221    22   3456999


Q ss_pred             CccchHHHHHHHHHh-----cC-CccEEEeccCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHHHhcCC
Q psy16220         75 SVVDGDKIVQTALEN-----FG-RIDIVINNAGILRDK-SFARIS--DTDWQLVQDVHLTGAFRVSRAA--WPHMKKQNY  143 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~-----~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~  143 (223)
                      |..+++.+++.+.+.     +| ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.+  +|.|.+++.
T Consensus       741 d~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~  820 (1887)
T 2uv8_A          741 SKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPA  820 (1887)
T ss_dssp             CHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCE
T ss_pred             CHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCC
Confidence            999999999999888     66 999999999988776 888888  8999999999999999999988  788877666


Q ss_pred             CcEEEEecCcccccCCCCchhhhhHHHHHHH-HHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        144 GRLVMTASNSGLLGNFGQANYSAAKMALVGL-SNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       144 g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~-~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      |+||++||..+..+  +...|++||+|+.+| ++.++.++++. |+||+|+||+|
T Consensus       821 G~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V  872 (1887)
T 2uv8_A          821 QVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWT  872 (1887)
T ss_dssp             EEEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCE
T ss_pred             CEEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEeccc
Confidence            89999999998877  778999999999999 99999999987 99999999999

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.7e-31  Score=240.09  Aligned_cols=182  Identities=21%  Similarity=0.241  Sum_probs=155.0

Q ss_pred             ccccCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEc-cCCCCCCCCCChhhhhHHHHHHHHh----C---CccccccC
Q psy16220          4 QVRFDGRVAIVTGAGAG-LGRSYALLLAERGASVVVND-LGGQRDGDGKSSKAADTVVAEIRSK----G---GKAVPNYN   74 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~g-iG~a~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~   74 (223)
                      .+++++|++|||||++| ||+++|++|+++|++|++++ |         +....++..+++...    +   ..+.+|++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R---------~~e~lee~a~eL~ael~a~Ga~V~vV~~DVT  541 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR---------FSKQVTDYYQSIYAKYGAKGSTLIVVPFNQG  541 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESS---------CSTTTTTHHHHTTTTTCCTTCEEEEEECCSS
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCC---------CHHHHHHHHHHHHHHhhcCCCeEEEEEeCCC
Confidence            45688999999999998 99999999999999999984 4         223333333444221    2   23456999


Q ss_pred             CccchHHHHHHHHHh-----cC-CccEEEeccCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHHHhcCC
Q psy16220         75 SVVDGDKIVQTALEN-----FG-RIDIVINNAGILRDK-SFARIS--DTDWQLVQDVHLTGAFRVSRAA--WPHMKKQNY  143 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~-----~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~  143 (223)
                      |..+++.+++.+.+.     +| ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.
T Consensus       542 D~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krgg  621 (1688)
T 2pff_A          542 SKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPA  621 (1688)
T ss_dssp             STTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCE
T ss_pred             CHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCC
Confidence            999999999999888     77 999999999988776 788888  8999999999999999999998  788887766


Q ss_pred             CcEEEEecCcccccCCCCchhhhhHHHHHHH-HHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        144 GRLVMTASNSGLLGNFGQANYSAAKMALVGL-SNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       144 g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~-~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      |+||++||.++..+  +...|++||+|+++| ++.++.++++. |+||+|+||+|
T Consensus       622 GrIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V  673 (1688)
T 2pff_A          622 QVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWT  673 (1688)
T ss_dssp             EECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCC
T ss_pred             CEEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcC
Confidence            89999999998877  778999999999999 88899999887 99999999999

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=3.7e-29  Score=212.45  Aligned_cols=178  Identities=20%  Similarity=0.238  Sum_probs=148.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   84 (223)
                      ++++|||||++|||+++|++|+++|+ +|++++|+..      +....+++.++++..+..+   .+|++|..+++.+++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~------~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  312 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGA------DAPGAAELRAELEQLGVRVTIAACDAADREALAALLA  312 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGG------GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCC------ChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            58999999999999999999999999 7888877321      2234455666777666544   457777777778787


Q ss_pred             HHHHhcCCccEEEeccCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGIL-RDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++.+. +++|+||||||.. ...++.+.+.++|++++++|+.+++++.+.+.    +...++||++||.++..+.+++..
T Consensus       313 ~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~----~~~~~~iV~~SS~a~~~g~~g~~~  387 (496)
T 3mje_A          313 ELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTA----DLDLDAFVLFSSGAAVWGSGGQPG  387 (496)
T ss_dssp             TCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTTCTTCHH
T ss_pred             HHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhh----ccCCCEEEEEeChHhcCCCCCcHH
Confidence            77665 7999999999998 67889999999999999999999999999874    445689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      |+++|+++++|++.++    +.||++++|+||++ ++.+
T Consensus       388 YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          388 YAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             HHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC
T ss_pred             HHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCcc
Confidence            9999999999988665    45999999999998 5433

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.96  E-value=3.8e-29  Score=233.81  Aligned_cols=183  Identities=22%  Similarity=0.231  Sum_probs=152.5

Q ss_pred             cccCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH----HhCC---ccccccCCc
Q psy16220          5 VRFDGRVAIVTGAGAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SKGG---KAVPNYNSV   76 (223)
Q Consensus         5 ~~~~~~~~lItGa~~g-iG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~   76 (223)
                      ++++||++|||||++| ||+++|++|+++|++|+++++.        +.....+..+++.    ..+.   .+.+|++|.
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R--------~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~  719 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSR--------FSRQVTEYYQGIYARCGARGSQLVVVPFNQGSK  719 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESS--------CCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecC--------ChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCH
Confidence            5688999999999999 9999999999999999998531        3344433333332    2232   345689999


Q ss_pred             cchHHHHHHHHHh---cC-CccEEEeccCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHH--HHHHHHhcCCCcEE
Q psy16220         77 VDGDKIVQTALEN---FG-RIDIVINNAGILRDK-SFARIS--DTDWQLVQDVHLTGAFRVSRA--AWPHMKKQNYGRLV  147 (223)
Q Consensus        77 ~~~~~~~~~~~~~---~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~g~iv  147 (223)
                      .+++.+++.+.+.   +| ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.  +++.|.+++.|+||
T Consensus       720 esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IV  799 (1878)
T 2uv9_A          720 QDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVIL  799 (1878)
T ss_dssp             HHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECC
T ss_pred             HHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEE
Confidence            9999999999888   88 999999999988776 888888  899999999999999999987  77888776668999


Q ss_pred             EEecCcccccCCCCchhhhhHHHHHHHHHHHHh-hhCCCCeEEEEEeCCCcc
Q psy16220        148 MTASNSGLLGNFGQANYSAAKMALVGLSNTLSI-EGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       148 ~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~-e~~~~~i~v~~v~Pg~vt  198 (223)
                      ++||.++..+  +...|++||+++++|++.++. ++++. |+||+|+||++.
T Consensus       800 nISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~  848 (1878)
T 2uv9_A          800 PLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTR  848 (1878)
T ss_dssp             EECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBC
T ss_pred             EEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEeccee
Confidence            9999998887  578999999999999887655 57776 999999999983

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=5.2e-29  Score=195.16  Aligned_cols=165  Identities=19%  Similarity=0.220  Sum_probs=135.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||++++++|+++|++|++++|+...         .+.          .+..|+.|..+++.+++++   
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~----------~~~~D~~~~~~~~~~~~~~---   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQAD---------IEA----------DLSTPGGRETAVAAVLDRC---   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------EEC----------CTTSHHHHHHHHHHHHHHH---
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhH---------ccc----------cccCCcccHHHHHHHHHHc---
Confidence            589999999999999999999999999999984322         110          1445666655555555533   


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  158 (223)
                      .+++|+||||||....       .++|+.++++|+.+++.+++.+.+.|++.+.++||++||..+..+.           
T Consensus        60 ~~~~d~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  132 (255)
T 2dkn_A           60 GGVLDGLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAML  132 (255)
T ss_dssp             TTCCSEEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHH
T ss_pred             CCCccEEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhc
Confidence            3789999999997542       1348899999999999999999999988777899999998887654           


Q ss_pred             ---------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        159 ---------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       159 ---------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                                     ++...|+.+|++++.+++.++.+++++||++++|+||.+ +++...
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~  193 (255)
T 2dkn_A          133 AGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA  193 (255)
T ss_dssp             HTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH
T ss_pred             ccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh
Confidence                           567789999999999999999999889999999999999 766543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=2.8e-29  Score=224.39  Aligned_cols=176  Identities=23%  Similarity=0.305  Sum_probs=149.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHH-HcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLA-ERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKI   82 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~-~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   82 (223)
                      .+|++|||||++|||+++|++|+ ++|+ +|++++|+..      .....+++.+++++.+..+   .+|++|.++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~------~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~  602 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGP------AASGAAELVAQLTAYGAEVSLQACDVADRETLAKV  602 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGG------GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCcc------chHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            57999999999999999999999 7999 5888888321      2344556677777766544   4588888888888


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+.+ ++|+||||||+....++.+.+.++|+..+++|+.|++++.+.+.|.|      +||++||.++..+.+++.
T Consensus       603 ~~~~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~  675 (795)
T 3slk_A          603 LASIPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQG  675 (795)
T ss_dssp             HHTSCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCH
T ss_pred             HHHHHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCH
Confidence            88887766 99999999999988999999999999999999999999999997766      899999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      .|+++|+    |+++|+.+++++||++|+|+||++ ++.
T Consensus       676 ~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          676 NYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             HHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred             HHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcch
Confidence            9999996    555566666677999999999999 653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=9e-27  Score=198.15  Aligned_cols=177  Identities=18%  Similarity=0.266  Sum_probs=146.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      .++++|||||++|||++++++|+++|++ |++++|+..      .....+++.++++..+..   +.+|++|..+++.++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~------~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~  298 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP------DADGAGELVAELEALGARTTVAACDVTDRESVRELL  298 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG------GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCC------CcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            4789999999999999999999999995 899888422      112344555666665544   345777777788888


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+ +.++++|+||||||....+.+.+.+.++++.++++|+.+++++.+.+    .+.+.++||++||.++..+.++...
T Consensus       299 ~~i-~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~----~~~~~~~~V~~SS~a~~~g~~g~~~  373 (486)
T 2fr1_A          299 GGI-GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGG  373 (486)
T ss_dssp             HTS-CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTT
T ss_pred             HHH-HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHh----CcCCCCEEEEEcChHhcCCCCCCHH
Confidence            877 56789999999999988888889999999999999999999999987    3445689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      |+++|++++.|++.++    ..|+++++|+||++ ++
T Consensus       374 Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~  406 (486)
T 2fr1_A          374 YAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGS  406 (486)
T ss_dssp             THHHHHHHHHHHHHHH----HTTCCCEEEEECCBC--
T ss_pred             HHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCC
Confidence            9999999999987665    35999999999999 44

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=7.8e-26  Score=193.21  Aligned_cols=172  Identities=23%  Similarity=0.299  Sum_probs=140.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc---cccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV---PNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   83 (223)
                      .++++|||||++|||++++++|+++|+ +|++++|+..      .....+++.+++...+..+.   +|++|..+++.++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~------~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~  331 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGP------EAPGAAELAEELRGHGCEVVHAACDVAERDALAALV  331 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGG------GSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCc------ccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            478999999999999999999999999 6888887322      11234455666766555443   4666555555554


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.     +++|+||||||......+.+.+.++++.++++|+.+++++.+.+.+.   .+.++||++||.++..+.++...
T Consensus       332 ~~-----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~  403 (511)
T 2z5l_A          332 TA-----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGA  403 (511)
T ss_dssp             HH-----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHH
T ss_pred             hc-----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHH
Confidence            44     78999999999988888889999999999999999999999876322   14589999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      |+++|++++.|++.++    ..|+++++|+||++
T Consensus       404 YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~  433 (511)
T 2z5l_A          404 YAAANAALDALAERRR----AAGLPATSVAWGLW  433 (511)
T ss_dssp             HHHHHHHHHHHHHHHH----TTTCCCEEEEECCB
T ss_pred             HHHHHHHHHHHHHHHH----HcCCcEEEEECCcc
Confidence            9999999999998764    46999999999998

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.94  E-value=2.3e-26  Score=224.15  Aligned_cols=188  Identities=20%  Similarity=0.144  Sum_probs=140.6

Q ss_pred             ccCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          6 RFDGRVAIVTGAGAG-LGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         6 ~~~~~~~lItGa~~g-iG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+....    .....+++.+++...+..   +.+|++|..++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~----~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~ 2208 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDD----RLAFYKQLYRDHARFDATLWVVPANMASYSDIDK 2208 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHH----HHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhh----hhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Confidence            488999999999999 99999999999999999998731110    011144455555444433   4579999999999


Q ss_pred             HHHHHHH----hcCCccEEEeccCC----CCC-CCCCCCCHHH----HHHHHHhhhhHHHHHHHHHHHHHHhcCCC----
Q psy16220         82 IVQTALE----NFGRIDIVINNAGI----LRD-KSFARISDTD----WQLVQDVHLTGAFRVSRAAWPHMKKQNYG----  144 (223)
Q Consensus        82 ~~~~~~~----~~~~id~li~~ag~----~~~-~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~g----  144 (223)
                      +++.+.+    .+|++|+||||||.    ... ....+.+.++    ++..+++|+.+++.+++.+.+.|...+.+    
T Consensus      2209 lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ 2288 (3089)
T 3zen_D         2209 LVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLH 2288 (3089)
T ss_dssp             HHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeE
Confidence            9999988    89999999999997    211 2222333333    44559999999999999999999876533    


Q ss_pred             cEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhh--hCCCCeEEEEEeCCCc-ccc
Q psy16220        145 RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE--GEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       145 ~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e--~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      .++..|+..+.  .++..+|++||+|+.+|+++|+.|  +++ +|+||+|+||+| ++.
T Consensus      2289 ii~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~ 2344 (3089)
T 3zen_D         2289 VVLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTG 2344 (3089)
T ss_dssp             EEEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECST
T ss_pred             EEEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCc
Confidence            22333333332  335668999999999999999999  665 699999999999 443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=1.7e-25  Score=176.80  Aligned_cols=153  Identities=16%  Similarity=0.163  Sum_probs=119.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++|++|||||+|+||++++++|+++|++|++++|+..+..               ......+..|++|.++++.+++   
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~---   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------------GPNEECVQCDLADANAVNAMVA---   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------------CTTEEEEECCTTCHHHHHHHHT---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------------CCCCEEEEcCCCCHHHHHHHHc---
Confidence            4689999999999999999999999999999998543211               0111223456666555544433   


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc------------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL------------  155 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~------------  155 (223)
                          ++|+||||||..        +.++|++++++|+.+++++++.+    ++.+.++||++||..++            
T Consensus        64 ----~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~  127 (267)
T 3rft_A           64 ----GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPD  127 (267)
T ss_dssp             ----TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTT
T ss_pred             ----CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCC
Confidence                699999999973        23458899999999999999998    44456899999998776            


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+.++...|+.||++++.+++.++.++   |+++++|.||.+
T Consensus       128 ~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v  166 (267)
T 3rft_A          128 VPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSC  166 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecc
Confidence            344566889999999999999999885   678888888877

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=2.3e-24  Score=167.17  Aligned_cols=156  Identities=21%  Similarity=0.263  Sum_probs=119.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   82 (223)
                      .++++|++|||||+|+||++++++|+++|++|++++|         +....+.+    ...+  ..+..|+.        
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R---------~~~~~~~~----~~~~~~~~~~~Dl~--------   75 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR---------NEEQGPEL----RERGASDIVVANLE--------   75 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SGGGHHHH----HHTTCSEEEECCTT--------
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC---------ChHHHHHH----HhCCCceEEEcccH--------
Confidence            4578999999999999999999999999999999988         44443332    2222  22333444        


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC---C
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN---F  159 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~---~  159 (223)
                       +.+.+.++++|+||||||....        ++++..+++|+.++.++++.+    ++.+.++||++||..+..+.   +
T Consensus        76 -~~~~~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~  142 (236)
T 3e8x_A           76 -EDFSHAFASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPM  142 (236)
T ss_dssp             -SCCGGGGTTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCG
T ss_pred             -HHHHHHHcCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChh
Confidence             3344556789999999996542        458899999999999999998    44456899999998776654   5


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ....|+.+|++++.+++       ..||++++|.||.+ ++..
T Consensus       143 ~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~  178 (236)
T 3e8x_A          143 NMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEES  178 (236)
T ss_dssp             GGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCC
T ss_pred             hhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCC
Confidence            67899999999999876       46899999999999 5543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=4.6e-24  Score=208.17  Aligned_cols=177  Identities=24%  Similarity=0.261  Sum_probs=132.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   83 (223)
                      .+|++|||||++|||+++|++|+++|++ |++++|+..      ......+..+++...+..   +.+|++|.+++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~------~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~ 1956 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGI------RTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLI 1956 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCC------CSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCc------chHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHH
Confidence            5899999999999999999999999997 777877322      122233445555554443   356888888889999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +++. +++++|+||||||.....++.+.+.++|++++++|+.|++++.+.+.+.+.+.  |+||++||.++..+.+++..
T Consensus      1957 ~~~~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~ 2033 (2512)
T 2vz8_A         1957 TEAT-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQAN 2033 (2512)
T ss_dssp             HHHH-HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHH
T ss_pred             HHHH-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHH
Confidence            8886 47999999999998887889999999999999999999999999999887654  89999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      |+++|+++++|++.++.+    |+...++..|.+
T Consensus      2034 Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2034 YGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            999999999999988766    555666666655

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.89  E-value=7.3e-23  Score=166.14  Aligned_cols=196  Identities=12%  Similarity=0.030  Sum_probs=147.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEccCCCCCCCCCC---hhhhhHHHHHHHHhCCc---cccccCCccch
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLA-ERGASVVVNDLGGQRDGDGKS---SKAADTVVAEIRSKGGK---AVPNYNSVVDG   79 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~-~~G~~vv~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   79 (223)
                      ...|++|||||++|||++++..|+ +.|+.++++++...+......   ........+.+++.+..   +.+|+.|.+++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457999999999999999999999 689999999886554321111   12334455666666664   45688899999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCC-------------CCC---------------------CCCCHHHHHH---HHHh
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRD-------------KSF---------------------ARISDTDWQL---VQDV  122 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~-------------~~~---------------------~~~~~~~~~~---~~~~  122 (223)
                      +++++++.+++|++|+||||++....             +|+                     ...+.++++.   .+..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~  207 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG  207 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence            99999999999999999999997521             111                     1234455554   4445


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccc
Q psy16220        123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRL  200 (223)
Q Consensus       123 n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~  200 (223)
                      ..++.+...+...+.|.+.  +++|.+|+..+....|  +...++.+|++|+..++.|+.++++  ++++.++||.+.+.
T Consensus       208 s~~s~w~~al~~a~lla~G--~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT~  283 (401)
T 4ggo_A          208 EDWERWIKQLSKEGLLEEG--CITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVTR  283 (401)
T ss_dssp             HHHHHHHHHHHHTTCEEEE--EEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCCT
T ss_pred             hHHHHHHHHHHhhhcccCC--ceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccccc
Confidence            6667777788777777665  8999999988866555  4568999999999999999999985  89999999999444


Q ss_pred             cccCCC
Q psy16220        201 TEDILP  206 (223)
Q Consensus       201 ~~~~~~  206 (223)
                      ....+|
T Consensus       284 AssaIP  289 (401)
T 4ggo_A          284 ASAVIP  289 (401)
T ss_dssp             TGGGSS
T ss_pred             hhhcCC
Confidence            444444

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=1.1e-23  Score=163.87  Aligned_cols=157  Identities=14%  Similarity=0.113  Sum_probs=117.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++|++|||||+|+||++++++|+++|+  +|++++|+......      ..      ......+..|+.|.+++++++
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~------~~------~~~~~~~~~D~~d~~~~~~~~   82 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EA------YKNVNQEVVDFEKLDDYASAF   82 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GG------GGGCEEEECCGGGGGGGGGGG
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc------cc------cCCceEEecCcCCHHHHHHHh
Confidence            36789999999999999999999999999  99999985433210      00      012223445666665555433


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                             .++|+||||||....       ..+++..+++|+.++..+++.+    .+.+.++||++||..+..  +....
T Consensus        83 -------~~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~--~~~~~  142 (242)
T 2bka_A           83 -------QGHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADK--SSNFL  142 (242)
T ss_dssp             -------SSCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSH
T ss_pred             -------cCCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCC--CCcch
Confidence                   379999999996432       2457889999999999988875    445568999999987664  34568


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      |+.+|++++.+++.++.+      ++++|+||.+ ++.
T Consensus       143 Y~~sK~~~e~~~~~~~~~------~~~~vrpg~v~~~~  174 (242)
T 2bka_A          143 YLQVKGEVEAKVEELKFD------RYSVFRPGVLLCDR  174 (242)
T ss_dssp             HHHHHHHHHHHHHTTCCS------EEEEEECCEEECTT
T ss_pred             HHHHHHHHHHHHHhcCCC------CeEEEcCceecCCC
Confidence            999999999998765322      8999999999 654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.89  E-value=1.2e-22  Score=165.30  Aligned_cols=169  Identities=20%  Similarity=0.185  Sum_probs=127.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCc---c-ccccCCccch
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGK---A-VPNYNSVVDG   79 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~-~~~~~~~~~~   79 (223)
                      ..++++++|||||+|+||++++++|+++|++|++++|         +....+.+.+.+... +..   + ..|+.|..++
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~   77 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR---------SASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY   77 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---------CcccHHHHHHHhhccCCCceEEEEecCCcChHHH
Confidence            3467899999999999999999999999999999987         444444444333321 111   2 3566666555


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~  158 (223)
                      ++++       .++|+|||+||.....       +++++++++|+.++.++++.+.+   ..+.++||++||...+. +.
T Consensus        78 ~~~~-------~~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~  140 (342)
T 1y1p_A           78 DEVI-------KGAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPK  140 (342)
T ss_dssp             TTTT-------TTCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCC
T ss_pred             HHHH-------cCCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCC
Confidence            4433       3799999999975432       24678999999999999998843   23457999999976653 21


Q ss_pred             ------------------------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        159 ------------------------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       159 ------------------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                                                    .+...|+.+|++.+.+++.++.++.+ ++++++|.||.+ .+.
T Consensus       141 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~  212 (342)
T 1y1p_A          141 PNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             TTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCC
T ss_pred             CCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCC
Confidence                                          12367999999999999999999876 899999999998 544

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.89  E-value=1.1e-22  Score=166.20  Aligned_cols=165  Identities=13%  Similarity=0.150  Sum_probs=125.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCccccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAER-GA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~-G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   82 (223)
                      .+++|++|||||+|+||++++++|+++ |+ +|++++|         +......+.+++... ...+..|+.|..++.. 
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r---------~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~-   87 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR---------DELKQSEMAMEFNDPRMRFFIGDVRDLERLNY-   87 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES---------CHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH-
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC---------ChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH-
Confidence            367899999999999999999999999 98 9999987         555554444444321 1122335554433332 


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                            .+.++|+|||+||.... +   ....+..+.+++|+.++.++++++.+.    +.++||++||..+..|   ..
T Consensus        88 ------~~~~~D~Vih~Aa~~~~-~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~  150 (344)
T 2gn4_A           88 ------ALEGVDICIHAAALKHV-P---IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---IN  150 (344)
T ss_dssp             ------HTTTCSEEEECCCCCCH-H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CS
T ss_pred             ------HHhcCCEEEECCCCCCC-C---chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---cc
Confidence                  23479999999996532 1   112345689999999999999998553    4579999999776544   57


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .|+.+|++++.++++++.++++.|+++++|.||.|
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v  185 (344)
T 2gn4_A          151 LYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNV  185 (344)
T ss_dssp             HHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccE
Confidence            89999999999999999998889999999999998

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=2.1e-22  Score=165.07  Aligned_cols=171  Identities=15%  Similarity=0.062  Sum_probs=126.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH--HhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++++|||||+|+||++++++|+++|++|++++|+....         ....+.+.  .....+..|+.|..++..++
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   76 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV---------PSLFETARVADGMQSEIGDIRDQNKLLESI   76 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS---------SCHHHHTTTTTTSEEEECCTTCHHHHHHHH
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc---------chhhHhhccCCceEEEEccccCHHHHHHHH
Confidence            46789999999999999999999999999999999843321         11111111  11122345666665555555


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-------
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-------  156 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-------  156 (223)
                      +..     ++|+|||+||...    ...+.++++..+++|+.++.++++.+.+.   .+.++||++||...+-       
T Consensus        77 ~~~-----~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~  144 (357)
T 1rkx_A           77 REF-----QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWG  144 (357)
T ss_dssp             HHH-----CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSC
T ss_pred             Hhc-----CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCC
Confidence            443     7999999999521    22345667899999999999999998553   2247999999976421       


Q ss_pred             -----cCCCCchhhhhHHHHHHHHHHHHhhhC------CCCeEEEEEeCCCc
Q psy16220        157 -----GNFGQANYSAAKMALVGLSNTLSIEGE------KNNIHCNVIVPTAA  197 (223)
Q Consensus       157 -----~~~~~~~y~~sK~a~~~~~~~l~~e~~------~~~i~v~~v~Pg~v  197 (223)
                           +..+...|+.+|++++.+++.++.++.      +.|+++++|.||.+
T Consensus       145 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v  196 (357)
T 1rkx_A          145 YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNV  196 (357)
T ss_dssp             BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCE
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeecee
Confidence                 233567899999999999999999875      45899999999999

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=6.5e-22  Score=161.11  Aligned_cols=166  Identities=14%  Similarity=0.087  Sum_probs=121.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH----hCCccccccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++|||||+|+||++++++|+++|++|++++|....         .....+.+..    ....+..|+.|..++++++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS---------KREAIARIEKITGKTPAFHETDVSDERALARIF   74 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS---------CTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc---------hHHHHHHHHhhcCCCceEEEeecCCHHHHHHHH
Confidence            46799999999999999999999999999999884322         2222222222    1122344666665555554


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-------
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-------  156 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-------  156 (223)
                      +.     +++|+|||+||.....    ...+...+.+++|+.++.++++.+    ++.+.++||++||.+.+-       
T Consensus        75 ~~-----~~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~  141 (341)
T 3enk_A           75 DA-----HPITAAIHFAALKAVG----ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPI  141 (341)
T ss_dssp             HH-----SCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSB
T ss_pred             hc-----cCCcEEEECccccccC----ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCC
Confidence            43     5899999999975432    123345678899999999988775    555567999999966542       


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 ----GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ----~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                          +......|+.+|++.+.+++.++.++.  +++++++.|+.+
T Consensus       142 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v  184 (341)
T 3enk_A          142 DETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNP  184 (341)
T ss_dssp             CTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEE
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccc
Confidence                222347899999999999999998863  699999999988

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.87  E-value=9.9e-22  Score=160.01  Aligned_cols=170  Identities=18%  Similarity=0.093  Sum_probs=121.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--hCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--KGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++|++|||||+|+||++++++|+++|++|++++|+.....       . ...+.+..  ....+..|+.|..++.++++.
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-------~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   73 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFA-------S-WRLKELGIENDVKIIHMDLLEFSNIIRTIEK   73 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTT-------T-HHHHHTTCTTTEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc-------c-ccHhhccccCceeEEECCCCCHHHHHHHHHh
Confidence            5789999999999999999999999999999988433210       0 11111111  111234466665555555544


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc----------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL----------  155 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~----------  155 (223)
                      .     ++|+|||+||....    +.+.++++..+++|+.++.++++.+... .  ..++||++||...+          
T Consensus        74 ~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~--~~~~iv~~SS~~vyg~~~~~~~~e  141 (345)
T 2z1m_A           74 V-----QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV-K--PDTKFYQASTSEMFGKVQEIPQTE  141 (345)
T ss_dssp             H-----CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C--TTCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             c-----CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C--CCceEEEEechhhcCCCCCCCCCc
Confidence            3     79999999996431    1234568899999999999999998642 1  12799999997543          


Q ss_pred             -ccCCCCchhhhhHHHHHHHHHHHHhhhC---CCCeEEEEEeCCCc
Q psy16220        156 -LGNFGQANYSAAKMALVGLSNTLSIEGE---KNNIHCNVIVPTAA  197 (223)
Q Consensus       156 -~~~~~~~~y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~Pg~v  197 (223)
                       .+..+...|+.+|++++.+++.++.++.   ..++.++.+.||..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~  187 (345)
T 2z1m_A          142 KTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRG  187 (345)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCC
Confidence             2334567899999999999999999875   34567788889877

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=3.7e-21  Score=159.79  Aligned_cols=173  Identities=17%  Similarity=0.172  Sum_probs=120.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-----------CCccccccCCc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLA-ERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-----------GGKAVPNYNSV   76 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~-~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~   76 (223)
                      ++++|||||+|+||++++++|+ ++|++|++++|..............+.+.+.+...           ...+..|+.|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 99999999988432210000000012222112221           11233455554


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .+++.    +.++++++|+|||+||.....    .+.++++.++++|+.++.++++++    .+.+.++||++||.+.+ 
T Consensus        82 ~~~~~----~~~~~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~-  148 (397)
T 1gy8_A           82 DFLNG----VFTRHGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF-  148 (397)
T ss_dssp             HHHHH----HHHHSCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT-
T ss_pred             HHHHH----HHHhcCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHh-
Confidence            44433    334466799999999965321    134567889999999999999986    44455799999996543 


Q ss_pred             cCC-------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 GNF-------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ~~~-------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +.+                   ....|+.+|++++.+++.++.++   |+++++|.|+.+
T Consensus       149 g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v  205 (397)
T 1gy8_A          149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNA  205 (397)
T ss_dssp             BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccce
Confidence            322                   25789999999999999999886   899999999988

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.86  E-value=2e-21  Score=159.01  Aligned_cols=170  Identities=15%  Similarity=0.046  Sum_probs=123.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH----HhCCccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR----SKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~   80 (223)
                      ++++++++|||||+|+||++++++|+++|++|++++|....     .....+.+.+.+.    .....+..|+.|..+++
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   97 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATG-----HQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN   97 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC-----CHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCcc-----chhhHHHHhhhcccccCCceEEEECCCCCHHHHH
Confidence            45678899999999999999999999999999999884321     1222322222221    11112334555544333


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-  159 (223)
                      +++       .++|+|||+||.....    .+.++++..+++|+.++.++++.+.+    .+.++||++||...+.+.+ 
T Consensus        98 ~~~-------~~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~  162 (352)
T 1sb8_A           98 NAC-------AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPG  162 (352)
T ss_dssp             HHH-------TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCC
T ss_pred             HHh-------cCCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCC
Confidence            332       2799999999964321    13456888999999999999999843    3457999999977654332 


Q ss_pred             ----------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 ----------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ----------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                +...|+.+|++.+.+++.++.++   |+++++|.||.+
T Consensus       163 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v  207 (352)
T 1sb8_A          163 LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNV  207 (352)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCE
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECce
Confidence                      36789999999999999999885   799999999998

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.86  E-value=8.8e-22  Score=159.90  Aligned_cols=164  Identities=15%  Similarity=0.090  Sum_probs=118.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++++++|||||+|+||++++++|+++|++|++++|+....     ......    + .....+..|+.|..+++.+++
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~----l-~~v~~~~~Dl~d~~~~~~~~~   85 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK-----REVLPP----V-AGLSVIEGSVTDAGLLERAFD   85 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC-----GGGSCS----C-TTEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc-----hhhhhc----c-CCceEEEeeCCCHHHHHHHHh
Confidence            457889999999999999999999999999999999843221     100010    1 111223456666665555555


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----C
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----F  159 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----~  159 (223)
                      ++     ++|+||||||.....     +.++++  +++|+.++.++++++.    +.+.++||++||...+.+.     +
T Consensus        86 ~~-----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~  149 (330)
T 2pzm_A           86 SF-----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPIP  149 (330)
T ss_dssp             HH-----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSBC
T ss_pred             hc-----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCCC
Confidence            43     799999999975432     445666  9999999999999985    3345799999998765433     2


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHhhhCCCCeE-EEEEeCCC
Q psy16220        160 ------GQANYSAAKMALVGLSNTLSIEGEKNNIH-CNVIVPTA  196 (223)
Q Consensus       160 ------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~-v~~v~Pg~  196 (223)
                            +...|+.+|++++.+++.+  ++....|| ++.+.||.
T Consensus       150 ~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~  191 (330)
T 2pzm_A          150 IDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL  191 (330)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC
T ss_pred             cCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC
Confidence                  5678999999999999887  44445667 56777774

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.86  E-value=6.7e-21  Score=155.31  Aligned_cols=168  Identities=14%  Similarity=0.058  Sum_probs=123.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      |++|||||+|+||++++++|+++|++|++++|...+        ......+.+...+  ..+..|+.|..+++.+++.  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~--   71 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK--------GATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK--   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCST--------THHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCcc--------CchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc--
Confidence            479999999999999999999999999999873211        1111222333222  1234466665555555443  


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------  156 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------  156 (223)
                         .++|+|||+||....    +.+.++++..+++|+.++.++++++.+...   .++||++||.+.+.           
T Consensus        72 ---~~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~  141 (347)
T 1orr_A           72 ---YMPDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETE  141 (347)
T ss_dssp             ---HCCSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             ---cCCCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccc
Confidence               279999999996431    123456788999999999999999976542   26999999976432           


Q ss_pred             ----------------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        157 ----------------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       157 ----------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                                      +..+...|+.+|++++.+++.++.++   |+++++|.||.+ .+.
T Consensus       142 ~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~  199 (347)
T 1orr_A          142 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGR  199 (347)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             ccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcC
Confidence                            22356789999999999999999885   899999999999 543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.86  E-value=1.9e-21  Score=157.04  Aligned_cols=160  Identities=13%  Similarity=0.009  Sum_probs=120.6

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+-+++|||||+|+||++++++|+++|++|++++|+...          ..    +  ....+..|+.|..+++.+++. 
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~----l--~~~~~~~Dl~d~~~~~~~~~~-   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA----------KL----P--NVEMISLDIMDSQRVKKVISD-   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC----------CC----T--TEEEEECCTTCHHHHHHHHHH-
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc----------cc----c--eeeEEECCCCCHHHHHHHHHh-
Confidence            345799999999999999999999999999999884322          00    1  112234566665555555443 


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--------  158 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~--------  158 (223)
                          +++|+|||+||....    ..+.++++..+++|+.++.++++++ +.+.  +.++||++||...+.+.        
T Consensus        73 ----~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g~~~~~~~~~~  141 (321)
T 2pk3_A           73 ----IKPDYIFHLAAKSSV----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYGMILPEESPVS  141 (321)
T ss_dssp             ----HCCSEEEECCSCCCH----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTBSCCGGGCSBC
T ss_pred             ----cCCCEEEEcCcccch----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcCCCCCCCCCCC
Confidence                479999999996432    1223467889999999999999998 4442  35799999998654322        


Q ss_pred             -----CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -----FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -----~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           ++...|+.+|++++.+++.++.++   |+++++|.||.+
T Consensus       142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v  182 (321)
T 2pk3_A          142 EENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNH  182 (321)
T ss_dssp             TTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcc
Confidence                 456789999999999999999874   899999999998

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.86  E-value=8.8e-21  Score=157.78  Aligned_cols=179  Identities=15%  Similarity=0.008  Sum_probs=120.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCC-------CCChhh-hhHHHHHHHHhCC---ccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGD-------GKSSKA-ADTVVAEIRSKGG---KAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~-------~~~~~~-~~~~~~~~~~~~~---~~~~~~~   74 (223)
                      ..+++++|||||+|.||++++++|+++|++|++++|.......       ...... .+...+.......   .+..|+.
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            3567899999999999999999999999999999873110000       000000 0111111111122   2344666


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCc
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNS  153 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~  153 (223)
                      |..+++.+++..     ++|+|||+||...... ...+.+++..++++|+.++.++++.+.+.    +. .+||++||.+
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~  157 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMG  157 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGG
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHH
Confidence            655555554443     6999999999654221 12356677889999999999999998543    33 4999999975


Q ss_pred             ccc------------------------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        154 GLL------------------------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       154 ~~~------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+.                        +..+...|+.+|++++.+++.++.++   |+++++|.||.|
T Consensus       158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v  222 (404)
T 1i24_A          158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVV  222 (404)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEeccee
Confidence            432                        22345789999999999999998876   899999999998

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.86  E-value=2.2e-21  Score=151.26  Aligned_cols=163  Identities=13%  Similarity=0.020  Sum_probs=114.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++|++|||||+|+||++++++|+++  |++|++++|         +....+.    +......+..|+.|.+++++++ 
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r---------~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~-   67 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR---------SAQGKEK----IGGEADVFIGDITDADSINPAF-   67 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES---------CHHHHHH----TTCCTTEEECCTTSHHHHHHHH-
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc---------CCCchhh----cCCCeeEEEecCCCHHHHHHHH-
Confidence            45789999999999999999999999  899999987         4333222    1112223344665554444333 


Q ss_pred             HHHHhcCCccEEEeccCCCCCCC---------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         85 TALENFGRIDIVINNAGILRDKS---------FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                            ..+|+||||||......         ..+...+++++.+++|+.++..+++.+.    +.+.++||++||..+.
T Consensus        68 ------~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~  137 (253)
T 1xq6_A           68 ------QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGT  137 (253)
T ss_dssp             ------TTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTT
T ss_pred             ------cCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCC
Confidence                  35999999999754211         1222334556788999999999998873    4445799999998876


Q ss_pred             ccCCCCch-----hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        156 LGNFGQAN-----YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       156 ~~~~~~~~-----y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      .+.+....     |+.+|++++.+++.       .|+++++|.||.+ ++.
T Consensus       138 ~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~  181 (253)
T 1xq6_A          138 NPDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKE  181 (253)
T ss_dssp             CTTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSC
T ss_pred             CCCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCC
Confidence            55444444     55589999888753       6899999999999 543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.86  E-value=3.4e-21  Score=156.55  Aligned_cols=169  Identities=14%  Similarity=0.067  Sum_probs=120.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++++|||||+|+||++++++|+++|  ++|++++|.....    +...+.....  ......+..|+.|..++++++   
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~----~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~---   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGS----NPANLKDLED--DPRYTFVKGDVADYELVKELV---   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC----CGGGGTTTTT--CTTEEEEECCTTCHHHHHHHH---
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccC----chhHHhhhcc--CCceEEEEcCCCCHHHHHHHh---
Confidence            4689999999999999999999997  8999998843211    1111111100  001112334555554444333   


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc----------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL----------  156 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~----------  156 (223)
                          +++|+|||+||....    +.+.++++..+++|+.++.++++.+.+.   ...++||++||...+-          
T Consensus        74 ----~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~  142 (336)
T 2hun_A           74 ----RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTEN  142 (336)
T ss_dssp             ----HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             ----hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCC
Confidence                479999999996431    1234567889999999999999999765   2237999999975432          


Q ss_pred             -cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        157 -GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       157 -~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                       +..+...|+.+|++++.+++.++.++   |+++++|.||.+ .+.
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~  185 (336)
T 2hun_A          143 DRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPY  185 (336)
T ss_dssp             BCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTT
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcC
Confidence             33456789999999999999999884   799999999998 443

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.85  E-value=9.1e-21  Score=145.42  Aligned_cols=142  Identities=8%  Similarity=0.006  Sum_probs=105.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHH-HcCCeEEEEccCCCCCCCCCChh-hhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLA-ERGASVVVNDLGGQRDGDGKSSK-AADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~-~~G~~vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      |++|||||+|+||++++++|+ ++|++|++++|         +.. ..+++.. .......+..|+.|.+++++++    
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r---------~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~----   71 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGR---------QLKTRIPPEII-DHERVTVIEGSFQNPGXLEQAV----   71 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES---------SHHHHSCHHHH-TSTTEEEEECCTTCHHHHHHHH----
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec---------Cccccchhhcc-CCCceEEEECCCCCHHHHHHHH----
Confidence            679999999999999999999 89999999988         444 4333220 0111112334555544444333    


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc-----
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA-----  162 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-----  162 (223)
                         .++|+||||||..                   |+.     .+.+++.+++.+.++||++||..+..+.++..     
T Consensus        72 ---~~~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~  124 (221)
T 3r6d_A           72 ---TNAEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTF  124 (221)
T ss_dssp             ---TTCSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHH
T ss_pred             ---cCCCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccc
Confidence               3689999999852                   222     77788888888778999999988877666544     


Q ss_pred             -----hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        163 -----NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       163 -----~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                           .|+.+|.+++.+++.       .||++++|+||.+ ++
T Consensus       125 ~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          125 DNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYND  160 (221)
T ss_dssp             HTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECC
T ss_pred             cccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCC
Confidence                 899999999988763       5899999999999 54

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.85  E-value=5.1e-21  Score=150.91  Aligned_cols=151  Identities=18%  Similarity=0.190  Sum_probs=114.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||+|+||++++++|+++|++|++++|+.....        .       .....+..|+.|..++..++      
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~-------~~~~~~~~Dl~d~~~~~~~~------   61 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------E-------AHEEIVACDLADAQAVHDLV------   61 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------C-------TTEEECCCCTTCHHHHHHHH------
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------C-------CCccEEEccCCCHHHHHHHH------
Confidence            68999999999999999999999999999988543210        0       11122334555544333322      


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----------  159 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  159 (223)
                       ..+|+|||+||...        .++++..+++|+.++.++++.+.    +.+.++||++||...+.+.+          
T Consensus        62 -~~~d~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~  128 (267)
T 3ay3_A           62 -KDCDGIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAAR----NLGKPRIVFASSNHTIGYYPRTTRIDTEVP  128 (267)
T ss_dssp             -TTCSEEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHH----HTTCCEEEEEEEGGGSTTSBTTSCBCTTSC
T ss_pred             -cCCCEEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCHHHhCCCCCCCCCCCCCC
Confidence             35999999999652        24568899999999999999874    34557999999987654332          


Q ss_pred             --CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 --GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 --~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        ....|+.+|++++.+++.++.+   .|+++++|.||.+
T Consensus       129 ~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v  165 (267)
T 3ay3_A          129 RRPDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSC  165 (267)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceee
Confidence              3578999999999999988654   6899999999997

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.85  E-value=1.5e-20  Score=153.38  Aligned_cols=171  Identities=16%  Similarity=0.107  Sum_probs=120.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hC---CccccccCCccchHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KG---GKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~   84 (223)
                      +|++|||||+|+||++++++|+++|++|++++|.....   ++.....+..+.+.. .+   ..+..|+.|..+++.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAF---RGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSC---BCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCccc---ccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHH
Confidence            47899999999999999999999999999998743220   010001111222222 12   223446665554444443


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-------  157 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-------  157 (223)
                      .    + ++|+|||+||.....    .+.+++++.+++|+.++.++++.+    ++.+.++||++||...+..       
T Consensus        79 ~----~-~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~  145 (348)
T 1ek6_A           79 K----Y-SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLD  145 (348)
T ss_dssp             H----C-CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             h----c-CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcC
Confidence            3    2 799999999964321    134567889999999999999876    4445579999999765421       


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 -----NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 -----~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           .|....|+.+|++++.+++.++.+  ..++++..+.|+.+
T Consensus       146 E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v  188 (348)
T 1ek6_A          146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNP  188 (348)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEE
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccc
Confidence                 123678999999999999999987  34799999999887

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.85  E-value=6.1e-21  Score=156.49  Aligned_cols=172  Identities=12%  Similarity=0.029  Sum_probs=123.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||++++++|+++ |++|++++|.....    ....+..+..  ......+..|+.|..++..++++    
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~----   71 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG----NLESLSDISE--SNRYNFEHADICDSAEITRIFEQ----   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC----CGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHH----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCC----chhhhhhhhc--CCCeEEEECCCCCHHHHHHHHhh----
Confidence            5999999999999999999998 79999998843211    1111111100  00111234466665555555443    


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCcEEEEecCcccc--------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-----YGRLVMTASNSGLL--------  156 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~vsS~~~~~--------  156 (223)
                       .++|+|||+||....    +.+.++++.++++|+.++.++++.+.+.|..-+     .++||++||...+-        
T Consensus        72 -~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~  146 (361)
T 1kew_A           72 -YQPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV  146 (361)
T ss_dssp             -HCCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred             -cCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccc
Confidence             279999999996431    223456788999999999999999988865321     25999999965321        


Q ss_pred             -------------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        157 -------------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       157 -------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                                   +..+...|+.+|++++.+++.++.++   |+++++|.||.+ .+.
T Consensus       147 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~  201 (361)
T 1kew_A          147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTT
T ss_pred             cccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCC
Confidence                         12456789999999999999999885   799999999998 543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.85  E-value=2.7e-20  Score=151.37  Aligned_cols=169  Identities=19%  Similarity=0.144  Sum_probs=117.2

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH---HHhCCccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI---RSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++|++|||||+|+||++++++|+++|++|+++.|+..      +......+. ++   ......+..|+.|..+++.++
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~   75 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT------NVKKVKHLL-DLPKAETHLTLWKADLADEGSFDEAI   75 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT------CHHHHHHHH-TSTTHHHHEEEEECCTTSTTTTHHHH
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc------hhHHHHHHH-hcccCCCeEEEEEcCCCCHHHHHHHH
Confidence            46789999999999999999999999999998877321      111111110 01   111223445777776665544


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----  159 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----  159 (223)
                      +       .+|+|||+|+...   ..  ..+..+..+++|+.++.++++++.+..   ..++||++||.++.++.+    
T Consensus        76 ~-------~~d~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~  140 (337)
T 2c29_D           76 K-------GCTGVFHVATPMD---FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLP  140 (337)
T ss_dssp             T-------TCSEEEECCCCCC---SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCS
T ss_pred             c-------CCCEEEEeccccC---CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCc
Confidence            2       5899999998542   11  123346789999999999999985532   247999999987554321    


Q ss_pred             ------------------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        160 ------------------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       160 ------------------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                                        ....|+.||.+.+.+++.++.+   .|+++++|.|+.| .+.
T Consensus       141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~  197 (337)
T 2c29_D          141 VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPF  197 (337)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCC
T ss_pred             ccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCC
Confidence                              2346999999999998887755   4899999999999 543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.84  E-value=3.5e-20  Score=151.28  Aligned_cols=157  Identities=17%  Similarity=0.160  Sum_probs=115.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +.+.++|++|||||+|+||.++++.|+++|++|++++|....                  .....+..|+.|..++..++
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------------~~~~~~~~Dl~d~~~~~~~~   75 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------------TGGEEVVGSLEDGQALSDAI   75 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------------SCCSEEESCTTCHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------------CCccEEecCcCCHHHHHHHH
Confidence            455678999999999999999999999999999999884221                  12223344555554443332


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-------
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-------  156 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-------  156 (223)
                             .++|+|||+|+....      +..+++..+++|+.++.++++++    .+.+.++||++||...+-       
T Consensus        76 -------~~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~  138 (347)
T 4id9_A           76 -------MGVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFL  138 (347)
T ss_dssp             -------TTCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSS
T ss_pred             -------hCCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCC
Confidence                   379999999996432      33456899999999999999987    445557999999965432       


Q ss_pred             ------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        157 ------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       157 ------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                            +......|+.+|.+.+.+++.++.+   .|++++.|.|+.+.
T Consensus       139 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~  183 (347)
T 4id9_A          139 PVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ  183 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred             CcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence                  2235678999999999999999887   48999999999874

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.84  E-value=1.3e-20  Score=153.99  Aligned_cols=166  Identities=14%  Similarity=0.075  Sum_probs=121.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH--------hCCccccccCCc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS--------KGGKAVPNYNSV   76 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~   76 (223)
                      +.+++|++|||||+|+||++++++|+++|++|++++|....     ...    ....+..        ....+..|+.|.
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~   91 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTG-----HQY----NLDEVKTLVSTEQWSRFCFIEGDIRDL   91 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC-----CHH----HHHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCC-----chh----hhhhhhhccccccCCceEEEEccCCCH
Confidence            45678999999999999999999999999999999884322     112    2222222        112233455544


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL  156 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  156 (223)
                      .++..+       +.++|+|||+||....    ..+.+++...+++|+.++.++++.+    .+.+.++||++||...+.
T Consensus        92 ~~~~~~-------~~~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg  156 (351)
T 3ruf_A           92 TTCEQV-------MKGVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYG  156 (351)
T ss_dssp             HHHHHH-------TTTCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGT
T ss_pred             HHHHHH-------hcCCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcC
Confidence            333322       3379999999996432    1234567789999999999999987    444557999999976553


Q ss_pred             cCC-----------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 GNF-----------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ~~~-----------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..+           ....|+.+|.+.+.+++.++.+.   |++++.+.|+.+
T Consensus       157 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v  205 (351)
T 3ruf_A          157 DHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNV  205 (351)
T ss_dssp             TCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSE
T ss_pred             CCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCce
Confidence            322           25789999999999999999885   799999999998

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.84  E-value=4.9e-21  Score=146.75  Aligned_cols=146  Identities=16%  Similarity=0.161  Sum_probs=111.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||++++++|+++|++|++++|+..         ..+..     .....+..|+.| .++       +.+.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~---------~~~~~-----~~~~~~~~D~~d~~~~-------~~~~   60 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE---------QVPQY-----NNVKAVHFDVDWTPEE-------MAKQ   60 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG---------GSCCC-----TTEEEEECCTTSCHHH-------HHTT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc---------chhhc-----CCceEEEecccCCHHH-------HHHH
Confidence            6999999999999999999999999999998432         22111     112233445555 322       3333


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------Cc
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-------QA  162 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------~~  162 (223)
                      +.++|+||||||....            ..+++|+.++..+++.+    ++.+.++||++||..+..+.+.       ..
T Consensus        61 ~~~~d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~  124 (219)
T 3dqp_A           61 LHGMDAIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALK  124 (219)
T ss_dssp             TTTCSEEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTH
T ss_pred             HcCCCEEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCccccccccccc
Confidence            4579999999997542            26778999999998887    4555679999999888776666       78


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      .|+.+|++++.+++      ...|+++++|.||.+ .+
T Consensus       125 ~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~  156 (219)
T 3dqp_A          125 DYYIAKHFADLYLT------KETNLDYTIIQPGALTEE  156 (219)
T ss_dssp             HHHHHHHHHHHHHH------HSCCCEEEEEEECSEECS
T ss_pred             HHHHHHHHHHHHHH------hccCCcEEEEeCceEecC
Confidence            99999999999887      357999999999999 54

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=9e-21  Score=155.77  Aligned_cols=173  Identities=14%  Similarity=0.111  Sum_probs=115.3

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHH--cCCeEEEEccCCCCCCC-CCChhhhhHHHHHHHHhCCccccccCCccch
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAE--RGASVVVNDLGGQRDGD-GKSSKAADTVVAEIRSKGGKAVPNYNSVVDG   79 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~--~G~~vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (223)
                      +++++++|++|||||+|+||+++++.|++  +|++|++++|....... .+..................+..|+.|..++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            34578899999999999999999999999  89999999985431100 0000000000000001112234455555444


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-  158 (223)
                      +.+      ...++|+|||+||....      +.++++..+++|+.++.++++.+    ++.+ ++||++||...+-.. 
T Consensus        84 ~~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~  146 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTK  146 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCC
T ss_pred             HHh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCC
Confidence            332      34689999999995432      34568899999999999999987    3333 569999995443221 


Q ss_pred             ---------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 ---------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ---------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                               .+...|+.+|++.+.+++.++.+     +.+..|.|+.+
T Consensus       147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v  189 (362)
T 3sxp_A          147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNV  189 (362)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSE
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCce
Confidence                     12456999999999999998877     55666666655

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.84  E-value=2.7e-20  Score=149.75  Aligned_cols=159  Identities=17%  Similarity=0.121  Sum_probs=117.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|+||++++++|+++|++|++++|....     .....       ......+..|+.|..+++++++.     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~-----   64 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATG-----KRENV-------PKGVPFFRVDLRDKEGVERAFRE-----   64 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSC-----CGGGS-------CTTCCEECCCTTCHHHHHHHHHH-----
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcC-----chhhc-------ccCeEEEECCCCCHHHHHHHHHh-----
Confidence            69999999999999999999999999999873221     11111       01122344566666555555443     


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------------
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN------------  158 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~------------  158 (223)
                      .++|+|||+|+....    ..+.++++..+++|+.++.++++.+.    +.+.++||++||.++.++.            
T Consensus        65 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~  136 (311)
T 2p5y_A           65 FRPTHVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWP  136 (311)
T ss_dssp             HCCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSC
T ss_pred             cCCCEEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCC
Confidence            279999999996432    12345678899999999999999873    3445799999997322221            


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .+...|+.+|++++.+++.++.++   |+++++|.||.+
T Consensus       137 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v  173 (311)
T 2p5y_A          137 PRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNV  173 (311)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccc
Confidence             245789999999999999999874   799999999988

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.84  E-value=1.1e-20  Score=151.94  Aligned_cols=158  Identities=19%  Similarity=0.123  Sum_probs=116.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||+|+||++++++|+++|++|++++|......     ...       ......+..|+.|.. ...       .
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~-------~~~~~~~~~Dl~d~~-~~~-------~   60 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR-----EFV-------NPSAELHVRDLKDYS-WGA-------G   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG-----GGS-------CTTSEEECCCTTSTT-TTT-------T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch-----hhc-------CCCceEEECccccHH-HHh-------h
Confidence            37999999999999999999999999999988433211     000       111112334554443 222       2


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------cC
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------GN  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------~~  158 (223)
                      +.. |+|||+|+...    ...+.++++..+++|+.++.++++.+    ++.+.++||++||...+-           +.
T Consensus        61 ~~~-d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~  131 (312)
T 3ko8_A           61 IKG-DVVFHFAANPE----VRLSTTEPIVHFNENVVATFNVLEWA----RQTGVRTVVFASSSTVYGDADVIPTPEEEPY  131 (312)
T ss_dssp             CCC-SEEEECCSSCS----SSGGGSCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             cCC-CEEEECCCCCC----chhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeCcHHHhCCCCCCCCCCCCCC
Confidence            223 99999999532    23455678899999999999999987    344457999999976542           22


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      .+...|+.+|++.+.+++.++.++   |+++++|.||.+ .+
T Consensus       132 ~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~  170 (312)
T 3ko8_A          132 KPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGP  170 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECT
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCc
Confidence            346889999999999999999886   899999999998 44

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.83  E-value=6.4e-20  Score=151.69  Aligned_cols=164  Identities=16%  Similarity=0.104  Sum_probs=119.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++.+++++|||||+|+||++++++|+++|++|++++|+.....      ...      ......+..|+.|..+++.++ 
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~------~~~v~~~~~Dl~d~~~~~~~~-   91 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED------MFCDEFHLVDLRVMENCLKVT-   91 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG------GTCSEEEECCTTSHHHHHHHH-
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch------hhc------cCCceEEECCCCCHHHHHHHh-
Confidence            3445689999999999999999999999999999998543211      000      011112334555544433332 


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--------  156 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~--------  156 (223)
                            .++|+|||+|+......   .+.+++++.+++|+.++.++++.+.    +.+.++||++||...+.        
T Consensus        92 ------~~~d~Vih~A~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~  158 (379)
T 2c5a_A           92 ------EGVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETT  158 (379)
T ss_dssp             ------TTCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSS
T ss_pred             ------CCCCEEEECceecCccc---ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCcc
Confidence                  37999999999643211   1134578899999999999999873    44457999999965433        


Q ss_pred             ----------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 ----------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ----------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                +......|+.+|++.+.+++.++.++   |+++++|.||.+
T Consensus       159 ~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v  206 (379)
T 2c5a_A          159 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNI  206 (379)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCE
T ss_pred             CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCce
Confidence                      22345789999999999999998774   799999999998

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.83  E-value=3.6e-20  Score=150.73  Aligned_cols=156  Identities=16%  Similarity=0.122  Sum_probs=110.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++|||||+|+||++++++|+++|++|++++|+...         .+.    +.. ....+..|+.|.+++.++      
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~----l~~~~~~~~~~Dl~d~~~~~~~------   74 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ---------IQR----LAYLEPECRVAEMLDHAGLERA------   74 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSC---------GGG----GGGGCCEEEECCTTCHHHHHHH------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHh---------hhh----hccCCeEEEEecCCCHHHHHHH------
Confidence            489999999999999999999999999999884321         111    111 112233455554333332      


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC--------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG--------  160 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~--------  160 (223)
                       +.++|+|||+||...      .+.+++++.+++|+.++.++++++.+.    +.++||++||...+.+.++        
T Consensus        75 -~~~~d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~  143 (342)
T 2x4g_A           75 -LRGLDGVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGL  143 (342)
T ss_dssp             -TTTCSEEEEC------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTC
T ss_pred             -HcCCCEEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCC
Confidence             336999999999643      234567889999999999999998553    4579999999877654443        


Q ss_pred             --------CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        161 --------QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       161 --------~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                              ...|+.+|++.+.+++.++.   + |+++++|.||.+ .+
T Consensus       144 ~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~  187 (342)
T 2x4g_A          144 FYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGE  187 (342)
T ss_dssp             CCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECS
T ss_pred             CCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECC
Confidence                    67899999999999999886   3 899999999998 44

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.83  E-value=3.5e-20  Score=149.25  Aligned_cols=156  Identities=16%  Similarity=0.160  Sum_probs=114.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||+|+||++++++|+++|+.|++..+. ..     .....       ......+..|+.| .++.++++     
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~-~~-----~~~~~-------~~~~~~~~~Dl~~-~~~~~~~~-----   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLS-SG-----NEEFV-------NEAARLVKADLAA-DDIKDYLK-----   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCS-SC-----CGGGS-------CTTEEEECCCTTT-SCCHHHHT-----
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCC-CC-----Chhhc-------CCCcEEEECcCCh-HHHHHHhc-----
Confidence            479999999999999999999999555544331 11     01110       1111223456666 55554433     


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------cC
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------GN  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------~~  158 (223)
                        ++|+|||+|+..    ....+.++++..+++|+.++.++++.+    .+.+.++||++||...+-           +.
T Consensus        63 --~~d~vih~a~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~  132 (313)
T 3ehe_A           63 --GAEEVWHIAANP----DVRIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPT  132 (313)
T ss_dssp             --TCSEEEECCCCC----CCC-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCC
T ss_pred             --CCCEEEECCCCC----ChhhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCC
Confidence              799999999953    223455678899999999999999986    444557999999976542           33


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+...|+.+|++.+.+++.++.++   |++++.+.|+.+
T Consensus       133 ~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v  168 (313)
T 3ehe_A          133 HPISLYGASKLACEALIESYCHTF---DMQAWIYRFANV  168 (313)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccc
Confidence            456789999999999999999884   899999999998

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.83  E-value=9.8e-20  Score=148.09  Aligned_cols=166  Identities=16%  Similarity=0.144  Sum_probs=115.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||++++++|+++|++|++++|....     .....+.+ +.... ....+..|+.|..+++.+++.    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   71 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS-----KRSVLPVI-ERLGGKHPTFVEGDIRNEALMTEILHD----   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC-----CTTHHHHH-HHHHTSCCEEEECCTTCHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCc-----chhHHHHH-HhhcCCcceEEEccCCCHHHHHHHhhc----
Confidence            69999999999999999999999999998763221     11112111 11111 111234466665554444432    


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------cC
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------GN  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------~~  158 (223)
                      + ++|+|||+||.....    ...+++.+.+++|+.++.++++.+    ++.+.++||++||.+.+.           +.
T Consensus        72 ~-~~D~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~  142 (338)
T 1udb_A           72 H-AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPT  142 (338)
T ss_dssp             T-TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCC
T ss_pred             c-CCCEEEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCC
Confidence            2 699999999964321    123446778999999999998875    444557999999976432           11


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       +....|+.+|++++.+++.++.+.  .++++..+.|+.+
T Consensus       143 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v  180 (338)
T 1udb_A          143 GTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNP  180 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeecee
Confidence             236789999999999999999884  3789999987655

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.83  E-value=2e-20  Score=152.45  Aligned_cols=171  Identities=19%  Similarity=0.189  Sum_probs=123.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcC-------CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERG-------ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV   76 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (223)
                      ++.++++++|||||+|+||++++++|+++|       ++|++++|......     .       ........+..|+.|.
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~-----~-------~~~~~~~~~~~Dl~d~   76 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----A-------GFSGAVDARAADLSAP   76 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC-----T-------TCCSEEEEEECCTTST
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc-----c-------ccCCceeEEEcCCCCH
Confidence            356789999999999999999999999999       89999988533211     0       0000111234566666


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCccc
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGL  155 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~  155 (223)
                      .+++.+++      +++|+|||+||....     .+.++++..+++|+.++.++++.+.+...+. +.++||++||.+.+
T Consensus        77 ~~~~~~~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~  145 (342)
T 2hrz_A           77 GEAEKLVE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVF  145 (342)
T ss_dssp             THHHHHHH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGC
T ss_pred             HHHHHHHh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhh
Confidence            65555443      479999999996431     2346788999999999999999987653221 24799999998655


Q ss_pred             ccC-C----------CCchhhhhHHHHHHHHHHHHhhhC--CCCeEEEEEe--CCCc
Q psy16220        156 LGN-F----------GQANYSAAKMALVGLSNTLSIEGE--KNNIHCNVIV--PTAA  197 (223)
Q Consensus       156 ~~~-~----------~~~~y~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~--Pg~v  197 (223)
                      .+. +          +...|+.+|++++.+++.++.+..  ...++++.|.  ||.+
T Consensus       146 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~  202 (342)
T 2hrz_A          146 GAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKP  202 (342)
T ss_dssp             CSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSC
T ss_pred             CCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCC
Confidence            432 2          567899999999999999987642  2346677776  7765

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.83  E-value=1.5e-19  Score=145.97  Aligned_cols=170  Identities=17%  Similarity=0.096  Sum_probs=112.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc-CCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL-GGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ||++|||||+|+||++++++|+++|++|++++| +.....   .......+. ........+..|+.|..+++.+++   
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~---   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKR---DVSFLTNLP-GASEKLHFFNADLSNPDSFAAAIE---   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----C---CCHHHHTST-THHHHEEECCCCTTCGGGGHHHHT---
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchh---HHHHHHhhh-ccCCceEEEecCCCCHHHHHHHHc---
Confidence            578999999999999999999999999999877 321100   011110000 001112234457777766655443   


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC-------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-------  160 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  160 (223)
                          .+|+|||+|+..   ..  ...+.+++++++|+.+++++++++.+.   .+.++||++||..+..+.+.       
T Consensus        74 ----~~d~vih~A~~~---~~--~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 ----GCVGIFHTASPI---DF--AVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             ----TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             ----CCCEEEEcCCcc---cC--CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCC
Confidence                589999999642   11  111224568999999999999998543   13579999999875543211       


Q ss_pred             ---------------CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        161 ---------------QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       161 ---------------~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                                     ...|+.||++.+.+++.++.+   .|+++++|.||.+ .+.
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~  194 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRF  194 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCC
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCC
Confidence                           126999999888887776654   5899999999999 554

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.83  E-value=2.4e-20  Score=152.86  Aligned_cols=163  Identities=13%  Similarity=0.120  Sum_probs=114.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++++++|||||+|+||++++++|+++| ++|++++|....       .....    +.  ...+..|+.|....+.+++
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-------~~~~~----~~--~~~~~~d~~~~~~~~~~~~  109 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-------TKFVN----LV--DLNIADYMDKEDFLIQIMA  109 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG-------GGGGG----TT--TSCCSEEEEHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc-------chhhc----cc--CceEeeecCcHHHHHHHHh
Confidence            4567899999999999999999999999 999999874221       00111    11  1113334444333333322


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-----  159 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-----  159 (223)
                      .  ..++++|+|||+||....      +.++++..+++|+.++.++++++.+    .+. +||++||...+.+.+     
T Consensus       110 ~--~~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~  176 (357)
T 2x6t_A          110 G--EEFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIE  176 (357)
T ss_dssp             T--CCCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCS
T ss_pred             h--cccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcC
Confidence            1  124689999999996543      2345788999999999999999854    344 999999976543322     


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 ------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                            ....|+.+|++.+.+++.++.+   .|++++.|.||.+
T Consensus       177 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v  217 (357)
T 2x6t_A          177 SREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNV  217 (357)
T ss_dssp             SGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEE
T ss_pred             CcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeE
Confidence                  2568999999999999999877   4899999999998

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.83  E-value=5.4e-20  Score=149.08  Aligned_cols=160  Identities=14%  Similarity=0.097  Sum_probs=118.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||+|+||++++++|+++|++|++++|.....     ...       +......+..|+.|..++++++++    
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~-------~~~~~~~~~~D~~~~~~~~~~~~~----   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH-----EDA-------ITEGAKFYNGDLRDKAFLRDVFTQ----   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-----GGG-------SCTTSEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc-----hhh-------cCCCcEEEECCCCCHHHHHHHHhh----
Confidence            4799999999999999999999999999998743221     111       111112234466655544444433    


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------C
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------N  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  158 (223)
                       .++|+|||+||.....    .+.++++..+++|+.++.++++.+    .+.+.++||++||...+..           .
T Consensus        66 -~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~  136 (330)
T 2c20_A           66 -ENIEAVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMT  136 (330)
T ss_dssp             -SCEEEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCC
T ss_pred             -cCCCEEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCC
Confidence             4799999999964321    134567889999999999999986    4445579999999655432           1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+...|+.+|++.+.+++.++.++   |++++.+.||.+
T Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v  172 (330)
T 2c20_A          137 NPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNV  172 (330)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcc
Confidence            245789999999999999998774   899999999988

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.82  E-value=3.3e-20  Score=142.74  Aligned_cols=151  Identities=15%  Similarity=0.077  Sum_probs=110.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +++|||||+|+||++++++|+++|++|++++|+...         ....    ......+..|+.|.+++++++      
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~----~~~~~~~~~Dl~d~~~~~~~~------   65 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK---------IKIE----NEHLKVKKADVSSLDEVCEVC------   65 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG---------CCCC----CTTEEEECCCTTCHHHHHHHH------
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc---------chhc----cCceEEEEecCCCHHHHHHHh------
Confidence            589999999999999999999999999999984332         1111    011122344555544443333      


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----------  159 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  159 (223)
                       .++|+|||+||.....          ...+++|+.++..+++.+    ++.+.++||++||..+..+.+          
T Consensus        66 -~~~d~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~  130 (227)
T 3dhn_A           66 -KGADAVISAFNPGWNN----------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEV  130 (227)
T ss_dssp             -TTCSEEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCS
T ss_pred             -cCCCEEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcc
Confidence             3699999999854211          126788999999988887    444557999999987765443          


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ....|+.+|++.+.+.+.++.+   .|++++.+.||.+
T Consensus       131 p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v  165 (227)
T 3dhn_A          131 PENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAAD  165 (227)
T ss_dssp             CGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSE
T ss_pred             hHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcc
Confidence            3678999999999999988864   5899999999998

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=2.4e-19  Score=147.84  Aligned_cols=171  Identities=15%  Similarity=0.030  Sum_probs=119.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH----HHhCCccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI----RSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      |++|||||+|+||++++++|+++|++|++++|+.....    ....+.+.+..    ......+..|+.|..++..+++.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  100 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFN----TGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE  100 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC----CTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccc----hhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHh
Confidence            58999999999999999999999999999998643311    11111111111    11112234566666555555544


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--------  157 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--------  157 (223)
                      .     ++|+|||+||....    ..+.++++..+++|+.++.++++.+.+...+ +.++||++||...+..        
T Consensus       101 ~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E  170 (375)
T 1t2a_A          101 V-----KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKE  170 (375)
T ss_dssp             H-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred             c-----CCCEEEECCCcccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCc
Confidence            3     69999999996432    1234567889999999999999998665331 1279999999766432        


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ---NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ---~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                         ..+...|+.+|++++.+++.++.++   ++.+..+.|+.+
T Consensus       171 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~  210 (375)
T 1t2a_A          171 TTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNH  210 (375)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCE
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccc
Confidence               2245789999999999999999875   577777776654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.82  E-value=2.1e-19  Score=146.61  Aligned_cols=171  Identities=11%  Similarity=0.027  Sum_probs=115.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      +.++++++|||||+|+||.+++++|+++|  ++|+..+|.....    ....+.....  ......+..|+.|..++..+
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~----~~~~l~~~~~--~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG----NLNNVKSIQD--HPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC----CGGGGTTTTT--CTTEEEEECCTTCHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc----chhhhhhhcc--CCCeEEEEcCCCCHHHHHHH
Confidence            45678899999999999999999999999  6777777643211    1111111000  01112234466666555555


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----  158 (223)
                      ++..     ++|+|||+|+.....    .+.++++..+++|+.++.++++.+    .+.+.++||++||...+...    
T Consensus        94 ~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~~~  160 (346)
T 4egb_A           94 IKER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGKTG  160 (346)
T ss_dssp             HHHH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCSSC
T ss_pred             Hhhc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCcCC
Confidence            5442     699999999975432    244667889999999999999987    44455789999997554332    


Q ss_pred             --------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 --------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 --------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                              .+...|+.+|.+.+.+++.++.+.   |++++.+.||.+
T Consensus       161 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v  204 (346)
T 4egb_A          161 RFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNN  204 (346)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             CcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecce
Confidence                    134789999999999999999874   799999999988

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.81  E-value=1.1e-19  Score=147.77  Aligned_cols=158  Identities=18%  Similarity=0.070  Sum_probs=110.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .++++++|||||+|+||++++++|+++|++|++++|+....     ...+..    + .....+..|+.|..+++++++.
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~l~~----~-~~~~~~~~Dl~d~~~~~~~~~~   87 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR-----REHLKD----H-PNLTFVEGSIADHALVNQLIGD   87 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-----GGGSCC----C-TTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc-----hhhHhh----c-CCceEEEEeCCCHHHHHHHHhc
Confidence            46788999999999999999999999999999998853221     111110    0 1112234566666555554443


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc----cC---
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL----GN---  158 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~----~~---  158 (223)
                           +++|+|||+||.....     +.++++  +++|+.++.++++.+.+    .+.++||++||...+.    ..   
T Consensus        88 -----~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~  151 (333)
T 2q1w_A           88 -----LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVR  151 (333)
T ss_dssp             -----HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBC
T ss_pred             -----cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCC
Confidence                 3799999999975432     334555  99999999999999854    3457999999976543    21   


Q ss_pred             -----CCC-chhhhhHHHHHHHHHH-HHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -----FGQ-ANYSAAKMALVGLSNT-LSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -----~~~-~~y~~sK~a~~~~~~~-l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           ... ..|+.+|++++.+++. ++        .+..|.|+.+
T Consensus       152 ~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v  189 (333)
T 2q1w_A          152 LDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANV  189 (333)
T ss_dssp             TTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEE
T ss_pred             cCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceE
Confidence                 233 7899999999999988 65        4556666655

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.81  E-value=2.5e-19  Score=150.35  Aligned_cols=161  Identities=15%  Similarity=0.059  Sum_probs=115.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH------------hCCccccccC
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS------------KGGKAVPNYN   74 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~   74 (223)
                      ..++++|||||+|+||++++++|+++|++|++++|+..      .....+.+.+.+..            ....+..|+.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~------~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~  140 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN------EEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE  140 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS------HHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC------hHHHHHHHHHHHHHhccccccccccCceEEEeCCCC
Confidence            45689999999999999999999999999999998422      11123333333222            2223344666


Q ss_pred             CccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         75 SVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      |..++.        .++++|+||||||....       .++++..+++|+.++.++++.+.+     +..+||++||...
T Consensus       141 d~~~l~--------~~~~~d~Vih~A~~~~~-------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~  200 (427)
T 4f6c_A          141 CMDDVV--------LPENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  200 (427)
T ss_dssp             --CCCC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG
T ss_pred             CcccCC--------CcCCCCEEEECCcccCC-------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh
Confidence            655555        56799999999996531       256788999999999999999855     3479999999776


Q ss_pred             -c-----------------ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        155 -L-----------------LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       155 -~-----------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .                 .+......|+.+|++.+.+++.++.    .|+++++|.||.|
T Consensus       201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v  257 (427)
T 4f6c_A          201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNL  257 (427)
T ss_dssp             GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCE
T ss_pred             CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCee
Confidence             0                 0122678899999999999998763    5899999999999

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.81  E-value=1.2e-19  Score=145.94  Aligned_cols=158  Identities=15%  Similarity=0.129  Sum_probs=118.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +|++|||||+|+||++++++|+++  |++|++++|+...         . .    +......+..|+.|..++++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~---------~-~----~~~~~~~~~~D~~d~~~~~~~~~~~   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN---------T-D----VVNSGPFEVVNALDFNQIEHLVEVH   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS---------C-H----HHHSSCEEECCTTCHHHHHHHHHHT
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc---------c-c----ccCCCceEEecCCCHHHHHHHHhhc
Confidence            368999999999999999999999  8999999884221         1 1    1122334455666655555544432


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--------  158 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~--------  158 (223)
                           ++|+|||+||....     ...++++..+++|+.++.++++.+    .+.+.++||++||...+.+.        
T Consensus        68 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~e  133 (312)
T 2yy7_A           68 -----KITDIYLMAALLSA-----TAEKNPAFAWDLNMNSLFHVLNLA----KAKKIKKIFWPSSIAVFGPTTPKENTPQ  133 (312)
T ss_dssp             -----TCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHH----HTTSCSEEECCEEGGGCCTTSCSSSBCS
T ss_pred             -----CCCEEEECCccCCC-----chhhChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHHhCCCCCCCCccc
Confidence                 79999999996432     123567889999999999999987    34455799999997654331        


Q ss_pred             ----CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 ----FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ----~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                          .....|+.+|.+.+.+++.++.++   |++++++.||.+
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v  173 (312)
T 2yy7_A          134 YTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGL  173 (312)
T ss_dssp             SCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEE
T ss_pred             cCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeE
Confidence                235789999999999999998774   899999999988

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.81  E-value=3.1e-19  Score=147.40  Aligned_cols=164  Identities=13%  Similarity=0.013  Sum_probs=116.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++++|||||+|+||++++++|+++| ++|++++|.....     ...+.    . ......+..|+.|.++      
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-----~~~l~----~-~~~v~~~~~Dl~d~~~------   92 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE-----KINVP----D-HPAVRFSETSITDDAL------   92 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC-----GGGSC----C-CTTEEEECSCTTCHHH------
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc-----hhhcc----C-CCceEEEECCCCCHHH------
Confidence            4678999999999999999999999999 9999998843321     11110    0 0011112334444332      


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccc-------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLL-------  156 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~-------  156 (223)
                       +.+.+.++|+|||+|+.....    .+.++++..+++|+.++.++++++    .+. +.++||++||...+-       
T Consensus        93 -l~~~~~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~  163 (377)
T 2q1s_A           93 -LASLQDEYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDA  163 (377)
T ss_dssp             -HHHCCSCCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC-----------
T ss_pred             -HHHHhhCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCc
Confidence             222334899999999964321    233567889999999999999987    444 457999999965321       


Q ss_pred             ---------cC-CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 ---------GN-FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ---------~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                               +. .+...|+.+|++.+.+++.++.++   |+++++|.||.+
T Consensus       164 ~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v  211 (377)
T 2q1s_A          164 KATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNV  211 (377)
T ss_dssp             ---CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             CcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccE
Confidence                     22 446789999999999999998875   899999999998

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.80  E-value=4.1e-19  Score=144.17  Aligned_cols=166  Identities=17%  Similarity=-0.001  Sum_probs=116.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH--HhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR--SKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .++++|||||+|+||++++++|+++|++|++++|.....    ....    .+.+.  .....+..|+.|..++.++++.
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   84 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD----TRWR----LRELGIEGDIQYEDGDMADACSVQRAVIK   84 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC----CCHH----HHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccc----cccc----hhhccccCceEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999853321    0111    11110  1112234466665555555544


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCC-----
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNF-----  159 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~-----  159 (223)
                      .     ++|+|||+||....    ..+.++++..+++|+.++.++++.+.+.    + .++||++||...+.+.+     
T Consensus        85 ~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~  151 (335)
T 1rpn_A           85 A-----QPQEVYNLAAQSFV----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQD  151 (335)
T ss_dssp             H-----CCSEEEECCSCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBC
T ss_pred             c-----CCCEEEECccccch----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCC
Confidence            3     79999999996432    1122456789999999999999998443    3 27999999975543221     


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 ------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                            +...|+.+|++.+.+++.++.++   ++.+..+.|+.+
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v  192 (335)
T 1rpn_A          152 ENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNH  192 (335)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             cccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcc
Confidence                  24689999999999999998775   677888888776

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.80  E-value=1.2e-18  Score=143.29  Aligned_cols=170  Identities=15%  Similarity=0.082  Sum_probs=113.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH---HhCCccccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR---SKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      |++|||||+|+||++++++|+++|++|++++|+....    ....++.+.+...   .....+..|+.|..++.++++..
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSF----NTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccc----chHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc
Confidence            6899999999999999999999999999998843210    0011111111111   11112344666655555555443


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG---------  157 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~---------  157 (223)
                           ++|+|||+||....    ..+.++++..+++|+.++.++++.+.+...+ +.++||++||.+.+.+         
T Consensus        78 -----~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~  147 (372)
T 1db3_A           78 -----QPDEVYNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKET  147 (372)
T ss_dssp             -----CCSEEEECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             -----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCcc
Confidence                 69999999996542    2334567889999999999999998665332 2379999999755432         


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCC
Q psy16220        158 --NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTA  196 (223)
Q Consensus       158 --~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~  196 (223)
                        ..+...|+.+|++++.+++.++.++   ++.+..+.|..
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~  185 (372)
T 1db3_A          148 TPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFN  185 (372)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECC
Confidence              1246789999999999999999885   45555555443

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=6.9e-19  Score=156.14  Aligned_cols=174  Identities=17%  Similarity=0.139  Sum_probs=119.2

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   82 (223)
                      .+.+++|++|||||+|+||++++++|+++|++|++++|....     .....+. .+.+.. ....+..|+.|..+++++
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~-l~~~~~~~v~~v~~Dl~d~~~l~~~   79 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNS-----TYDSVAR-LEVLTKHHIPFYEVDLCDRKGLEKV   79 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC-----CTHHHHH-HHHHHTSCCCEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcc-----hHHHHHH-HhhccCCceEEEEcCCCCHHHHHHH
Confidence            345778999999999999999999999999999999884321     1111111 111211 122234566665555444


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----  157 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----  157 (223)
                      ++.    + ++|+|||+||......    ..+...+.+++|+.++.++++.+    ++.+.++||++||.+.+-.     
T Consensus        80 ~~~----~-~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~  146 (699)
T 1z45_A           80 FKE----Y-KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFP  146 (699)
T ss_dssp             HHH----S-CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGST
T ss_pred             HHh----C-CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCcccc
Confidence            433    2 7999999999643211    12334568999999999998876    4445579999999764321     


Q ss_pred             ----------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ----------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ----------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                ......|+.+|++++.+++.++.+. +.++++..+.|+.+
T Consensus       147 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~v  195 (699)
T 1z45_A          147 NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNP  195 (699)
T ss_dssp             TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEE
T ss_pred             ccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccc
Confidence                      1234689999999999999998875 46899999998877

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.80  E-value=2.1e-19  Score=146.60  Aligned_cols=162  Identities=14%  Similarity=0.101  Sum_probs=115.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      |++|||||+|+||++++++|+++  |++|++++|.....    .........   ......+..|+.|..+++.+     
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~-----   72 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG----NKANLEAIL---GDRVELVVGDIADAELVDKL-----   72 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC----CGGGTGGGC---SSSEEEEECCTTCHHHHHHH-----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC----ChhHHhhhc---cCCeEEEECCCCCHHHHHHH-----
Confidence            58999999999999999999999  89999998853211    111111110   00111223355544333322     


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------  156 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------  156 (223)
                        +..+|+|||+||....    +.+.++++..+++|+.++.++++.+.+.    + ++||++||...+.           
T Consensus        73 --~~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           73 --AAKADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             --HTTCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             --hhcCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccc
Confidence              2346999999996431    1233557789999999999999998654    3 4999999965331           


Q ss_pred             ------------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 ------------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                  +..+...|+.+|++.+.+++.++.++   |+++++|.||.+
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v  191 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNN  191 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCE
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeecee
Confidence                        22356789999999999999999885   799999999998

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.80  E-value=5.9e-19  Score=133.41  Aligned_cols=148  Identities=17%  Similarity=0.102  Sum_probs=104.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++++|||||+|+||++++++|+++|++|++++|+...         .....   ......+..|+.|.+++.++      
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~---------~~~~~---~~~~~~~~~D~~~~~~~~~~------   64 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR---------LPSEG---PRPAHVVVGDVLQAADVDKT------   64 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG---------SCSSS---CCCSEEEESCTTSHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh---------ccccc---CCceEEEEecCCCHHHHHHH------
Confidence            3789999999999999999999999999999884322         11100   01111233455544333332      


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----CCchh
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----GQANY  164 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----~~~~y  164 (223)
                       +..+|+|||+||.....   +.        .++|+.++..+++.+    ++.+.++||++||.......+    ....|
T Consensus        65 -~~~~d~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y  128 (206)
T 1hdo_A           65 -VAGQDAVIVLLGTRNDL---SP--------TTVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAV  128 (206)
T ss_dssp             -HTTCSEEEECCCCTTCC---SC--------CCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHH
T ss_pred             -HcCCCEEEECccCCCCC---Cc--------cchHHHHHHHHHHHH----HHhCCCeEEEEeeeeeccCcccccccchhH
Confidence             23589999999965431   11        137788888887776    444557999999986655444    56789


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +.+|++++.+++.       .++++++|.||.+
T Consensus       129 ~~~K~~~e~~~~~-------~~i~~~~lrp~~~  154 (206)
T 1hdo_A          129 TDDHIRMHKVLRE-------SGLKYVAVMPPHI  154 (206)
T ss_dssp             HHHHHHHHHHHHH-------TCSEEEEECCSEE
T ss_pred             HHHHHHHHHHHHh-------CCCCEEEEeCCcc
Confidence            9999999998742       5899999999998

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.80  E-value=7.4e-19  Score=134.78  Aligned_cols=148  Identities=16%  Similarity=0.144  Sum_probs=104.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|+||++++++|+++|++|++++|         +......+.   ......+..|+.|..+         +.+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~~---~~~~~~~~~D~~d~~~---------~~~   60 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVR---------DPQKAADRL---GATVATLVKEPLVLTE---------ADL   60 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHT---CTTSEEEECCGGGCCH---------HHH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe---------ccccccccc---CCCceEEecccccccH---------hhc
Confidence            5999999999999999999999999999988         444333211   1122233446655554         334


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----------
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG----------  160 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  160 (223)
                      +++|+|||+||......           ...+|+.++..+++.    +++.+ +++|++||.++..+.+.          
T Consensus        61 ~~~d~vi~~ag~~~~~~-----------~~~~n~~~~~~l~~a----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~  124 (224)
T 3h2s_A           61 DSVDAVVDALSVPWGSG-----------RGYLHLDFATHLVSL----LRNSD-TLAVFILGSASLAMPGADHPMILDFPE  124 (224)
T ss_dssp             TTCSEEEECCCCCTTSS-----------CTHHHHHHHHHHHHT----CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCG
T ss_pred             ccCCEEEECCccCCCcc-----------hhhHHHHHHHHHHHH----HHHcC-CcEEEEecceeeccCCCCccccccCCC
Confidence            67999999999752111           124577666655555    46666 89999999877665444          


Q ss_pred             ----CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        161 ----QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       161 ----~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                          ...|+.+|++.+.+ +.+.   ...|++++.|.||.+ ++
T Consensus       125 ~~~~~~~y~~sK~~~e~~-~~~~---~~~~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          125 SAASQPWYDGALYQYYEY-QFLQ---MNANVNWIGISPSEAFPS  164 (224)
T ss_dssp             GGGGSTTHHHHHHHHHHH-HHHT---TCTTSCEEEEEECSBCCC
T ss_pred             CCccchhhHHHHHHHHHH-HHHH---hcCCCcEEEEcCccccCC
Confidence                67899999998854 2222   357999999999999 44

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.80  E-value=3.3e-19  Score=144.93  Aligned_cols=163  Identities=13%  Similarity=0.052  Sum_probs=115.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc---C---CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER---G---ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~---G---~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++|||||+|+||++++++|+++   |   ++|++++|.....    +...+..+..  ......+..|+.|..+++++  
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~----~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~--   73 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG----NRANLAPVDA--DPRLRFVHGDIRDAGLLARE--   73 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC----CGGGGGGGTT--CTTEEEEECCTTCHHHHHHH--
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccC----chhhhhhccc--CCCeEEEEcCCCCHHHHHHH--
Confidence            6999999999999999999997   8   9999998843211    1111111100  00111223455544333322  


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc--------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL--------  156 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~--------  156 (223)
                           +.++|+|||+||....    +.+.++++..+++|+.++.++++.+.+.    +.++||++||...+.        
T Consensus        74 -----~~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~  140 (337)
T 1r6d_A           74 -----LRGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWT  140 (337)
T ss_dssp             -----TTTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBC
T ss_pred             -----hcCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCC
Confidence                 3689999999996432    1233456789999999999999998553    447999999965432        


Q ss_pred             ---cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 ---GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 ---~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                         +..+...|+.+|++.+.+++.++.++   |++++.+.||.+
T Consensus       141 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v  181 (337)
T 1r6d_A          141 ESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNN  181 (337)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeee
Confidence               23456789999999999999999875   799999999988

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.80  E-value=1.8e-18  Score=142.88  Aligned_cols=161  Identities=16%  Similarity=0.054  Sum_probs=113.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH----hCCccccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      |++|||||+|+||.++++.|+++|++|++++|+......    ..++.+......    ....+..|+.|..++..+++.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  104 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNT----QRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV  104 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC----TTTTTTC--------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccc----hhhhhhhhccccccccceEEEECCCCCHHHHHHHHHh
Confidence            589999999999999999999999999999986443110    011111111111    111234466665555555544


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCcEEEEecCcccc--------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-QNYGRLVMTASNSGLL--------  156 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~--------  156 (223)
                      .     ++|+|||+||....    ..+.++++..+++|+.++.++++.+.+...+ .+.++||++||...+.        
T Consensus       105 ~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E  175 (381)
T 1n7h_A          105 I-----KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  175 (381)
T ss_dssp             H-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             c-----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence            3     79999999996432    1234568889999999999999999887654 2346999999976543        


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHhhhC
Q psy16220        157 --GNFGQANYSAAKMALVGLSNTLSIEGE  183 (223)
Q Consensus       157 --~~~~~~~y~~sK~a~~~~~~~l~~e~~  183 (223)
                        +..+...|+.+|++++.+++.++.++.
T Consensus       176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          176 TTPFHPRSPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence              234567899999999999999998763

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.79  E-value=6.3e-19  Score=141.95  Aligned_cols=149  Identities=13%  Similarity=0.090  Sum_probs=91.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +|++|||||+|+||++++++|+++|++|++++|+..         .         . + .+..|+.|..++..+++..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~---------~-~-~~~~Dl~d~~~~~~~~~~~--   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA---------R---------P-K-FEQVNLLDSNAVHHIIHDF--   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------------CHHHHHHH--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC---------C---------C-C-eEEecCCCHHHHHHHHHhh--
Confidence            578999999999999999999999999999987311         1         0 1 3456777777666666543  


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc----------C
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG----------N  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~----------~  158 (223)
                         ++|+|||+||....    ..+.+++++.+++|+.++.++++.+.+    .+ ++||++||...+.+          .
T Consensus        60 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~  127 (315)
T 2ydy_A           60 ---QPHVIVHCAAERRP----DVVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIP  127 (315)
T ss_dssp             ---CCSEEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCC
T ss_pred             ---CCCEEEECCcccCh----hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCC
Confidence               79999999996542    124567889999999999999999854    23 59999999876543          3


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEe
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIV  193 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~  193 (223)
                      .+...|+.+|++++.+++.++.++  ..+|.+.|.
T Consensus       128 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~  160 (315)
T 2ydy_A          128 APLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY  160 (315)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE
T ss_pred             CCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee
Confidence            456789999999999999986543  244555544

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.79  E-value=1.1e-18  Score=140.74  Aligned_cols=148  Identities=16%  Similarity=0.113  Sum_probs=113.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++++|||||+|+||++++++|+++|++|++++|.         .                 ..|+.|..++.++++..  
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~---------~-----------------~~D~~d~~~~~~~~~~~--   54 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR---------D-----------------ELNLLDSRAVHDFFASE--   54 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT---------T-----------------TCCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecC---------c-----------------cCCccCHHHHHHHHHhc--
Confidence            5789999999999999999999999999987651         0                 24555555444444432  


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  157 (223)
                         ++|+|||+|+....   .....++.+..+++|+.++.++++.+.    +.+.+++|++||...+-+           
T Consensus        55 ---~~d~vih~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~  124 (321)
T 1e6u_A           55 ---RIDQVYLAAAKVGG---IVANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIYPKLAKQPMAESEL  124 (321)
T ss_dssp             ---CCSEEEECCCCCCC---HHHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGSCTTCCSSBCGGGT
T ss_pred             ---CCCEEEEcCeecCC---cchhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHcCCCCCCCcCcccc
Confidence               69999999996431   112234567889999999999999874    344569999999765421           


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 -----NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 -----~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           .|....|+.+|.+.+.+++.++.++   |+++++|.||.+
T Consensus       125 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v  166 (321)
T 1e6u_A          125 LQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNL  166 (321)
T ss_dssp             TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             ccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCc
Confidence                 1113589999999999999998774   899999999998

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.79  E-value=2.2e-19  Score=146.02  Aligned_cols=167  Identities=19%  Similarity=0.163  Sum_probs=111.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +|++|||||+|+||++++++|+++|++|+++.|+....      ..... ...+....  ..+..|+.|..+++.+++  
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~------~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQ------KKVSH-LLELQELGDLKIFRADLTDELSFEAPIA--   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCT------TTTHH-HHHHGGGSCEEEEECCTTTSSSSHHHHT--
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchh------hhHHH-HHhcCCCCcEEEEecCCCChHHHHHHHc--
Confidence            68999999999999999999999999999887743211      11111 11222111  123457777666655443  


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC--------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN--------  158 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~--------  158 (223)
                           .+|+|||+|+....   .  ..+..++.+++|+.++.++++++.+..   +.++||++||.++..+.        
T Consensus        80 -----~~D~Vih~A~~~~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~  146 (338)
T 2rh8_A           80 -----GCDFVFHVATPVHF---A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLV  146 (338)
T ss_dssp             -----TCSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCC
T ss_pred             -----CCCEEEEeCCccCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcc
Confidence                 58999999985421   1  112234589999999999999885431   25799999997632210        


Q ss_pred             -------------C---CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        159 -------------F---GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       159 -------------~---~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                                   +   ....|+.||++.+.+++.++.+   .|+++++|.||.| .+.
T Consensus       147 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~  202 (338)
T 2rh8_A          147 VDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSS  202 (338)
T ss_dssp             CCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCC
T ss_pred             cChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCC
Confidence                         0   1126999999999998887765   4899999999999 543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=9.5e-20  Score=138.85  Aligned_cols=148  Identities=10%  Similarity=0.052  Sum_probs=109.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .++++|||||+|+||++++++|+++|+  +|++++|+...         .       ......+..|+.|.+++++    
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~-------~~~~~~~~~D~~~~~~~~~----   63 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------E-------HPRLDNPVGPLAELLPQLD----   63 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------C-------CTTEECCBSCHHHHGGGCC----
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------c-------CCCceEEeccccCHHHHHH----
Confidence            467999999999999999999999998  99999884332         0       0011122334433332222    


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                         .+  +|+|||+||....      +.+++++.+++|+.++..+++.+.    +.+.++||++||.....+  +...|+
T Consensus        64 ---~~--~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~--~~~~y~  126 (215)
T 2a35_A           64 ---GS--IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYN  126 (215)
T ss_dssp             ---SC--CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHH
T ss_pred             ---hh--hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC--CccHHH
Confidence               22  9999999996432      134678899999999999999873    445579999999776542  456899


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeE-EEEEeCCCc-cc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIH-CNVIVPTAA-SR  199 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~-v~~v~Pg~v-t~  199 (223)
                      .+|++++.+++.       .|++ ++.|.||.+ .+
T Consensus       127 ~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~  155 (215)
T 2a35_A          127 RVKGELEQALQE-------QGWPQLTIARPSLLFGP  155 (215)
T ss_dssp             HHHHHHHHHHTT-------SCCSEEEEEECCSEEST
T ss_pred             HHHHHHHHHHHH-------cCCCeEEEEeCceeeCC
Confidence            999999988764       3888 999999999 44

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.79  E-value=2.2e-18  Score=131.70  Aligned_cols=147  Identities=15%  Similarity=0.142  Sum_probs=100.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|+||++++++|+++|++|++++|         +......+    ......+..|+.|..+         +.+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~----~~~~~~~~~D~~d~~~---------~~~   59 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVR---------NAGKITQT----HKDINILQKDIFDLTL---------SDL   59 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CSHHHHHH----CSSSEEEECCGGGCCH---------HHH
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEc---------Cchhhhhc----cCCCeEEeccccChhh---------hhh
Confidence            6999999999999999999999999999988         33333221    1222233446655554         334


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----------
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG----------  160 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  160 (223)
                      .++|+|||+||....             ..+.|+.++..+++.    +++.+.+++|++||..+..+.++          
T Consensus        60 ~~~d~vi~~ag~~~~-------------~~~~~~~~~~~l~~a----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  122 (221)
T 3ew7_A           60 SDQNVVVDAYGISPD-------------EAEKHVTSLDHLISV----LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGL  122 (221)
T ss_dssp             TTCSEEEECCCSSTT-------------TTTSHHHHHHHHHHH----HCSCCSSEEEEECCCC-----------------
T ss_pred             cCCCEEEECCcCCcc-------------ccchHHHHHHHHHHH----HHhcCCceEEEEecceEEEcCCCCccccccCCC
Confidence            679999999997321             123455555555554    56666789999999887665432          


Q ss_pred             --CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        161 --QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       161 --~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                        ...|+.+|++.+.+ +.+..  ...|++++.|.||.+ ++
T Consensus       123 ~~~~~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~  161 (221)
T 3ew7_A          123 REAPYYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEP  161 (221)
T ss_dssp             --CCCSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCC
T ss_pred             CCHHHHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecC
Confidence              45699999999987 33332  157899999999999 44

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.78  E-value=5.8e-19  Score=145.36  Aligned_cols=161  Identities=12%  Similarity=0.091  Sum_probs=114.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccC-CccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYN-SVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   83 (223)
                      +++++++|||||+|+||++++++|+++ |++|++++|+...         .....+  ......+..|+. |...+..++
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~---------~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~   89 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDR---------LGDLVK--HERMHFFEGDITINKEWVEYHV   89 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTT---------TGGGGG--STTEEEEECCTTTCHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhh---------hhhhcc--CCCeEEEeCccCCCHHHHHHHh
Confidence            456789999999999999999999998 9999999984322         111100  011122334555 444333333


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----  158 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----  158 (223)
                      +       ++|+|||+|+.....    ...++..+.+++|+.++.++++.+    ++.+ .+||++||...+-..     
T Consensus        90 ~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~-~~~v~~SS~~vyg~~~~~~~  153 (372)
T 3slg_A           90 K-------KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCADEQF  153 (372)
T ss_dssp             H-------HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHH----HHHT-CEEEEECCGGGGBSCCCSSB
T ss_pred             c-------cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHH----HHhC-CcEEEeCcHHHhCCCCCCCC
Confidence            2       589999999965431    123456788999999999999987    3334 799999995433211     


Q ss_pred             -------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                   .....|+.+|.+.+.+++.++.+    |++++.|.|+.+
T Consensus       154 ~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v  201 (372)
T 3slg_A          154 DPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNW  201 (372)
T ss_dssp             CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSE
T ss_pred             CccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccc
Confidence                         23347999999999999999866    899999999998

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.78  E-value=2.9e-18  Score=138.09  Aligned_cols=153  Identities=18%  Similarity=0.213  Sum_probs=114.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++|||||+|+||++++++|+++  |++|++++|.....         .        ....+..|+.|..++.++++.   
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---------~--------~~~~~~~D~~d~~~~~~~~~~---   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT---------G--------GIKFITLDVSNRDEIDRAVEK---   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC---------T--------TCCEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc---------c--------CceEEEecCCCHHHHHHHHhh---
Confidence            3899999999999999999998  89999998743211         0        122344566665555544443   


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----------  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  158 (223)
                        .++|+|||+|+....     ...++++..+++|+.++.++++.+.    +.+.++||++||...+.+.          
T Consensus        61 --~~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~  129 (317)
T 3ajr_A           61 --YSIDAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSIT  129 (317)
T ss_dssp             --TTCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSS
T ss_pred             --cCCcEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccc
Confidence              279999999996432     1235578899999999999999874    3455799999997765432          


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 --FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 --~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        .+...|+.+|++.+.+++.++.+   .|+++++|.|+.+
T Consensus       130 ~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~  167 (317)
T 3ajr_A          130 ITRPRTMFGVTKIAAELLGQYYYEK---FGLDVRSLRYPGI  167 (317)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEE
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHh---cCCeEEEEecCcE
Confidence              13678999999999999998876   4799999986665

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.78  E-value=1.8e-18  Score=137.78  Aligned_cols=141  Identities=18%  Similarity=0.251  Sum_probs=108.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      -+++|||||+|+||++++++|+++|++|++++|         +                  ..|+.|..+++++++..  
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r---------~------------------~~Dl~d~~~~~~~~~~~--   62 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDV---------Q------------------DLDITNVLAVNKFFNEK--   62 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECT---------T------------------TCCTTCHHHHHHHHHHH--
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccC---------c------------------cCCCCCHHHHHHHHHhc--
Confidence            479999999999999999999999999999977         2                  24555655555544433  


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---------  159 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  159 (223)
                         ++|+|||+||....    +.+.++++..+++|+.++.++++.+.+    .+ .+||++||...+.+.+         
T Consensus        63 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~~iv~~SS~~v~~~~~~~~~~E~~~  130 (292)
T 1vl0_A           63 ---KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFDGEAKEPITEFDE  130 (292)
T ss_dssp             ---CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSCCSSCBCTTSC
T ss_pred             ---CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEechHHeECCCCCCCCCCCCC
Confidence               79999999996432    123466889999999999999999854    33 3999999976543322         


Q ss_pred             --CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 --GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 --~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        +...|+.+|++.+.+++.++.       .+..|.|+.+
T Consensus       131 ~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v  163 (292)
T 1vl0_A          131 VNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWL  163 (292)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSE
T ss_pred             CCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeee
Confidence              357899999999999998764       2677788877

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.77  E-value=3e-18  Score=137.45  Aligned_cols=156  Identities=12%  Similarity=0.104  Sum_probs=112.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||++++++|+++| ++|++++|....       ....    .+..  ..+..|+.|...    ++.+.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-------~~~~----~~~~--~~~~~d~~~~~~----~~~~~~~   63 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-------TKFV----NLVD--LNIADYMDKEDF----LIQIMAG   63 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-------GGGH----HHHT--SCCSEEEEHHHH----HHHHHTT
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCC-------chhh----hcCc--ceeccccccHHH----HHHHHhc
Confidence            48999999999999999999999 999999873221       1111    1111  113334443332    3333322


Q ss_pred             --cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC--------
Q psy16220         90 --FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF--------  159 (223)
Q Consensus        90 --~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--------  159 (223)
                        ++++|+|||+|+....      +.++++..+++|+.++.++++.+.+    .+. ++|++||...+.+.+        
T Consensus        64 ~~~~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~  132 (310)
T 1eq2_A           64 EEFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESRE  132 (310)
T ss_dssp             CCCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGG
T ss_pred             cccCCCcEEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCC
Confidence              2369999999996543      2345788999999999999998843    344 999999976543221        


Q ss_pred             ---CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 ---GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ---~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                         +...|+.+|.+.+.+++.++.+   .|++++.|.||.+
T Consensus       133 ~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v  170 (310)
T 1eq2_A          133 YEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNV  170 (310)
T ss_dssp             GCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcE
Confidence               2568999999999999999876   4899999999998

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.77  E-value=3.5e-18  Score=139.03  Aligned_cols=159  Identities=13%  Similarity=0.082  Sum_probs=111.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++|||||+|+||++++++|+++ |++|++++|+..         ..+.+..  ......+..|+.|..   ..++++.+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~---------~~~~~~~--~~~~~~~~~D~~~~~---~~~~~~~~   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD---------AISRFLN--HPHFHFVEGDISIHS---EWIEYHVK   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG---------GGGGGTT--CTTEEEEECCTTTCS---HHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcc---------hHHHhhc--CCCeEEEeccccCcH---HHHHhhcc
Confidence            37999999999999999999998 899999988422         2111100  001112334555532   22222222


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC---------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF---------  159 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  159 (223)
                         ++|+|||+||.....    ...++++.++++|+.++.++++.+.    +.+ ++||++||...+...+         
T Consensus        67 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~  134 (345)
T 2bll_A           67 ---KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHS  134 (345)
T ss_dssp             ---HCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTC
T ss_pred             ---CCCEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCccc
Confidence               489999999964321    1134567899999999999998873    334 7999999965432211         


Q ss_pred             ---------CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 ---------GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ---------~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                               ....|+.+|.+.+.+++.++.+.   |+++++|.||.+
T Consensus       135 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v  178 (345)
T 2bll_A          135 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNW  178 (345)
T ss_dssp             CCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSE
T ss_pred             ccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcc
Confidence                     12379999999999999998774   899999999998

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.77  E-value=1.5e-18  Score=134.40  Aligned_cols=145  Identities=12%  Similarity=0.006  Sum_probs=90.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ..|++|||||+|+||++++++|+++| ++|++++|+...         .....   ......+..|+.|.+++++++   
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~---------~~~~~---~~~~~~~~~Dl~d~~~~~~~~---   86 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK---------IHKPY---PTNSQIIMGDVLNHAALKQAM---   86 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG---------SCSSC---CTTEEEEECCTTCHHHHHHHH---
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh---------hcccc---cCCcEEEEecCCCHHHHHHHh---
Confidence            34799999999999999999999999 899999884332         11100   011122344665554444433   


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch---
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN---  163 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~---  163 (223)
                          ..+|+||||+|...                      ....++.+++.+++.+.++||++||..+..+.++...   
T Consensus        87 ----~~~D~vv~~a~~~~----------------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~  140 (236)
T 3qvo_A           87 ----QGQDIVYANLTGED----------------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN  140 (236)
T ss_dssp             ----TTCSEEEEECCSTT----------------------HHHHHHHHHHHHHHTTCCEEEEECCCCC------------
T ss_pred             ----cCCCEEEEcCCCCc----------------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch
Confidence                36899999998411                      1123557778888887789999999887665544211   


Q ss_pred             ------hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        164 ------YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       164 ------y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                            +...+...+       ..+.+.||++++|.||++ ++.
T Consensus       141 ~~~~~~~~~~~~~~~-------~~l~~~gi~~~~vrPg~i~~~~  177 (236)
T 3qvo_A          141 NAVIGEPLKPFRRAA-------DAIEASGLEYTILRPAWLTDED  177 (236)
T ss_dssp             ----CGGGHHHHHHH-------HHHHTSCSEEEEEEECEEECCS
T ss_pred             hhcccchHHHHHHHH-------HHHHHCCCCEEEEeCCcccCCC
Confidence                  112222211       223367999999999999 543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.76  E-value=3.6e-18  Score=139.16  Aligned_cols=161  Identities=12%  Similarity=0.018  Sum_probs=111.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .++++++|||||+|+||++++++|+++|++|++++|.....     .........  ......+..|+.+.         
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~--~~~~~~~~~D~~~~---------   87 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-----KRNVEHWIG--HENFELINHDVVEP---------   87 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-----GGGTGGGTT--CTTEEEEECCTTSC---------
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccc-----hhhhhhhcc--CCceEEEeCccCCh---------
Confidence            35678999999999999999999999999999998843221     111111100  00011122233332         


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---------  156 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---------  156 (223)
                         .+.++|+|||+|+......    ..++++..+++|+.++.++++++..    .+ .++|++||...+-         
T Consensus        88 ---~~~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E  155 (343)
T 2b69_A           88 ---LYIEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSE  155 (343)
T ss_dssp             ---CCCCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCT
T ss_pred             ---hhcCCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCcc
Confidence               2467999999999643211    1134567899999999999998743    23 4999999965432         


Q ss_pred             -------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 -------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 -------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                             +......|+.+|++.+.+++.++.+.   |++++.+.||.+
T Consensus       156 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v  200 (343)
T 2b69_A          156 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNT  200 (343)
T ss_dssp             TCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcce
Confidence                   22345679999999999999998774   899999999988

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.76  E-value=4.6e-18  Score=136.75  Aligned_cols=150  Identities=13%  Similarity=0.047  Sum_probs=110.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +++|||||+|+||+++++.|+++|++|++++|...         ...     +.    .+.....|.. . ..++   +.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~-----~~----~~~~~~~Dl~-~-~~~~---~~   59 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG---------NKA-----IN----DYEYRVSDYT-L-EDLI---NQ   59 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------------CCEEEECCCC-H-HHHH---HH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC---------ccc-----CC----ceEEEEcccc-H-HHHH---Hh
Confidence            68999999999999999999999999999998411         111     11    2222333333 2 2222   22


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------C
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------N  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  158 (223)
                      +.++|+|||+|+.....        +.+..+++|+.++.++++.+    ++.+..+||++||...+.+           .
T Consensus        60 ~~~~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~  127 (311)
T 3m2p_A           60 LNDVDAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELP  127 (311)
T ss_dssp             TTTCSEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCC
T ss_pred             hcCCCEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCC
Confidence            34899999999975533        34567889999999999987    4455578999999654322           1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .....|+.+|.+.+.+++.++.+   .|++++.+.|+.+
T Consensus       128 ~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v  163 (311)
T 3m2p_A          128 LPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHL  163 (311)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCce
Confidence            23578999999999999999886   5899999999988

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.76  E-value=2.1e-18  Score=146.78  Aligned_cols=167  Identities=14%  Similarity=0.098  Sum_probs=115.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHc---CCeEEEEccCCCCCCCCCChhhhhHHHHH-----------H----HHhCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAER---GASVVVNDLGGQRDGDGKSSKAADTVVAE-----------I----RSKGG   67 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~---G~~vv~~~r~~~~~~~~~~~~~~~~~~~~-----------~----~~~~~   67 (223)
                      ..++|+||||||+|+||++++++|+++   |++|++++|....      ....+.+.+.           +    .....
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~  143 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD------EDARRRLEKTFDSGDPELLRHFKELAADRLE  143 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH------HHHHHHHHGGGCSSCHHHHHHHHHHHTTTEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc------HHHHHHHHHHHHhcchhhhhhhhhhccCceE
Confidence            356899999999999999999999999   9999999984221      1111111111           1    11112


Q ss_pred             ccccccCCcc---chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC
Q psy16220         68 KAVPNYNSVV---DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG  144 (223)
Q Consensus        68 ~~~~~~~~~~---~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g  144 (223)
                      .+..|+.+..   +. ..++++.+   ++|+|||+||....        +.++..+++|+.++.++++.+    .+.+..
T Consensus       144 ~v~~Dl~~~~~gld~-~~~~~~~~---~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa----~~~~~~  207 (478)
T 4dqv_A          144 VVAGDKSEPDLGLDQ-PMWRRLAE---TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIA----LTTKLK  207 (478)
T ss_dssp             EEECCTTSGGGGCCH-HHHHHHHH---HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHH----TSSSCC
T ss_pred             EEEeECCCcccCCCH-HHHHHHHc---CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHH----HhCCCC
Confidence            2334555433   22 22333333   59999999997543        234567889999999999987    444556


Q ss_pred             cEEEEecCcccccCCC----------------------CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        145 RLVMTASNSGLLGNFG----------------------QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       145 ~iv~vsS~~~~~~~~~----------------------~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +||++||...+.....                      ...|+.+|++.+.+++.++.+.   |+++++|.||.|
T Consensus       208 ~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v  279 (478)
T 4dqv_A          208 PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMI  279 (478)
T ss_dssp             CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECcee
Confidence            9999999654322111                      1349999999999999998764   799999999999

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.75  E-value=6.1e-18  Score=133.38  Aligned_cols=144  Identities=15%  Similarity=0.147  Sum_probs=108.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|+||++++++|+ +|++|++++|+...          .        .+  +..|+.|.++++++++..    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~----------~--------~~--~~~Dl~~~~~~~~~~~~~----   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI----------Q--------GG--YKLDLTDFPRLEDFIIKK----   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC----------T--------TC--EECCTTSHHHHHHHHHHH----
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC----------C--------CC--ceeccCCHHHHHHHHHhc----
Confidence            69999999999999999999 49999999884311          0        11  567777777666666554    


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC----------C
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF----------G  160 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~----------~  160 (223)
                       ++|+||||||....    ..+.++++..+++|+.++..+++.+.+    .+ ++||++||...+.+.+          +
T Consensus        57 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~  126 (273)
T 2ggs_A           57 -RPDVIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNP  126 (273)
T ss_dssp             -CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred             -CCCEEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCC
Confidence             79999999996432    123467889999999999999999843    33 5999999987765443          2


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEe
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIV  193 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~  193 (223)
                      ...|+.+|++++.+++.    +.-..+|++.|.
T Consensus       127 ~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~  155 (273)
T 2ggs_A          127 INYYGLSKLLGETFALQ----DDSLIIRTSGIF  155 (273)
T ss_dssp             SSHHHHHHHHHHHHHCC----TTCEEEEECCCB
T ss_pred             CCHHHHHHHHHHHHHhC----CCeEEEeccccc
Confidence            57899999999999887    222345555444

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.73  E-value=2.8e-17  Score=144.90  Aligned_cols=162  Identities=11%  Similarity=0.059  Sum_probs=114.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++++|||||+|+||++++++|+++ |++|++++|+...         ...+..  ......+..|+.|..   ..+++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~---------~~~~~~--~~~v~~v~~Dl~d~~---~~~~~  378 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA---------ISRFLN--HPHFHFVEGDISIHS---EWIEY  378 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTT---------TGGGTT--CTTEEEEECCTTTCH---HHHHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchh---------hhhhcc--CCceEEEECCCCCcH---HHHHH
Confidence            46789999999999999999999998 8999999884321         111100  001112233554433   33333


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-------  158 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  158 (223)
                      +.+   ++|+|||+||.....    ...++++..+++|+.++.++++.+..    .+ +++|++||...+.+.       
T Consensus       379 ~~~---~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E  446 (660)
T 1z7e_A          379 HVK---KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDE  446 (660)
T ss_dssp             HHH---HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCT
T ss_pred             hhc---CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCC
Confidence            332   589999999964421    12345678999999999999998743    34 799999997654221       


Q ss_pred             -----------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -----------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -----------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                 .....|+.+|++.+.+++.++.+.   |+++++|.||.+
T Consensus       447 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v  493 (660)
T 1z7e_A          447 DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNW  493 (660)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSE
T ss_pred             CccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcc
Confidence                       122379999999999999998774   899999999998

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.73  E-value=5e-17  Score=130.41  Aligned_cols=155  Identities=13%  Similarity=0.045  Sum_probs=111.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++++++|||||+|+||++++++|+++|+      +.         ....        .....+..|+.|..++.++++
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~---------~~~~--------~~~~~~~~D~~d~~~~~~~~~   58 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LP---------GEDW--------VFVSSKDADLTDTAQTRALFE   58 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CT---------TCEE--------EECCTTTCCTTSHHHHHHHHH
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cc---------cccc--------cccCceecccCCHHHHHHHHh
Confidence            456789999999999999999999999997      10         0000        011223456666555554444


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-------  157 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-------  157 (223)
                      .     .++|+|||+|+....   ...+.++....+++|+.++.++++.+    ++.+..+||++||...+-.       
T Consensus        59 ~-----~~~d~Vih~A~~~~~---~~~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~  126 (319)
T 4b8w_A           59 K-----VQPTHVIHLAAMVGG---LFRNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPID  126 (319)
T ss_dssp             H-----SCCSEEEECCCCCCC---HHHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBC
T ss_pred             h-----cCCCEEEECceeccc---ccccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCcc
Confidence            3     269999999997431   11123446778999999999999987    4445569999999754321       


Q ss_pred             ---------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ---------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ---------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                               .|....|+.+|.+.+.+++.++.+.   |+++..+.|+.+
T Consensus       127 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v  172 (319)
T 4b8w_A          127 ETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNV  172 (319)
T ss_dssp             GGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             ccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccc
Confidence                     1222369999999999999998874   799999999998

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.73  E-value=3.1e-17  Score=131.01  Aligned_cols=142  Identities=14%  Similarity=0.120  Sum_probs=107.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|+||++++++|+ +|++|++++|+.                       ..+..|+.|..++.++++..    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-----------------------~~~~~D~~d~~~~~~~~~~~----   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-----------------------KEFCGDFSNPKGVAETVRKL----   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-----------------------SSSCCCTTCHHHHHHHHHHH----
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-----------------------ccccccCCCHHHHHHHHHhc----
Confidence            69999999999999999999 899999998731                       12445666655555544432    


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-----------
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-----------  159 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-----------  159 (223)
                       ++|+|||+||.....    .+.++++..+++|+.++.++++.+    ++.+ .++|++||...+.+.+           
T Consensus        54 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~  123 (299)
T 1n2s_A           54 -RPDVIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVFPGTGDIPWQETDATS  123 (299)
T ss_dssp             -CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCC
T ss_pred             -CCCEEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEEeCCCCCCCCCCCCCC
Confidence             699999999964321    122456788999999999999987    3333 4899999976543321           


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ....|+.+|.+.+.+++.++.       +++.+.||.+
T Consensus       124 p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v  154 (299)
T 1n2s_A          124 PLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWV  154 (299)
T ss_dssp             CSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSE
T ss_pred             CccHHHHHHHHHHHHHHHhCC-------CeEEEeeeee
Confidence            256899999999999988753       6899999998

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.72  E-value=2.2e-17  Score=131.18  Aligned_cols=140  Identities=19%  Similarity=0.203  Sum_probs=107.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +++|||||+|+||++++++|+++|++|++++|                           ...|+.|..++.++++..   
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r---------------------------~~~D~~d~~~~~~~~~~~---   55 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDK---------------------------KLLDITNISQVQQVVQEI---   55 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECT---------------------------TTSCTTCHHHHHHHHHHH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecc---------------------------cccCCCCHHHHHHHHHhc---
Confidence            38999999999999999999999999999976                           124555655555555443   


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  158 (223)
                        ++|+|||+|+.....    ...++++..+++|+.++.++++.+..    .+ .+||++||...+.+.           
T Consensus        56 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~  124 (287)
T 3sc6_A           56 --RPHIIIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNP  124 (287)
T ss_dssp             --CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCC
T ss_pred             --CCCEEEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCC
Confidence              799999999975421    12246788999999999999999743    33 489999997654322           


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+...|+.+|.+.+.+++.++.       ....+.|+.+
T Consensus       125 ~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v  156 (287)
T 3sc6_A          125 APINIYGASKYAGEQFVKELHN-------KYFIVRTSWL  156 (287)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSE
T ss_pred             CCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeee
Confidence            2357899999999999998765       3578889988

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.72  E-value=6.7e-17  Score=130.12  Aligned_cols=159  Identities=11%  Similarity=-0.001  Sum_probs=106.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +++++++|||||+|+||++++++|+++|++|++++|.......  .......               ..+...++-.   
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~---------------~~~~~~~~~~---   63 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMI--PPEGTGK---------------FLEKPVLELE---   63 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSS--CCTTSSE---------------EECSCGGGCC---
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccc--chhhhhh---------------hccCCCeeEE---
Confidence            3567899999999999999999999999999999985442100  0000000               0000000000   


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-------  158 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  158 (223)
                       ..+..++|+|||+|+........    ++....++ |+.++.++++.+    .+.+..+||++||...+...       
T Consensus        64 -~~Dl~~~d~vi~~a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~----~~~~v~~~v~~SS~~v~~~~~~~~~~E  133 (321)
T 3vps_A           64 -ERDLSDVRLVYHLASHKSVPRSF----KQPLDYLD-NVDSGRHLLALC----TSVGVPKVVVGSTCEVYGQADTLPTPE  133 (321)
T ss_dssp             -HHHHTTEEEEEECCCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             -eCccccCCEEEECCccCChHHHH----hCHHHHHH-HHHHHHHHHHHH----HHcCCCeEEEecCHHHhCCCCCCCCCC
Confidence             01111799999999975421111    11223455 999999999887    44445799999997654322       


Q ss_pred             ----CCCchhhhhHHHHHHHHHHHHhhhCCCCe-EEEEEeCCCc
Q psy16220        159 ----FGQANYSAAKMALVGLSNTLSIEGEKNNI-HCNVIVPTAA  197 (223)
Q Consensus       159 ----~~~~~y~~sK~a~~~~~~~l~~e~~~~~i-~v~~v~Pg~v  197 (223)
                          .....|+.+|.+.+.+++.++.+   .|+ +++.+.|+.+
T Consensus       134 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v  174 (321)
T 3vps_A          134 DSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNV  174 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccc
Confidence                23578999999999999999877   588 9999999988

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.68  E-value=2.5e-16  Score=124.99  Aligned_cols=144  Identities=15%  Similarity=0.089  Sum_probs=101.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      |++|||||+|+||++++++|+++  |++|++++|+.         .....+.   ......+..|+.|.+++..      
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~---------~~~~~l~---~~~~~~~~~D~~d~~~l~~------   62 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNV---------EKASTLA---DQGVEVRHGDYNQPESLQK------   62 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCT---------TTTHHHH---HTTCEEEECCTTCHHHHHH------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCH---------HHHhHHh---hcCCeEEEeccCCHHHHHH------
Confidence            46999999999999999999998  99999998832         2222111   1111223345555433332      


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                       .+..+|+|||+|+...       . +      ++|+.++.++++++    ++.+.++||++||.... +  ....|+.+
T Consensus        63 -~~~~~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~-~--~~~~y~~~  120 (287)
T 2jl1_A           63 -AFAGVSKLLFISGPHY-------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAE-E--SIIPLAHV  120 (287)
T ss_dssp             -HTTTCSEEEECCCCCS-------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGG-G--CCSTHHHH
T ss_pred             -HHhcCCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC-C--CCCchHHH
Confidence             2346899999998521       1 1      57888888888876    44555799999997664 2  33589999


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      |.+.+.+++.       .|++++.+.||.+ .+.
T Consensus       121 K~~~E~~~~~-------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          121 HLATEYAIRT-------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHHHHHHHHH-------TTCCEEEEEECCBHHHH
T ss_pred             HHHHHHHHHH-------cCCCeEEEECCEecccc
Confidence            9999998863       5899999999998 443

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.68  E-value=4.4e-17  Score=129.51  Aligned_cols=144  Identities=11%  Similarity=0.024  Sum_probs=104.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++++|||| +|+||+++++.|+++|++|++++|+...         .       ......+..|+.|..+++.+++    
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~-------~~~~~~~~~Dl~d~~~~~~~~~----   61 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP---------M-------PAGVQTLIADVTRPDTLASIVH----   61 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC---------C-------CTTCCEEECCTTCGGGCTTGGG----
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc---------c-------ccCCceEEccCCChHHHHHhhc----
Confidence            46899999 5999999999999999999999884322         1       1223344567777666555443    


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----------  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  158 (223)
                        +++|+|||+|+..         ..+.+..+++|+.++.++++.+    .+.+.++||++||...+-..          
T Consensus        62 --~~~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~  126 (286)
T 3gpi_A           62 --LRPEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTP  126 (286)
T ss_dssp             --GCCSEEEECHHHH---------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSC
T ss_pred             --CCCCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCC
Confidence              3699999999852         2445778899999999999987    44555799999997653321          


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .+...|+.+|.+.+.+ +..        ++++.+.|+.+
T Consensus       127 ~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v  157 (286)
T 3gpi_A          127 PIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGI  157 (286)
T ss_dssp             CCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEE
T ss_pred             CCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccc
Confidence             2357899999999988 432        78999999988

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.66  E-value=5.2e-16  Score=132.90  Aligned_cols=159  Identities=15%  Similarity=0.079  Sum_probs=112.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH------------hCCccccccCCc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS------------KGGKAVPNYNSV   76 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~   76 (223)
                      .+++|||||+|+||++++++|.++|++|++++|...      .......+.+.+..            ....+..|+.+.
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~------~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  223 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN------EEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  223 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSS------HHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBC
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCC------hHHHHHHHHHHHHHhcccccchhccCceEEEecCCccc
Confidence            479999999999999999999999999999988322      11122222222221            112233466665


Q ss_pred             cchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc--
Q psy16220         77 VDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG--  154 (223)
Q Consensus        77 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~--  154 (223)
                      .++.        ...++|+|||+|+....       ..+++..+++|+.++.++++.+..     +..++|++||...  
T Consensus       224 ~~l~--------~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~  283 (508)
T 4f6l_B          224 DDVV--------LPENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGT  283 (508)
T ss_dssp             SSCC--------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTS
T ss_pred             ccCC--------CccCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhcc
Confidence            5554        45689999999996531       235677889999999999998743     3479999999776  


Q ss_pred             cc----------------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        155 LL----------------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       155 ~~----------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..                +......|+.+|.+.+.+++.++.    .|++++.+.||.|
T Consensus       284 ~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v  338 (508)
T 4f6l_B          284 YFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNL  338 (508)
T ss_dssp             EECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCE
T ss_pred             CCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEeccee
Confidence            10                012467899999999999998753    5999999999999

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.65  E-value=1e-15  Score=125.38  Aligned_cols=146  Identities=16%  Similarity=0.118  Sum_probs=98.7

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccc-cCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPN-YNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~   83 (223)
                      ++++++|||||+|+||++++++|+++|++|++++|+..         ...  .+.+...  ...+..| +.|..++..+ 
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~---------~~~--~~~l~~~~~v~~v~~D~l~d~~~l~~~-   70 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK---------GLI--AEELQAIPNVTLFQGPLLNNVPLMDTL-   70 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC---------SHH--HHHHHTSTTEEEEESCCTTCHHHHHHH-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC---------hhh--HHHHhhcCCcEEEECCccCCHHHHHHH-
Confidence            34678999999999999999999999999999988322         110  1222221  1122335 4444333332 


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCc-ccccCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNS-GLLGNFGQ  161 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~-~~~~~~~~  161 (223)
                            +..+|++|||++....               +.|..+ .++++.    +++.+ .++||++||.. +.++.+..
T Consensus        71 ------~~~~d~Vi~~a~~~~~---------------~~~~~~-~~l~~a----a~~~g~v~~~V~~SS~~~~~~~~~~~  124 (352)
T 1xgk_A           71 ------FEGAHLAFINTTSQAG---------------DEIAIG-KDLADA----AKRAGTIQHYIYSSMPDHSLYGPWPA  124 (352)
T ss_dssp             ------HTTCSEEEECCCSTTS---------------CHHHHH-HHHHHH----HHHHSCCSEEEEEECCCGGGTSSCCC
T ss_pred             ------HhcCCEEEEcCCCCCc---------------HHHHHH-HHHHHH----HHHcCCccEEEEeCCccccccCCCCC
Confidence                  2358999999875320               124433 444444    45555 67999999986 45555566


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..|+.+|++++.+++.+       |+++++|.||.+
T Consensus       125 ~~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~  153 (352)
T 1xgk_A          125 VPMWAPKFTVENYVRQL-------GLPSTFVYAGIY  153 (352)
T ss_dssp             CTTTHHHHHHHHHHHTS-------SSCEEEEEECEE
T ss_pred             ccHHHHHHHHHHHHHHc-------CCCEEEEeccee
Confidence            78999999999988752       899999999987

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.63  E-value=2.6e-15  Score=119.93  Aligned_cols=151  Identities=13%  Similarity=0.043  Sum_probs=98.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   86 (223)
                      +|++|||||+|+||++++++|+++| ++|++++|+..         ...  .+.+...+. .+..|+.|.+++..+    
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~---------~~~--~~~l~~~~~~~~~~D~~d~~~l~~~----   69 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR---------KKA--AKELRLQGAEVVQGDQDDQVIMELA----   69 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT---------SHH--HHHHHHTTCEEEECCTTCHHHHHHH----
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC---------CHH--HHHHHHCCCEEEEecCCCHHHHHHH----
Confidence            4789999999999999999999999 99999988322         111  122222222 234455554433332    


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC---CCCch
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN---FGQAN  163 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~---~~~~~  163 (223)
                         +..+|+|||+++.....            ..+.|+.+...+++.    +++.+.++||++|+.. ..+.   .....
T Consensus        70 ---~~~~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~a----a~~~gv~~iv~~S~~~-~~~~~~~~~~~~  129 (299)
T 2wm3_A           70 ---LNGAYATFIVTNYWESC------------SQEQEVKQGKLLADL----ARRLGLHYVVYSGLEN-IKKLTAGRLAAA  129 (299)
T ss_dssp             ---HTTCSEEEECCCHHHHT------------CHHHHHHHHHHHHHH----HHHHTCSEEEECCCCC-HHHHTTTSCCCH
T ss_pred             ---HhcCCEEEEeCCCCccc------------cchHHHHHHHHHHHH----HHHcCCCEEEEEcCcc-ccccCCCcccCc
Confidence               23599999999842210            123344444444444    4666667999966643 3322   22467


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      |..+|.+++.+.+.       .|++++.|.||.+ ++..
T Consensus       130 y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~  161 (299)
T 2wm3_A          130 HFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLL  161 (299)
T ss_dssp             HHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGG
T ss_pred             hhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhch
Confidence            99999999988864       3799999999998 5543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.62  E-value=1.8e-15  Score=119.98  Aligned_cols=138  Identities=11%  Similarity=0.016  Sum_probs=93.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++|||||+|+||++++++|+++  |++|++++|+.         .....+.   ......+..|+.|.+++.+       
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~---------~~~~~~~---~~~~~~~~~D~~d~~~~~~-------   61 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNP---------AKAQALA---AQGITVRQADYGDEAALTS-------   61 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCT---------TTCHHHH---HTTCEEEECCTTCHHHHHH-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcCh---------Hhhhhhh---cCCCeEEEcCCCCHHHHHH-------
Confidence            3899999999999999999998  99999998832         2222111   1111223345555433332       


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhH
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                      .+..+|+|||+|+...                ..|+.++.++++.+    ++.+.++||++||....   +....|+.+|
T Consensus        62 ~~~~~d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~---~~~~~y~~sK  118 (286)
T 2zcu_A           62 ALQGVEKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD---TSPLGLADEH  118 (286)
T ss_dssp             HTTTCSEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT---TCCSTTHHHH
T ss_pred             HHhCCCEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC---CCcchhHHHH
Confidence            2346899999998421                13566666666665    55555799999998765   2335899999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+.+.+++.       .|++++.|.||.+
T Consensus       119 ~~~e~~~~~-------~~~~~~ilrp~~~  140 (286)
T 2zcu_A          119 IETEKMLAD-------SGIVYTLLRNGWY  140 (286)
T ss_dssp             HHHHHHHHH-------HCSEEEEEEECCB
T ss_pred             HHHHHHHHH-------cCCCeEEEeChHH
Confidence            999998864       4899999999988

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.62  E-value=9.6e-16  Score=126.09  Aligned_cols=130  Identities=12%  Similarity=0.068  Sum_probs=102.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||++++++|+++|+ +|+.++|         +                      .|.++.+++++     
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~---------~----------------------~d~~~l~~~~~-----   45 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR---------Q----------------------TKEEELESALL-----   45 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT---------T----------------------CCHHHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC---------C----------------------CCHHHHHHHhc-----
Confidence            699999999999999999999999 9999876         1                      22222223222     


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-cEEEEecCcccccCCCCchhhhhH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYSAAK  168 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~~y~~sK  168 (223)
                        ++|+|||+|+.....        ++...+++|+.++.++++.+    ++.+.. ++|++||.....    ...|+.+|
T Consensus        46 --~~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK  107 (369)
T 3st7_A           46 --KADFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESK  107 (369)
T ss_dssp             --HCSEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHH
T ss_pred             --cCCEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHH
Confidence              499999999965432        33456788999999999887    444434 899999976653    67899999


Q ss_pred             HHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        169 MALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       169 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+.+.+++.++.+.   |+++..+.|+.+
T Consensus       108 ~~~E~~~~~~~~~~---g~~~~i~R~~~v  133 (369)
T 3st7_A          108 LQGEQLLREYAEEY---GNTVYIYRWPNL  133 (369)
T ss_dssp             HHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             HHHHHHHHHHHHHh---CCCEEEEECCce
Confidence            99999999998874   688999999988

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.61  E-value=1.1e-14  Score=118.80  Aligned_cols=150  Identities=17%  Similarity=0.140  Sum_probs=101.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   85 (223)
                      ++.+++|||||+|+||+++++.|+++|++|++++|+...     +..+.. ..+.+...+. .+..|+.|.+++.+++++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPR-----SPSKAK-IFKALEDKGAIIVYGLINEQEAMEKILKE   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCC-----CHHHHH-HHHHHHHTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCC-----ChhHHH-HHHHHHhCCcEEEEeecCCHHHHHHHHhh
Confidence            556799999999999999999999999999999984321     222222 2333433332 234466665544444432


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccc----cCCC
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLL----GNFG  160 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~----~~~~  160 (223)
                           .++|+|||+++.                   .|+.+..++++++    ++.+ ..++|+ |+.....    +.+.
T Consensus        82 -----~~~d~Vi~~a~~-------------------~n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p  132 (346)
T 3i6i_A           82 -----HEIDIVVSTVGG-------------------ESILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEP  132 (346)
T ss_dssp             -----TTCCEEEECCCG-------------------GGGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTT
T ss_pred             -----CCCCEEEECCch-------------------hhHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCC
Confidence                 279999999985                   2788888888876    4444 457775 4433221    2245


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                      ...|+.+|.+++.+.+.       .|+.+..|.||.+.
T Consensus       133 ~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~  163 (346)
T 3i6i_A          133 GLNMYREKRRVRQLVEE-------SGIPFTYICCNSIA  163 (346)
T ss_dssp             HHHHHHHHHHHHHHHHH-------TTCCBEEEECCEES
T ss_pred             cchHHHHHHHHHHHHHH-------cCCCEEEEEecccc
Confidence            57899999999888765       47899999999883

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.59  E-value=2.8e-14  Score=122.45  Aligned_cols=150  Identities=11%  Similarity=0.066  Sum_probs=106.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++++|||||+|+||+++++.|+++|++|++++|+....                    ..+..|..+..         .+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------------~~v~~d~~~~~---------~~  197 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------------GKRFWDPLNPA---------SD  197 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------------TCEECCTTSCC---------TT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------------cceeecccchh---------HH
Confidence            57999999999999999999999999999999843321                    01333433221         23


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-c----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-G----------  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~----------  157 (223)
                      .+.++|+|||+|+.....   ..+.+..+.++++|+.++.++++.+.   +..+.++||++||...+- .          
T Consensus       198 ~l~~~D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~  271 (516)
T 3oh8_A          198 LLDGADVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEES  271 (516)
T ss_dssp             TTTTCSEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTS
T ss_pred             hcCCCCEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCC
Confidence            345899999999975432   45567788899999999999999742   344457999999965432 0          


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..+...|+.+|...+.+.+.    ....|++++.|.||.+
T Consensus       272 ~~~~~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v  307 (516)
T 3oh8_A          272 ESGDDFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVA  307 (516)
T ss_dssp             CCCSSHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEE
T ss_pred             CCCcChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEE
Confidence            11345677778776665443    2346899999999998

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.59  E-value=2.8e-14  Score=114.26  Aligned_cols=150  Identities=13%  Similarity=0.104  Sum_probs=93.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCCh-hhhhHHHHHHHHhCC-ccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSS-KAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++++|||||+|+||++++++|+++|++|++++|+...   .... .+.+. .+++...+. .+..|+.|.+++.+++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~~~~~-~~~l~~~~v~~v~~D~~d~~~l~~~~---   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTIT---AANPETKEEL-IDNYQSLGVILLEGDINDHETLVKAI---   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCC---SSCHHHHHHH-HHHHHHTTCEEEECCTTCHHHHHHHH---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcc---cCChHHHHHH-HHHHHhCCCEEEEeCCCCHHHHHHHH---
Confidence            4689999999999999999999999999999884310   0011 22222 233333332 2334555544333322   


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccc-----ccCCC
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGL-----LGNFG  160 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~-----~~~~~  160 (223)
                          ..+|+|||+++...                   +.+...+++++    ++.+ .++||+ |+....     .+.|.
T Consensus        75 ----~~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~  126 (307)
T 2gas_A           75 ----KQVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGNVKKFFP-SEFGLDVDRHDAVEPV  126 (307)
T ss_dssp             ----TTCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTH
T ss_pred             ----hCCCEEEECCcccc-------------------cccHHHHHHHH----HhcCCceEEee-cccccCcccccCCCcc
Confidence                36999999998532                   23444555544    5554 568873 332211     11233


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ...| .+|.+++.+.+.       .|++++.|.||++ +...
T Consensus       127 ~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~  160 (307)
T 2gas_A          127 RQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFL  160 (307)
T ss_dssp             HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTG
T ss_pred             hhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeecccc
Confidence            5678 999999887763       3788999999998 5433

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.57  E-value=3.9e-14  Score=112.29  Aligned_cols=137  Identities=8%  Similarity=-0.014  Sum_probs=93.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      +++||||+ |+||++++++|+++|++|++++|         +......+..   .....+..|+.|.   +         
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~---~~~~~~~~D~~d~---~---------   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSR---------NPDQMEAIRA---SGAEPLLWPGEEP---S---------   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEES---------CGGGHHHHHH---TTEEEEESSSSCC---C---------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEc---------ChhhhhhHhh---CCCeEEEeccccc---c---------
Confidence            68999998 99999999999999999999988         3333322211   1112233455442   1         


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh--cCCCcEEEEecCcccccC---------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK--QNYGRLVMTASNSGLLGN---------  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~iv~vsS~~~~~~~---------  158 (223)
                      +.++|+|||+|+.....       +..              .+.++..+++  .+..++|++||...+-..         
T Consensus        61 ~~~~d~vi~~a~~~~~~-------~~~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~  119 (286)
T 3ius_A           61 LDGVTHLLISTAPDSGG-------DPV--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETT  119 (286)
T ss_dssp             CTTCCEEEECCCCBTTB-------CHH--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTS
T ss_pred             cCCCCEEEECCCccccc-------cHH--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCC
Confidence            56899999999965432       111              1233333444  445799999997543221         


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        159 --FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       159 --~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                        .+...|+.+|.+.+.+++.+      .|++++++.|+.+.
T Consensus       120 ~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~  155 (286)
T 3ius_A          120 PLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIY  155 (286)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceE
Confidence              23457999999999998877      58999999999983

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.54  E-value=7.4e-14  Score=112.05  Aligned_cols=152  Identities=10%  Similarity=0.045  Sum_probs=96.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+++|||||+|+||++++++|+++|++|++++|+....    +....+. .+.+...+. .+..|+.|.+++.++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~-~~~~~~~~~~~~~~D~~d~~~l~~~-----   73 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVS----NIDKVQM-LLYFKQLGAKLIEASLDDHQRLVDA-----   73 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSS----CHHHHHH-HHHHHTTTCEEECCCSSCHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCccc----chhHHHH-HHHHHhCCeEEEeCCCCCHHHHHHH-----
Confidence            35799999999999999999999999999998843210    1222221 223332222 233455544333332     


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc------CCC
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG------NFG  160 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~------~~~  160 (223)
                        +..+|+|||+++.....               .|+.+...+++++    ++.+ .++||+ |+......      .|.
T Consensus        74 --~~~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~  131 (313)
T 1qyd_A           74 --LKQVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPG  131 (313)
T ss_dssp             --HTTCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSST
T ss_pred             --HhCCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCC
Confidence              23699999999965421               2566666666665    5554 578875 44321111      234


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRL  200 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~  200 (223)
                      ...| .+|.+++.+.+.       .|+.++.|.||.+ ...
T Consensus       132 ~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~  164 (313)
T 1qyd_A          132 SITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYF  164 (313)
T ss_dssp             THHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHH
T ss_pred             cchH-HHHHHHHHHHHh-------cCCCeEEEEeceecccc
Confidence            5678 999999887752       4788999999998 443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.50  E-value=7.7e-14  Score=110.80  Aligned_cols=143  Identities=11%  Similarity=0.014  Sum_probs=88.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|+||+++++.|++. |++|++++|+..         ....+.   ......+..|+.|.+++.+       .
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~---------~~~~~~---~~~v~~~~~D~~d~~~l~~-------~   62 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVE---------KVPDDW---RGKVSVRQLDYFNQESMVE-------A   62 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGG---------GSCGGG---BTTBEEEECCTTCHHHHHH-------H
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHH---------HHHHhh---hCCCEEEEcCCCCHHHHHH-------H
Confidence            5999999999999999999988 999999988432         221110   0111123345554433332       3


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                      +..+|+|||+|+.....              ..|+.++..+++.    +++.+.++||++||......    ..|..++.
T Consensus        63 ~~~~d~vi~~a~~~~~~--------------~~~~~~~~~l~~a----a~~~gv~~iv~~Ss~~~~~~----~~~~~~~~  120 (289)
T 3e48_A           63 FKGMDTVVFIPSIIHPS--------------FKRIPEVENLVYA----AKQSGVAHIIFIGYYADQHN----NPFHMSPY  120 (289)
T ss_dssp             TTTCSEEEECCCCCCSH--------------HHHHHHHHHHHHH----HHHTTCCEEEEEEESCCSTT----CCSTTHHH
T ss_pred             HhCCCEEEEeCCCCccc--------------hhhHHHHHHHHHH----HHHcCCCEEEEEcccCCCCC----CCCccchh
Confidence            34799999999864321              1245555455444    46666679999999654332    23333332


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc-cc
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA-SR  199 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~  199 (223)
                      ..     .+...+...|++++.|.||.+ ++
T Consensus       121 ~~-----~~e~~~~~~g~~~~ilrp~~~~~~  146 (289)
T 3e48_A          121 FG-----YASRLLSTSGIDYTYVRMAMYMDP  146 (289)
T ss_dssp             HH-----HHHHHHHHHCCEEEEEEECEESTT
T ss_pred             HH-----HHHHHHHHcCCCEEEEeccccccc
Confidence            21     122223346899999999998 43

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.48  E-value=3e-13  Score=110.70  Aligned_cols=154  Identities=14%  Similarity=0.003  Sum_probs=100.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC-----CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG-----ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G-----~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +|++|||||+|+||++++++|+++|     ++|++++|......       ..      ......+..|+.|.+++.+  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~------~~~~~~~~~Dl~d~~~~~~--   65 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HE------DNPINYVQCDISDPDDSQA--   65 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CC------SSCCEEEECCTTSHHHHHH--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cc------cCceEEEEeecCCHHHHHH--
Confidence            4789999999999999999999999     99999998543211       00      0011123345555433333  


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEE-------EEecCcccc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLV-------MTASNSGLL  156 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv-------~vsS~~~~~  156 (223)
                        +.+...++|+|||+|+...         ++.+..+++|+.++.++++.+.+...  +..++|       ++||...+-
T Consensus        66 --~~~~~~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg  132 (364)
T 2v6g_A           66 --KLSPLTDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYG  132 (364)
T ss_dssp             --HHTTCTTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTT
T ss_pred             --HHhcCCCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhcc
Confidence              3333335999999999642         24678899999999999999844311  335776       678764321


Q ss_pred             cC--------------CCCchhhhhHHHHHHHHHHHHhhhCCCC-eEEEEEeCCCc
Q psy16220        157 GN--------------FGQANYSAAKMALVGLSNTLSIEGEKNN-IHCNVIVPTAA  197 (223)
Q Consensus       157 ~~--------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~-i~v~~v~Pg~v  197 (223)
                      ..              +....|    .+.+.+++.++.+   .+ +++..+.|+.+
T Consensus       133 ~~~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~---~~~~~~~ilRp~~v  181 (364)
T 2v6g_A          133 KIESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVEK---KEGLTWSVHRPGNI  181 (364)
T ss_dssp             TSCCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHTT---STTCEEEEEEESSE
T ss_pred             ccccCCCCCCccccCCccchhh----HHHHHHHHHHhhc---CCCceEEEECCCce
Confidence            11              113345    2345555554432   45 99999999998

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.47  E-value=1.5e-13  Score=110.79  Aligned_cols=145  Identities=12%  Similarity=0.054  Sum_probs=89.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .+++|||||+|+||++++++|+++|++|++++|+...   ....... ...+.+...+. .+..|+.|.+++..+     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~~-~~l~~~~~~~v~~v~~D~~d~~~l~~a-----   74 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTP---DSTPSSV-QLREEFRSMGVTIIEGEMEEHEKMVSV-----   74 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCT---TCCHHHH-HHHHHHHHTTCEEEECCTTCHHHHHHH-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCccc---ccChHHH-HHHHHhhcCCcEEEEecCCCHHHHHHH-----
Confidence            3579999999999999999999999999999884310   0011122 22223333322 233455554333332     


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccc------cCCC
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLL------GNFG  160 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~------~~~~  160 (223)
                        +..+|+|||+++...                   +.+...+++++    .+.+ .++||.  |..+..      +.+.
T Consensus        75 --~~~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~  127 (321)
T 3c1o_A           75 --LKQVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNIKRFLP--SDFGCEEDRIKPLPPF  127 (321)
T ss_dssp             --HTTCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCCEEEC--SCCSSCGGGCCCCHHH
T ss_pred             --HcCCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCccEEec--cccccCccccccCCCc
Confidence              235999999998532                   33344444443    5554 568873  333311      1122


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ...| .+|++++.+++.       .++.++.|.||.+
T Consensus       128 ~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~  156 (321)
T 3c1o_A          128 ESVL-EKKRIIRRAIEA-------AALPYTYVSANCF  156 (321)
T ss_dssp             HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEE
T ss_pred             chHH-HHHHHHHHHHHH-------cCCCeEEEEecee
Confidence            4578 999999988863       3678888999988

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.46  E-value=2.1e-13  Score=109.80  Aligned_cols=140  Identities=14%  Similarity=0.110  Sum_probs=88.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++|||||+|+||++++++|+++|++|++++|+..         ......+++...+. .+..|+.|.+++.+++     
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~---------~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~-----   77 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS---------SKTTLLDEFQSLGAIIVKGELDEHEKLVELM-----   77 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC---------SCHHHHHHHHHTTCEEEECCTTCHHHHHHHH-----
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC---------chhhHHHHhhcCCCEEEEecCCCHHHHHHHH-----
Confidence            57999999999999999999999999999988422         11111223333332 2334555544333322     


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc-----CCCCc
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG-----NFGQA  162 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~-----~~~~~  162 (223)
                        ..+|+|||+++...                   +.+..+++++    +++.+ .++||+ |+......     .|...
T Consensus        78 --~~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~  131 (318)
T 2r6j_A           78 --KKVDVVISALAFPQ-------------------ILDQFKILEA----IKVAGNIKRFLP-SDFGVEEDRINALPPFEA  131 (318)
T ss_dssp             --TTCSEEEECCCGGG-------------------STTHHHHHHH----HHHHCCCCEEEC-SCCSSCTTTCCCCHHHHH
T ss_pred             --cCCCEEEECCchhh-------------------hHHHHHHHHH----HHhcCCCCEEEe-eccccCcccccCCCCcch
Confidence              35999999998531                   2333444444    35554 568874 44321111     11235


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .| .+|.+++.+.+.       .|+.+..|.||.+
T Consensus       132 ~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~  158 (318)
T 2r6j_A          132 LI-ERKRMIRRAIEE-------ANIPYTYVSANCF  158 (318)
T ss_dssp             HH-HHHHHHHHHHHH-------TTCCBEEEECCEE
T ss_pred             hH-HHHHHHHHHHHh-------cCCCeEEEEccee
Confidence            68 999999888763       4788889999987

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.45  E-value=5.9e-13  Score=106.51  Aligned_cols=146  Identities=14%  Similarity=0.179  Sum_probs=90.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .++++||||+|+||+++++.|+++|++|++++|+....   ++.... ...+.+...+. .+..|+.|.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---~~~~~~-~~~~~l~~~~v~~v~~D~~d~~~l~~~~~---   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTAS---SNSEKA-QLLESFKASGANIVHGSIDDHASLVEAVK---   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTT---TTHHHH-HHHHHHHTTTCEEECCCTTCHHHHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccc---cCHHHH-HHHHHHHhCCCEEEEeccCCHHHHHHHHc---
Confidence            35799999999999999999999999999998843210   011222 12233333322 23345555443333322   


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc-----CCCC
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG-----NFGQ  161 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~-----~~~~  161 (223)
                          .+|+|||+++...                   +.+...+++++    ++.+ .++||+ |+......     .|..
T Consensus        77 ----~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~  128 (308)
T 1qyc_A           77 ----NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFP-SEFGNDVDNVHAVEPAK  128 (308)
T ss_dssp             ----TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHH
T ss_pred             ----CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCCCceEee-cccccCccccccCCcch
Confidence                5999999998532                   23334444444    5554 568874 44322111     1224


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..| .+|.+++.+.+.       .|+.++.+.||.+
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~  156 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEA-------EGIPYTYVSSNCF  156 (308)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEE
T ss_pred             hHH-HHHHHHHHHHHh-------cCCCeEEEEecee
Confidence            568 999999888764       3678889999988

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.40  E-value=1.5e-11  Score=98.09  Aligned_cols=146  Identities=15%  Similarity=0.066  Sum_probs=97.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      +||||||+|.||++++++|+++|++|+++.|++...                     .+..+        .   ...+.+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------------~~~~~--------~---~~~~~l   49 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------------RITWD--------E---LAASGL   49 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------------EEEHH--------H---HHHHCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------------eeecc--------h---hhHhhc
Confidence            699999999999999999999999999998842210                     00000        0   012335


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCcccccC----------
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGN----------  158 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~----------  158 (223)
                      ..+|.+||.|+.....+....+....+..+++|+.++..+.+.+    ...+  ...+|+.||...+.+.          
T Consensus        50 ~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~----~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p  125 (298)
T 4b4o_A           50 PSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAI----TKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSP  125 (298)
T ss_dssp             CSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHH----HHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCC
T ss_pred             cCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHH----HHhCCCceEEEEEeeeeeecCCCCCcccccCC
Confidence            68999999998654455556778888889999999998888775    3332  2346666765443221          


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .....|+..|..-+.     .......++++..+.||.|
T Consensus       126 ~~~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v  160 (298)
T 4b4o_A          126 GGDFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVV  160 (298)
T ss_dssp             CSCSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEE
T ss_pred             ccccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeE
Confidence             122334444333322     2234567999999999988

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.27  E-value=8.7e-13  Score=104.94  Aligned_cols=108  Identities=17%  Similarity=0.161  Sum_probs=73.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-C-CccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-G-GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~   82 (223)
                      .++++|++|||||+||||+++++.|+++|++|++++|         +..+.+++.+++... . .....|+.+.++++..
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R---------~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~  185 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR---------KLDKAQAAADSVNKRFKVNVTAAETADDASRAEA  185 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHH
Confidence            3468999999999999999999999999999999987         666666666666542 1 2233455554433322


Q ss_pred             HHHHHHhcCCccEEEeccCCCC-CCCCCCCCH-HHHHHHHHhhhhHHH
Q psy16220         83 VQTALENFGRIDIVINNAGILR-DKSFARISD-TDWQLVQDVHLTGAF  128 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~-~~~~~~~~~n~~~~~  128 (223)
                             ...+|+||||+|... ..+..+.+. ++|+..+++|+.+++
T Consensus       186 -------~~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          186 -------VKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -------TTTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             -------HHhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence                   235899999998542 222222332 445557777777665

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.24  E-value=2.4e-11  Score=92.44  Aligned_cols=152  Identities=13%  Similarity=0.036  Sum_probs=91.8

Q ss_pred             ccCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          6 RFDGRVAIVTGA----------------GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         6 ~~~~~~~lItGa----------------~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      +++||++|||||                +||||+++|+.|+++|++|++++++...          +.      ..    
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l----------~~------~~----   64 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PT------PP----   64 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CC------CT----
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc----------cc------CC----
Confidence            478999999999                6899999999999999999998774210          00      00    


Q ss_pred             ccccCCccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHH--HHhhhhHHHHHHHHHHHHHHhc-CCCcE
Q psy16220         70 VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLV--QDVHLTGAFRVSRAAWPHMKKQ-NYGRL  146 (223)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~~~~-~~g~i  146 (223)
                      ..+..|..+.+..++.+.+.++++|++|+|||+....+. +.+.+.+.+.  -+.++.-.+....-+++.+.+. ..+.+
T Consensus        65 g~~~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~  143 (226)
T 1u7z_A           65 FVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY  143 (226)
T ss_dssp             TEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE
T ss_pred             CCeEEccCcHHHHHHHHHHhcCCCCEEEECCcccCCCCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE
Confidence            123556666778888888899999999999998654433 2222223220  0222222232233344444543 22332


Q ss_pred             -EEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCC
Q psy16220        147 -VMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTA  196 (223)
Q Consensus       147 -v~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~  196 (223)
                       |-+.-   ..               +.+.+..+.++.++|+.+.+.+|--
T Consensus       144 ~VGFaa---Et---------------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          144 VVGFAA---ET---------------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             EEEEEE---ES---------------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             EEEcch---hh---------------chHHHHHHHHHHhcCCCEEEEeecc
Confidence             21211   11               2355666666666777777766654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.21  E-value=5.4e-11  Score=96.28  Aligned_cols=163  Identities=13%  Similarity=0.069  Sum_probs=104.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      ++++||||+|.||.+++..|+++|+       .|+++++..       .....+....++......+..|+.+..+..  
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~-------~~~~~~g~~~dl~~~~~~~~~di~~~~~~~--   75 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ-------AMKALEGVVMELEDCAFPLLAGLEATDDPK--   75 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG-------GHHHHHHHHHHHHTTTCTTEEEEEEESCHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC-------chhhccchhhhhhcccccccCCeEeccChH--
Confidence            4799999999999999999999986       799987610       011222222233321111222333322222  


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc--------
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG--------  154 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~--------  154 (223)
                           +.+...|++||.||.... +  .   ++..+.++.|+.++..+++.+..+-  ....+++++|+...        
T Consensus        76 -----~a~~~~D~Vih~Ag~~~~-~--~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~  142 (327)
T 1y7t_A           76 -----VAFKDADYALLVGAAPRK-A--G---MERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYK  142 (327)
T ss_dssp             -----HHTTTCSEEEECCCCCCC-T--T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred             -----HHhCCCCEEEECCCcCCC-C--C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHH
Confidence                 223469999999996532 1  1   2345689999999999999874431  12357888887542        


Q ss_pred             cc-cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        155 LL-GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       155 ~~-~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .. +.+....|+.+|...+.+.+.++..+   |+.+..|.|..|
T Consensus       143 ~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V  183 (327)
T 1y7t_A          143 NAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTV  183 (327)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEE
T ss_pred             HcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEE
Confidence            11 24455679999999999998888764   455556666554

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.14  E-value=1.1e-10  Score=88.93  Aligned_cols=84  Identities=11%  Similarity=0.127  Sum_probs=65.4

Q ss_pred             CCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc
Q psy16220          8 DGRVAIVTGA----------------GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP   71 (223)
Q Consensus         8 ~~~~~lItGa----------------~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (223)
                      +||++|||||                +|++|.++|+.++++|++|++++|+......      .            ....
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------~------------~~~~   63 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------P------------HPNL   63 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------C------------CTTE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------C------------CCCe
Confidence            5899999999                7889999999999999999999885321100      0            0124


Q ss_pred             ccCCccchHHHHHHHHHhcCCccEEEeccCCCCCCCCC
Q psy16220         72 NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFA  109 (223)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~  109 (223)
                      +..+..+.+..++.+.+.++++|++|+|||.....+..
T Consensus        64 ~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~  101 (232)
T 2gk4_A           64 SIREITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPVY  101 (232)
T ss_dssp             EEEECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEEEE
T ss_pred             EEEEHhHHHHHHHHHHHhcCCCCEEEEcCccccccchh
Confidence            66677788888999999999999999999987655444

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.80  E-value=8.5e-09  Score=77.14  Aligned_cols=101  Identities=18%  Similarity=0.188  Sum_probs=65.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||++|||+++++.+...|++|+++++         +.+..+.    +.+.+.....|..+.+.    .+.+.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---------~~~~~~~----~~~~g~~~~~d~~~~~~----~~~~~  100 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---------SDAKREM----LSRLGVEYVGDSRSVDF----ADEIL  100 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---------SHHHHHH----HHTTCCSEEEETTCSTH----HHHHH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---------CHHHHHH----HHHcCCCEEeeCCcHHH----HHHHH
Confidence            5789999999999999999999999999999876         4443332    22233333344444322    22333


Q ss_pred             Hhc--CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         88 ENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        88 ~~~--~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      +..  +++|++|+|+|.           +.               .+..++.++..  |++|++++..
T Consensus       101 ~~~~~~~~D~vi~~~g~-----------~~---------------~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A          101 ELTDGYGVDVVLNSLAG-----------EA---------------IQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             HHTTTCCEEEEEECCCT-----------HH---------------HHHHHHTEEEE--EEEEECSCGG
T ss_pred             HHhCCCCCeEEEECCch-----------HH---------------HHHHHHHhccC--CEEEEEcCCC
Confidence            322  369999999972           11               23344555554  8999998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.80  E-value=5.6e-12  Score=105.72  Aligned_cols=36  Identities=39%  Similarity=0.705  Sum_probs=33.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.+.||+++|||++ +||+++|+.|++.|++|+++++
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~  296 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEI  296 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcC
Confidence            45789999999998 9999999999999999999976

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.68  E-value=5.7e-08  Score=78.56  Aligned_cols=79  Identities=22%  Similarity=0.271  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|+++|||+++++.+...|++|+++++         +.++.+.. +   +.+....+|..+..+..+.+.++.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---------~~~~~~~~-~---~~g~~~~~d~~~~~~~~~~~~~~~  211 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---------SDEKIAYL-K---QIGFDAAFNYKTVNSLEEALKKAS  211 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHH-H---HTTCSEEEETTSCSCHHHHHHHHC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH-H---hcCCcEEEecCCHHHHHHHHHHHh
Confidence            4789999999999999999999999999999876         55444433 2   234444456655455555554443


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .  +++|++|+|+|
T Consensus       212 ~--~~~d~vi~~~g  223 (333)
T 1v3u_A          212 P--DGYDCYFDNVG  223 (333)
T ss_dssp             T--TCEEEEEESSC
T ss_pred             C--CCCeEEEECCC
Confidence            2  58999999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.68  E-value=5.5e-08  Score=79.15  Aligned_cols=104  Identities=21%  Similarity=0.199  Sum_probs=71.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|++++||+++++.+...|++|+++++         +..+.+.    +++.+.....|..+..+..+.+.++.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~---------~~~~~~~----~~~~g~~~~~d~~~~~~~~~~~~~~~  235 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG---------GEGKEEL----FRSIGGEVFIDFTKEKDIVGAVLKAT  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC---------STTHHHH----HHHTTCCEEEETTTCSCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcC---------CHHHHHH----HHHcCCceEEecCccHhHHHHHHHHh
Confidence            4789999999999999999999999999999876         4333322    22234444456665556666555554


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      ..  ++|++|+++|..          +               ..+.+++.++..  |+++.+++..
T Consensus       236 ~~--~~D~vi~~~g~~----------~---------------~~~~~~~~l~~~--G~iv~~g~~~  272 (347)
T 2hcy_A          236 DG--GAHGVINVSVSE----------A---------------AIEASTRYVRAN--GTTVLVGMPA  272 (347)
T ss_dssp             TS--CEEEEEECSSCH----------H---------------HHHHHTTSEEEE--EEEEECCCCT
T ss_pred             CC--CCCEEEECCCcH----------H---------------HHHHHHHHHhcC--CEEEEEeCCC
Confidence            33  799999999831          0               234444455444  8999998754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.61  E-value=8.4e-08  Score=65.24  Aligned_cols=73  Identities=25%  Similarity=0.202  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   85 (223)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|         +..+.+...    ..+. ....|..+..   .    
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r---------~~~~~~~~~----~~~~~~~~~d~~~~~---~----   62 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADH---------DLAALAVLN----RMGVATKQVDAKDEA---G----   62 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEES---------CHHHHHHHH----TTTCEEEECCTTCHH---H----
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeC---------CHHHHHHHH----hCCCcEEEecCCCHH---H----
Confidence            3578999999 999999999999999 89999987         554443322    2221 2233443332   2    


Q ss_pred             HHHhcCCccEEEeccC
Q psy16220         86 ALENFGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~~~~id~li~~ag  101 (223)
                      +.+.+..+|++|++++
T Consensus        63 ~~~~~~~~d~vi~~~~   78 (118)
T 3ic5_A           63 LAKALGGFDAVISAAP   78 (118)
T ss_dssp             HHHHTTTCSEEEECSC
T ss_pred             HHHHHcCCCEEEECCC
Confidence            2222357999999996

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.59  E-value=6.1e-08  Score=76.85  Aligned_cols=79  Identities=23%  Similarity=0.370  Sum_probs=57.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      .++++|+++|||++ |+|+++|+.|++.| +|++++|         +.++.+++.+++...+.   .+..+..+.     
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r---------~~~~~~~l~~~~~~~~~~~~~~~~d~~~~-----  187 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANR---------TVEKAEALAKEIAEKLNKKFGEEVKFSGL-----  187 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECS---------SHHHHHHHHHHHHHHHTCCHHHHEEEECT-----
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEEC---------CHHHHHHHHHHHhhhcccccceeEEEeeH-----
Confidence            35789999999997 99999999999999 9999977         66666666666654211   112233331     


Q ss_pred             HHHHHHHhcCCccEEEeccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILR  104 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~  104 (223)
                           .+.++++|+||+|++...
T Consensus       188 -----~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 -----DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             -----TCCCTTCCEEEECSCTTC
T ss_pred             -----HHhhCCCCEEEECCCCCC
Confidence                 345678999999999654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.54  E-value=2.2e-08  Score=85.82  Aligned_cols=97  Identities=23%  Similarity=0.304  Sum_probs=64.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++++|+++|||| ||+|++++..|++.|++|++++|         +.++.+++.+++.   ... .+..|   +      
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R---------~~~~a~~la~~~~---~~~-~~~~d---l------  417 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANR---------TYERALELAEAIG---GKA-LSLTD---L------  417 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEES---------SHHHHHHHHHHTT---C-C-EETTT---T------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHcC---Cce-eeHHH---h------
Confidence            467899999999 59999999999999999999987         6666655554442   111 11111   1      


Q ss_pred             HHHhc--CCccEEEeccCCCCC-----CCCCCCCHHHHHHHHHhhhhHH
Q psy16220         86 ALENF--GRIDIVINNAGILRD-----KSFARISDTDWQLVQDVHLTGA  127 (223)
Q Consensus        86 ~~~~~--~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~  127 (223)
                        +.+  +.+|+||||+|....     .++.+.+.++|...+++|+.+.
T Consensus       418 --~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          418 --DNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             --TTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             --hhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence              122  358999999997432     3455666777888889998765

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.51  E-value=1.6e-07  Score=67.69  Aligned_cols=77  Identities=14%  Similarity=0.133  Sum_probs=55.7

Q ss_pred             CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCc--cchHHHHHHHHHhcCCc
Q psy16220         19 AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSV--VDGDKIVQTALENFGRI   93 (223)
Q Consensus        19 ~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~i   93 (223)
                      +-++.++++.|++.|++|++..|+.....      ...+..+.+++.+.   .+.+|+.+.  ++++.+++.+.+.+|+ 
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~------~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-   98 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKD------AHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-   98 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTT------SCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCccccc------ccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-
Confidence            45889999999999999999877432211      11112334444444   345588888  7888999999888999 


Q ss_pred             cEEEeccCC
Q psy16220         94 DIVINNAGI  102 (223)
Q Consensus        94 d~li~~ag~  102 (223)
                      |+||||||.
T Consensus        99 dVLVnnAgg  107 (157)
T 3gxh_A           99 DVLVHCLAN  107 (157)
T ss_dssp             CEEEECSBS
T ss_pred             CEEEECCCC
Confidence            999999996

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.51  E-value=4.6e-07  Score=71.20  Aligned_cols=78  Identities=18%  Similarity=0.167  Sum_probs=55.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|         +.++.+++.+++...+   ..+..+..+.     
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R---------~~~~~~~la~~~~~~~---~~~~~~~~~~-----  176 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR---------TVSRAEELAKLFAHTG---SIQALSMDEL-----  176 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS---------SHHHHHHHHHHTGGGS---SEEECCSGGG-----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEEC---------CHHHHHHHHHHhhccC---CeeEecHHHh-----
Confidence            3567899999998 69999999999999999999977         6666666655554321   1222232211     


Q ss_pred             HHHHhcCCccEEEeccCCCC
Q psy16220         85 TALENFGRIDIVINNAGILR  104 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~  104 (223)
                        . + +.+|+||++++...
T Consensus       177 --~-~-~~~DivVn~t~~~~  192 (271)
T 1nyt_A          177 --E-G-HEFDLIINATSSGI  192 (271)
T ss_dssp             --T-T-CCCSEEEECCSCGG
T ss_pred             --c-c-CCCCEEEECCCCCC
Confidence              1 1 68999999998654

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.49  E-value=4.2e-07  Score=75.51  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=59.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC---CeEEEEccCCCCCCCCCChhhhhHHHHHHHHh----CCccccccCCccchHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERG---ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GGKAVPNYNSVVDGDKI   82 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G---~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~   82 (223)
                      ++++|+|+ |+||+++++.|+++|   ..|++.+|         +..+.+.+.+++...    ...+..|+.|..+++++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r---------~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~   71 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASR---------TLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL   71 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEES---------CHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEEC---------CHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH
Confidence            47899999 899999999999998   48999987         777777777777653    22234566666666665


Q ss_pred             HHHHHHhcCCccEEEeccCC
Q psy16220         83 VQTALENFGRIDIVINNAGI  102 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~  102 (223)
                      ++..     ++|+|||+++.
T Consensus        72 l~~~-----~~DvVin~ag~   86 (405)
T 4ina_A           72 INEV-----KPQIVLNIALP   86 (405)
T ss_dssp             HHHH-----CCSEEEECSCG
T ss_pred             HHhh-----CCCEEEECCCc
Confidence            5554     69999999984

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.47  E-value=1.8e-07  Score=76.74  Aligned_cols=107  Identities=19%  Similarity=0.213  Sum_probs=64.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .+.+++++|+|+ |+||+++++.+...|++|++++|         +..+.+...+.+   +..+..+..+..+.+..   
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~---------~~~~~~~~~~~~---g~~~~~~~~~~~~l~~~---  226 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDV---------NHKRLQYLDDVF---GGRVITLTATEANIKKS---  226 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHT---TTSEEEEECCHHHHHHH---
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC---------CHHHHHHHHHhc---CceEEEecCCHHHHHHH---
Confidence            367899999999 99999999999999999999987         555444332222   22233333333332222   


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                       .   ...|++|++++.....                   .+..+.+..++.|++  .+.||++++..
T Consensus       227 -~---~~~DvVi~~~g~~~~~-------------------~~~li~~~~l~~mk~--gg~iV~v~~~~  269 (369)
T 2eez_A          227 -V---QHADLLIGAVLVPGAK-------------------APKLVTRDMLSLMKE--GAVIVDVAVDQ  269 (369)
T ss_dssp             -H---HHCSEEEECCC--------------------------CCSCHHHHTTSCT--TCEEEECC---
T ss_pred             -H---hCCCEEEECCCCCccc-------------------cchhHHHHHHHhhcC--CCEEEEEecCC
Confidence             2   2589999999853210                   012223445555553  37899998754

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.42  E-value=3.6e-06  Score=67.90  Aligned_cols=151  Identities=11%  Similarity=0.051  Sum_probs=94.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCC----hhhhhHHHHHHHHhCCccccccCCcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKS----SKAADTVVAEIRSKGGKAVPNYNSVV   77 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (223)
                      .++++||||+|.+|.+++..|+.+|.       .|+++|+         +    ..+.+....++.........++....
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di---------~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~   75 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEI---------PNEKAQKALQGVMMEIDDCAFPLLAGMTAHA   75 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC---------SCHHHHHHHHHHHHHHHTTTCTTEEEEEEES
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcC---------CCccccccchhhHHHHhhhcccccCcEEEec
Confidence            35899999999999999999999885       7888876         4    33343333444432111222222222


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc---
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG---  154 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~---  154 (223)
                      +       ..+.+...|++||.||....   ...+.   .+.+..|+.....+++.+..+-  .+.++||++|....   
T Consensus        76 ~-------~~~al~~aD~Vi~~ag~~~~---~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t  140 (329)
T 1b8p_A           76 D-------PMTAFKDADVALLVGARPRG---PGMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNA  140 (329)
T ss_dssp             S-------HHHHTTTCSEEEECCCCCCC---TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHH
T ss_pred             C-------cHHHhCCCCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHH
Confidence            2       23345679999999996432   12232   3467888888888888773331  13468888887442   


Q ss_pred             -----cc-cCCCCchhhhhHHHHHHHHHHHHhhhC
Q psy16220        155 -----LL-GNFGQANYSAAKMALVGLSNTLSIEGE  183 (223)
Q Consensus       155 -----~~-~~~~~~~y~~sK~a~~~~~~~l~~e~~  183 (223)
                           .. +.|....|+.++.--..+...++..+.
T Consensus       141 ~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          141 YIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence                 11 334445688887666667777776654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.42  E-value=4.5e-07  Score=73.56  Aligned_cols=80  Identities=24%  Similarity=0.280  Sum_probs=56.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|++++||+.+++.+...|++|+++++         ++.+.+...+   +.+....+|..+..+..+.+.++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---------~~~~~~~~~~---~~g~~~~~d~~~~~~~~~~~~~~~  222 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---------SKEKVDLLKT---KFGFDDAFNYKEESDLTAALKRCF  222 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHH---TSCCSEEEETTSCSCSHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHH---HcCCceEEecCCHHHHHHHHHHHh
Confidence            4789999999999999999999999999999876         5544433321   224344445555445555555443


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .  +++|++|+|+|
T Consensus       223 ~--~~~d~vi~~~g  234 (345)
T 2j3h_A          223 P--NGIDIYFENVG  234 (345)
T ss_dssp             T--TCEEEEEESSC
T ss_pred             C--CCCcEEEECCC
Confidence            2  57999999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.38  E-value=7.5e-07  Score=71.74  Aligned_cols=79  Identities=15%  Similarity=0.196  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||++|||+++++.+...|++|+++++         ++.+.+...    +.+.....|..+.+..+.+.+.. 
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---------~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~-  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---------TAQKAQSAL----KAGAWQVINYREEDLVERLKEIT-  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---------SHHHHHHHH----HHTCSEEEETTTSCHHHHHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHH----HcCCCEEEECCCccHHHHHHHHh-
Confidence            4789999999999999999999999999999876         554443332    23433444544433223322221 


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      . -.++|++|+|+|
T Consensus       206 ~-~~~~D~vi~~~g  218 (327)
T 1qor_A          206 G-GKKVRVVYDSVG  218 (327)
T ss_dssp             T-TCCEEEEEECSC
T ss_pred             C-CCCceEEEECCc
Confidence            1 136999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.37  E-value=1.1e-06  Score=70.86  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||++|||+++++.+...|++|+++++         ++++.+..    .+.+.....|..+.+..+.+.+ ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---------~~~~~~~~----~~~g~~~~~d~~~~~~~~~i~~-~~  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---------TEEKAETA----RKLGCHHTINYSTQDFAEVVRE-IT  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---------SHHHHHHH----HHHTCSEEEETTTSCHHHHHHH-HH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH----HHcCCCEEEECCCHHHHHHHHH-Hh
Confidence            4789999999999999999999999999999987         55444433    2234344445444332233222 22


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                      . -.++|++|+|+|.
T Consensus       211 ~-~~~~d~vi~~~g~  224 (333)
T 1wly_A          211 G-GKGVDVVYDSIGK  224 (333)
T ss_dssp             T-TCCEEEEEECSCT
T ss_pred             C-CCCCeEEEECCcH
Confidence            1 1369999999984

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.33  E-value=2.7e-06  Score=68.00  Aligned_cols=86  Identities=17%  Similarity=0.249  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++|++||+|+ ||+|++++..|++.|+ +|++++|+.      +..++.+++.+++..... ......+.++.+.+ 
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~------~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l-  220 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKD------DFYANAEKTVEKINSKTD-CKAQLFDIEDHEQL-  220 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS------TTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHH-
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCC------chHHHHHHHHHHhhhhcC-CceEEeccchHHHH-
Confidence            4578999999998 6999999999999999 899998821      016677777777766432 11222222222222 


Q ss_pred             HHHHHhcCCccEEEeccCC
Q psy16220         84 QTALENFGRIDIVINNAGI  102 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~  102 (223)
                         .+.....|+|||+...
T Consensus       221 ---~~~l~~aDiIINaTp~  236 (315)
T 3tnl_A          221 ---RKEIAESVIFTNATGV  236 (315)
T ss_dssp             ---HHHHHTCSEEEECSST
T ss_pred             ---HhhhcCCCEEEECccC
Confidence               2222368999998764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.32  E-value=3.1e-06  Score=66.77  Aligned_cols=80  Identities=20%  Similarity=0.269  Sum_probs=57.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|         +.++.+++.+++............+.++....+ 
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R---------~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l-  192 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADL---------DTSRAQALADVINNAVGREAVVGVDARGIEDVI-  192 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------SHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHH-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEEC---------CHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHH-
Confidence            578999999998 7999999999999999 6999977         777777777777655332222222333333221 


Q ss_pred             HHHHhcCCccEEEeccCC
Q psy16220         85 TALENFGRIDIVINNAGI  102 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~  102 (223)
                            ...|+|||+...
T Consensus       193 ------~~~DiVInaTp~  204 (283)
T 3jyo_A          193 ------AAADGVVNATPM  204 (283)
T ss_dssp             ------HHSSEEEECSST
T ss_pred             ------hcCCEEEECCCC
Confidence                  247999998764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.31  E-value=1.2e-06  Score=71.40  Aligned_cols=77  Identities=19%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++||+|+++|||+++++.+...|+ +|+++++         ++.+.+...++   .+....+|..+. +..+.+.+...
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---------~~~~~~~~~~~---~g~~~~~d~~~~-~~~~~~~~~~~  228 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---------THEKCILLTSE---LGFDAAINYKKD-NVAEQLRESCP  228 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---------CHHHHHHHHHT---SCCSEEEETTTS-CHHHHHHHHCT
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---------CHHHHHHHHHH---cCCceEEecCch-HHHHHHHHhcC
Confidence            8999999999999999999999999 9999876         44444333221   233334444442 23232332221


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                        +.+|++|+|+|
T Consensus       229 --~~~d~vi~~~G  239 (357)
T 2zb4_A          229 --AGVDVYFDNVG  239 (357)
T ss_dssp             --TCEEEEEESCC
T ss_pred             --CCCCEEEECCC
Confidence              27999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.29  E-value=1.9e-06  Score=70.23  Aligned_cols=78  Identities=19%  Similarity=0.244  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||++|||+++++.+...|++|+++++         ++++.+.. ++   .+....+|..+.+    ..+++.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~-~~---~g~~~~~~~~~~~----~~~~~~  224 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---------SQKKLQMA-EK---LGAAAGFNYKKED----FSEATL  224 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHH-HH---HTCSEEEETTTSC----HHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH-HH---cCCcEEEecCChH----HHHHHH
Confidence            4789999999999999999999999999999976         55554433 22   2444444444432    223333


Q ss_pred             Hhc--CCccEEEeccCC
Q psy16220         88 ENF--GRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~--~~id~li~~ag~  102 (223)
                      +..  .++|++|+|+|.
T Consensus       225 ~~~~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          225 KFTKGAGVNLILDCIGG  241 (354)
T ss_dssp             HHTTTSCEEEEEESSCG
T ss_pred             HHhcCCCceEEEECCCc
Confidence            322  369999999983

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.29  E-value=3.3e-06  Score=68.45  Aligned_cols=77  Identities=21%  Similarity=0.250  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|+++++|+.+++.+...|++|+++++         ++.+.+..    .+.+....+|..+. +.   .+.+.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---------~~~~~~~~----~~~ga~~~~d~~~~-~~---~~~~~  228 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---------SEDKLRRA----KALGADETVNYTHP-DW---PKEVR  228 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---------SHHHHHHH----HHHTCSEEEETTST-TH---HHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH----HhcCCCEEEcCCcc-cH---HHHHH
Confidence            4789999999999999999999999999999876         55554433    22233333444432 22   22333


Q ss_pred             Hhc--CCccEEEeccC
Q psy16220         88 ENF--GRIDIVINNAG  101 (223)
Q Consensus        88 ~~~--~~id~li~~ag  101 (223)
                      +..  .++|++|+++|
T Consensus       229 ~~~~~~~~d~vi~~~g  244 (343)
T 2eih_A          229 RLTGGKGADKVVDHTG  244 (343)
T ss_dssp             HHTTTTCEEEEEESSC
T ss_pred             HHhCCCCceEEEECCC
Confidence            322  37999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.27  E-value=2.5e-06  Score=69.46  Aligned_cols=77  Identities=19%  Similarity=0.287  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|+++|||+++++.+...|++|+++++         ++++.+.    +++.+.....|..+.+    ..+++.
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~----~~~~ga~~~~d~~~~~----~~~~~~  232 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAG---------TEEGQKI----VLQNGAHEVFNHREVN----YIDKIK  232 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHH----HHHTTCSEEEETTSTT----HHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---------ChhHHHH----HHHcCCCEEEeCCCch----HHHHHH
Confidence            4789999999999999999999999999999876         5444432    2333433344444332    223333


Q ss_pred             Hhc--CCccEEEeccC
Q psy16220         88 ENF--GRIDIVINNAG  101 (223)
Q Consensus        88 ~~~--~~id~li~~ag  101 (223)
                      +..  .++|++|+|+|
T Consensus       233 ~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          233 KYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             HHHCTTCEEEEEESCH
T ss_pred             HHcCCCCcEEEEECCC
Confidence            322  37999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.27  E-value=2e-06  Score=69.48  Aligned_cols=79  Identities=18%  Similarity=0.245  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|++++||.++++.+...|++|+++++         ++++.+...   ++.+.....|..+.+ ..+.+.+..
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~~---~~~g~~~~~~~~~~~-~~~~~~~~~  215 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---------GAEKCRFLV---EELGFDGAIDYKNED-LAAGLKREC  215 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHH---HTTCCSEEEETTTSC-HHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHH---HHcCCCEEEECCCHH-HHHHHHHhc
Confidence            4789999999999999999999999999999876         555444332   233444344444432 222222222


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                        .+++|++|+|+|
T Consensus       216 --~~~~d~vi~~~g  227 (336)
T 4b7c_A          216 --PKGIDVFFDNVG  227 (336)
T ss_dssp             --TTCEEEEEESSC
T ss_pred             --CCCceEEEECCC
Confidence              247999999998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.24  E-value=3e-06  Score=68.38  Aligned_cols=78  Identities=18%  Similarity=0.264  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+++||.++++.+...|++|+++++         +.++.+.    +++.+.....+..+.+    ..+.+.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~----~~~~ga~~~~~~~~~~----~~~~~~  210 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---------TDEKLKI----AKEYGAEYLINASKED----ILRQVL  210 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---------SHHHHHH----HHHTTCSEEEETTTSC----HHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHH----HHHcCCcEEEeCCCch----HHHHHH
Confidence            5789999999999999999999999999999876         5554442    2333444444444432    223333


Q ss_pred             Hhc--CCccEEEeccCC
Q psy16220         88 ENF--GRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~--~~id~li~~ag~  102 (223)
                      +..  .++|++|+|+|.
T Consensus       211 ~~~~~~g~D~vid~~g~  227 (334)
T 3qwb_A          211 KFTNGKGVDASFDSVGK  227 (334)
T ss_dssp             HHTTTSCEEEEEECCGG
T ss_pred             HHhCCCCceEEEECCCh
Confidence            322  369999999983

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.23  E-value=7.6e-07  Score=74.88  Aligned_cols=78  Identities=18%  Similarity=0.168  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++++++|+| +|++|+++++.|++.|++|++++|         +..+.+.+.+.+.. ...+..|+.|..+..+++    
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R---------~~~~a~~la~~~~~-~~~~~~Dv~d~~~l~~~l----   66 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACR---------TLESAKKLSAGVQH-STPISLDVNDDAALDAEV----   66 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEES---------SHHHHHHTTTTCTT-EEEEECCTTCHHHHHHHH----
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEEC---------CHHHHHHHHHhcCC-ceEEEeecCCHHHHHHHH----
Confidence            367899998 799999999999999999999987         44443322211110 011223444433333222    


Q ss_pred             HhcCCccEEEeccCCC
Q psy16220         88 ENFGRIDIVINNAGIL  103 (223)
Q Consensus        88 ~~~~~id~li~~ag~~  103 (223)
                         .++|+|||+++..
T Consensus        67 ---~~~DvVIn~a~~~   79 (450)
T 1ff9_A           67 ---AKHDLVISLIPYT   79 (450)
T ss_dssp             ---TTSSEEEECCC--
T ss_pred             ---cCCcEEEECCccc
Confidence               3799999999853

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.23  E-value=2.5e-06  Score=68.66  Aligned_cols=78  Identities=18%  Similarity=0.259  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+++||+.+++.+...|++|+++++         ++++.+..    ++.+.....+..+.+    ..+.+.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~----~~~Ga~~~~~~~~~~----~~~~~~  202 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---------SPEKAAHA----KALGAWETIDYSHED----VAKRVL  202 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---------SHHHHHHH----HHHTCSEEEETTTSC----HHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH----HHcCCCEEEeCCCcc----HHHHHH
Confidence            4789999999999999999999999999999876         55554432    233444444444432    223333


Q ss_pred             Hhc--CCccEEEeccCC
Q psy16220         88 ENF--GRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~--~~id~li~~ag~  102 (223)
                      +..  ..+|++|+++|.
T Consensus       203 ~~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          203 ELTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             HHTTTCCEEEEEESSCG
T ss_pred             HHhCCCCceEEEECCCh
Confidence            333  369999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.22  E-value=4e-06  Score=68.08  Aligned_cols=80  Identities=23%  Similarity=0.297  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .++++||+|++++||+.+++.+... |++|+++++         ++.+.+..    ++.+.....+..+.+ ..+.+.++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---------~~~~~~~~----~~~g~~~~~~~~~~~-~~~~~~~~  235 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---------REEAVEAA----KRAGADYVINASMQD-PLAEIRRI  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---------SHHHHHHH----HHHTCSEEEETTTSC-HHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHHH----HHhCCCEEecCCCcc-HHHHHHHH
Confidence            4789999999999999999999999 999999876         55444332    223444444544432 22222222


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      ... +++|++|+++|.
T Consensus       236 ~~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          236 TES-KGVDAVIDLNNS  250 (347)
T ss_dssp             TTT-SCEEEEEESCCC
T ss_pred             hcC-CCceEEEECCCC
Confidence            211 589999999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.21  E-value=4.6e-06  Score=68.22  Aligned_cols=75  Identities=23%  Similarity=0.397  Sum_probs=51.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCCh---hhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSS---KAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++|+++||+|+ |++|..+++.+...|++|+++++         +.   ++.+ .   +.+.+.... | .+  +..+.+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~---------~~~~~~~~~-~---~~~~ga~~v-~-~~--~~~~~~  240 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANR---------REPTEVEQT-V---IEETKTNYY-N-SS--NGYDKL  240 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEES---------SCCCHHHHH-H---HHHHTCEEE-E-CT--TCSHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC---------CccchHHHH-H---HHHhCCcee-c-hH--HHHHHH
Confidence            34899999999 99999999999999999999987         33   3332 2   222343333 4 33  332333


Q ss_pred             HHHHHhcCCccEEEeccCC
Q psy16220         84 QTALENFGRIDIVINNAGI  102 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~  102 (223)
                      .+ . . +++|++|+++|.
T Consensus       241 ~~-~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          241 KD-S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             HH-H-H-CCEEEEEECCCC
T ss_pred             HH-h-C-CCCCEEEECCCC
Confidence            33 2 2 689999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.20  E-value=2.7e-06  Score=71.82  Aligned_cols=79  Identities=18%  Similarity=0.151  Sum_probs=50.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   82 (223)
                      .++++++++|+|+ |++|++++..|++. |++|++++|         +..+.+.+.+.   .+. .+..|..|..+...+
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R---------~~~ka~~la~~---~~~~~~~~D~~d~~~l~~~   85 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACR---------TLANAQALAKP---SGSKAISLDVTDDSALDKV   85 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEES---------SHHHHHHHHGG---GTCEEEECCTTCHHHHHHH
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEEC---------CHHHHHHHHHh---cCCcEEEEecCCHHHHHHH
Confidence            4577889999997 99999999999998 789999987         55554443322   111 123344443333222


Q ss_pred             HHHHHHhcCCccEEEeccCCC
Q psy16220         83 VQTALENFGRIDIVINNAGIL  103 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~  103 (223)
                      +       ..+|+|||+++..
T Consensus        86 l-------~~~DvVIn~tp~~   99 (467)
T 2axq_A           86 L-------ADNDVVISLIPYT   99 (467)
T ss_dssp             H-------HTSSEEEECSCGG
T ss_pred             H-------cCCCEEEECCchh
Confidence            2       2699999999853

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.19  E-value=8.4e-06  Score=68.46  Aligned_cols=81  Identities=27%  Similarity=0.405  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-----------
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-----------   76 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   76 (223)
                      .|+++||+|++|+||..+++.+...|++|+++++         ++.+.+..    ++.+.....+..+.           
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---------~~~~~~~~----~~lGa~~~i~~~~~~~~~~~~~~~~  286 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---------SAQKEAAV----RALGCDLVINRAELGITDDIADDPR  286 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHH----HHTTCCCEEEHHHHTCCTTGGGCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HhcCCCEEEeccccccccccccccc
Confidence            4789999999999999999999999999998875         55544432    33343333322211           


Q ss_pred             ---cchHHHHHHHHHhcC-CccEEEeccC
Q psy16220         77 ---VDGDKIVQTALENFG-RIDIVINNAG  101 (223)
Q Consensus        77 ---~~~~~~~~~~~~~~~-~id~li~~ag  101 (223)
                         .+.+.+.+.+.+..+ .+|++|+++|
T Consensus       287 ~~~~~~~~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          287 RVVETGRKLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCSEEEECSC
T ss_pred             ccchhhhHHHHHHHHHhCCCceEEEECCC
Confidence               112333455554444 6999999998

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.17  E-value=8.1e-06  Score=64.07  Aligned_cols=78  Identities=15%  Similarity=0.134  Sum_probs=54.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|         +.++.+++.+++...+ .  .+..+..+..    
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R---------~~~~a~~l~~~~~~~~-~--~~~~~~~~~~----  177 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANR---------TFSKTKELAERFQPYG-N--IQAVSMDSIP----  177 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEES---------SHHHHHHHHHHHGGGS-C--EEEEEGGGCC----
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHccccC-C--eEEeeHHHhc----
Confidence            3567899999998 79999999999999999999987         6666666666664322 1  1111111110    


Q ss_pred             HHHHhcCCccEEEeccCCCC
Q psy16220         85 TALENFGRIDIVINNAGILR  104 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~  104 (223)
                         +  +..|+||++++...
T Consensus       178 ---~--~~~DivIn~t~~~~  192 (272)
T 1p77_A          178 ---L--QTYDLVINATSAGL  192 (272)
T ss_dssp             ---C--SCCSEEEECCCC--
T ss_pred             ---c--CCCCEEEECCCCCC
Confidence               1  47999999998643

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.17  E-value=7.9e-06  Score=66.51  Aligned_cols=79  Identities=22%  Similarity=0.315  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+++||.++++.+...|++|+++++         ++++.+..    ++.+.....+..+.+ ....+.+..
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~----~~lGa~~~~~~~~~~-~~~~~~~~~  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---------STGKCEAC----ERLGAKRGINYRSED-FAAVIKAET  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHH----HHHTCSEEEETTTSC-HHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HhcCCCEEEeCCchH-HHHHHHHHh
Confidence            4789999999999999999999999999999976         55554432    233444444444433 333333332


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                        .+++|++|+++|.
T Consensus       233 --~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 --GQGVDIILDMIGA  245 (353)
T ss_dssp             --SSCEEEEEESCCG
T ss_pred             --CCCceEEEECCCH
Confidence              3579999999983

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.16  E-value=8.7e-06  Score=66.51  Aligned_cols=78  Identities=21%  Similarity=0.291  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+|++|..+++.+...|++|+++++         ++++.+.    +++.+.....+..+ .+..+.+.+..
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---------~~~~~~~----~~~~Ga~~~~~~~~-~~~~~~~~~~~  228 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---------SDEKSAF----LKSLGCDRPINYKT-EPVGTVLKQEY  228 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---------SHHHHHH----HHHTTCSEEEETTT-SCHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---------CHHHHHH----HHHcCCcEEEecCC-hhHHHHHHHhc
Confidence            4789999999999999999999999999999876         4444433    22334433334333 23333333221


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                        -+.+|++|+++|
T Consensus       229 --~~g~D~vid~~g  240 (362)
T 2c0c_A          229 --PEGVDVVYESVG  240 (362)
T ss_dssp             --TTCEEEEEECSC
T ss_pred             --CCCCCEEEECCC
Confidence              147999999998

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.16  E-value=2.5e-05  Score=63.43  Aligned_cols=78  Identities=14%  Similarity=0.171  Sum_probs=52.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++++||+||+++||..+++.+...|++|+++++         +.++.+..    ++.+.....+..+. +..+.+.++..
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---------~~~~~~~~----~~~Ga~~~~~~~~~-~~~~~v~~~~~  230 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---------RDEQIALL----KDIGAAHVLNEKAP-DFEATLREVMK  230 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---------CGGGHHHH----HHHTCSEEEETTST-THHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH----HHcCCCEEEECCcH-HHHHHHHHHhc
Confidence            379999999999999999999999999999976         44444332    23344444444332 23333333222


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                      . ..+|++|.++|
T Consensus       231 ~-~g~D~vid~~g  242 (349)
T 3pi7_A          231 A-EQPRIFLDAVT  242 (349)
T ss_dssp             H-HCCCEEEESSC
T ss_pred             C-CCCcEEEECCC
Confidence            1 37999999998

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.08  E-value=2.2e-05  Score=63.52  Aligned_cols=77  Identities=21%  Similarity=0.288  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|+ +++|..+++.+...|++|+++++         ++.+.+..    ++.+....+|..+. +..+.+.+..
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~----~~lGa~~~~d~~~~-~~~~~~~~~~  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI---------GDEKLELA----KELGADLVVNPLKE-DAAKFMKEKV  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS---------CHHHHHHH----HHTTCSEEECTTTS-CHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HHCCCCEEecCCCc-cHHHHHHHHh
Confidence            4789999999 88999999999999999999876         55544432    23344334444432 3333333322


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                         +.+|++|+++|.
T Consensus       229 ---~~~d~vid~~g~  240 (339)
T 1rjw_A          229 ---GGVHAAVVTAVS  240 (339)
T ss_dssp             ---SSEEEEEESSCC
T ss_pred             ---CCCCEEEECCCC
Confidence               689999999983

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.02  E-value=1.2e-05  Score=65.12  Aligned_cols=78  Identities=18%  Similarity=0.190  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|++++||..+++.+...|++|+++++         ++++.+..    .+.+....++..+.+ .   .+.+.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~----~~lga~~~~~~~~~~-~---~~~~~  206 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTR---------NNKHTEEL----LRLGAAYVIDTSTAP-L---YETVM  206 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---------SSTTHHHH----HHHTCSEEEETTTSC-H---HHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HhCCCcEEEeCCccc-H---HHHHH
Confidence            4789999999999999999998889999999987         34333322    223444444444432 2   22333


Q ss_pred             Hhc--CCccEEEeccCC
Q psy16220         88 ENF--GRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~--~~id~li~~ag~  102 (223)
                      +..  ..+|++|+|+|.
T Consensus       207 ~~~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          207 ELTNGIGADAAIDSIGG  223 (340)
T ss_dssp             HHTTTSCEEEEEESSCH
T ss_pred             HHhCCCCCcEEEECCCC
Confidence            322  379999999983

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.00  E-value=0.00022  Score=57.30  Aligned_cols=116  Identities=16%  Similarity=0.183  Sum_probs=68.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .++++||||+|.+|.+++..|+++|  ..|+++++         +..  .....++......  ..+....+.    ..+
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di---------~~~--~~~~~dL~~~~~~--~~v~~~~~t----~d~   70 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDV---------VNA--PGVTADISHMDTG--AVVRGFLGQ----QQL   70 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEES---------SSH--HHHHHHHHTSCSS--CEEEEEESH----HHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeC---------CCc--HhHHHHhhccccc--ceEEEEeCC----CCH
Confidence            3589999999999999999999988  78999876         222  1122233321110  011100001    122


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      .+.+...|++|++||.....   ..+.+   +.+..|+.....+.+.+..    .....+|+++|
T Consensus        71 ~~al~gaDvVi~~ag~~~~~---g~~r~---dl~~~N~~~~~~i~~~i~~----~~p~~~viv~S  125 (326)
T 1smk_A           71 EAALTGMDLIIVPAGVPRKP---GMTRD---DLFKINAGIVKTLCEGIAK----CCPRAIVNLIS  125 (326)
T ss_dssp             HHHHTTCSEEEECCCCCCCS---SCCCS---HHHHHHHHHHHHHHHHHHH----HCTTSEEEECC
T ss_pred             HHHcCCCCEEEEcCCcCCCC---CCCHH---HHHHHHHHHHHHHHHHHHh----hCCCeEEEEEC
Confidence            23346799999999964321   11222   4477888888888887643    33344555555

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.96  E-value=3e-05  Score=62.80  Aligned_cols=77  Identities=25%  Similarity=0.350  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|++|+||..+++.+...|++|+++++         +.++.+..    ++.+.....+..  .   ...+.+.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~----~~~ga~~v~~~~--~---~~~~~v~  220 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN---------RTAATEFV----KSVGADIVLPLE--E---GWAKAVR  220 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------SGGGHHHH----HHHTCSEEEESS--T---THHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HhcCCcEEecCc--h---hHHHHHH
Confidence            4789999999999999999999999999999876         44444322    223433333332  2   2333344


Q ss_pred             HhcC--CccEEEeccCC
Q psy16220         88 ENFG--RIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~--~id~li~~ag~  102 (223)
                      +..+  .+|++|+++|.
T Consensus       221 ~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          221 EATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             HHTTTSCEEEEEESCC-
T ss_pred             HHhCCCCceEEEECCch
Confidence            3332  69999999984

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.95  E-value=0.00017  Score=57.64  Aligned_cols=155  Identities=12%  Similarity=0.089  Sum_probs=87.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc--cccccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK--AVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   86 (223)
                      +++||||+|.+|.+++..|+.+|.  .+++++++       .+..+.+....++......  ...++.+..      +.+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~-------~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~------d~l   68 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGRE-------HSINKLEGLREDIYDALAGTRSDANIYVES------DEN   68 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECG-------GGHHHHHHHHHHHHHHHTTSCCCCEEEEEE------TTC
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCC-------CchhhhHHHHHHHHHhHHhcCCCeEEEeCC------cch
Confidence            689999999999999999998874  57777641       0222222222223221111  111222111      012


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec-Cccc--------cc
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSGL--------LG  157 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS-~~~~--------~~  157 (223)
                      .+.+...|++||.||.... +  ..+.   ...++.|+.....+.+.+..+    . .++|+++| ....        .+
T Consensus        69 ~~al~gaD~Vi~~Ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~-~~~vlv~SNPv~~~t~~~~k~~~  137 (313)
T 1hye_A           69 LRIIDESDVVIITSGVPRK-E--GMSR---MDLAKTNAKIVGKYAKKIAEI----C-DTKIFVITNPVDVMTYKALVDSK  137 (313)
T ss_dssp             GGGGTTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHH----C-CCEEEECSSSHHHHHHHHHHHHC
T ss_pred             HHHhCCCCEEEECCCCCCC-C--CCcH---HHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecCcHHHHHHHHHHhhC
Confidence            2345679999999996431 1  2222   355889999888888887443    3 34555544 3321        13


Q ss_pred             CCCCchhhh-hHHHHHHHHHHHHhhhC--CCCeEE
Q psy16220        158 NFGQANYSA-AKMALVGLSNTLSIEGE--KNNIHC  189 (223)
Q Consensus       158 ~~~~~~y~~-sK~a~~~~~~~l~~e~~--~~~i~v  189 (223)
                      .|....++. +..-...+...++..+.  +..|+.
T Consensus       138 ~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~  172 (313)
T 1hye_A          138 FERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT  172 (313)
T ss_dssp             CCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC
T ss_pred             cChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE
Confidence            455566676 55555556666666553  334443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.94  E-value=4.1e-06  Score=58.74  Aligned_cols=35  Identities=26%  Similarity=0.337  Sum_probs=30.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++++++++|+|+ |++|+.+++.|.+.|++|+++++
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~   37 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDI   37 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            356778999998 99999999999999999999876

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.93  E-value=7.2e-05  Score=59.71  Aligned_cols=84  Identities=15%  Similarity=0.218  Sum_probs=56.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCC---hhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKS---SKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      .++++|++||+|+ ||.|++++..|++.|+ +|.++.|         +   .++.+++.+++...... .....+..+.+
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nR---------t~~~~~~a~~la~~~~~~~~~-~v~~~~~~~l~  212 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNR---------KDDFFEKAVAFAKRVNENTDC-VVTVTDLADQH  212 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC---------SSTHHHHHHHHHHHHHHHSSC-EEEEEETTCHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEEC---------CCchHHHHHHHHHHhhhccCc-ceEEechHhhh
Confidence            4578999999998 8999999999999998 7999987         5   66677777777654321 11111222221


Q ss_pred             HHHHHHHHhcCCccEEEeccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGIL  103 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~  103 (223)
                      . +.+.   ....|+|||+....
T Consensus       213 ~-~~~~---l~~~DiIINaTp~G  231 (312)
T 3t4e_A          213 A-FTEA---LASADILTNGTKVG  231 (312)
T ss_dssp             H-HHHH---HHHCSEEEECSSTT
T ss_pred             h-hHhh---ccCceEEEECCcCC
Confidence            1 1111   22479999987643

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.91  E-value=2.1e-05  Score=55.11  Aligned_cols=74  Identities=15%  Similarity=0.167  Sum_probs=48.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-cccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-AVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   86 (223)
                      +.++++|+|+ |.+|+++++.|.++|++|+++++         +++..+..    ...+.. +..|.++....    ++.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~---------~~~~~~~~----~~~~~~~~~gd~~~~~~l----~~~   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDK---------SKEKIELL----EDEGFDAVIADPTDESFY----RSL   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEES---------CHHHHHHH----HHTTCEEEECCTTCHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEEC---------CHHHHHHH----HHCCCcEEECCCCCHHHH----HhC
Confidence            4568999998 67999999999999999999987         55544333    333322 22344443322    211


Q ss_pred             HHhcCCccEEEeccC
Q psy16220         87 LENFGRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~~id~li~~ag  101 (223)
                        ...+.|++|.+.+
T Consensus        67 --~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 --DLEGVSAVLITGS   79 (141)
T ss_dssp             --CCTTCSEEEECCS
T ss_pred             --CcccCCEEEEecC
Confidence              2357899998776

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.90  E-value=3.7e-05  Score=60.49  Aligned_cols=76  Identities=18%  Similarity=0.251  Sum_probs=54.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+++|         +.++.+++.+++...+. +.  ..+.++.    
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R---------~~~~a~~la~~~~~~~~-~~--~~~~~~l----  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNR---------TFAKAEQLAELVAAYGE-VK--AQAFEQL----  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEES---------SHHHHHHHHHHHGGGSC-EE--EEEGGGC----
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEEC---------CHHHHHHHHHHhhccCC-ee--EeeHHHh----
Confidence            3568999999998 6999999999999996 8999987         77777777777654321 11  1111111    


Q ss_pred             HHHHHhcCCccEEEeccCCC
Q psy16220         84 QTALENFGRIDIVINNAGIL  103 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~  103 (223)
                            ....|+||++....
T Consensus       185 ------~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 ------KQSYDVIINSTSAS  198 (281)
T ss_dssp             ------CSCEEEEEECSCCC
T ss_pred             ------cCCCCEEEEcCcCC
Confidence                  04689999987643

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.88  E-value=7.2e-05  Score=62.97  Aligned_cols=81  Identities=26%  Similarity=0.356  Sum_probs=55.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-----------
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-----------   76 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   76 (223)
                      .|+++||+|++|++|...++.+...|++|+++++         ++.+.+.+    ++.+....++..+.           
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---------~~~~~~~~----~~lGa~~vi~~~~~d~~~~~~~~~~  294 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVS---------SPQKAEIC----RAMGAEAIIDRNAEGYRFWKDENTQ  294 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHH----HHHTCCEEEETTTTTCCSEEETTEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---------CHHHHHHH----HhhCCcEEEecCcCccccccccccc
Confidence            4789999999999999999999899999998865         55554432    33344333333221           


Q ss_pred             --cchHHHHHHHHHhcC--CccEEEeccC
Q psy16220         77 --VDGDKIVQTALENFG--RIDIVINNAG  101 (223)
Q Consensus        77 --~~~~~~~~~~~~~~~--~id~li~~ag  101 (223)
                        .+.+.+.+.+.+..+  .+|++|.++|
T Consensus       295 ~~~~~~~~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          295 DPKEWKRFGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             CHHHHHHHHHHHHHHHTSCCEEEEEECSC
T ss_pred             chHHHHHHHHHHHHHhCCCCCcEEEEcCC
Confidence              223344555555443  7999999998

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.87  E-value=0.00031  Score=55.86  Aligned_cols=116  Identities=18%  Similarity=0.157  Sum_probs=67.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +++||||+|.+|.+++..|+.+|.  .++++|++       .+..+.+....++..... .....+.. .+        .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~-------~~~~~~~~~~~dl~~~~~~~~~~~v~~-~~--------~   65 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP-------DKEDDTVGQAADTNHGIAYDSNTRVRQ-GG--------Y   65 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG-------GGHHHHHHHHHHHHHHHTTTCCCEEEE-CC--------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCC-------CChhhHHHHHHHHHHHHhhCCCcEEEe-CC--------H
Confidence            689999999999999999998875  57777651       022222222223332211 00000000 01        2


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN  152 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  152 (223)
                      +.+...|++|++||....   ...+.+   +.+..|+.....+.+.+    .+.....+|+++|.
T Consensus        66 ~a~~~aDvVi~~ag~~~~---~g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SN  120 (303)
T 1o6z_A           66 EDTAGSDVVVITAGIPRQ---PGQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTSN  120 (303)
T ss_dssp             GGGTTCSEEEECCCCCCC---TTCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECCS
T ss_pred             HHhCCCCEEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCC
Confidence            335679999999996431   122333   45788888888887776    44444455555553

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.87  E-value=3.1e-05  Score=61.50  Aligned_cols=79  Identities=23%  Similarity=0.319  Sum_probs=54.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++++++|+|+ ||+|++++..|++.|+ +|++++|         +.++.+++.+++.....    ...   +.    
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR---------~~~ka~~la~~~~~~~~----~~~---~~----  195 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANR---------TVEKAERLVREGDERRS----AYF---SL----  195 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECS---------SHHHHHHHHHHSCSSSC----CEE---CH----
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeC---------CHHHHHHHHHHhhhccC----cee---eH----
Confidence            3567899999998 7999999999999998 8999977         66666555444322100    111   11    


Q ss_pred             HHHHHhcCCccEEEeccCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILR  104 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~  104 (223)
                      +.+.+.....|+||++.+...
T Consensus       196 ~~~~~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          196 AEAETRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             HHHHHTGGGCSEEEECSCTTC
T ss_pred             HHHHhhhccCCEEEECCCCCC
Confidence            223344567999999998643

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.86  E-value=8.8e-05  Score=60.08  Aligned_cols=77  Identities=14%  Similarity=0.224  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+|++|...++.+...|++|+++++         +.++.+..    ++.+.....+..+  +..+.+.+. 
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---------~~~~~~~~----~~lGa~~vi~~~~--~~~~~~~~~-  213 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS---------RNETIEWT----KKMGADIVLNHKE--SLLNQFKTQ-  213 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC---------SHHHHHHH----HHHTCSEEECTTS--CHHHHHHHH-
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HhcCCcEEEECCc--cHHHHHHHh-
Confidence            5889999999999999999999999999999876         55544332    2334443344332  232323332 


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                       ..+.+|+++.++|
T Consensus       214 -~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          214 -GIELVDYVFCTFN  226 (346)
T ss_dssp             -TCCCEEEEEESSC
T ss_pred             -CCCCccEEEECCC
Confidence             2247999999988

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.85  E-value=5.6e-05  Score=59.22  Aligned_cols=75  Identities=19%  Similarity=0.247  Sum_probs=53.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|++++|         +.++.+++.+++.. . .+  .....++..   
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R---------~~~~a~~la~~~~~-~-~~--~~~~~~~l~---  178 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANR---------DMAKALALRNELDH-S-RL--RISRYEALE---  178 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECS---------CHHHHHHHHHHHCC-T-TE--EEECSGGGT---
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeC---------CHHHHHHHHHHhcc-C-Ce--eEeeHHHhc---
Confidence            3568999999998 6999999999999996 8999977         77777776666543 1 11  111222211   


Q ss_pred             HHHHHhcCCccEEEeccCC
Q psy16220         84 QTALENFGRIDIVINNAGI  102 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~  102 (223)
                          .  ...|+|||+...
T Consensus       179 ----~--~~~DivInaTp~  191 (272)
T 3pwz_A          179 ----G--QSFDIVVNATSA  191 (272)
T ss_dssp             ----T--CCCSEEEECSSG
T ss_pred             ----c--cCCCEEEECCCC
Confidence                1  478999998764

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.83  E-value=5.1e-05  Score=62.02  Aligned_cols=75  Identities=17%  Similarity=0.233  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|+ |+||..+++.+...|++|+++++         +..+.+...+   +.+.....|..+.       +.+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~---------~~~~~~~~~~---~lGa~~v~~~~~~-------~~~~  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVIST---------SPSKKEEALK---NFGADSFLVSRDQ-------EQMQ  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------CGGGHHHHHH---TSCCSEEEETTCH-------HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHH---hcCCceEEeccCH-------HHHH
Confidence            5789999996 99999999999899999999876         4444333221   2233333333321       1222


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                      +..+.+|++|.++|.
T Consensus       247 ~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          247 AAAGTLDGIIDTVSA  261 (366)
T ss_dssp             HTTTCEEEEEECCSS
T ss_pred             HhhCCCCEEEECCCc
Confidence            333689999999984

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.81  E-value=0.00011  Score=59.55  Aligned_cols=102  Identities=21%  Similarity=0.294  Sum_probs=64.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++         ++++.+..    ++.+.....+..+ .+.   .+.+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---------~~~~~~~~----~~~Ga~~~~~~~~-~~~---~~~v  228 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---------SDFRRELA----KKVGADYVINPFE-EDV---VKEV  228 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---------CHHHHHHH----HHHTCSEEECTTT-SCH---HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHH----HHhCCCEEECCCC-cCH---HHHH
Confidence            6789999999 9999999999988999 8999876         54444322    2334333334333 222   2333


Q ss_pred             HHhc--CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         87 LENF--GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      .+..  ..+|++|.++|..                         ...+.+++.++..  |+++.+++...
T Consensus       229 ~~~~~g~g~D~vid~~g~~-------------------------~~~~~~~~~l~~~--G~iv~~g~~~~  271 (348)
T 2d8a_A          229 MDITDGNGVDVFLEFSGAP-------------------------KALEQGLQAVTPA--GRVSLLGLYPG  271 (348)
T ss_dssp             HHHTTTSCEEEEEECSCCH-------------------------HHHHHHHHHEEEE--EEEEECCCCSS
T ss_pred             HHHcCCCCCCEEEECCCCH-------------------------HHHHHHHHHHhcC--CEEEEEccCCC
Confidence            3322  2699999999830                         1223344445544  89999987543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.70  E-value=0.00017  Score=58.29  Aligned_cols=76  Identities=20%  Similarity=0.371  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+|+||..+++.+...|++|+++ +         +.++.+.    +++.+... ++  +..+....+.+..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~---------~~~~~~~----~~~lGa~~-i~--~~~~~~~~~~~~~  212 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-A---------RGSDLEY----VRDLGATP-ID--ASREPEDYAAEHT  212 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E---------CHHHHHH----HHHHTSEE-EE--TTSCHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e---------CHHHHHH----HHHcCCCE-ec--cCCCHHHHHHHHh
Confidence            47899999999999999999999999999887 4         4444332    23334433 44  3333333333322


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      . -..+|++|.++|
T Consensus       213 ~-~~g~D~vid~~g  225 (343)
T 3gaz_A          213 A-GQGFDLVYDTLG  225 (343)
T ss_dssp             T-TSCEEEEEESSC
T ss_pred             c-CCCceEEEECCC
Confidence            2 137999999998

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.69  E-value=0.00031  Score=56.92  Aligned_cols=80  Identities=19%  Similarity=0.219  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   86 (223)
                      .|+++||+|+ |++|...++.+...|++|+++++         ++++.+.    +++.+....++..+ .+..+.+. +.
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~---------~~~~~~~----~~~lGa~~~~~~~~~~~~~~~i~-~~  232 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTAR---------SPRRLEV----AKNCGADVTLVVDPAKEEESSII-ER  232 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------CHHHHHH----HHHTTCSEEEECCTTTSCHHHHH-HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcC---------CHHHHHH----HHHhCCCEEEcCcccccHHHHHH-HH
Confidence            4789999997 89999999988889999888865         4444432    23334443444443 22222322 22


Q ss_pred             HH--hcCCccEEEeccCC
Q psy16220         87 LE--NFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~--~~~~id~li~~ag~  102 (223)
                      ..  .-+.+|++|.++|.
T Consensus       233 ~~~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          233 IRSAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHHHSSSCCSEEEECSCC
T ss_pred             hccccCCCCCEEEECCCC
Confidence            21  02369999999983

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.69  E-value=0.00011  Score=58.38  Aligned_cols=38  Identities=26%  Similarity=0.310  Sum_probs=32.5

Q ss_pred             cCCcE-EEEEcCCC-----------------c-hHHHHHHHHHHcCCeEEEEccCCC
Q psy16220          7 FDGRV-AIVTGAGA-----------------G-LGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus         7 ~~~~~-~lItGa~~-----------------g-iG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      ++||+ +|||+|..                 | .|.++|+.++++|+.|++++++..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            57777 99998865                 5 999999999999999999988543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.67  E-value=0.00019  Score=58.56  Aligned_cols=77  Identities=16%  Similarity=0.193  Sum_probs=51.0

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +++++++|+|+ |++|+++++.+...|++|++++|         +..+.+.+.+.....   +.....+.   +.+.+  
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr---------~~~r~~~~~~~~~~~---~~~~~~~~---~~~~~--  226 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDI---------NVERLSYLETLFGSR---VELLYSNS---AEIET--  226 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHGGG---SEEEECCH---HHHHH--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHhhCce---eEeeeCCH---HHHHH--
Confidence            56789999999 99999999999999999999987         555555443332111   11111111   22222  


Q ss_pred             HHhcCCccEEEeccCCC
Q psy16220         87 LENFGRIDIVINNAGIL  103 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~  103 (223)
                        .....|++|++++..
T Consensus       227 --~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          227 --AVAEADLLIGAVLVP  241 (361)
T ss_dssp             --HHHTCSEEEECCCCT
T ss_pred             --HHcCCCEEEECCCcC
Confidence              223699999999853

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.63  E-value=0.00011  Score=58.35  Aligned_cols=74  Identities=16%  Similarity=0.228  Sum_probs=49.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|++|++|..+++.+...|++|+++++         ++.+.+..    ++.+.....+..+   .+...+.+ 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~---------~~~~~~~~----~~~ga~~~~~~~~---~~~~~~~~-  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS---------RPEKLALP----LALGAEEAATYAE---VPERAKAW-  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---------SGGGSHHH----HHTTCSEEEEGGG---HHHHHHHT-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH----HhcCCCEEEECCc---chhHHHHh-
Confidence            4789999999999999999999999999999876         44444332    2223322222221   12222222 


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                         +++|++|+ +|.
T Consensus       188 ---~~~d~vid-~g~  198 (302)
T 1iz0_A          188 ---GGLDLVLE-VRG  198 (302)
T ss_dssp             ---TSEEEEEE-CSC
T ss_pred             ---cCceEEEE-CCH
Confidence               68999999 873

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.59  E-value=0.00028  Score=57.02  Aligned_cols=77  Identities=18%  Similarity=0.264  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||+|+ |++|...++.+...|+ +|+++++         ++++.+... ++    ....++..+ .+..+.+.++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---------~~~~~~~~~-~l----a~~v~~~~~-~~~~~~~~~~  227 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP---------NPYRLAFAR-PY----ADRLVNPLE-EDLLEVVRRV  227 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---------CHHHHGGGT-TT----CSEEECTTT-SCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHHH-Hh----HHhccCcCc-cCHHHHHHHh
Confidence            6789999999 9999999998888999 8999876         444433221 11    112223322 2333333333


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      .  -..+|++|.++|.
T Consensus       228 ~--~~g~D~vid~~g~  241 (343)
T 2dq4_A          228 T--GSGVEVLLEFSGN  241 (343)
T ss_dssp             H--SSCEEEEEECSCC
T ss_pred             c--CCCCCEEEECCCC
Confidence            2  2479999999983

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.58  E-value=0.00023  Score=58.31  Aligned_cols=76  Identities=21%  Similarity=0.348  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+|++|..+++.+...|++|+++++          ..+.+    .+++.+....++..+. +   ..+++.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~----------~~~~~----~~~~lGa~~v~~~~~~-~---~~~~~~  244 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS----------QDASE----LVRKLGADDVIDYKSG-S---VEEQLK  244 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC----------GGGHH----HHHHTTCSEEEETTSS-C---HHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC----------hHHHH----HHHHcCCCEEEECCch-H---HHHHHh
Confidence            5789999999999999999988889999988753          12222    2233344444444332 2   222332


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                      + .+++|++|.++|.
T Consensus       245 ~-~~g~D~vid~~g~  258 (375)
T 2vn8_A          245 S-LKPFDFILDNVGG  258 (375)
T ss_dssp             T-SCCBSEEEESSCT
T ss_pred             h-cCCCCEEEECCCC
Confidence            2 3689999999985

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.57  E-value=0.00024  Score=58.30  Aligned_cols=78  Identities=26%  Similarity=0.327  Sum_probs=51.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .+.+++++|+|+ |+||+.+++.+...|++|++.++         +..+.+...+.+   +..+..+..+..+    +++
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~---------~~~~l~~~~~~~---g~~~~~~~~~~~~----l~~  227 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDI---------NIDKLRQLDAEF---CGRIHTRYSSAYE----LEG  227 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHT---TTSSEEEECCHHH----HHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC---------CHHHHHHHHHhc---CCeeEeccCCHHH----HHH
Confidence            467899999998 99999999999999999999987         555444332222   2222222222222    222


Q ss_pred             HHHhcCCccEEEeccCCC
Q psy16220         86 ALENFGRIDIVINNAGIL  103 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~  103 (223)
                      ..   ...|++|++++..
T Consensus       228 ~l---~~aDvVi~~~~~p  242 (377)
T 2vhw_A          228 AV---KRADLVIGAVLVP  242 (377)
T ss_dssp             HH---HHCSEEEECCCCT
T ss_pred             HH---cCCCEEEECCCcC
Confidence            22   3589999998753

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.57  E-value=0.00037  Score=56.75  Aligned_cols=81  Identities=19%  Similarity=0.301  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||+|+ |++|...++.+...|++ |+++++         ++++.+.. +++ ..  .+.....+..+.+.+.+++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~~a-~~l-~~--~~~~~~~~~~~~~~~~~~v  244 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDI---------DEGRLKFA-KEI-CP--EVVTHKVERLSAEESAKKI  244 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEES---------CHHHHHHH-HHH-CT--TCEEEECCSCCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHHH-HHh-ch--hcccccccccchHHHHHHH
Confidence            4789999998 99999999888888998 888765         55554432 233 21  1111111222334555556


Q ss_pred             HHhc--CCccEEEeccCC
Q psy16220         87 LENF--GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~  102 (223)
                      .+..  ..+|++|.++|.
T Consensus       245 ~~~t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          245 VESFGGIEPAVALECTGV  262 (363)
T ss_dssp             HHHTSSCCCSEEEECSCC
T ss_pred             HHHhCCCCCCEEEECCCC
Confidence            5544  369999999983

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.56  E-value=0.0015  Score=52.78  Aligned_cols=124  Identities=15%  Similarity=0.114  Sum_probs=70.5

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVD   78 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (223)
                      ||.+ .++++++.|+|++|.+|.++|..++.+|.  .++++|+         +..+.+....++.....    .......
T Consensus         1 ~~~~-~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi---------~~~k~~g~a~DL~~~~~----~~~~i~~   66 (343)
T 3fi9_A            1 MSLS-YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP---------FAVGLEGVAEEIRHCGF----EGLNLTF   66 (343)
T ss_dssp             -CCC-CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS---------CHHHHHHHHHHHHHHCC----TTCCCEE
T ss_pred             CCcc-ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC---------CchhHHHHHHhhhhCcC----CCCceEE
Confidence            6543 25677899999999999999999999984  7999987         55555544444543311    0011110


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCc-EEEEecC
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGR-LVMTASN  152 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~-iv~vsS~  152 (223)
                      ..    ...+.+...|++|.+||... +  ...+   -.+.++.|+.-...+.+.+    .+. +.+. ++++|-.
T Consensus        67 t~----d~~~al~dADvVvitaG~p~-k--pG~~---R~dLl~~N~~I~~~i~~~i----~~~~p~a~~vlvvsNP  128 (343)
T 3fi9_A           67 TS----DIKEALTDAKYIVSSGGAPR-K--EGMT---REDLLKGNAEIAAQLGKDI----KSYCPDCKHVIIIFNP  128 (343)
T ss_dssp             ES----CHHHHHTTEEEEEECCC----------C---HHHHHHHHHHHHHHHHHHH----HHHCTTCCEEEECSSS
T ss_pred             cC----CHHHHhCCCCEEEEccCCCC-C--CCCC---HHHHHHHHHHHHHHHHHHH----HHhccCcEEEEEecCc
Confidence            01    11223457999999998532 1  1222   3345666766555555554    433 3354 5666543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.49  E-value=0.00037  Score=53.83  Aligned_cols=90  Identities=11%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-CC---------ChhhhhHHHHHHHHhCCcccccc-
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-GK---------SSKAADTVVAEIRSKGGKAVPNY-   73 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~-   73 (223)
                      .+++++++|+|+ ||+|..+++.|++.|. +++++|++.....+ .|         ...+.+...+.+......+.... 
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            356789999996 6999999999999997 89999886522110 11         11455556666666444333221 


Q ss_pred             -CCccchHHHHHHHHHhcCCccEEEeccC
Q psy16220         74 -NSVVDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                       .+.. .+ .++++   +...|+||.+..
T Consensus       107 ~~~~~-~~-~~~~~---~~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLD-DA-ELAAL---IAEHDLVLDCTD  130 (249)
T ss_dssp             CSCCC-HH-HHHHH---HHTSSEEEECCS
T ss_pred             eccCC-Hh-HHHHH---HhCCCEEEEeCC
Confidence             1111 11 12222   246899998865

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.49  E-value=0.00038  Score=48.17  Aligned_cols=32  Identities=31%  Similarity=0.553  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.++|+|+ |.+|..+++.|.+.|++|+++++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~   35 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI   35 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC
Confidence            467899987 99999999999999999999976

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.48  E-value=0.00043  Score=56.31  Aligned_cols=85  Identities=15%  Similarity=0.160  Sum_probs=51.0

Q ss_pred             CC-cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc--cchHHHHH
Q psy16220          8 DG-RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV--VDGDKIVQ   84 (223)
Q Consensus         8 ~~-~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   84 (223)
                      .| .++||+|++|++|...++.+...|++++++++         +..+.++..+.+++.+....++..+.  .+..+.+.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~---------~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~  236 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIR---------DRPNLDEVVASLKELGATQVITEDQNNSREFGPTIK  236 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEEC---------CCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEec---------CccccHHHHHHHHhcCCeEEEecCccchHHHHHHHH
Confidence            46 89999999999999998888888999888865         22221111222333344333333221  22222233


Q ss_pred             HHHH-hcCCccEEEeccC
Q psy16220         85 TALE-NFGRIDIVINNAG  101 (223)
Q Consensus        85 ~~~~-~~~~id~li~~ag  101 (223)
                      ++.. .-+.+|++|.++|
T Consensus       237 ~~t~~~~~g~Dvvid~~G  254 (364)
T 1gu7_A          237 EWIKQSGGEAKLALNCVG  254 (364)
T ss_dssp             HHHHHHTCCEEEEEESSC
T ss_pred             HHhhccCCCceEEEECCC
Confidence            3220 1247999999998

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.47  E-value=0.00063  Score=54.95  Aligned_cols=77  Identities=21%  Similarity=0.214  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .|.++||+|+ |++|...++.+...  |++|+++++         ++++.+..    ++.+....++..+   .++..++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~---------~~~~~~~~----~~lGa~~vi~~~~---~~~~~~~  232 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISR---------SKKHRDFA----LELGADYVSEMKD---AESLINK  232 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECS---------CHHHHHHH----HHHTCSEEECHHH---HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeC---------CHHHHHHH----HHhCCCEEecccc---chHHHHH
Confidence            6889999999 89999999988888  999998865         55444332    2233332222221   0222333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +.+ -.++|++|.++|.
T Consensus       233 ~~~-g~g~D~vid~~g~  248 (344)
T 2h6e_A          233 LTD-GLGASIAIDLVGT  248 (344)
T ss_dssp             HHT-TCCEEEEEESSCC
T ss_pred             hhc-CCCccEEEECCCC
Confidence            322 1279999999983

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.44  E-value=0.00046  Score=48.93  Aligned_cols=32  Identities=31%  Similarity=0.264  Sum_probs=28.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.++|+|+ |.+|+.+++.|.+.|++|+++++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~   34 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISN   34 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEEC
Confidence            467889986 99999999999999999999976

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.44  E-value=0.00066  Score=55.26  Aligned_cols=78  Identities=22%  Similarity=0.187  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+| +|++|...++.+...|++|+++++         ++++.+.    +++.+....+| .+..+....+.++.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~---------~~~~~~~----~~~lGa~~vi~-~~~~~~~~~v~~~~  253 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS---------SREKLDR----AFALGADHGIN-RLEEDWVERVYALT  253 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES---------CHHHHHH----HHHHTCSEEEE-TTTSCHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec---------CchhHHH----HHHcCCCEEEc-CCcccHHHHHHHHh
Confidence            478999999 899999999988889999999876         5444433    23334444445 33344433333332


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .. ..+|++|.++|
T Consensus       254 ~g-~g~D~vid~~g  266 (363)
T 3uog_A          254 GD-RGADHILEIAG  266 (363)
T ss_dssp             TT-CCEEEEEEETT
T ss_pred             CC-CCceEEEECCC
Confidence            21 27999999998

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.43  E-value=0.0012  Score=54.01  Aligned_cols=80  Identities=15%  Similarity=0.209  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||+| +|++|...++.+...| ++|+++++         ++++.+.    +++.+....++... .+.+.+.+++
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~~----~~~lGa~~vi~~~~-~~~~~~~~~v  259 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---------SPNRLKL----AEEIGADLTLNRRE-TSVEERRKAI  259 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---------CHHHHHH----HHHTTCSEEEETTT-SCHHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---------CHHHHHH----HHHcCCcEEEeccc-cCcchHHHHH
Confidence            478999999 8999999999888889 59999876         5444433    23334333333221 0122344444


Q ss_pred             HHhcC--CccEEEeccCC
Q psy16220         87 LENFG--RIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~--~id~li~~ag~  102 (223)
                      .+..+  .+|++|.++|.
T Consensus       260 ~~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          260 MDITHGRGADFILEATGD  277 (380)
T ss_dssp             HHHTTTSCEEEEEECSSC
T ss_pred             HHHhCCCCCcEEEECCCC
Confidence            44332  69999999983

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.41  E-value=0.0016  Score=53.80  Aligned_cols=77  Identities=17%  Similarity=0.318  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++.+.+.    +++.+....++..+. +   +.+.+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~~----~~~lGa~~vi~~~~~-~---~~~~i  274 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEP---------SEVRRNL----AKELGADHVIDPTKE-N---FVEAV  274 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CHHHHHH----HHHHTCSEEECTTTS-C---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHH----HHHcCCCEEEcCCCC-C---HHHHH
Confidence            4789999998 8999999988888999 8888865         4444432    233344444444333 2   23333


Q ss_pred             HHhc--CCccEEEeccCC
Q psy16220         87 LENF--GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~  102 (223)
                      .+..  ..+|++|.++|.
T Consensus       275 ~~~t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          275 LDYTNGLGAKLFLEATGV  292 (404)
T ss_dssp             HHHTTTCCCSEEEECSSC
T ss_pred             HHHhCCCCCCEEEECCCC
Confidence            3333  269999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.39  E-value=0.00028  Score=49.58  Aligned_cols=71  Identities=15%  Similarity=0.181  Sum_probs=48.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++++|+|+ |++|+.+++.|.+.|++|++.+|         +.++.+.+.+++.   .    +.....+.+..+     
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r---------~~~~~~~~a~~~~---~----~~~~~~~~~~~~-----   78 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGR---------NIDHVRAFAEKYE---Y----EYVLINDIDSLI-----   78 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEES---------CHHHHHHHHHHHT---C----EEEECSCHHHHH-----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC---------CHHHHHHHHHHhC---C----ceEeecCHHHHh-----
Confidence            789999996 99999999999999999888877         6666555544442   1    111222222222     


Q ss_pred             hcCCccEEEeccCCC
Q psy16220         89 NFGRIDIVINNAGIL  103 (223)
Q Consensus        89 ~~~~id~li~~ag~~  103 (223)
                        ...|++|.+.+..
T Consensus        79 --~~~Divi~at~~~   91 (144)
T 3oj0_A           79 --KNNDVIITATSSK   91 (144)
T ss_dssp             --HTCSEEEECSCCS
T ss_pred             --cCCCEEEEeCCCC
Confidence              2589999988753

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.39  E-value=0.0011  Score=51.63  Aligned_cols=32  Identities=28%  Similarity=0.349  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +|+++|+|+ ||.|++++..|++.|.+|.++.|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nR  149 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNR  149 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            789999997 89999999999999999999987

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.38  E-value=0.00096  Score=54.50  Aligned_cols=79  Identities=18%  Similarity=0.265  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   85 (223)
                      .|+++||+|+ |++|...++.+...|+ +|+++++         ++++.+.    +++.+....++..+ ..+....+.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~---------~~~~~~~----~~~lGa~~vi~~~~~~~~~~~~~~~  257 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDL---------NPDKFEK----AKVFGATDFVNPNDHSEPISQVLSK  257 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CGGGHHH----HHHTTCCEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC---------CHHHHHH----HHHhCCceEEeccccchhHHHHHHH
Confidence            4789999996 8999999998888999 7888865         4444433    22334443444443 1234444444


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       258 ~~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          258 MTN--GGVDFSLECVGN  272 (374)
T ss_dssp             HHT--SCBSEEEECSCC
T ss_pred             HhC--CCCCEEEECCCC
Confidence            332  479999999984

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.37  E-value=0.00019  Score=57.64  Aligned_cols=75  Identities=25%  Similarity=0.327  Sum_probs=46.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++||+|++|++|...++.+...|++|+++++         ++++.+..    ++.+....++..+.+  ...++++  .-
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~---------~~~~~~~~----~~lGa~~~i~~~~~~--~~~~~~~--~~  214 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTG---------KAAEHDYL----RVLGAKEVLAREDVM--AERIRPL--DK  214 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEES---------CTTCHHHH----HHTTCSEEEECC-----------C--CS
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHH----HHcCCcEEEecCCcH--HHHHHHh--cC
Confidence            7999999999999999998889999999876         33333322    233433333433221  1112221  11


Q ss_pred             CCccEEEeccCC
Q psy16220         91 GRIDIVINNAGI  102 (223)
Q Consensus        91 ~~id~li~~ag~  102 (223)
                      +.+|++|.++|.
T Consensus       215 ~~~d~vid~~g~  226 (328)
T 1xa0_A          215 QRWAAAVDPVGG  226 (328)
T ss_dssp             CCEEEEEECSTT
T ss_pred             CcccEEEECCcH
Confidence            469999999983

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.35  E-value=0.00073  Score=54.43  Aligned_cols=76  Identities=18%  Similarity=0.220  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|+ |++|...++.+...|++|+++++         +.++.+.    +++.+....++..+.+ .   .+.+.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~---------~~~~~~~----~~~lGa~~~i~~~~~~-~---~~~~~  227 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDI---------DDAKLNL----ARRLGAEVAVNARDTD-P---AAWLQ  227 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEES---------CHHHHHH----HHHTTCSEEEETTTSC-H---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeC---------CHHHHHH----HHHcCCCEEEeCCCcC-H---HHHHH
Confidence            4789999997 89999999988889999999876         4544432    3334544444444432 2   22333


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      +..+.+|++|.++|
T Consensus       228 ~~~g~~d~vid~~g  241 (340)
T 3s2e_A          228 KEIGGAHGVLVTAV  241 (340)
T ss_dssp             HHHSSEEEEEESSC
T ss_pred             HhCCCCCEEEEeCC
Confidence            33468999999987

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.35  E-value=0.00059  Score=55.76  Aligned_cols=77  Identities=21%  Similarity=0.266  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++.+.+ ..   ++.+.....+..+.+ .   .+.+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~-~a---~~lGa~~vi~~~~~~-~---~~~i  243 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTR---------QATKRR-LA---EEVGATATVDPSAGD-V---VEAI  243 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CHHHHH-HH---HHHTCSEEECTTSSC-H---HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHH-HH---HHcCCCEEECCCCcC-H---HHHH
Confidence            4789999998 8999999988888999 7888765         444433 22   333444444443322 2   2333


Q ss_pred             HH---h-cCCccEEEeccCC
Q psy16220         87 LE---N-FGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~---~-~~~id~li~~ag~  102 (223)
                      .+   . .+++|++|.++|.
T Consensus       244 ~~~~~~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          244 AGPVGLVPGGVDVVIECAGV  263 (370)
T ss_dssp             HSTTSSSTTCEEEEEECSCC
T ss_pred             HhhhhccCCCCCEEEECCCC
Confidence            32   1 2479999999883

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.32  E-value=0.003  Score=50.79  Aligned_cols=40  Identities=23%  Similarity=0.293  Sum_probs=33.2

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      |++.+..+.+++.|+|+ |.+|.++|..|+..|+ +|++.|+
T Consensus         1 ~~~~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~   41 (331)
T 1pzg_A            1 MAPALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDV   41 (331)
T ss_dssp             --CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CCcCcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEEC
Confidence            56566666678999998 9999999999999998 9999987

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.31  E-value=0.00079  Score=54.85  Aligned_cols=76  Identities=12%  Similarity=0.176  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAE-RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||+||+|++|...++.+.. .|++|+++++         ++++.+.    +++.+....++..+  +.   .+.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---------~~~~~~~----~~~lGad~vi~~~~--~~---~~~v  232 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---------RPETQEW----VKSLGAHHVIDHSK--PL---AAEV  232 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---------SHHHHHH----HHHTTCSEEECTTS--CH---HHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---------CHHHHHH----HHHcCCCEEEeCCC--CH---HHHH
Confidence            578999999999999988876665 5899999876         4444433    23344444444432  22   2333


Q ss_pred             HHhc-CCccEEEeccC
Q psy16220         87 LENF-GRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~-~~id~li~~ag  101 (223)
                      .+.. +.+|+++.++|
T Consensus       233 ~~~~~~g~Dvvid~~g  248 (363)
T 4dvj_A          233 AALGLGAPAFVFSTTH  248 (363)
T ss_dssp             HTTCSCCEEEEEECSC
T ss_pred             HHhcCCCceEEEECCC
Confidence            3322 47999999988

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.31  E-value=0.0009  Score=56.19  Aligned_cols=84  Identities=29%  Similarity=0.323  Sum_probs=54.0

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      |...+++++|+++|.|. |+.|.++|+.|+++|++|.+.|+..         .......+.+++.+..+.......    
T Consensus         1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~---------~~~~~~~~~L~~~gi~~~~g~~~~----   66 (451)
T 3lk7_A            1 MKTITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP---------FDENPTAQSLLEEGIKVVCGSHPL----   66 (451)
T ss_dssp             ---CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC---------GGGCHHHHHHHHTTCEEEESCCCG----
T ss_pred             CcchhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc---------ccCChHHHHHHhCCCEEEECCChH----
Confidence            55556788999999999 7899999999999999999998632         111223345655554433221111    


Q ss_pred             HHHHHHHHhcCC-ccEEEeccCCCCC
Q psy16220         81 KIVQTALENFGR-IDIVINNAGILRD  105 (223)
Q Consensus        81 ~~~~~~~~~~~~-id~li~~ag~~~~  105 (223)
                             +.+.. .|.||.+.|+...
T Consensus        67 -------~~~~~~~d~vv~spgi~~~   85 (451)
T 3lk7_A           67 -------ELLDEDFCYMIKNPGIPYN   85 (451)
T ss_dssp             -------GGGGSCEEEEEECTTSCTT
T ss_pred             -------HhhcCCCCEEEECCcCCCC
Confidence                   01123 8999999987543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.30  E-value=0.0011  Score=54.13  Aligned_cols=79  Identities=18%  Similarity=0.256  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   85 (223)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++         ++++.+..    ++.+....+|..+ ..+..+.+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~---------~~~~~~~~----~~lGa~~vi~~~~~~~~~~~~~~~  256 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDI---------NKDKFAKA----KEVGATECVNPQDYKKPIQEVLTE  256 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CGGGHHHH----HHTTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHHH----HHhCCceEecccccchhHHHHHHH
Confidence            4789999995 8999999998888999 7888865         44444322    2334433344433 1233333333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       257 ~~~--~g~D~vid~~g~  271 (374)
T 2jhf_A          257 MSN--GGVDFSFEVIGR  271 (374)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             HhC--CCCcEEEECCCC
Confidence            322  479999999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.29  E-value=0.00024  Score=56.83  Aligned_cols=73  Identities=21%  Similarity=0.290  Sum_probs=47.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      |+ +||+|++|++|...++.+...|++|+++++         ++++.+..    ++.+....++..+...    .+++  
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~---------~~~~~~~~----~~lGa~~vi~~~~~~~----~~~~--  207 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSG---------RESTHGYL----KSLGANRILSRDEFAE----SRPL--  207 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEES---------CGGGHHHH----HHHTCSEEEEGGGSSC----CCSS--
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHH----HhcCCCEEEecCCHHH----HHhh--
Confidence            45 999999999999999998899999999876         44444332    2234443333333221    1111  


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                      ..+++|+++.++|
T Consensus       208 ~~~~~d~v~d~~g  220 (324)
T 3nx4_A          208 EKQLWAGAIDTVG  220 (324)
T ss_dssp             CCCCEEEEEESSC
T ss_pred             cCCCccEEEECCC
Confidence            1147999999887

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.28  E-value=0.0015  Score=53.45  Aligned_cols=79  Identities=18%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   85 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++++.+.    +++.+....++..+ ..+..+.+.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~~----a~~lGa~~vi~~~~~~~~~~~~v~~  260 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDI---------NGEKFPK----AKALGATDCLNPRELDKPVQDVITE  260 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CGGGHHH----HHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHH----HHHhCCcEEEccccccchHHHHHHH
Confidence            4789999996 8999999988888899 7888865         4444432    23334443444433 1233333333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       261 ~~~--~g~Dvvid~~G~  275 (376)
T 1e3i_A          261 LTA--GGVDYSLDCAGT  275 (376)
T ss_dssp             HHT--SCBSEEEESSCC
T ss_pred             HhC--CCccEEEECCCC
Confidence            322  479999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.26  E-value=0.0012  Score=53.81  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   85 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++++.+..    ++.+....++..+. .+..+.+.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~---------~~~~~~~~----~~lGa~~vi~~~~~~~~~~~~v~~  255 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDI---------NKDKFARA----KEFGATECINPQDFSKPIQEVLIE  255 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS---------CGGGHHHH----HHHTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHHH----HHcCCceEeccccccccHHHHHHH
Confidence            4789999996 8999999998888899 7888865         44444332    22344333444331 233333333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       256 ~~~--~g~D~vid~~g~  270 (373)
T 2fzw_A          256 MTD--GGVDYSFECIGN  270 (373)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             HhC--CCCCEEEECCCc
Confidence            322  479999999984

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.26  E-value=0.00083  Score=54.99  Aligned_cols=79  Identities=19%  Similarity=0.203  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   85 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++++.+.    .++.+....++..+ ..+..+.+.+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~---------~~~~~~~----a~~lGa~~vi~~~~~~~~~~~~i~~  258 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDI---------DSKKYET----AKKFGVNEFVNPKDHDKPIQEVIVD  258 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECS---------CTTHHHH----HHTTTCCEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------CHHHHHH----HHHcCCcEEEccccCchhHHHHHHH
Confidence            4789999998 9999999988888899 7998876         4444432    23334444444432 2333333333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       259 ~~~--gg~D~vid~~g~  273 (378)
T 3uko_A          259 LTD--GGVDYSFECIGN  273 (378)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             hcC--CCCCEEEECCCC
Confidence            322  489999999983

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.25  E-value=0.00021  Score=56.17  Aligned_cols=36  Identities=22%  Similarity=0.336  Sum_probs=32.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nR  154 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTR  154 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEES
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeC
Confidence            4567999999998 6999999999999998 8999977

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.24  E-value=0.0014  Score=53.21  Aligned_cols=77  Identities=21%  Similarity=0.255  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+... |++|+++++         ++++.+.    +++.+....++..+.  ..+.+.++
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~---------~~~~~~~----~~~lGa~~vi~~~~~--~~~~v~~~  249 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV---------KEEKLKL----AERLGADHVVDARRD--PVKQVMEL  249 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES---------SHHHHHH----HHHTTCSEEEETTSC--HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---------CHHHHHH----HHHhCCCEEEeccch--HHHHHHHH
Confidence            4789999999 89999999888888 999999876         4444433    233344444444332  22222222


Q ss_pred             HHhcC-CccEEEeccCC
Q psy16220         87 LENFG-RIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~-~id~li~~ag~  102 (223)
                      .  .+ .+|++|.++|.
T Consensus       250 ~--~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          250 T--RGRGVNVAMDFVGS  264 (359)
T ss_dssp             T--TTCCEEEEEESSCC
T ss_pred             h--CCCCCcEEEECCCC
Confidence            1  13 69999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.24  E-value=0.0028  Score=50.85  Aligned_cols=125  Identities=14%  Similarity=0.136  Sum_probs=64.2

Q ss_pred             CCCccccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccc
Q psy16220          1 MPEQVRFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVD   78 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (223)
                      |.+-.+.+++++.|+|+ |.+|.+++..|+..|.  .++++|+         ++.+.+....++..... ......-..+
T Consensus         1 ~~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~---------~~~k~~g~a~DL~~~~~-~~~~~~i~~~   69 (326)
T 3vku_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI---------FKDKTKGDAIDLEDALP-FTSPKKIYSA   69 (326)
T ss_dssp             ------CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------CHHHHHHHHHHHHTTGG-GSCCCEEEEC
T ss_pred             CcccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC---------ChHHHHHHHhhHhhhhh-hcCCcEEEEC
Confidence            44445667789999996 9999999999999987  8999987         55555544445543211 1000000000


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                             -.+.+...|++|.+||... ++  ..   .-.+.++.|+.-...+.+.+    .+. +.+.++++|-..
T Consensus        70 -------~~~a~~~aDiVvi~ag~~~-kp--G~---tR~dL~~~N~~I~~~i~~~i----~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           70 -------EYSDAKDADLVVITAGAPQ-KP--GE---TRLDLVNKNLKILKSIVDPI----VDSGFNGIFLVAANPV  128 (326)
T ss_dssp             -------CGGGGTTCSEEEECCCCC----------------------CHHHHHHHH----HTTTCCSEEEECSSSH
T ss_pred             -------cHHHhcCCCEEEECCCCCC-CC--Cc---hHHHHHHHHHHHHHHHHHHH----HhcCCceEEEEccCch
Confidence                   0234568999999999632 11  11   23345566665555555544    443 346666666533

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.24  E-value=9.2e-05  Score=58.12  Aligned_cols=37  Identities=16%  Similarity=0.176  Sum_probs=32.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLG   42 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~   42 (223)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~  150 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRT  150 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            3567899999997 7999999999999999 89999873

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.24  E-value=0.00072  Score=54.98  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=49.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+|+ |++|...++.+...|++|+++++         ++.+.+..    ++.+....++..+..+   ..+.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~---------~~~~~~~~----~~lGa~~v~~~~~~~~---~~~~~~  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISR---------SSRKREDA----MKMGADHYIATLEEGD---WGEKYF  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES---------SSTTHHHH----HHHTCSEEEEGGGTSC---HHHHSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC---------CHHHHHHH----HHcCCCEEEcCcCchH---HHHHhh
Confidence            4789999999 99999999988889999999876         33333322    2234333333332211   122221


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                         +++|++|.++|.
T Consensus       242 ---~~~D~vid~~g~  253 (360)
T 1piw_A          242 ---DTFDLIVVCASS  253 (360)
T ss_dssp             ---SCEEEEEECCSC
T ss_pred             ---cCCCEEEECCCC
Confidence               589999999985

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.23  E-value=0.00095  Score=54.19  Aligned_cols=74  Identities=20%  Similarity=0.318  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCCCchHHHH-HHHH-HHcCCe-EEEEccCCCCCCCCCChh---hhhHHHHHHHHhCCccccccCCccchHH
Q psy16220          8 DGRVAIVTGAGAGLGRSY-ALLL-AERGAS-VVVNDLGGQRDGDGKSSK---AADTVVAEIRSKGGKAVPNYNSVVDGDK   81 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~-a~~l-~~~G~~-vv~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
                      ++.++||+|+ |++|... ++.+ ...|++ |+.+++         +++   +.+.    +++.+.... +..+ .+..+
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~---------~~~~~~~~~~----~~~lGa~~v-~~~~-~~~~~  235 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGR---------RDRPDPTIDI----IEELDATYV-DSRQ-TPVED  235 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEEC---------CCSSCHHHHH----HHHTTCEEE-ETTT-SCGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeC---------CcccHHHHHH----HHHcCCccc-CCCc-cCHHH
Confidence            3489999999 9999999 7766 667997 999876         332   3322    223343333 3332 23333


Q ss_pred             HHHHHHHhcCCccEEEeccC
Q psy16220         82 IVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag  101 (223)
                       +.++   .+.+|++|.++|
T Consensus       236 -i~~~---~gg~Dvvid~~g  251 (357)
T 2b5w_A          236 -VPDV---YEQMDFIYEATG  251 (357)
T ss_dssp             -HHHH---SCCEEEEEECSC
T ss_pred             -HHHh---CCCCCEEEECCC
Confidence             4444   247999999998

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.23  E-value=0.0005  Score=56.08  Aligned_cols=76  Identities=14%  Similarity=0.170  Sum_probs=47.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +.-+.++|+|.|+ |++|+.+|+.|++ .++|.+.++         +...++..    ......+..|+.|.++..+   
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~---------~~~~~~~~----~~~~~~~~~d~~d~~~l~~---   73 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDV---------NNENLEKV----KEFATPLKVDASNFDKLVE---   73 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEES---------CHHHHHHH----TTTSEEEECCTTCHHHHHH---
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEc---------CHHHHHHH----hccCCcEEEecCCHHHHHH---
Confidence            4445568999998 9999999998865 578999887         55444432    2222233445544332222   


Q ss_pred             HHHHhcCCccEEEeccCC
Q psy16220         85 TALENFGRIDIVINNAGI  102 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~  102 (223)
                      .    ..+.|+||++++.
T Consensus        74 ~----~~~~DvVi~~~p~   87 (365)
T 3abi_A           74 V----MKEFELVIGALPG   87 (365)
T ss_dssp             H----HTTCSEEEECCCG
T ss_pred             H----HhCCCEEEEecCC
Confidence            2    2368999999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.21  E-value=0.0013  Score=53.84  Aligned_cols=80  Identities=23%  Similarity=0.237  Sum_probs=52.5

Q ss_pred             CCcEEEEEc-CCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTG-AGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItG-a~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||.| |++++|...++.+...|++|+++++         ++++.+.    +++.+....++..+. +..+.+.++
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---------~~~~~~~----~~~lGa~~~~~~~~~-~~~~~v~~~  235 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---------KQEQADL----LKAQGAVHVCNAASP-TFMQDLTEA  235 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---------SHHHHHH----HHHTTCSCEEETTST-THHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHH----HHhCCCcEEEeCCCh-HHHHHHHHH
Confidence            467899997 8999999999988889999999876         5544433    233444444444332 222222222


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      ... ..+|++|.++|.
T Consensus       236 t~~-~g~d~v~d~~g~  250 (379)
T 3iup_A          236 LVS-TGATIAFDATGG  250 (379)
T ss_dssp             HHH-HCCCEEEESCEE
T ss_pred             hcC-CCceEEEECCCc
Confidence            221 269999999984

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.20  E-value=0.0017  Score=53.80  Aligned_cols=34  Identities=29%  Similarity=0.574  Sum_probs=31.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      +.|++++|+|+ |++|+.+++.|...|+ +|++++|
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r  199 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR  199 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeC
Confidence            67899999998 9999999999999999 8999877

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.19  E-value=0.0017  Score=53.06  Aligned_cols=79  Identities=18%  Similarity=0.173  Sum_probs=50.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   85 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++.+.+.    +++.+....++..+. .+..+.+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~~----a~~lGa~~vi~~~~~~~~~~~~i~~  256 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGT---------HKDKFPK----AIELGATECLNPKDYDKPIYEVICE  256 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS---------CGGGHHH----HHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC---------CHHHHHH----HHHcCCcEEEecccccchHHHHHHH
Confidence            4789999996 8999999988888899 7888865         4444432    223344333443331 233333333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      +..  +.+|++|.++|.
T Consensus       257 ~t~--gg~Dvvid~~g~  271 (373)
T 1p0f_A          257 KTN--GGVDYAVECAGR  271 (373)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             HhC--CCCCEEEECCCC
Confidence            222  479999999984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.18  E-value=0.0028  Score=49.69  Aligned_cols=31  Identities=29%  Similarity=0.314  Sum_probs=27.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++.|+|+ |.+|.++|..|++.|++|++.++
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~   35 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDI   35 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeC
Confidence            46777876 78999999999999999999987

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.18  E-value=0.00085  Score=54.03  Aligned_cols=119  Identities=14%  Similarity=0.149  Sum_probs=68.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--e-----EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA--S-----VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~--~-----vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      ++++||||+|.||.+++..|+..|.  .     ++++|++       ......+....++.........+....   .  
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~-------~~~~~~~g~a~DL~~~~~~~~~~~~~~---~--   71 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT-------PMMGVLDGVLMELQDCALPLLKDVIAT---D--   71 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG-------GGHHHHHHHHHHHHHTCCTTEEEEEEE---S--
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCC-------CccccchhhHhhhHhhhhcccCCEEEc---C--
Confidence            4799999999999999999998775  4     8888761       012234444444543211111111111   1  


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CC-cEEEEecC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YG-RLVMTASN  152 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g-~iv~vsS~  152 (223)
                        ...+.+...|++|++||... ++  ..+   ..+.++.|+.....+.+.+    .+.. .+ +++++|-.
T Consensus        72 --~~~~~~~daDvVvitAg~pr-kp--G~t---R~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           72 --KEEIAFKDLDVAILVGSMPR-RD--GME---RKDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             --CHHHHTTTCSEEEECCSCCC-CT--TCC---TTTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSS
T ss_pred             --CcHHHhCCCCEEEEeCCCCC-CC--CCC---HHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCCc
Confidence              12334568999999998532 11  122   2345666776666665554    4443 35 46666653

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.16  E-value=0.0061  Score=48.61  Aligned_cols=118  Identities=16%  Similarity=0.228  Sum_probs=67.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+||+|.+|..++..|+..|  ..++++|+         +.  .+....++.....  ..++.......    ...+
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di---------~~--~~~~a~dL~~~~~--~~~l~~~~~t~----d~~~   64 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI---------AH--TPGVAADLSHIET--RATVKGYLGPE----QLPD   64 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES---------SS--HHHHHHHHTTSSS--SCEEEEEESGG----GHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC---------Cc--cHHHHHHHhccCc--CceEEEecCCC----CHHH
Confidence            68999999999999999999888  68999987         22  1222223322111  00111100000    1222


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                      .+...|++|+++|.....   ..+..   +.+..|+.....+.+.+..+   .+.+.||++|-...
T Consensus        65 a~~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~  121 (314)
T 1mld_A           65 CLKGCDVVVIPAGVPRKP---GMTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNPVN  121 (314)
T ss_dssp             HHTTCSEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred             HhCCCCEEEECCCcCCCC---CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence            345799999999964321   12222   23566666666666655333   23467888765433

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.16  E-value=0.00026  Score=57.53  Aligned_cols=34  Identities=18%  Similarity=0.252  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|.++||+|++|++|...++.+...|++++++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~  200 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR  200 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEec
Confidence            4789999999999999998888888999887764

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.14  E-value=0.0027  Score=51.47  Aligned_cols=79  Identities=24%  Similarity=0.334  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++.+.+.    +++.+....++..+ .+.+...+++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~~----a~~lGa~~vi~~~~-~~~~~~~~~i  235 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDL---------SATRLSK----AKEIGADLVLQISK-ESPQEIARKV  235 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES---------CHHHHHH----HHHTTCSEEEECSS-CCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---------CHHHHHH----HHHhCCCEEEcCcc-cccchHHHHH
Confidence            4789999996 8999999988888899 8888875         4444332    23334433333331 1122333444


Q ss_pred             HHhc-CCccEEEeccC
Q psy16220         87 LENF-GRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~-~~id~li~~ag  101 (223)
                      .+.. +.+|++|.++|
T Consensus       236 ~~~~~~g~D~vid~~g  251 (356)
T 1pl8_A          236 EGQLGCKPEVTIECTG  251 (356)
T ss_dssp             HHHHTSCCSEEEECSC
T ss_pred             HHHhCCCCCEEEECCC
Confidence            3322 57999999998

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.11  E-value=0.0012  Score=52.82  Aligned_cols=73  Identities=21%  Similarity=0.343  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+||+|++|...++.+...|++|+.+++          ..+. +   .+++.+....++..+.+.       +.
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~----------~~~~-~---~~~~lGa~~~i~~~~~~~-------~~  210 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS----------KRNH-A---FLKALGAEQCINYHEEDF-------LL  210 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC----------HHHH-H---HHHHHTCSEEEETTTSCH-------HH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec----------cchH-H---HHHHcCCCEEEeCCCcch-------hh
Confidence            4789999999999999999999999999988753          2222 2   233344443344333321       12


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      +....+|+++.+.|
T Consensus       211 ~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          211 AISTPVDAVIDLVG  224 (321)
T ss_dssp             HCCSCEEEEEESSC
T ss_pred             hhccCCCEEEECCC
Confidence            22357999999988

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.09  E-value=0.019  Score=46.00  Aligned_cols=120  Identities=19%  Similarity=0.158  Sum_probs=70.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +.+++.|+|+ |.+|.+++..|+..|.  .++++|+         ++.+.+....++............-..+.      
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~---------~~~k~~g~a~DL~~~~~~~~~~v~i~~~~------   67 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDV---------NKEKAMGDVMDLNHGKAFAPQPVKTSYGT------   67 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------CHHHHHHHHHHHHHTGGGSSSCCEEEEEC------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEec---------chHHHHHHHHHHHhccccccCCeEEEeCc------
Confidence            3468999996 9999999999999987  8999987         66655554445544211100010000000      


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                       .+.+...|++|.++|... ++  ..+.   .+.++.|+.-...+.+.+..+   .+.+.++++|-..
T Consensus        68 -~~a~~~aDvVvi~ag~p~-kp--G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPv  125 (326)
T 3pqe_A           68 -YEDCKDADIVCICAGANQ-KP--GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPV  125 (326)
T ss_dssp             -GGGGTTCSEEEECCSCCC-CT--TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             -HHHhCCCCEEEEecccCC-CC--CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChH
Confidence             134567999999998532 11  2233   344666666555555554322   2346666666543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.09  E-value=0.003  Score=48.70  Aligned_cols=91  Identities=18%  Similarity=0.284  Sum_probs=53.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-CCC---------hhhhhHHHHHHHHhCCccccccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-GKS---------SKAADTVVAEIRSKGGKAVPNYN   74 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.....+ .|.         ..+.+...+.+.+....+.....
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            356789999998 5799999999999997 78888775432211 111         24555666666665444332221


Q ss_pred             Cc-cchHHHHHHHHHhcCCccEEEeccC
Q psy16220         75 SV-VDGDKIVQTALENFGRIDIVINNAG  101 (223)
Q Consensus        75 ~~-~~~~~~~~~~~~~~~~id~li~~ag  101 (223)
                      +. .+.+ .++++.+   ..|+||.+..
T Consensus       104 ~~~~~~~-~~~~~~~---~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTGE-ALKDAVA---RADVVLDCTD  127 (251)
T ss_dssp             CSCCCHH-HHHHHHH---HCSEEEECCS
T ss_pred             eccCCHH-HHHHHHh---cCCEEEECCC
Confidence            11 1111 1222222   4688887654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.08  E-value=0.00098  Score=47.34  Aligned_cols=35  Identities=31%  Similarity=0.400  Sum_probs=31.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +..++.++|+|+ |.+|..+++.|.+.|++|+++++
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~   50 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDK   50 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEEC
Confidence            456789999996 99999999999999999999987

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.07  E-value=0.002  Score=52.64  Aligned_cols=78  Identities=15%  Similarity=0.155  Sum_probs=51.3

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      -.|.++||+|+++++|...++.+...|++|+.+.          +.++.+    .+++.+....++..+. +   ..+.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----------~~~~~~----~~~~lGa~~vi~~~~~-~---~~~~v  224 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----------SPHNFD----LAKSRGAEEVFDYRAP-N---LAQTI  224 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----------CGGGHH----HHHHTTCSEEEETTST-T---HHHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----------CHHHHH----HHHHcCCcEEEECCCc-h---HHHHH
Confidence            4578999999999999999999989999988774          222222    2233444434444332 2   22333


Q ss_pred             HHhc-CCccEEEeccCC
Q psy16220         87 LENF-GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~-~~id~li~~ag~  102 (223)
                      .+.. +++|+++.++|.
T Consensus       225 ~~~t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          225 RTYTKNNLRYALDCITN  241 (371)
T ss_dssp             HHHTTTCCCEEEESSCS
T ss_pred             HHHccCCccEEEECCCc
Confidence            3322 469999999983

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.00  E-value=0.016  Score=46.13  Aligned_cols=117  Identities=21%  Similarity=0.202  Sum_probs=67.6

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCC--hhhhhHHHHHHHHhC----CccccccCCccch
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKS--SKAADTVVAEIRSKG----GKAVPNYNSVVDG   79 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   79 (223)
                      ++.+++.|+|+ |.+|.++|..|+..|. .|++.|+         +  +...+....++....    .......++  + 
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~---------~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d-   72 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDI---------PQLENPTKGKALDMLEASPVQGFDANIIGTS--D-   72 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECC---------GGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C-
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEec---------cchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C-
Confidence            45678999997 9999999999999999 9999987         4  223322222222110    000000000  0 


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN  152 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  152 (223)
                             .+.+...|++|.++|.... +  ..+.   .+.++.|+.-...+.+.+..+   .+.+.++++|-.
T Consensus        73 -------~~a~~~aDvVIiaag~p~k-p--g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP  129 (315)
T 3tl2_A           73 -------YADTADSDVVVITAGIARK-P--GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP  129 (315)
T ss_dssp             -------GGGGTTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             -------HHHhCCCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence                   1345689999999986322 1  2333   345666665555555554332   234667776653

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.0017  Score=53.03  Aligned_cols=74  Identities=23%  Similarity=0.309  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+|+ |++|...++.+...|++|+++++         ++++.+..    ++.+....++..+.    ...+++ 
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~---------~~~~~~~a----~~lGa~~vi~~~~~----~~~~~~-  254 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT---------SEAKREAA----KALGADEVVNSRNA----DEMAAH-  254 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------SGGGHHHH----HHHTCSEEEETTCH----HHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC---------CHHHHHHH----HHcCCcEEeccccH----HHHHHh-
Confidence            4789999998 89999999988888999988876         44444332    22343333333322    222222 


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                        .+.+|++|.++|.
T Consensus       255 --~~g~Dvvid~~g~  267 (369)
T 1uuf_A          255 --LKSFDFILNTVAA  267 (369)
T ss_dssp             --TTCEEEEEECCSS
T ss_pred             --hcCCCEEEECCCC
Confidence              1579999999984

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.97  E-value=0.0002  Score=57.55  Aligned_cols=33  Identities=33%  Similarity=0.474  Sum_probs=29.8

Q ss_pred             Cc-EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          9 GR-VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         9 ~~-~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      |+ ++||+|++|++|...++.+...|++|+++++
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~  183 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG  183 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEES
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            44 7999999999999999988889999999876

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.93  E-value=0.0021  Score=52.21  Aligned_cols=75  Identities=19%  Similarity=0.184  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+|+ |++|...++.+...|++|+++++         ++++.+...+   +.+.....+..+   .    +.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~---------~~~~~~~~~~---~lGa~~vi~~~~---~----~~~~  239 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISS---------SNKKREEALQ---DLGADDYVIGSD---Q----AKMS  239 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES---------STTHHHHHHT---TSCCSCEEETTC---H----HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeC---------ChHHHHHHHH---HcCCceeecccc---H----HHHH
Confidence            5789999995 99999999988888999999876         3333322211   233333333322   1    1222


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                      +..+.+|++|.++|.
T Consensus       240 ~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          240 ELADSLDYVIDTVPV  254 (357)
T ss_dssp             HSTTTEEEEEECCCS
T ss_pred             HhcCCCCEEEECCCC
Confidence            223579999999984

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.92  E-value=0.018  Score=46.42  Aligned_cols=121  Identities=18%  Similarity=0.173  Sum_probs=66.0

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccch
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDG   79 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (223)
                      ++.-+|.|+||+|+||.+++-.|+....       .++++|.+       .....++-..-++..-.........-..+ 
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~-------~~~~~~~Gva~DL~~~~~~~~~~~~~~~~-   93 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE-------PALKALAGVEAELEDCAFPLLDKVVVTAD-   93 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG-------GGHHHHHHHHHHHHHTTCTTEEEEEEESC-
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC-------CccccchhhhhhhhhcCccCCCcEEEcCC-
Confidence            3445899999999999999999987543       68888751       11223333333443321111111111111 


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCc-EEEEec
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGR-LVMTAS  151 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~-iv~vsS  151 (223)
                            ..+.+..-|++|..||... +  ...+.++   .++.|..=    ++.+.+.+.+. .++. |+.+|-
T Consensus        94 ------~~~a~~~advVvi~aG~pr-k--pGmtR~D---Ll~~Na~I----~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           94 ------PRVAFDGVAIAIMCGAFPR-K--AGMERKD---LLEMNARI----FKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             ------HHHHTTTCSEEEECCCCCC-C--TTCCHHH---HHHHHHHH----HHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ------hHHHhCCCCEEEECCCCCC-C--CCCCHHH---HHHHhHHH----HHHHHHHHHhhccCceEEEEeCC
Confidence                  1234678999999999632 2  2345554   45666654    44444444543 2344 444443

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.90  E-value=0.0023  Score=44.55  Aligned_cols=72  Identities=22%  Similarity=0.244  Sum_probs=46.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc-ccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA-VPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   88 (223)
                      +.++|.|+ |.+|..+++.|.+.|+.|+++++         +++..+.    +...+..+ ..|..+.+    .+++.  
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~---------~~~~~~~----~~~~g~~~i~gd~~~~~----~l~~a--   67 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIET---------SRTRVDE----LRERGVRAVLGNAANEE----IMQLA--   67 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEES---------CHHHHHH----HHHTTCEEEESCTTSHH----HHHHT--
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEEC---------CHHHHHH----HHHcCCCEEECCCCCHH----HHHhc--
Confidence            46777887 78999999999999999999987         5555443    33333322 22443332    12221  


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                      ...+.|.+|.+.+
T Consensus        68 ~i~~ad~vi~~~~   80 (140)
T 3fwz_A           68 HLECAKWLILTIP   80 (140)
T ss_dssp             TGGGCSEEEECCS
T ss_pred             CcccCCEEEEECC
Confidence            2246888888776

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.86  E-value=0.0029  Score=51.09  Aligned_cols=69  Identities=22%  Similarity=0.207  Sum_probs=46.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+|+ |++|...++.+...|++|+++++         ++++.+.    +++.+....+  .+.+....      
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~---------~~~~~~~----~~~lGa~~v~--~~~~~~~~------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFAR---------NEHKKQD----ALSMGVKHFY--TDPKQCKE------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECS---------SSTTHHH----HHHTTCSEEE--SSGGGCCS------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeC---------CHHHHHH----HHhcCCCeec--CCHHHHhc------
Confidence            4789999997 89999999988889999999876         4444332    2233333222  22221111      


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                          .+|++|.++|.
T Consensus       234 ----~~D~vid~~g~  244 (348)
T 3two_A          234 ----ELDFIISTIPT  244 (348)
T ss_dssp             ----CEEEEEECCCS
T ss_pred             ----CCCEEEECCCc
Confidence                79999999884

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.83  E-value=0.0024  Score=46.58  Aligned_cols=77  Identities=17%  Similarity=0.186  Sum_probs=49.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc-ccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA-VPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   83 (223)
                      ++.++.++|+| .|.+|..+++.|.+. |++|+++++         +.+..+.    +.+.+... ..|..+.   + .+
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~---------~~~~~~~----~~~~g~~~~~gd~~~~---~-~l   97 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEI---------REEAAQQ----HRSEGRNVISGDATDP---D-FW   97 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEES---------CHHHHHH----HHHTTCCEEECCTTCH---H-HH
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEEC---------CHHHHHH----HHHCCCCEEEcCCCCH---H-HH
Confidence            45577889998 489999999999999 999999987         5544433    33333322 2233332   1 11


Q ss_pred             HHHHHhcCCccEEEeccC
Q psy16220         84 QTALENFGRIDIVINNAG  101 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag  101 (223)
                      .+. ......|.+|.+.+
T Consensus        98 ~~~-~~~~~ad~vi~~~~  114 (183)
T 3c85_A           98 ERI-LDTGHVKLVLLAMP  114 (183)
T ss_dssp             HTB-CSCCCCCEEEECCS
T ss_pred             Hhc-cCCCCCCEEEEeCC
Confidence            111 01357899998776

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.74  E-value=0.032  Score=44.01  Aligned_cols=115  Identities=11%  Similarity=0.127  Sum_probs=64.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++.|+|+ |.+|.+++..|+..|.  .+++.|+         +++..+...-++....  ......+.-..+        
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~---------~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d--------   63 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI---------AEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--------   63 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS---------SHHHHHHHHHHHHHHHHTTTCCCEEEEESC--------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC---------ChHHHHHHHHHHHhhhhhcCCCCEEEEeCC--------
Confidence            6889999 9999999999999998  8999987         5554432222222111  000000100001        


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                      .+.+..-|++|.++|....   ...+..+   .++.|+.-    ++.+.+.+.+. +.+.++++|-..
T Consensus        64 ~~a~~~aDiVViaag~~~k---pG~~R~d---l~~~N~~i----~~~i~~~i~~~~p~a~iivvsNPv  121 (294)
T 1oju_A           64 YSLLKGSEIIVVTAGLARK---PGMTRLD---LAHKNAGI----IKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             GGGGTTCSEEEECCCCCCC---SSCCHHH---HHHHHHHH----HHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             HHHhCCCCEEEECCCCCCC---CCCcHHH---HHHHHHHH----HHHHHHHHHhhCCCeEEEEeCCcc
Confidence            2234578999999986321   1233333   35556544    44444444544 345666666533

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.73  E-value=0.0032  Score=46.97  Aligned_cols=31  Identities=32%  Similarity=0.445  Sum_probs=29.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++|+||+|.+|.++++.|++.|++|++++|
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r   32 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSR   32 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            5889999999999999999999999999987

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.73  E-value=0.011  Score=48.30  Aligned_cols=34  Identities=21%  Similarity=0.135  Sum_probs=30.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.+++++|+|+ |.+|..+++.+...|++|+++++
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~  215 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDV  215 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeC
Confidence            36789999999 69999999999999999999987

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.69  E-value=0.0039  Score=50.43  Aligned_cols=77  Identities=21%  Similarity=0.230  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++++.+. .   ++.+....++..+.    ...+++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~---------~~~~~~~-~---~~lGa~~vi~~~~~----~~~~~v  227 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGS---------RKHCCDI-A---LEYGATDIINYKNG----DIVEQI  227 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECC---------CHHHHHH-H---HHHTCCEEECGGGS----CHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECC---------CHHHHHH-H---HHhCCceEEcCCCc----CHHHHH
Confidence            4789999985 8999999988888899 7988865         4444332 2   33344434443332    223334


Q ss_pred             HHhcC--CccEEEeccCC
Q psy16220         87 LENFG--RIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~--~id~li~~ag~  102 (223)
                      .+..+  .+|+++.++|.
T Consensus       228 ~~~t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          228 LKATDGKGVDKVVIAGGD  245 (352)
T ss_dssp             HHHTTTCCEEEEEECSSC
T ss_pred             HHHcCCCCCCEEEECCCC
Confidence            33332  69999999884

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.68  E-value=0.038  Score=44.34  Aligned_cols=121  Identities=10%  Similarity=0.075  Sum_probs=70.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ...+++.|+|+ |.+|.+++..|+.+|.  .++++|+         +....+....++..... .. ..........   
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di---------~~~~~~g~a~DL~~~~~-~~-~~~~i~~~~d---   81 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDV---------IEDKLKGEMMDLQHGSL-FL-KTPKIVSSKD---   81 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS---------CHHHHHHHHHHHHHTGG-GC-SCCEEEECSS---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeC---------ChHHHHHHHHhhhhhhh-cc-CCCeEEEcCC---
Confidence            45678999997 8999999999999987  7999987         55555555555543210 00 0000000000   


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                        .+.+...|++|.+||....   ...+..   +.++.|+.-...+.+.+..+   .+.+.++++|-..
T Consensus        82 --~~~~~~aDiVvi~aG~~~k---pG~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv  139 (331)
T 4aj2_A           82 --YSVTANSKLVIITAGARQQ---EGESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPV  139 (331)
T ss_dssp             --GGGGTTEEEEEECCSCCCC---TTCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             --HHHhCCCCEEEEccCCCCC---CCccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChH
Confidence              1235679999999986422   223333   34555655444555544332   3346777776543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.67  E-value=0.0063  Score=49.56  Aligned_cols=77  Identities=21%  Similarity=0.266  Sum_probs=49.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||+|+ |++|...++.+...|+ +|+++++         ++.+.+..    ++.+....++..+. +.   .+++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~---------~~~~~~~a----~~lGa~~vi~~~~~-~~---~~~~  251 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDI---------VESRLELA----KQLGATHVINSKTQ-DP---VAAI  251 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEES---------CHHHHHHH----HHHTCSEEEETTTS-CH---HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC---------CHHHHHHH----HHcCCCEEecCCcc-CH---HHHH
Confidence            4789999995 8999999988888899 6888765         44444332    23344333343332 22   2233


Q ss_pred             HHhc-CCccEEEeccCC
Q psy16220         87 LENF-GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~-~~id~li~~ag~  102 (223)
                      .+.. +.+|++|.++|.
T Consensus       252 ~~~~~gg~D~vid~~g~  268 (371)
T 1f8f_A          252 KEITDGGVNFALESTGS  268 (371)
T ss_dssp             HHHTTSCEEEEEECSCC
T ss_pred             HHhcCCCCcEEEECCCC
Confidence            3322 379999999983

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.66  E-value=0.028  Score=44.95  Aligned_cols=117  Identities=19%  Similarity=0.178  Sum_probs=64.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHh----CCccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GGKAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   81 (223)
                      ++.+++.|+|+ |.+|.+++..|+..|. .+++.|+         ++++.+....++...    ........++  +   
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di---------~~~~~~g~~~dl~~~~~~~~~~~~v~~t~--d---   69 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDI---------AEGTPQGKGLDIAESSPVDGFDAKFTGAN--D---   69 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS---------SSSHHHHHHHHHHHHHHHHTCCCCEEEES--S---
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeC---------CchhHHHHHHHHhchhhhcCCCCEEEEeC--C---
Confidence            34568999998 9999999999999998 9999987         333332222222221    1111111101  1   


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                           .+.+..-|++|.++|....   ...+..   +.+..|+.-...+.+.+    .+. +.+.++++|-..
T Consensus        70 -----~~a~~~aDiVIiaag~p~k---~G~~R~---dl~~~N~~i~~~i~~~i----~~~~p~a~iivvtNPv  127 (324)
T 3gvi_A           70 -----YAAIEGADVVIVTAGVPRK---PGMSRD---DLLGINLKVMEQVGAGI----KKYAPEAFVICITNPL  127 (324)
T ss_dssp             -----GGGGTTCSEEEECCSCCCC--------C---HHHHHHHHHHHHHHHHH----HHHCTTCEEEECCSSH
T ss_pred             -----HHHHCCCCEEEEccCcCCC---CCCCHH---HHHHhhHHHHHHHHHHH----HHHCCCeEEEecCCCc
Confidence                 1345679999999985322   112222   34455555444444444    433 345666666543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.66  E-value=0.0048  Score=50.93  Aligned_cols=34  Identities=24%  Similarity=0.084  Sum_probs=31.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.+++++|+|+ |.+|+.+++.+...|++|+++++
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~  203 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDT  203 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC
Confidence            56889999996 89999999999999999999987

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.65  E-value=0.0093  Score=49.03  Aligned_cols=79  Identities=20%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++.+.+..    ++.+.. .++..+.++..+.+.++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~---------~~~~~~~a----~~lGa~-~i~~~~~~~~~~~v~~~  249 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDL---------NPARLAHA----KAQGFE-IADLSLDTPLHEQIAAL  249 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES---------CHHHHHHH----HHTTCE-EEETTSSSCHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcC---------CHHHHHHH----HHcCCc-EEccCCcchHHHHHHHH
Confidence            4789999995 9999999888888899 6887765         44444332    333433 33333332222222222


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      .. -..+|++|.++|.
T Consensus       250 t~-g~g~Dvvid~~G~  264 (398)
T 1kol_A          250 LG-EPEVDCAVDAVGF  264 (398)
T ss_dssp             HS-SSCEEEEEECCCT
T ss_pred             hC-CCCCCEEEECCCC
Confidence            11 1269999999985

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.61  E-value=0.0045  Score=46.46  Aligned_cols=30  Identities=20%  Similarity=0.172  Sum_probs=27.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++|+|+ |.+|..+|+.|.++|+.|+++++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~   31 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINK   31 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEEC
Confidence            5889996 89999999999999999999987

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.54  E-value=0.085  Score=41.99  Aligned_cols=118  Identities=16%  Similarity=0.222  Sum_probs=65.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++.+++.|+|+ |.+|.+++..|+.+|.  .++++|+         ++.+.+....++.........+. ....     +
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di---------~~~~~~g~~~dl~~~~~~~~~~~-~v~~-----~   67 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDL---------DTEKVRGDVMDLKHATPYSPTTV-RVKA-----G   67 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECS---------CHHHHHHHHHHHHHHGGGSSSCC-EEEE-----C
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC---------ChhHhhhhhhhHHhhhhhcCCCe-EEEe-----C
Confidence            34468999999 9999999999998884  7999987         44444433333333210000011 0000     0


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEec
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTAS  151 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  151 (223)
                       ..+.+...|++|..+|.... +  ..+..   ..+..|+.-...+.+.+    .+. +.+.++++|-
T Consensus        68 -~~~a~~~aDvVvi~ag~~~~-~--g~~r~---dl~~~n~~i~~~i~~~i----~~~~p~a~viv~tN  124 (317)
T 3d0o_A           68 -EYSDCHDADLVVICAGAAQK-P--GETRL---DLVSKNLKIFKSIVGEV----MASKFDGIFLVATN  124 (317)
T ss_dssp             -CGGGGTTCSEEEECCCCCCC-T--TCCHH---HHHHHHHHHHHHHHHHH----HHTTCCSEEEECSS
T ss_pred             -CHHHhCCCCEEEECCCCCCC-C--CCcHH---HHHHHHHHHHHHHHHHH----HHhCCCcEEEEecC
Confidence             13345689999999986332 1  23333   33455555444444444    443 3456666544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.52  E-value=0.014  Score=47.93  Aligned_cols=35  Identities=20%  Similarity=0.170  Sum_probs=31.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+++++|+|+ |++|+.+++.+...|++|+++++
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~  203 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDV  203 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            457899999996 79999999999999999999887

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.51  E-value=0.014  Score=46.02  Aligned_cols=64  Identities=13%  Similarity=0.202  Sum_probs=42.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC---------CCChhhhhHHHHHHHHhCCccc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD---------GKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      .+++++|+|+|+ ||+|..+++.|+..|. ++.++|.+..+..+         .....+.+...+.+...+..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~  106 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVL  106 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSE
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcE
Confidence            467789999987 5999999999999995 78888875532110         0112445555666666555443

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.50  E-value=0.01  Score=48.91  Aligned_cols=34  Identities=24%  Similarity=0.184  Sum_probs=30.8

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.+.+++|+|+ |.+|..+++.+...|++|+++++
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~  221 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDV  221 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcC
Confidence            35679999999 69999999999999999999987

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.49  E-value=0.031  Score=44.66  Aligned_cols=116  Identities=16%  Similarity=0.182  Sum_probs=65.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHh----CCccccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~   83 (223)
                      .+++.|+|+ |.+|.+++..|+..|. .++++|+         ++.+.+....++...    ........++  +     
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di---------~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d-----   67 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDI---------AQGMPNGKALDLLQTCPIEGVDFKVRGTN--D-----   67 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS---------SSSHHHHHHHHHHTTHHHHTCCCCEEEES--C-----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeC---------ChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C-----
Confidence            457888995 9999999999999887 9999987         333333222333321    0011110001  1     


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                         .+.+...|++|.++|....   ...+..   +.+..|+.-...+.+.+..+   .+.+.++++|-..
T Consensus        68 ---~~a~~~aDvVIi~ag~p~k---~G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  125 (321)
T 3p7m_A           68 ---YKDLENSDVVIVTAGVPRK---PGMSRD---DLLGINIKVMQTVGEGIKHN---CPNAFVICITNPL  125 (321)
T ss_dssp             ---GGGGTTCSEEEECCSCCCC---TTCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             ---HHHHCCCCEEEEcCCcCCC---CCCCHH---HHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence               1345679999999986322   123333   34555655555555544322   2345666665433

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.46  E-value=0.056  Score=43.25  Aligned_cols=120  Identities=13%  Similarity=0.144  Sum_probs=68.0

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      -+.+++.|+|+ |.+|.+++..|+..+.  .++++|+         +..+.+....++.... ....+. ....     +
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di---------~~~~~~g~~~dl~~~~-~~~~~~-~i~~-----~   69 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI---------FKDKTKGDAIDLSNAL-PFTSPK-KIYS-----A   69 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------CHHHHHHHHHHHHTTG-GGSCCC-EEEE-----C
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC---------CchHhHHHHHHHHHHH-HhcCCe-EEEE-----C
Confidence            34568999999 9999999999998875  7999987         5555555444554321 111110 0000     0


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                       -.+.+...|++|..+|....   ...+.+   ..+..|+.-...+.+.+..+   .+.+.|+++|-..
T Consensus        70 -~~~a~~~aDvVii~ag~~~k---~g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  128 (326)
T 2zqz_A           70 -EYSDAKDADLVVITAGAPQK---PGETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPV  128 (326)
T ss_dssp             -CGGGGGGCSEEEECCCCC--------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSH
T ss_pred             -CHHHhCCCCEEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcH
Confidence             12335679999999986321   122333   34555555444444444332   3446777765543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.45  E-value=0.016  Score=46.58  Aligned_cols=76  Identities=24%  Similarity=0.278  Sum_probs=49.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+... |++|+++++         ++++.+.    +++.+.....+..+  +   ..+++
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~---------~~~~~~~----~~~lGa~~~i~~~~--~---~~~~v  231 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDL---------DDDRLAL----AREVGADAAVKSGA--G---AADAI  231 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES---------CHHHHHH----HHHTTCSEEEECST--T---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC---------CHHHHHH----HHHcCCCEEEcCCC--c---HHHHH
Confidence            4789999998 99999988877777 789999876         5544432    23334443333322  2   23333


Q ss_pred             HHhc--CCccEEEeccCC
Q psy16220         87 LENF--GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~  102 (223)
                      .+..  ..+|+++.++|.
T Consensus       232 ~~~t~g~g~d~v~d~~G~  249 (345)
T 3jv7_A          232 RELTGGQGATAVFDFVGA  249 (345)
T ss_dssp             HHHHGGGCEEEEEESSCC
T ss_pred             HHHhCCCCCeEEEECCCC
Confidence            3322  279999999984

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.39  E-value=0.011  Score=48.64  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         +..+.+.    +++.+.. .++..+.+-..+.+.++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~---------~~~~~~~----a~~lGa~-~i~~~~~~~~~~~~~~~  249 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQ---------NPERLKL----LSDAGFE-TIDLRNSAPLRDQIDQI  249 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEES---------CHHHHHH----HHTTTCE-EEETTSSSCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC---------CHHHHHH----HHHcCCc-EEcCCCcchHHHHHHHH
Confidence            4789999997 9999999988888899 8998876         4444432    2333332 33333322112222222


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      .. -..+|++|.++|.
T Consensus       250 ~~-g~g~Dvvid~~g~  264 (398)
T 2dph_A          250 LG-KPEVDCGVDAVGF  264 (398)
T ss_dssp             HS-SSCEEEEEECSCT
T ss_pred             hC-CCCCCEEEECCCC
Confidence            11 1269999999984

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.33  E-value=0.077  Score=42.08  Aligned_cols=31  Identities=26%  Similarity=0.358  Sum_probs=28.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      +++.|+|+ |.+|..++..|+..|. +|+++|+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di   34 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDI   34 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC
Confidence            47899999 9999999999999996 8999887

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.32  E-value=0.0056  Score=47.87  Aligned_cols=38  Identities=32%  Similarity=0.581  Sum_probs=34.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+++||.++|+|+++-+|+.+|..|+++|++|.++.+
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~  192 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHI  192 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            35689999999999999999999999999999999864

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=96.31  E-value=0.056  Score=35.39  Aligned_cols=83  Identities=13%  Similarity=0.193  Sum_probs=63.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ...+|....--|-..+++.+.++|.+|+++..       ..++..-.+..+++..++..+ ..+.|-.+....+.++.+.
T Consensus         3 qifvvfssdpeilkeivreikrqgvrvvllys-------dqdekrrrerleefekqgvdv-rtvedkedfrenireiwer   74 (162)
T 2l82_A            3 QIFVVFSSDPEILKEIVREIKRQGVRVVLLYS-------DQDEKRRRERLEEFEKQGVDV-RTVEDKEDFRENIREIWER   74 (162)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEEEEEEC-------CSCHHHHHHHHHHHHTTTCEE-EECCSHHHHHHHHHHHHHH
T ss_pred             eEEEEecCCHHHHHHHHHHHHhCCeEEEEEec-------CchHHHHHHHHHHHHHcCCce-eeeccHHHHHHHHHHHHHh
Confidence            35667777788999999999999999999875       334555666777888876544 3455666677778888999


Q ss_pred             cCCccEEEecc
Q psy16220         90 FGRIDIVINNA  100 (223)
Q Consensus        90 ~~~id~li~~a  100 (223)
                      ++.+|+++...
T Consensus        75 ypqldvvvivt   85 (162)
T 2l82_A           75 YPQLDVVVIVT   85 (162)
T ss_dssp             CTTCCEEEEEE
T ss_pred             CCCCcEEEEEe
Confidence            99999987654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.27  E-value=0.0096  Score=48.45  Aligned_cols=35  Identities=26%  Similarity=0.459  Sum_probs=32.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++||+++|+|. |.+|..+|+.|.+.|++|++.++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~  204 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDV  204 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcC
Confidence            588999999997 78999999999999999998876

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.24  E-value=0.026  Score=44.10  Aligned_cols=32  Identities=13%  Similarity=0.332  Sum_probs=29.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++.|+|++|.+|.++++.|++.|++|++.+|
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r   43 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEI   43 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC
Confidence            47999999999999999999999999999877

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.22  E-value=0.059  Score=42.95  Aligned_cols=116  Identities=16%  Similarity=0.128  Sum_probs=64.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+++.|+|+ |.+|..++..|+..|.  .++++|++         +.+.+....++.... ...   .+ ..+..  .. 
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~---------~~~~~g~~~dl~~~~-~~~---~~-~~i~~--~~-   68 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVF---------KEKAIGEAMDINHGL-PFM---GQ-MSLYA--GD-   68 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC------------CCHHHHHHTTSC-CCT---TC-EEEC----C-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC---------hHHHHHHHHHHHHhH-Hhc---CC-eEEEE--CC-
Confidence            357888998 9999999999999887  89999873         333333333333211 110   01 01111  11 


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      .+.+...|++|.++|.... +  ..+.+   +.+..|+.-...+.+.+.++   .+.+.++++|-
T Consensus        69 ~~a~~~aDvVii~~g~p~k-~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (318)
T 1y6j_A           69 YSDVKDCDVIVVTAGANRK-P--GETRL---DLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  124 (318)
T ss_dssp             GGGGTTCSEEEECCCC---------CHH---HHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             HHHhCCCCEEEEcCCCCCC-C--CcCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence            3346789999999986321 1  22222   34566666555565555443   33456666543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.16  E-value=0.023  Score=45.65  Aligned_cols=63  Identities=17%  Similarity=0.171  Sum_probs=42.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-CC---------ChhhhhHHHHHHHHhCCccc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-GK---------SSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~   70 (223)
                      +++++|+|.|++ |+|.++++.|+..|. ++.++|+......+ .|         ...+.+...+.+.+....+.
T Consensus        32 L~~~~VlIvGaG-GlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~  105 (340)
T 3rui_A           32 IKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMD  105 (340)
T ss_dssp             HHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCE
T ss_pred             HhCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCE
Confidence            568899999885 999999999999996 68888876533211 11         12345555666666555443

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.15  E-value=0.015  Score=43.94  Aligned_cols=39  Identities=21%  Similarity=0.334  Sum_probs=34.3

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      |..++++||.+||+||+ .+|..-++.|++.|++|++++.
T Consensus        24 Pifl~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap   62 (223)
T 3dfz_A           24 TVMLDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAP   62 (223)
T ss_dssp             EEEECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECS
T ss_pred             ccEEEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECC
Confidence            44567899999999985 8999999999999999999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.09  E-value=0.011  Score=46.98  Aligned_cols=32  Identities=16%  Similarity=0.250  Sum_probs=29.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      .|.++||+|+ |++|...++.+...|++|+.++
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~  173 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS  173 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE
Confidence            4789999999 9999999998888899999885

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.03  E-value=0.014  Score=45.45  Aligned_cols=35  Identities=17%  Similarity=0.339  Sum_probs=32.9

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++||.++|+|+++-+|+.+|..|+++|++|.++.+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~  182 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS  182 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence            78999999999999999999999999999999864

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.00  E-value=0.012  Score=45.92  Aligned_cols=38  Identities=34%  Similarity=0.383  Sum_probs=34.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+++||.++|.|.++-+|+.+|..|+..|++|.++.+
T Consensus       156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs  193 (286)
T 4a5o_A          156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHR  193 (286)
T ss_dssp             TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            35689999999999999999999999999999999854

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.95  E-value=0.015  Score=45.79  Aligned_cols=37  Identities=27%  Similarity=0.410  Sum_probs=34.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++||.++|+|.++-+|+.+|..|++.|++|.++.|
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~  197 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHS  197 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            5689999999999999999999999999999999865

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.94  E-value=0.0081  Score=54.01  Aligned_cols=34  Identities=26%  Similarity=0.332  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .|.++||.||+|++|.+.++.....|++|+.+++
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~  378 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATAS  378 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence            4789999999999999999888888999999864

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.92  E-value=0.098  Score=41.66  Aligned_cols=116  Identities=15%  Similarity=0.192  Sum_probs=64.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +++.|+|+ |.+|.+++..|+..+.  .++++|+         ++++.+....++.... ....+. ....     + -.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di---------~~~~~~g~~~dl~~~~-~~~~~~-~v~~-----~-~~   67 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV---------VKDRTKGDALDLEDAQ-AFTAPK-KIYS-----G-EY   67 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------SHHHHHHHHHHHHGGG-GGSCCC-EEEE-----C-CG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC---------CchHHHHHHHHHHHHH-HhcCCe-EEEE-----C-CH
Confidence            58999999 9999999999998876  7999987         5655655455554322 111110 0000     0 13


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                      +.+...|++|..+|.... +  ..+.   .+.+..|+.-...    +.+.+.+. +.+.++++|-..
T Consensus        68 ~a~~~aDvVii~ag~~~~-~--g~~R---~dl~~~n~~i~~~----i~~~i~~~~p~a~iiv~tNPv  124 (318)
T 1ez4_A           68 SDCKDADLVVITAGAPQK-P--GESR---LDLVNKNLNILSS----IVKPVVDSGFDGIFLVAANPV  124 (318)
T ss_dssp             GGGTTCSEEEECCCC----------------CHHHHHHHHHH----HHHHHHHTTCCSEEEECSSSH
T ss_pred             HHhCCCCEEEECCCCCCC-C--CCCH---HHHHHHHHHHHHH----HHHHHHHhCCCeEEEEeCCcH
Confidence            346789999999986321 1  1121   2234445444444    44444443 446777765433

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.91  E-value=0.052  Score=43.22  Aligned_cols=33  Identities=24%  Similarity=0.251  Sum_probs=28.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.+++.|+|. |.+|..+|+.|++.|++|++.+|
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr   62 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNR   62 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcC
Confidence            4457888865 79999999999999999999987

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.88  E-value=0.04  Score=43.86  Aligned_cols=113  Identities=17%  Similarity=0.156  Sum_probs=61.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHh----CCccccccCCccchHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSK----GGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++.|+|+ |.+|.+++..|+..|.  .++++|+         ++.+.+....++...    ........++.        
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~---------~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--------   63 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDI---------KDGMPQGKALDMRESSPIHGFDTRVTGTND--------   63 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECS---------STTHHHHHHHHHHHHHHHHTCCCEEEEESS--------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC---------chHHHHHHHHHHhccccccCCCcEEEECCC--------
Confidence            5788996 9999999999999887  8999987         333333222223211    11111100111        


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                        .+.+..-|++|.++|.... +  ..+   -.+.++.|+.-...+.+    .+.+. +.+.++++|-..
T Consensus        64 --~~a~~~aDvVii~ag~~~k-p--G~~---R~dl~~~N~~i~~~i~~----~i~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           64 --YGPTEDSDVCIITAGLPRS-P--GMS---RDDLLAKNTEIVGGVTE----QFVEGSPDSTIIVVANPL  121 (314)
T ss_dssp             --SGGGTTCSEEEECCCC-------------CHHHHHHHHHHHHHHHH----HHHTTCTTCEEEECCSSH
T ss_pred             --HHHhCCCCEEEECCCCCCC-C--CCC---HHHHHHhhHHHHHHHHH----HHHHhCCCcEEEecCCch
Confidence              2345679999999986321 1  122   23445566554444444    44443 346666666543

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.88  E-value=0.27  Score=39.99  Aligned_cols=122  Identities=13%  Similarity=0.129  Sum_probs=66.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-e----EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA-S----VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~-~----vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ..++.|+||+|.||.+++-.|+..+. .    +++.+.+..     ++...++...-++..........+. ..      
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~-----~~~~~~~G~amDL~h~~~p~~~~v~-i~------   99 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSE-----RSFQALEGVAMELEDSLYPLLREVS-IG------   99 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG-----GGHHHHHHHHHHHHTTTCTTEEEEE-EE------
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCcc-----chhhhhHHHHHhHHhhhhhhcCCcE-Ee------
Confidence            35799999999999999999998764 2    666544211     1333344444444432111111110 00      


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh--cCCCcEEEEecC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK--QNYGRLVMTASN  152 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~iv~vsS~  152 (223)
                      ..-.+.+...|++|..||... +  ...+.   .+.++.|..    +++.+.+.+.+  .+.+.++.+|-.
T Consensus       100 ~~~y~~~~daDvVVitag~pr-k--pG~tR---~DLl~~N~~----I~k~i~~~i~~~a~p~~ivlVvsNP  160 (375)
T 7mdh_A          100 IDPYEVFEDVDWALLIGAKPR-G--PGMER---AALLDINGQ----IFADQGKALNAVASKNVKVLVVGNP  160 (375)
T ss_dssp             SCHHHHTTTCSEEEECCCCCC-C--TTCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             cCCHHHhCCCCEEEEcCCCCC-C--CCCCH---HHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCc
Confidence            012445678999999988532 1  22333   345566655    44444445554  244666666653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.88  E-value=0.012  Score=45.89  Aligned_cols=37  Identities=27%  Similarity=0.411  Sum_probs=34.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++||.++|+|+++-+|+.+|..|.++|++|.++.+
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs  193 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            5689999999999999999999999999999999854

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.86  E-value=0.013  Score=45.71  Aligned_cols=35  Identities=26%  Similarity=0.387  Sum_probs=31.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++++++++|+|+ |++|+++++.|.+.|++|.+.+|
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r  160 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNR  160 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEEC
Confidence            467889999996 69999999999999999999876

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.84  E-value=0.14  Score=41.04  Aligned_cols=119  Identities=11%  Similarity=0.056  Sum_probs=66.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ..+++.|+|+ |.+|.++|..++..|.  .++++|+         +++..+....++..... .. .........    .
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di---------~~~~~~g~a~DL~~~~~-~~-~~~~i~~t~----d   83 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDV---------MEDKLKGEMMDLEHGSL-FL-HTAKIVSGK----D   83 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECS---------CHHHHHHHHHHHHHHGG-GS-CCSEEEEES----S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC---------CHHHHHHHHHHhhhhhh-cc-cCCeEEEcC----C
Confidence            3468899999 9999999999999997  8999987         55555544444433211 00 000000000    0


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCc
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNS  153 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~  153 (223)
                       .+.+...|++|.+||.....   ..+..   +.+..|+.-...+.+.    +.+. +.+.++++|-..
T Consensus        84 -~~~~~daDiVIitaG~p~kp---G~tR~---dll~~N~~I~k~i~~~----I~k~~P~a~ilvvtNPv  141 (330)
T 3ldh_A           84 -YSVSAGSKLVVITAGARQQE---GESRL---NLVQRNVNIFKFIIPN----IVKHSPDCLKELHPELG  141 (330)
T ss_dssp             -SCSCSSCSEEEECCSCCCCS---SCCTT---GGGHHHHHHHHHHHHH----HHHHCTTCEEEECSSSH
T ss_pred             -HHHhCCCCEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHH----HHhhCCCceEEeCCCcc
Confidence             12356799999999964321   22222   2334444433334444    3433 345666666543

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.83  E-value=0.13  Score=40.79  Aligned_cols=115  Identities=17%  Similarity=0.221  Sum_probs=65.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-C--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER-G--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~-G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++.|+||+|.+|.+++..|+.+ +  ..++++|+         ++ ..+...-++.....  ...+.....     ....
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di---------~~-~~~G~a~Dl~~~~~--~~~v~~~~~-----~~~~   64 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI---------AP-VTPGVAVDLSHIPT--AVKIKGFSG-----EDAT   64 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS---------ST-THHHHHHHHHTSCS--SEEEEEECS-----SCCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec---------CC-CchhHHHHhhCCCC--CceEEEecC-----CCcH
Confidence            6889999999999999999876 5  47899877         22 12222233332211  111110000     0012


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      +.+...|++|.+||... +  ...+.   .+.++.|+.-...+.+.+..+   .+.+.++++|-
T Consensus        65 ~~~~~aDivii~ag~~r-k--pG~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  119 (312)
T 3hhp_A           65 PALEGADVVLISAGVAR-K--PGMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (312)
T ss_dssp             HHHTTCSEEEECCSCSC-C--TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             HHhCCCCEEEEeCCCCC-C--CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecC
Confidence            34467999999999632 1  12333   455667776555565555333   23466777664

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.81  E-value=0.041  Score=42.40  Aligned_cols=34  Identities=24%  Similarity=0.303  Sum_probs=28.8

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEcc
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDL   41 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r   41 (223)
                      +.++++.|+|+ |.+|..+++.|++.|++ |.+.+|
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~   42 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSR   42 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeC
Confidence            34567889997 89999999999999998 788876

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.80  E-value=0.16  Score=39.58  Aligned_cols=35  Identities=17%  Similarity=0.237  Sum_probs=27.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHH-cCCeEE-EEccC
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAE-RGASVV-VNDLG   42 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~-~G~~vv-~~~r~   42 (223)
                      +..++.|+|++|.+|+.+++.+.+ .|+.++ +++++
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~   40 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   40 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            345899999999999999999875 477776 55543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.80  E-value=0.27  Score=38.66  Aligned_cols=114  Identities=11%  Similarity=0.124  Sum_probs=63.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc--ccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP--NYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   86 (223)
                      ++-|+|+ |+||.++|..|+.++.  .++++|.         ++...+-..-++.........  .+.-..+.       
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di---------~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-------   64 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI---------AEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------   64 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS---------SHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeC---------CCCcchhhhhhhhcccccCCCCCeEecCCCH-------
Confidence            5778895 9999999999988874  6999987         444444333344321110100  00000111       


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecC
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASN  152 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~  152 (223)
                       +.+..-|++|..||....   ...+.++   .++.|..    +++.+.+.+.+.. .+.++.+|-.
T Consensus        65 -~~~~~aDvVvitAG~prk---pGmtR~d---Ll~~Na~----I~~~i~~~i~~~~p~aivlvvsNP  120 (294)
T 2x0j_A           65 -SLLKGSEIIVVTAGLARK---PGMTRLD---LAHKNAG----IIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             -GGGTTCSEEEECCCCCCC---SSSCHHH---HHHHHHH----HHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             -HHhCCCCEEEEecCCCCC---CCCchHH---HHHHHHH----HHHHHHHHHHhcCCceEEEEecCc
Confidence             234578999999996432   2344444   4566665    4444444445543 3555555543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.79  E-value=0.019  Score=45.28  Aligned_cols=36  Identities=28%  Similarity=0.277  Sum_probs=32.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+.+++++|+|+ |+||+++++.+...|++|++.+|
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~  188 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGAR  188 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEEC
Confidence            4578999999996 89999999999999999999987

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.79  E-value=0.087  Score=41.85  Aligned_cols=33  Identities=21%  Similarity=0.280  Sum_probs=29.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r   41 (223)
                      ..+++.|+| .|.+|.++|+.|.+.|+  +|++.+|
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr   66 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI   66 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEEC
Confidence            346889998 78999999999999999  9999987

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.77  E-value=0.2  Score=39.70  Aligned_cols=31  Identities=26%  Similarity=0.443  Sum_probs=28.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      +++.|+|+ |.+|.++|..|+..|+ +|++.++
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~   36 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDI   36 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeC
Confidence            57889998 8999999999999998 9999987

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.76  E-value=0.011  Score=59.39  Aligned_cols=81  Identities=17%  Similarity=0.267  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.+|||.||+||+|.+.++.....|++|+++++         +.++.+.+.+.+...+....++..+    ..+.+.+.
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~---------s~~k~~~l~~~~~~lga~~v~~~~~----~~~~~~i~ 1733 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVG---------SAEKRAYLQARFPQLDETCFANSRD----TSFEQHVL 1733 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHCTTCCSTTEEESSS----SHHHHHHH
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeC---------ChhhhHHHHhhcCCCCceEEecCCC----HHHHHHHH
Confidence            4789999999999999999888888999998865         4444433322211112222223222    13344444


Q ss_pred             Hhc--CCccEEEeccC
Q psy16220         88 ENF--GRIDIVINNAG  101 (223)
Q Consensus        88 ~~~--~~id~li~~ag  101 (223)
                      +..  ..+|+++++.+
T Consensus      1734 ~~t~g~GvDvVld~~g 1749 (2512)
T 2vz8_A         1734 RHTAGKGVDLVLNSLA 1749 (2512)
T ss_dssp             HTTTSCCEEEEEECCC
T ss_pred             HhcCCCCceEEEECCC
Confidence            433  25899988765

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.73  E-value=0.02  Score=44.73  Aligned_cols=38  Identities=26%  Similarity=0.321  Sum_probs=34.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..++.|+.++|+|++.-+|+.+|+.|+..|++|.++++
T Consensus       154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs  191 (288)
T 1b0a_A          154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR  191 (288)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred             CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeC
Confidence            35689999999999999999999999999999999864

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.71  E-value=0.071  Score=40.81  Aligned_cols=77  Identities=13%  Similarity=0.121  Sum_probs=53.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++.|+|++|.+|+.+++.+.+. |+.++.....        . ...++    +......+..|.+........+....+.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~--------~-~dl~~----~~~~~~DvvIDfT~p~a~~~~~~~a~~~   68 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA--------G-DPLSL----LTDGNTEVVIDFTHPDVVMGNLEFLIDN   68 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT--------T-CCTHH----HHHTTCCEEEECSCTTTHHHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc--------C-CCHHH----HhccCCcEEEEccChHHHHHHHHHHHHc
Confidence            5899999999999999998866 8888755431        1 11222    1122456778888888776666655543


Q ss_pred             cCCccEEEeccCC
Q psy16220         90 FGRIDIVINNAGI  102 (223)
Q Consensus        90 ~~~id~li~~ag~  102 (223)
                        ++++||.+.|+
T Consensus        69 --g~~~VigTTG~   79 (245)
T 1p9l_A           69 --GIHAVVGTTGF   79 (245)
T ss_dssp             --TCEEEECCCCC
T ss_pred             --CCCEEEcCCCC
Confidence              78899988874

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.69  E-value=0.1  Score=41.29  Aligned_cols=113  Identities=17%  Similarity=0.104  Sum_probs=58.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|+ |.+|.+++..|+..|.  .|+++|+         ++...+....++.... ....+. ....     .. .+
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~---------~~~~~~~~~~~l~~~~-~~~~~~-~i~~-----~~-~~   63 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDR---------DEDRAQAEAEDIAHAA-PVSHGT-RVWH-----GG-HS   63 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS---------SHHHHHHHHHHHTTSC-CTTSCC-EEEE-----EC-GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC---------CHHHHHHHHHhhhhhh-hhcCCe-EEEE-----CC-HH
Confidence            6888998 9999999999999998  8999987         5444433333332211 100000 0000     01 13


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEe
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTA  150 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vs  150 (223)
                      .+...|++|.+++.... +  ..+   -.+.+..|+.-...+.+.+.++   .+.+.++++|
T Consensus        64 a~~~aDvVIi~~~~~~~-~--g~~---r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~t  116 (304)
T 2v6b_A           64 ELADAQVVILTAGANQK-P--GES---RLDLLEKNADIFRELVPQITRA---APDAVLLVTS  116 (304)
T ss_dssp             GGTTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECS
T ss_pred             HhCCCCEEEEcCCCCCC-C--CCc---HHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEec
Confidence            45679999999985321 1  111   1234455555445555554443   2334555544

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.69  E-value=0.038  Score=44.32  Aligned_cols=76  Identities=21%  Similarity=0.225  Sum_probs=47.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ +++|...+..++.. |++|+++++         ++++.+    ..++.+....++..+.+-.    +++
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~---------~~~r~~----~~~~~Ga~~~i~~~~~~~~----~~v  224 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDI---------NQDKLN----LAKKIGADVTINSGDVNPV----DEI  224 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEES---------CHHHHH----HHHHTTCSEEEEC-CCCHH----HHH
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEEC---------cHHHhh----hhhhcCCeEEEeCCCCCHH----HHh
Confidence            4789999987 78888777777655 789999876         444432    2334455555555544322    333


Q ss_pred             HHhcC--CccEEEeccC
Q psy16220         87 LENFG--RIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~--~id~li~~ag  101 (223)
                      .+..+  .+|.++.+++
T Consensus       225 ~~~t~g~g~d~~~~~~~  241 (348)
T 4eez_A          225 KKITGGLGVQSAIVCAV  241 (348)
T ss_dssp             HHHTTSSCEEEEEECCS
T ss_pred             hhhcCCCCceEEEEecc
Confidence            33332  5778888776

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.68  E-value=0.058  Score=42.48  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=30.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      +++.|+||.|.+|.++++.|++.|++|++.+|+
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~   54 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRE   54 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence            578999999999999999999999999999874

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.66  E-value=0.12  Score=41.92  Aligned_cols=34  Identities=24%  Similarity=0.241  Sum_probs=29.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      +++++.|+| .|.+|..+|+.|++.|+.|++.+|+
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~   54 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLN   54 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC
Confidence            456788887 6899999999999999999999883

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.64  E-value=0.023  Score=43.96  Aligned_cols=70  Identities=26%  Similarity=0.344  Sum_probs=47.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .++++ +++|+|+ |++|+++++.|.+.|++|.+++|         +.++.+.+.+++.   ..    .   .+.+    
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r---------~~~~~~~l~~~~~---~~----~---~~~~----  167 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNR---------TPQRALALAEEFG---LR----A---VPLE----  167 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECS---------SHHHHHHHHHHHT---CE----E---CCGG----
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhc---cc----h---hhHh----
Confidence            35678 8999997 67999999999999999999876         5555544443332   11    1   1111    


Q ss_pred             HHHHhcCCccEEEeccCCC
Q psy16220         85 TALENFGRIDIVINNAGIL  103 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~  103 (223)
                         +. ...|+||++....
T Consensus       168 ---~~-~~~Divi~~tp~~  182 (263)
T 2d5c_A          168 ---KA-REARLLVNATRVG  182 (263)
T ss_dssp             ---GG-GGCSEEEECSSTT
T ss_pred             ---hc-cCCCEEEEccCCC
Confidence               11 3589999998754

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.63  E-value=0.31  Score=38.60  Aligned_cols=116  Identities=17%  Similarity=0.123  Sum_probs=66.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|+ |.+|.+++..|+.++  ..++++|+         ++++.+....++.... ....+. ....     .. .+
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di---------~~~k~~g~a~dl~~~~-~~~~~~-~v~~-----~~-~~   63 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDL---------DRKLAQAHAEDILHAT-PFAHPV-WVWA-----GS-YG   63 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS---------SHHHHHHHHHHHHTTG-GGSCCC-EEEE-----CC-GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC---------ChhHHHHHHHHHHHhH-hhcCCe-EEEE-----CC-HH
Confidence            6889998 999999999999886  57999987         5555554444554321 000000 0000     11 23


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS  153 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  153 (223)
                      .+...|++|..+|....   ...+.++   .+..|+.-...+.+.+..+   .+.+.|+++|-..
T Consensus        64 a~~~aD~Vii~ag~~~~---~g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  119 (310)
T 2xxj_A           64 DLEGARAVVLAAGVAQR---PGETRLQ---LLDRNAQVFAQVVPRVLEA---APEAVLLVATNPV  119 (310)
T ss_dssp             GGTTEEEEEECCCCCCC---TTCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             HhCCCCEEEECCCCCCC---CCcCHHH---HHHhhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence            45689999999986432   1233333   3555555444444444222   3446777765543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.62  E-value=0.52  Score=40.22  Aligned_cols=149  Identities=12%  Similarity=-0.007  Sum_probs=88.6

Q ss_pred             cCCcEEEEEcCCC-chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          7 FDGRVAIVTGAGA-GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         7 ~~~~~~lItGa~~-giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ..|.+.++....+ +++..++..|.++|.+++.+.....         .                    |..+....+.+
T Consensus        48 ~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~---------~--------------------~~~~~~~~l~~   98 (525)
T 3qp9_A           48 LSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL---------G--------------------DRQRLAATLGE   98 (525)
T ss_dssp             CCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT---------C--------------------CHHHHHHHHHH
T ss_pred             CCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC---------C--------------------CHHHHHHHHHh
Confidence            3455555554443 2889999999999999888743100         0                    22222223332


Q ss_pred             -HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHH-hhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         86 -ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD-VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        86 -~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~-~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                       +....+.++.++|..+..........       .+. ..+.+.+.|.|.+...   ....++.+++..+...+ +....
T Consensus        99 ~~~~~~~~~~~v~~l~~~~~~~~~~~~-------~~~~~g~~~~l~l~qal~~~---~~~~~l~~vT~ga~~~~-~~~~~  167 (525)
T 3qp9_A           99 ALAAAGGAVDGVLSLLAWDESAHPGHP-------APFTRGTGATLTLVQALEDA---GVAAPLWCVTHGAVSVG-RADHV  167 (525)
T ss_dssp             HHHHTTSCCSEEEECGGGCCCBCTTSC-------TTCBHHHHHHHHHHHHHHHT---TCCSCEEEEEESCCCCB-TTBCC
T ss_pred             hhhcccCCCCeEEEcccCCCCcccccc-------ccccchHHHHHHHHHHHHhc---CCCCcEEEEECCCEeCC-CCCCC
Confidence             22455688999998875432111100       011 3355677788876432   22367888877553332 12223


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPT  195 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg  195 (223)
                      -...++++.+|.|+++.|+.....+...+-+.
T Consensus       168 ~~p~~a~l~Gl~r~~~~E~p~~~~~~vDl~~~  199 (525)
T 3qp9_A          168 TSPAQAMVWGMGRVAALEHPERWGGLIDLPSD  199 (525)
T ss_dssp             SCHHHHHHHHHHHHHHHHSTTTEEEEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHhCCCceEEEEEcCCC
Confidence            36789999999999999997766667777554

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.62  E-value=0.31  Score=38.95  Aligned_cols=31  Identities=29%  Similarity=0.500  Sum_probs=28.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      +++.|+|+ |.+|.++|..|+..|. +|++.|+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di   46 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDI   46 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEEC
Confidence            57889998 9999999999999998 9999987

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.61  E-value=0.019  Score=44.68  Aligned_cols=37  Identities=32%  Similarity=0.574  Sum_probs=33.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAER--GASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r   41 (223)
                      .+++||+++|+|++.-+|+.+|+.|+++  |++|.++.+
T Consensus       154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~  192 (281)
T 2c2x_A          154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHT  192 (281)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECT
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence            4689999999999988999999999999  899999854

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.61  E-value=0.032  Score=43.97  Aligned_cols=31  Identities=29%  Similarity=0.379  Sum_probs=28.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++.|+|+ |.+|.++|..|++.|++|++.++
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~   46 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQ   46 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC
Confidence            46888988 79999999999999999999987

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.60  E-value=0.051  Score=43.53  Aligned_cols=78  Identities=18%  Similarity=0.223  Sum_probs=49.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeE-EEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASV-VVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~v-v~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|+++||+|+ |++|...++.+...|+.+ +++++         ++++.+    ..++.+....++..+.+ .....+.+
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~---------~~~k~~----~a~~lGa~~~i~~~~~~-~~~~~~~~  224 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDI---------SSEKLA----LAKSFGAMQTFNSSEMS-APQMQSVL  224 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES---------CHHHHH----HHHHTTCSEEEETTTSC-HHHHHHHH
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEec---------hHHHHH----HHHHcCCeEEEeCCCCC-HHHHHHhh
Confidence            5789999987 899999998888889875 45543         444332    23444555555544433 33333333


Q ss_pred             HHhcCCccEEEeccC
Q psy16220         87 LENFGRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~~id~li~~ag  101 (223)
                       ......|+++.++|
T Consensus       225 -~~~~g~d~v~d~~G  238 (346)
T 4a2c_A          225 -RELRFNQLILETAG  238 (346)
T ss_dssp             -GGGCSSEEEEECSC
T ss_pred             -cccCCccccccccc
Confidence             33457899998887

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.59  E-value=0.026  Score=44.37  Aligned_cols=36  Identities=31%  Similarity=0.294  Sum_probs=32.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..+.|++++|+|+ |+||+++++.+...|++|++.+|
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr  186 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGAR  186 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEEC
Confidence            3578999999995 79999999999999999999977

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.58  E-value=0.019  Score=45.21  Aligned_cols=38  Identities=29%  Similarity=0.283  Sum_probs=34.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..++.|+.++|+|++.-+|+.+|+.|+..|++|.++++
T Consensus       160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs  197 (301)
T 1a4i_A          160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS  197 (301)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEEC
Confidence            35688999999999999999999999999999999854

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.55  E-value=0.093  Score=40.92  Aligned_cols=32  Identities=22%  Similarity=0.196  Sum_probs=28.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      +++.|+|. |.+|.++++.|++.|++|++.+|+
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~   33 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRS   33 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCC
Confidence            46778875 799999999999999999999883

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.55  E-value=0.13  Score=40.01  Aligned_cols=83  Identities=13%  Similarity=0.032  Sum_probs=49.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEccCCCCCCCCCChhhhhHHHHHHH----------HhCCccccccCC
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA---SVVVNDLGGQRDGDGKSSKAADTVVAEIR----------SKGGKAVPNYNS   75 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~   75 (223)
                      .+++.|+|+ |-+|.++++.|++.|+   +|++.+|         +.+..+.+.+.+.          -....+.+....
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr---------~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~   72 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNR---------SLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVK   72 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECS---------SSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSC
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeC---------CHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeC
Confidence            356788887 7999999999999998   8999987         4444333322110          011122222223


Q ss_pred             ccchHHHHHHHHHh-cCCccEEEeccC
Q psy16220         76 VVDGDKIVQTALEN-FGRIDIVINNAG  101 (223)
Q Consensus        76 ~~~~~~~~~~~~~~-~~~id~li~~ag  101 (223)
                      ....+.+++++... +.+=.++|++++
T Consensus        73 p~~~~~vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           73 PHQIKMVCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             GGGHHHHHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHHHHHHHhhccCCCeEEEEecC
Confidence            44456777776554 433237777655

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.53  E-value=0.52  Score=37.36  Aligned_cols=77  Identities=23%  Similarity=0.259  Sum_probs=48.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc--cccCCccchHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV--PNYNSVVDGDKIVQ   84 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   84 (223)
                      .+++.|+|+ |.+|.+++..|+..|.  .+++.|+         +++..+....++........  ..+.. .+      
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di---------~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~------   68 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA---------NESKAIGDAMDFNHGKVFAPKPVDIWH-GD------   68 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------SHHHHHHHHHHHHHHTTSSSSCCEEEE-CC------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeC---------CcchHHHHHhhHHHHhhhcCCCeEEEc-Cc------
Confidence            358999999 9999999999998874  7999987         44444433334433211110  00100 00      


Q ss_pred             HHHHhcCCccEEEeccCCCC
Q psy16220         85 TALENFGRIDIVINNAGILR  104 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~  104 (223)
                        .+.+...|++|.+++...
T Consensus        69 --~~al~~aDvViia~~~~~   86 (316)
T 1ldn_A           69 --YDDCRDADLVVICAGANQ   86 (316)
T ss_dssp             --GGGTTTCSEEEECCSCCC
T ss_pred             --HHHhCCCCEEEEcCCCCC
Confidence              234567999999998643

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.53  E-value=0.32  Score=38.71  Aligned_cols=31  Identities=23%  Similarity=0.418  Sum_probs=28.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      +++.|+|+ |.+|..++..|+..|. +|++.|+
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di   36 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDI   36 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeC
Confidence            47888998 9999999999999998 8999987

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.52  E-value=0.02  Score=45.59  Aligned_cols=39  Identities=36%  Similarity=0.458  Sum_probs=35.5

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      ..++.|++++|+|++.-+|+.+|+.|+..|++|.+++|+
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~  210 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN  210 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence            457899999999999889999999999999999999874

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.50  E-value=0.05  Score=46.93  Aligned_cols=65  Identities=17%  Similarity=0.155  Sum_probs=45.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCC-CC---------ChhhhhHHHHHHHHhCCcccc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGD-GK---------SSKAADTVVAEIRSKGGKAVP   71 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~   71 (223)
                      .+++++|+|.|++ |+|.++|+.|+..|. ++.++|.+..+..+ .|         ...+.+...+.+.+....+..
T Consensus       324 kL~~~kVLIVGaG-GLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v  399 (598)
T 3vh1_A          324 IIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDA  399 (598)
T ss_dssp             HHHTCEEEEECCS-HHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEE
T ss_pred             HHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEE
Confidence            3567899999876 999999999999997 78888765433211 11         124666677777776554433

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.50  E-value=0.4  Score=38.08  Aligned_cols=113  Identities=16%  Similarity=0.144  Sum_probs=62.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc-ccccCCccchHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA-VPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   87 (223)
                      ++.|+|+ |.+|.+++..|+..|+  .|++.++         ++...+.....+....... ...+.. .+        .
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~---------~~~~~~~~~~~l~~~~~~~~~~~i~~-~d--------~   62 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDV---------DKKRAEGDALDLIHGTPFTRRANIYA-GD--------Y   62 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------SHHHHHHHHHHHHHHGGGSCCCEEEE-CC--------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC---------ChHHHHHHHHHHHhhhhhcCCcEEEe-CC--------H
Confidence            5788998 9999999999999998  9999987         5555544433332211000 000000 01        1


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      +.+...|++|.+++.....   ..+..   +.+..|+.-...+.+.+.++   .+.+.+|+++-
T Consensus        63 ~~~~~aDvViiav~~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~~~~~ii~~tN  117 (319)
T 1a5z_A           63 ADLKGSDVVIVAAGVPQKP---GETRL---QLLGRNARVMKEIARNVSKY---APDSIVIVVTN  117 (319)
T ss_dssp             GGGTTCSEEEECCCCCCCS---SCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             HHhCCCCEEEEccCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCC
Confidence            2245789999999854321   11222   23444544444444444333   23355666544

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.49  E-value=0.036  Score=44.29  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=34.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQR   45 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~   45 (223)
                      ..+.||++.|+|. |.||+++|+.+...|++|+..+|....
T Consensus       133 ~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~  172 (324)
T 3evt_A          133 STLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGHP  172 (324)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             ccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcch
Confidence            3578999999976 599999999999999999999986543

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.48  E-value=0.024  Score=45.72  Aligned_cols=76  Identities=20%  Similarity=0.205  Sum_probs=45.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|++|++|...++.+...| .+|+.++.          ..+.+.    +. .+.....+  ...+..+.+.++
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~----------~~~~~~----~~-~ga~~~~~--~~~~~~~~~~~~  204 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS----------TFKHEA----IK-DSVTHLFD--RNADYVQEVKRI  204 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC----------GGGHHH----HG-GGSSEEEE--TTSCHHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC----------HHHHHH----HH-cCCcEEEc--CCccHHHHHHHh
Confidence            47899999999999999887766664 67777642          222221    22 23333333  223333333332


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      .  -+.+|++|.+.|.
T Consensus       205 ~--~~g~Dvv~d~~g~  218 (349)
T 4a27_A          205 S--AEGVDIVLDCLCG  218 (349)
T ss_dssp             C--TTCEEEEEEECC-
T ss_pred             c--CCCceEEEECCCc
Confidence            1  2479999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	223
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	8e-64
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-48
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-47
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-43
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-43
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-43
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-43
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	5e-42
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	9e-40
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-39
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-39
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-39
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-39
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-38
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-38
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-38
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	9e-38
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-37
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-37
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-37
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-36
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-36
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-36
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	9e-36
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-35
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-35
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-35
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-35
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-35
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-34
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-34
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-34
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-34
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-33
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-33
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-33
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-33
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-32
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-32
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-32
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-31
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-31
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-31
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-31
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-30
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-30
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-30
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	8e-29
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	9e-29
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-27
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-27
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-27
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-26
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-26
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	5e-26
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	7e-25
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	7e-22
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-19
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-18
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	8e-16
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-15
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	4e-15
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-14
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	3e-14
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-12
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-10
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	5e-09

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  198 bits (504), Expect = 8e-64
 Identities = 142/201 (70%), Positives = 168/201 (83%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RFDGRV +VTGAG GLGR+YAL  AERGA VVVNDLGG   G GK S AAD VV EIR +
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           GGKAV NY+SV  G+K+V+TAL+ FGRID+V+NNAGILRD+SF+RISD DW ++Q VHL 
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR 123

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G+F+V+RAAW HMKKQNYGR++MTAS SG+ GNFGQANYSAAK+ L+GL+NTL IEG KN
Sbjct: 124 GSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKN 183

Query: 186 NIHCNVIVPTAASRLTEDILP 206
           NIHCN I P A SR+TE ++P
Sbjct: 184 NIHCNTIAPNAGSRMTETVMP 204

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  157 bits (399), Expect = 1e-48
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 14/190 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G+  +VTG   G+GR+ A   A  GA V + DL                V   I   
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL----------RPEGKEVAEAIGGA 51

Query: 66  GGKA-VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
             +  + +        + V+ A    GR+D+++NNA I    S   +   +W+ V +V+L
Sbjct: 52  FFQVDLEDERER---VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 108

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           T    +S  A   M+K   G +V  AS  GL      A Y+A+K  LV L+ +L+++   
Sbjct: 109 TAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAP 168

Query: 185 NNIHCNVIVP 194
             I  N + P
Sbjct: 169 LRIRVNAVAP 178

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  153 bits (389), Expect = 4e-47
 Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 14/192 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   ++A++TG   G+GR+ A   A  GA + + DL             A    A IR+ 
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADL-----------VPAPEAEAAIRNL 50

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G + +     V          +  +  FGR DI++NNAGI     F  ++   W+   ++
Sbjct: 51  GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEI 110

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++   F +++A  P MK+  +GR++   S +  L      +Y + K A +G +  L+ + 
Sbjct: 111 NVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 170

Query: 183 EKNNIHCNVIVP 194
            K+ I  N I P
Sbjct: 171 GKDGITVNAIAP 182

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (363), Expect = 2e-43
 Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 15/192 (7%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G + ++TGAG G+GR  A   A+  + +V+ D+         +    +   A+ +  G K
Sbjct: 7   GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI---------NKHGLEETAAKCKGLGAK 57

Query: 69  AVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                    + + I    +      G + I++NNAG++         D   +   +V++ 
Sbjct: 58  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL 117

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE---G 182
             F  ++A  P M K N+G +V  AS +G +       Y ++K A VG   TL+ E    
Sbjct: 118 AHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAAL 177

Query: 183 EKNNIHCNVIVP 194
           +   +    + P
Sbjct: 178 QITGVKTTCLCP 189

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 4e-43
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 26/203 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R+  R+A+VTGA  G+G + A  L ++G  VV             +    + + AE +S 
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCAR---------TVGNIEELAAECKSA 57

Query: 66  GGKA--------VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ 117
           G           + N   +     +          +DI INNAG+ R  +    S + W+
Sbjct: 58  GYPGTLIPYRCDLSNEEDI---LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWK 114

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNY--GRLVMTASNSGL--LGNFGQANYSAAKMALVG 173
            + +V++      +R A+  MK++N   G ++   S SG   L       YSA K A+  
Sbjct: 115 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 174

Query: 174 LSNTLSIE--GEKNNIHCNVIVP 194
           L+  L  E    + +I    I P
Sbjct: 175 LTEGLRQELREAQTHIRATCISP 197

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  143 bits (362), Expect = 6e-43
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 19/199 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  +VAI+TG+  G+GR+ A+L A  GA V +             ++  +    +I + 
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR---------HAERLEETRQQILAA 52

Query: 66  GGKAVPNYNSVVD------GDKIVQTALENFGRIDIVINNAGIL----RDKSFARISDTD 115
           G       + V D       D+I+ T L  FG++DI++NNAG      + K+    S   
Sbjct: 53  GVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIES 112

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           +    +++L     +++ A PH+       + +++  SGL        YS AK A+   +
Sbjct: 113 YDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYT 172

Query: 176 NTLSIEGEKNNIHCNVIVP 194
              +I+  ++ I  N I P
Sbjct: 173 RNTAIDLIQHGIRVNSISP 191

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  143 bits (361), Expect = 7e-43
 Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 13/206 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+VTG  +G+G     LL   GA V  +D+         +  A   + AE+  +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---------NEAAGQQLAAELGER 53

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                 + +S  D   ++       G +++++NNAGIL           D+  +  ++  
Sbjct: 54  SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTE 113

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
             F   +     MK+   G ++  AS S  L     A YSA+K A+  L+   ++   K 
Sbjct: 114 SVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQ 172

Query: 186 --NIHCNVIVPTA-ASRLTEDILPPG 208
              I  N I P    + + +  LP G
Sbjct: 173 GYAIRVNSIHPDGIYTPMMQASLPKG 198

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  140 bits (355), Expect = 5e-42
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 16/209 (7%)

Query: 6   RFD--GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           R+    +  +VTG   G+G +     A  GA +              +    +  +++ +
Sbjct: 3   RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR---------NEYELNECLSKWQ 53

Query: 64  SKGGKAVPNYNSVVDGD---KIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLV 119
            KG +   +           K++QT    F G++DI+INN G +R K     +  D+   
Sbjct: 54  KKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFH 113

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
              +L  A+ +S+ A P +K    G ++  +S +G++     + YSA K AL  L+  L+
Sbjct: 114 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 173

Query: 180 IEGEKNNIHCNVIVPTA-ASRLTEDILPP 207
            E   + I  N + P   A+ L E +   
Sbjct: 174 CEWASDGIRANAVAPAVIATPLAEAVYDD 202

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  135 bits (341), Expect = 9e-40
 Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  +  I+TG+  G+GR+ A+L A+ GA+V +            SS+  +     I   
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR---------SSERLEETRQIILKS 52

Query: 66  GGKAVPNYNSVVD------GDKIVQTALENFGRIDIVINNAGILRDKSFARI----SDTD 115
           G       + V D       D+I+ + L+ FG+ID+++NNAG     +F           
Sbjct: 53  GVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDI 112

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           +     ++L     +++   PH+       + +++  +G         Y+ AK AL   +
Sbjct: 113 YHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYT 172

Query: 176 NTLSIEGEKNNIHCNVIVP 194
            + +I+  K  I  N + P
Sbjct: 173 RSTAIDLAKFGIRVNSVSP 191

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  134 bits (339), Expect = 1e-39
 Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           V +VTGA  G+G++ AL L + G  V+VN          +S+KAA+ V  +I + GG+A+
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNY--------ARSAKAAEEVSKQIEAYGGQAI 54

Query: 71  PNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
                V        +++TA++ +G ID+V+NNAGI RD    R+  + W  V D++LTG 
Sbjct: 55  TFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGV 114

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
           F  ++AA   M K+  GR++  AS  GL+GN GQANY+AAK  ++G S T + EG   NI
Sbjct: 115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNI 174

Query: 188 HCNVI 192
           + NV+
Sbjct: 175 NVNVV 179

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  134 bits (338), Expect = 1e-39
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 12/194 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
             + +VA+VTGAG G+GR  A +LA+  + V+             + K+ D+VV EI+S 
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISR---------TQKSCDSVVDEIKSF 57

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G ++      V   +   +++   L     +DI++NNAGI RD  F R+ + +W+ V   
Sbjct: 58  GYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRT 117

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L   F +++     M    YGR++  +S  GL GN GQANYS++K  ++G + +L+ E 
Sbjct: 118 NLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKEL 177

Query: 183 EKNNIHCNVIVPTA 196
              NI  N I P  
Sbjct: 178 ASRNITVNAIAPGF 191

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  134 bits (339), Expect = 2e-39
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 15/195 (7%)

Query: 6   RFD--GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           R++  G  A+VTG   G+G      LA  GASV              + K  +  + + R
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSR---------NQKELNDCLTQWR 53

Query: 64  SKGGKAVPNYNSVVDGD---KIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLV 119
           SKG K   +   +       +++ T   +F G+++I++NNAGI+  K     +  D+ L+
Sbjct: 54  SKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLI 113

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             ++   A+ +S  A P +K    G +V  +S SG L    +A Y A K A+  L+  L+
Sbjct: 114 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 173

Query: 180 IEGEKNNIHCNVIVP 194
            E  K+NI  N + P
Sbjct: 174 FEWAKDNIRVNGVGP 188

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  134 bits (338), Expect = 2e-39
 Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 17/209 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+VAI+TG   G+G + A    E GA V++             S   +     + + 
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR---------HSDVGEKAAKSVGT- 52

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             +     +   D D   K+     + FG +  ++NNAGI  +KS    +  +W+ +  V
Sbjct: 53  PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAV 112

Query: 123 HLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +L G F  +R     MK +  G  ++  +S  G +G+     Y+A+K A+  +S + +++
Sbjct: 113 NLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

Query: 182 GE--KNNIHCNVIVPTA-ASRLTEDILPP 207
                 ++  N + P    + L +D+   
Sbjct: 173 CALKDYDVRVNTVHPGYIKTPLVDDLPGA 201

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (332), Expect = 1e-38
 Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 16/192 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R+ G+V +VTG G G+G          GA VV+ D                 +  E+   
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---------DESGGRALEQELPGA 53

Query: 66  GGKA--VPNYNSVVDGDKIVQTALENFGRIDIVINNA-GILRDKSFARISDTDWQLVQDV 122
                 V   + V     +V   +  FGR+D V+NNA      +     S   ++ + ++
Sbjct: 54  VFILCDVTQEDDV---KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLEL 110

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +L G + +++ A P+++K   G ++  +S  G +G      Y A K A+  ++  L+++ 
Sbjct: 111 NLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDE 169

Query: 183 EKNNIHCNVIVP 194
               +  N I P
Sbjct: 170 SPYGVRVNCISP 181

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  130 bits (328), Expect = 3e-38
 Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 15/201 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   +  ++TGA  G+GR+   L A+ GA +V  D+                    + + 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI---------EEGPLREAAEAVGAH 52

Query: 66  GGKA-VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
                V +  SV   ++    AL + GR+D V++ AGI RD    ++   DW+LV  V+L
Sbjct: 53  PVVMDVADPASV---ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL 109

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           TG+F V++AA   M+++N G +V+TAS    LGN GQANY+A+   +VGL+ TL++E  +
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTRTLALELGR 168

Query: 185 NNIHCNVIVPTA-ASRLTEDI 204
             I  N + P    +R+T  +
Sbjct: 169 WGIRVNTLAPGFIETRMTAKV 189

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  130 bits (329), Expect = 6e-38
 Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 17/197 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF G+  I+TG+  G+GRS A++ A+ GA V +            +    +    +I   
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR---------NEDRLEETKQQILKA 51

Query: 66  GGKAVPNYNSVVD------GDKIVQTALENFGRIDIVINNA--GILRDKSFARISDTDWQ 117
           G  A      V D       D I+ T L  FG+IDI++NNA   +    +        +Q
Sbjct: 52  GVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQ 111

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
               ++      +++    H+ K     + +++  +G   + G   Y+ AK AL   +  
Sbjct: 112 KTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRC 171

Query: 178 LSIEGEKNNIHCNVIVP 194
            +I+  ++ +  N + P
Sbjct: 172 TAIDLIQHGVRVNSVSP 188

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  130 bits (327), Expect = 9e-38
 Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 9/188 (4%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             G+  I+TG   GLG   A      GA VV+ D+           +       E+    
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---------LDEEGAATARELGDAA 53

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                +     D  ++V  A E FG +D ++NNAGI         S   ++ V +++LTG
Sbjct: 54  RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTG 113

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F   +   P MK    G +V  +S +GL+G    ++Y A+K  + GLS   ++E   + 
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173

Query: 187 IHCNVIVP 194
           I  N + P
Sbjct: 174 IRVNSVHP 181

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  129 bits (325), Expect = 1e-37
 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 15/192 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G  A+VTGAG G+GR     L   GA VV            +++    ++  E    
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT---------RTNSDLVSLAKECPGI 52

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V     + D D   + AL   G +D+++NNA ++  + F  ++   +     V+L 
Sbjct: 53  EPVCV----DLGDWDA-TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR 107

Query: 126 GAFRVSRAAWP-HMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
             F+VS+      + +   G +V  +S    +       YS+ K A+  L+  +++E   
Sbjct: 108 SVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP 167

Query: 185 NNIHCNVIVPTA 196
           + I  N + PT 
Sbjct: 168 HKIRVNSVNPTV 179

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  129 bits (325), Expect = 2e-37
 Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+ TGAG G+GR  A+ L  RGASVVVN         G SSKAA+ VVAE++  G 
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVN--------YGSSSKAAEEVVAELKKLGA 56

Query: 68  KAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           + V     +        +   A+ +FG +D V++N+G+        ++   +  V +++ 
Sbjct: 57  QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNT 116

Query: 125 TGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
            G F V++    H ++      + ++  + + G    A Y+ +K A+ G     +++   
Sbjct: 117 RGQFFVAQQGLKHCRRGGRII-LTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGA 175

Query: 185 NNIHCNVIVP 194
             +  N I P
Sbjct: 176 KGVTVNCIAP 185

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  128 bits (322), Expect = 2e-37
 Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 5/190 (2%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            + ++TGAG G+GR+ AL  A         D         +++   + +  E R++G   
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHP--DFEPVLVLSSRTAADLEKISLECRAEGALT 59

Query: 70  VPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                 + D     ++    +E +G ID ++NNAG+ R  + + +++ D+    + +L G
Sbjct: 60  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKG 119

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            F +++A +  M++Q+ G +    S +        + Y  +K    GL  T+ +   K N
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 187 IHCNVIVPTA 196
           +    + P A
Sbjct: 180 VRITDVQPGA 189

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  126 bits (318), Expect = 1e-36
 Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 9/188 (4%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F+G++A+VTGA  G+GR+ A  LA RGA V+             S   A  +   + + G
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTAT---------SENGAQAISDYLGANG 52

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
              + N       + +++     FG +DI++NNAGI RD    R+ D +W  + + +L+ 
Sbjct: 53  KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSS 112

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            FR+S+A    M K+ +GR++   S  G +GN GQANY+AAK  L+G S +L+ E     
Sbjct: 113 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 172

Query: 187 IHCNVIVP 194
           I  NV+ P
Sbjct: 173 ITVNVVAP 180

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 2e-36
 Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 16/195 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+  IVTGA  G+GR  A  LA+ GA VVV           +S +    VV+     
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTA---------RSKETLQKVVSHCLEL 61

Query: 66  GGKAV----PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
           G  +          +   ++ V  A +  G +D++I N       +         +   +
Sbjct: 62  GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME 121

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           V+      ++ AA P + KQ+ G +V+ +S +G +     A YSA+K AL G  +++  E
Sbjct: 122 VNFLSYVVLTVAALPML-KQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 180

Query: 182 --GEKNNIHCNVIVP 194
               + N+   + V 
Sbjct: 181 YSVSRVNVSITLCVL 195

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 5e-36
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 8/192 (4%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+VAIVTG   G+G++    L E G++VV+      R  +   S A +       +K
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIAS----RKLERLKSAADELQANLPPTK 64

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             + +P   ++ + +    +V++ L+ FG+I+ ++NN G         IS   W  V + 
Sbjct: 65  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLET 124

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           +LTG F + +A +    K++ G +V         G     +  AA+  +  L+ +L++E 
Sbjct: 125 NLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEW 183

Query: 183 EKNNIHCNVIVP 194
             + I  N + P
Sbjct: 184 ACSGIRINCVAP 195

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  125 bits (314), Expect = 9e-36
 Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 14/197 (7%)

Query: 2   PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
           P+    +G+VA+VTGAG G+GR  A+ L  RG  V+VN           S+++A+ VVA 
Sbjct: 11  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA--------NSTESAEEVVAA 62

Query: 62  IRSKGGKAVP---NYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQL 118
           I+  G  A     N   V D  ++ + A++ FG++DIV +N+G++       ++  ++  
Sbjct: 63  IKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDR 122

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-QANYSAAKMALVGLSNT 177
           V  ++  G F V+R A+ H+  +  GRL++  S +G        A YS +K A+   +  
Sbjct: 123 VFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARC 180

Query: 178 LSIEGEKNNIHCNVIVP 194
           ++I+     I  NV+ P
Sbjct: 181 MAIDMADKKITVNVVAP 197

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  123 bits (309), Expect = 3e-35
 Identities = 36/192 (18%), Positives = 65/192 (33%), Gaps = 15/192 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
               +  I   A  G+G   +  L +R     V         +  ++ A    +    + 
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVIL----DRVENPTALAELKAINPKVNI 57

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                     V +  K+++   +    +DI+IN AGIL D           +    ++ T
Sbjct: 58  TFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH--------QIERTIAINFT 109

Query: 126 GAFRVSRAAWPHMKKQNY---GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           G    + A      K+     G +    S +G         YSA+K A+V  +N+L+   
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 183 EKNNIHCNVIVP 194
               +    I P
Sbjct: 170 PITGVTAYSINP 181

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 4e-35
 Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 28/210 (13%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-- 65
           +G+VA+VTGA  G+GR++A  L  +GA V + D          + +A     A +  +  
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW---------NLEAGVQCKAALHEQFE 52

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
             K +     V D        +  +++FGR+DI++NNAG+         ++ +W+    +
Sbjct: 53  PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV--------NNEKNWEKTLQI 104

Query: 123 HLTGAFRVSRAAWPHMKKQNY---GRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
           +L      +     +M KQN    G ++  +S +GL+    Q  Y A+K  +VG + + +
Sbjct: 105 NLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAA 164

Query: 180 IEGE--KNNIHCNVIVPTA-ASRLTEDILP 206
           +      + +  N I P    + + E I  
Sbjct: 165 LAANLMNSGVRLNAICPGFVNTAILESIEK 194

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  122 bits (308), Expect = 5e-35
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+ AI+TGAGAG+G+  A+  A  GASVVV+D+         ++ AA+ VV EI+  
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVDEIQQL 58

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           GG+A      +        +   A+   G++DI++NNAG    K F  +   D++   ++
Sbjct: 59  GGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYEL 117

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           ++   F +S+   P M+K   G ++   S +    N    +Y+++K A   L   ++ + 
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177

Query: 183 EKNNIHCNVIVPTA-ASRLTEDILPP 207
            + NI  N I P A  +   + ++ P
Sbjct: 178 GEKNIRVNGIAPGAILTDALKSVITP 203

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 6e-35
 Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 16/192 (8%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+V I+T A  G+G++ AL  A  GA V+  D+              ++ + E+   
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI-------------NESKLQELEKY 49

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
            G      +                 R+D++ N AG +   +     + DW    ++++ 
Sbjct: 50  PGIQTRVLDVTKKKQIDQFA--NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR 107

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTAS-NSGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
             + + +A  P M  Q  G ++  +S  S + G   +  YS  K A++GL+ +++ +  +
Sbjct: 108 SMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQ 167

Query: 185 NNIHCNVIVPTA 196
             I CN + P  
Sbjct: 168 QGIRCNCVCPGT 179

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  122 bits (307), Expect = 8e-35
 Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 21/211 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R   +VAI+TG   G+G + A L    GA VV+ D+         +      V   I S 
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI---------ADDHGQKVCNNIGSP 53

Query: 66  GGKA-----VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQL 118
              +     V     V     +V T +   G++DI+  N G+L     S     + D++ 
Sbjct: 54  DVISFVHCDVTKDEDV---RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR 110

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-QANYSAAKMALVGLSNT 177
           V D+++ GAF V++ A   M     G +V TAS S      G    Y+A K A++GL+ +
Sbjct: 111 VMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTS 170

Query: 178 LSIEGEKNNIHCNVIVPTA-ASRLTEDILPP 207
           L  E  +  I  N + P   AS L  D+   
Sbjct: 171 LCTELGEYGIRVNCVSPYIVASPLLTDVFGV 201

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  121 bits (305), Expect = 1e-34
 Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 19/202 (9%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F  +  IVTG   G+G ++   +A  GA+V V            ++ A +      +  
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYR--------SAADAVEVTEKVGKEF 57

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           G K       V + D   K +Q    + G I  +I NAG+   K    ++  D+  V DV
Sbjct: 58  GVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDV 117

Query: 123 HLTGAFRVSRAAWPHMKKQNYGRLV--------MTASNSGLLGNFGQANYSAAKMALVGL 174
           ++ G F   RA      ++     +           + S L G+  Q  Y+++K A   L
Sbjct: 118 NVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNL 177

Query: 175 SNTLSIEGEKNNIHCNVIVPTA 196
              L+ E     I  N + P  
Sbjct: 178 VKGLAAEWASAGIRVNALSPGY 199

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  122 bits (306), Expect = 2e-34
 Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 22/197 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +  G   ++TG  +GLGR+        GA V V D            K+A+ +       
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLD------------KSAERLAELETDH 49

Query: 66  GGKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARI-----SDTDWQ 117
           G   +     V   +   +     +  FG+ID +I NAGI    +          D  + 
Sbjct: 50  GDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFD 109

Query: 118 LVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNT 177
            V  +++ G     +A  P +     G ++ T SN+G   N G   Y+AAK A+VGL   
Sbjct: 110 EVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRE 168

Query: 178 LSIEGEKNNIHCNVIVP 194
           L+ E     +  N +  
Sbjct: 169 LAFEL-APYVRVNGVGS 184

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  120 bits (301), Expect = 4e-34
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 9/189 (4%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+VA+V+G   G+G S+   +   GA VV  D+           +    + AE+   
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---------LDEEGKAMAAELADA 53

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                 +          V TA+  FG + +++NNAGIL   +    + T+WQ + DV+LT
Sbjct: 54  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT 113

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G F   RA    MK+   G ++  +S  GL G      Y+A K A+ GL+ + ++E   +
Sbjct: 114 GVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPS 173

Query: 186 NIHCNVIVP 194
            I  N I P
Sbjct: 174 GIRVNSIHP 182

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 5e-34
 Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 15/190 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            GR  +VTGAG G+GR     L   GA VV             +    D++V E      
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR---------TQADLDSLVRECPGIEP 56

Query: 68  KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
             V      +   +  + AL + G +D+++NNA +   + F  ++   +    +V+L   
Sbjct: 57  VCVD-----LGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAV 111

Query: 128 FRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
            +VS+     +  +     +V  +S          + Y + K AL  L+  +++E   + 
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK 171

Query: 187 IHCNVIVPTA 196
           I  N + PT 
Sbjct: 172 IRVNAVNPTV 181

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  119 bits (298), Expect = 1e-33
 Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 14/192 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           D  VA+VTGA +G+G   A  L + G  V V              +   T + E+R  G 
Sbjct: 1   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCAR---------GEEGLRTTLKELREAGV 51

Query: 68  KAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHL 124
           +A      V    +I   V   +E +G +D+++NNAG     + A ++D  W  V + +L
Sbjct: 52  EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 111

Query: 125 TGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           TG FRV++       M ++  GR+V  AS  G  G    A YSA+K  +VG +  L +E 
Sbjct: 112 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 171

Query: 183 EKNNIHCNVIVP 194
            +  I  N + P
Sbjct: 172 ARTGITVNAVCP 183

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  118 bits (297), Expect = 2e-33
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           +F+G+V +VTGAG  +G + AL LAE G ++ + D+         + +A +   A +R K
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM---------NREALEKAEASVREK 52

Query: 66  GGKAVPNYNSVVDGDKIVQ---TALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQD 121
           G +A      V   + ++    + + +FG+ID + NNAG              D+  V  
Sbjct: 53  GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 112

Query: 122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
           +++TGAF V +A    M  QNYGR+V TAS +G+ G    A Y  +K A++ L+ T +++
Sbjct: 113 INVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALD 172

Query: 182 GEKNNIHCNVIVP 194
               NI  N I P
Sbjct: 173 LAPYNIRVNAISP 185

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  118 bits (297), Expect = 2e-33
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           RF  RV ++TG G+GLGR+ A+ LA  GA + + D+         SS+  +   A +   
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV---------SSEGLEASKAAVLET 51

Query: 66  --GGKAVPNYNSVVDGDKI---VQTALENFGRIDIVINNAGIL-RDKSFARISDTDWQLV 119
               + +     V D  ++   V    E FGRID   NNAGI  +       +  ++  V
Sbjct: 52  APDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV 111

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
             ++L G F         M++Q  G +V TAS  G+ G   Q+ Y+AAK  +VGL+   +
Sbjct: 112 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSA 171

Query: 180 IEGEKNNIHCNVIVP 194
           +E  +  I  N I P
Sbjct: 172 VEYGRYGIRINAIAP 186

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 3e-33
 Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 13/182 (7%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            VA+VTG   G+G +    L    +  VV           +        V +++++G   
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLT--------ARDVTRGQAAVQQLQAEGLSP 55

Query: 70  VPNYNSVVDG---DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
             +   + D      +     + +G +D+++NNAGI    +         ++    +  G
Sbjct: 56  RFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG 115

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
              V     P +K Q  GR+V  +S   +      +     K     ++    +      
Sbjct: 116 TRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 173

Query: 187 IH 188
           + 
Sbjct: 174 VE 175

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  116 bits (292), Expect = 1e-32
 Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 15/197 (7%)

Query: 6   RFD--GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
           R+   G  A+VTG   G+G +    LA  GA V              + K  D  +   R
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR---------NEKELDECLEIWR 51

Query: 64  SKGGK---AVPNYNSVVDGDKIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLV 119
            KG     +V +  S  + DK++QT    F G+++I++NNAG++  K     ++ D+ ++
Sbjct: 52  EKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNII 111

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLS 179
              +   A+ +S+ A+P +K    G ++  +S +G       + YSA+K A+  ++ +L+
Sbjct: 112 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLA 171

Query: 180 IEGEKNNIHCNVIVPTA 196
            E  K+NI  N + P  
Sbjct: 172 CEWAKDNIRVNSVAPGV 188

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  115 bits (290), Expect = 2e-32
 Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 12/192 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
             GRVA+VTG   GLG   A  LAE G SVVV              +A++         G
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR--------NLEEASEAAQKLTEKYG 54

Query: 67  GKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
            + +     V + +   K+++   E FG++D V+N AGI R          +++ V +V+
Sbjct: 55  VETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVN 114

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-QANYSAAKMALVGLSNTLSIEG 182
           L G + V R A+  +++ +   ++   S +         + Y+A+K  +  L+  L+ E 
Sbjct: 115 LFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEW 174

Query: 183 EKNNIHCNVIVP 194
            +  I  NVI P
Sbjct: 175 GRYGIRVNVIAP 186

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  115 bits (288), Expect = 3e-32
 Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 12/189 (6%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R  G+  +VTGA +G+GR+   L A  GAS+V  D            +     VA + ++
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDR---------EERLLAEAVAALEAE 52

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
               V + +     + +   ALE FGR+  V + AG+        +    W+ V  V+LT
Sbjct: 53  AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT 112

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           G+F V+R A   +++      ++   +   LG FG A+Y+A K+ +VGL+ TL++E  + 
Sbjct: 113 GSFLVARKAGEVLEEGGS---LVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARK 169

Query: 186 NIHCNVIVP 194
            +  NV++P
Sbjct: 170 GVRVNVLLP 178

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 1e-31
 Identities = 43/198 (21%), Positives = 73/198 (36%), Gaps = 5/198 (2%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            V ++TG  +G+G   A+ LA   +         +   D K+          +    G  
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLR---DLKTQGRLWEAARALACPPGSL 59

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQ-DVHLTGAF 128
                 V D   +             V+     L           D      DV++ G  
Sbjct: 60  ETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIH 188
           R+ +A  P MK++  GR+++T S  GL+G      Y A+K AL GL  +L++      +H
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 189 CNVIVPTA-ASRLTEDIL 205
            ++I      +   E +L
Sbjct: 180 LSLIECGPVHTAFMEKVL 197

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  112 bits (282), Expect = 4e-31
 Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 12/192 (6%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
            +G+V ++TG+  GLG+S A+  A   A VVVN    +          A++V+ EI+  G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE--------DEANSVLEEIKKVG 56

Query: 67  GKAVPNYNSVVDGD---KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
           G+A+     V        +VQ+A++ FG++D++INNAG+    S   +S +DW  V D +
Sbjct: 57  GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116

Query: 124 LTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEG 182
           LTGAF  SR A  +  + +  G ++  +S    +      +Y+A+K  +  ++ TL++E 
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176

Query: 183 EKNNIHCNVIVP 194
               I  N I P
Sbjct: 177 APKGIRVNNIGP 188

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  111 bits (279), Expect = 8e-31
 Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 13/184 (7%)

Query: 12  AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP 71
           AIVT      G   AL L+E G +V  +D          S K  D + A   +       
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDE---------SFKQKDELEAFAETYPQLKPM 53

Query: 72  NYNSVVDGDKIVQTALENFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRV 130
           +        ++++     +G++D++++N     + +   + +  D++   +      F +
Sbjct: 54  SEQEP---AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFAL 110

Query: 131 SRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCN 190
             A    MKK+  G ++   S +        + Y++A+     L+N LS E  + NI   
Sbjct: 111 VNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVF 170

Query: 191 VIVP 194
            I P
Sbjct: 171 AIGP 174

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  111 bits (278), Expect = 9e-31
 Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 22/201 (10%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
             +  +V  A  G+GR+ A +L++ GA V +      R+ +         VV ++R    
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICA----RNEELLKRSGHRYVVCDLR---- 54

Query: 68  KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGA 127
                        K +    E    +DI++ NAG  +   F  +++ D++   D      
Sbjct: 55  -------------KDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNM 101

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
            ++ R   P MK++ +GR+V   S S +         ++A+MAL G   TLS E     I
Sbjct: 102 IKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 161

Query: 188 HCNVIVPTA-ASRLTEDILPP 207
             N + P    +   +++L  
Sbjct: 162 TVNCVAPGWTETERVKELLSE 182

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  111 bits (278), Expect = 1e-30
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 12/191 (6%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
            G+VA+VTG+ +G+G   A  LA +GA +V+N  G         +   + V A + ++ G
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--------DAAEIEKVRAGLAAQHG 54

Query: 68  KAVPNYNSVV----DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVH 123
             V    + +        +V  A+   GRIDI++NNAGI             W  +  ++
Sbjct: 55  VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN 114

Query: 124 LTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           L+  F  + AA PHMKKQ +GR++  AS  GL+ +  ++ Y AAK  +VG +   ++E  
Sbjct: 115 LSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA 174

Query: 184 KNNIHCNVIVP 194
              I  N I P
Sbjct: 175 GQGITANAICP 185

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  110 bits (275), Expect = 2e-30
 Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 17/188 (9%)

Query: 7   FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
           F  R  +VTG   G+G + A  LA  G  V V            + K    V  ++    
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR------GSGAPKGLFGVEVDVT--- 55

Query: 67  GKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                + ++V   D+      E+ G ++++++NAG+  D    R+++  ++ V + +LTG
Sbjct: 56  -----DSDAV---DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTG 107

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
           AFRV++ A   M++  +GR++   S SGL G   QANY+A+K  ++G++ +++ E  K N
Sbjct: 108 AFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 167

Query: 187 IHCNVIVP 194
           +  NV+ P
Sbjct: 168 VTANVVAP 175

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  110 bits (276), Expect = 6e-30
 Identities = 48/194 (24%), Positives = 74/194 (38%), Gaps = 14/194 (7%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
            F G+VA +TG G GLG+    LL+  GA  V+                      +I S+
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR---------KMDVLKATAEQISSQ 72

Query: 66  GGKAVPNYNSVV----DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQD 121
            G  V      V         V   ++  G  +IVINNA         R+S   W+ + D
Sbjct: 73  TGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITD 132

Query: 122 VHLTGAFRVSRA-AWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSI 180
           + L G   V+       +K Q     +   +     G+      ++AK  +  +S +L+ 
Sbjct: 133 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAA 192

Query: 181 EGEKNNIHCNVIVP 194
           E  K  +  NVI P
Sbjct: 193 EWGKYGMRFNVIQP 206

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 8e-29
 Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 21/211 (9%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G VA++TG  +GLG + A  L  +GAS V+ DL          +   +    ++ +    
Sbjct: 5   GLVAVITGGASGLGLATAERLVGQGASAVLLDL---------PNSGGEAQAKKLGNNCVF 55

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINN------AGILRDKSFARISDTDWQLVQDV 122
           A  +  S  D    +  A   FGR+D+ +N       +     K     +  D+Q V DV
Sbjct: 56  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 115

Query: 123 HLTGAFRVSRAAWPHMKKQNY------GRLVMTASNSGLLGNFGQANYSAAKMALVGLSN 176
           +L G F V R     M +         G ++ TAS +   G  GQA YSA+K  +VG++ 
Sbjct: 116 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 175

Query: 177 TLSIEGEKNNIHCNVIVPTAASRLTEDILPP 207
            ++ +     I    I P          LP 
Sbjct: 176 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPE 206

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  106 bits (265), Expect = 9e-29
 Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 10/190 (5%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
           R DG+ A++TG+  G+GR++A      GA V + D+         + +AA    AEI   
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADI---------NLEAARATAAEIGPA 52

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                 +       D+ V   L+ +G IDI++NNA +        I+   +  +  ++++
Sbjct: 53  ACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVS 112

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASN-SGLLGNFGQANYSAAKMALVGLSNTLSIEGEK 184
           G   + +A    M     G  ++  ++ +G  G      Y A K A++ L+ +  +   +
Sbjct: 113 GTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIR 172

Query: 185 NNIHCNVIVP 194
           + I+ N I P
Sbjct: 173 HGINVNAIAP 182

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  102 bits (256), Expect = 2e-27
 Identities = 51/191 (26%), Positives = 71/191 (37%), Gaps = 21/191 (10%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           R A+VTG  +GLGR+ AL L  RG  VVV DL  +R+G+       D             
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDL--RREGEDLIYVEGD------------- 46

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFR 129
           V     V       Q     F  +                      ++ V +V+L G F 
Sbjct: 47  VTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFN 106

Query: 130 VSRAAWPH------MKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGE 183
           V R A           +   G +V TAS +   G  GQA Y+A+K  +V L+   + E  
Sbjct: 107 VLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA 166

Query: 184 KNNIHCNVIVP 194
              I    + P
Sbjct: 167 GWGIRVVTVAP 177

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (253), Expect = 4e-27
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 19/190 (10%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
           + R  +V G    LG         R   V   D+    +              E      
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTE------ 54

Query: 68  KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTG 126
                     D        L    ++D ++  AG      + ++    +  L+    +  
Sbjct: 55  --------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWT 106

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE--GEK 184
           +   S  A  H+  +  G L +  + + L G  G   Y  AK A+  L  +L+ +  G  
Sbjct: 107 STISSHLATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMP 164

Query: 185 NNIHCNVIVP 194
           +      ++P
Sbjct: 165 SGAAAIAVLP 174

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  102 bits (254), Expect = 4e-27
 Identities = 46/208 (22%), Positives = 74/208 (35%), Gaps = 32/208 (15%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKA 69
            A++TG    +G S A+ L ++G  VVV+           S  AA  +VAE+ + + G A
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYR--------HSEGAAQRLVAELNAARAGSA 54

Query: 70  VPNYNSVVDG-------DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDV 122
           V     +          + I+  +   FGR D+++NNA            DT+       
Sbjct: 55  VLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKP 114

Query: 123 H-----------LTGAFRVSRAAWPHMKKQ-----NYGRLVMTASNSGLLGNFGQANYSA 166
                             + RA      +          +V        L   G   Y+ 
Sbjct: 115 IDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTM 174

Query: 167 AKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           AK AL GL+   ++E    +I  N + P
Sbjct: 175 AKHALGGLTRAAALELAPRHIRVNAVAP 202

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  100 bits (250), Expect = 1e-26
 Identities = 35/207 (16%), Positives = 63/207 (30%), Gaps = 28/207 (13%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
               +VTGA  G+G      L +      +      RD +      A  + +   S+   
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA--RDVE-----KATELKSIKDSRVHV 55

Query: 69  AVPNYNSVVDGDKIVQTALENFGR--IDIVINNAGILRD-KSFARISDTDWQLVQDVHLT 125
                      D  V    E  G   + ++INNAG+L    +    +        DV+ T
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 126 GAFRVSRAAWPHMKKQNYGRLV------------------MTASNSGLLGNFGQANYSAA 167
               +++   P +K                              N+     F    Y  +
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 168 KMALVGLSNTLSIEGEKNNIHCNVIVP 194
           K A+     TL+++ + +N+      P
Sbjct: 176 KAAINMFGRTLAVDLKDDNVLVVNFCP 202

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 99.9 bits (248), Expect = 2e-26
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 13/187 (6%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           +VA+VTGAG G+G++ AL L + G +V + D          +   A  V +EI   GG A
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADY---------NDATAKAVASEINQAGGHA 52

Query: 70  VPNYNSVVDGDKI---VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
           V     V D D++   V+ A +  G  D+++NNAG+        I+      V ++++ G
Sbjct: 53  VAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKG 112

Query: 127 AFRVSRAAWPHMKKQNYGRLVMT-ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
                +AA    KK+ +G  ++   S +G +GN   A YS++K A+ GL+ T + +    
Sbjct: 113 VIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPL 172

Query: 186 NIHCNVI 192
            I  N  
Sbjct: 173 GITVNGY 179

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.1 bits (246), Expect = 5e-26
 Identities = 39/224 (17%), Positives = 72/224 (32%), Gaps = 29/224 (12%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAE---RGASVVVNDLGGQRDGDGKSSKAADTVVAEI 62
                V ++TGA  G GR+ A  LA     G+ ++V+          +S      +  E+
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSA---------RSESMLRQLKEEL 53

Query: 63  RSK--GGKAVPNYNSVVDGDKI-------VQTALENFGRIDIVINNAGILRDKSFARISD 113
            ++    K V     +     +        +       +  ++INNA  L D S   ++ 
Sbjct: 54  GAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNV 113

Query: 114 TD---WQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLLGNFGQANYSAAK 168
            D         ++LT    ++       +        +V  +S   L    G   Y A K
Sbjct: 114 NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGK 173

Query: 169 MALVGLSNTLSIEGEKNNIHCNVIVPTA-ASRLTEDILPPGSYP 211
            A   L   L+ E    ++      P    + + +        P
Sbjct: 174 AARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDP 215

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 96.5 bits (239), Expect = 7e-25
 Identities = 38/197 (19%), Positives = 67/197 (34%), Gaps = 19/197 (9%)

Query: 4   QVRFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE 61
            V   G+ A+V G      LG + A  L E GA V ++           + +        
Sbjct: 3   TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ---------AERLRPEAEKL 53

Query: 62  IRSKGGKAVPNYNSVVDGD--KIVQTALENFGRIDIVINNAGILRDKS----FARISDTD 115
             + GG  +   +   D +   +     E FG +D +++       ++    +      D
Sbjct: 54  AEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQD 113

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           W L  +V       V+R A P +++   G +V     +           + AK AL    
Sbjct: 114 WLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAIAKAALEASV 171

Query: 176 NTLSIEGEKNNIHCNVI 192
             L+ E     +  N I
Sbjct: 172 RYLAYELGPKGVRVNAI 188

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 88.4 bits (218), Expect = 7e-22
 Identities = 22/201 (10%), Positives = 55/201 (27%), Gaps = 22/201 (10%)

Query: 6   RFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
              G+  +VTG      +    A  +   GA +               +      V E  
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ----------NDKLKGRVEEFA 51

Query: 64  SKGGKA---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGI-----LRDKSFARISDTD 115
           ++ G       +       D +     + + + D  +++ G      L       ++   
Sbjct: 52  AQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREG 111

Query: 116 WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLS 175
           +++  D+       +++A    +   +   L+  +                AK +L    
Sbjct: 112 FKIAHDISSYSFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANV 169

Query: 176 NTLSIEGEKNNIHCNVIVPTA 196
             ++       +  N I    
Sbjct: 170 RYMANAMGPEGVRVNAISAGP 190

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 79.9 bits (196), Expect = 6e-19
 Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 18/186 (9%)

Query: 9   GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK 68
           G+V IV G    LG +      + G +V+  DL      D       +    E       
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTE------- 54

Query: 69  AVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGA 127
                            +     ++D V   AG      + ++    +  L+    +  +
Sbjct: 55  -------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSS 107

Query: 128 FRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNI 187
              ++        +  G L +T + + +        Y  AK A+  L+++L+ +      
Sbjct: 108 AIAAK--LATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD 165

Query: 188 HCNVIV 193
           +  V+ 
Sbjct: 166 NSAVLT 171

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 78.2 bits (191), Expect = 4e-18
 Identities = 27/208 (12%), Positives = 61/208 (29%), Gaps = 33/208 (15%)

Query: 10  RVAIVTGAGAGLGRSYA---LLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG 66
              ++TG   GLG       L L +    +               ++     + ++    
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR----------NREQAKELEDLAKNH 52

Query: 67  GKAVPNYNSVVDGDKI-----VQTALENFGRIDIVINNA-GILRDKSFARISDTDWQLVQ 120
                    + + D           +     ++++ NNA    +      +   +     
Sbjct: 53  SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTL 112

Query: 121 DVHLTGAFRVSRAAWPHMKKQ-----------NYGRLVMTASNSGLLGNF---GQANYSA 166
             +      +++A  P +KK                ++  +S  G +      G   Y  
Sbjct: 113 QTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRT 172

Query: 167 AKMALVGLSNTLSIEGEKNNIHCNVIVP 194
           +K AL   + +LS++     I C  + P
Sbjct: 173 SKSALNAATKSLSVDLYPQRIMCVSLHP 200

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 71.9 bits (175), Expect = 8e-16
 Identities = 24/202 (11%), Positives = 56/202 (27%), Gaps = 43/202 (21%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
            + +++G   G+G +   +L   G  +V  D+                V+A++ +  G+ 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR------------DAEVIADLSTAEGRK 49

Query: 70  VPNYNSVVDGDKIVQTALENFGRIDIVINNAGI-LRDKSFARISDTD------------- 115
                       I     +    +D ++  AG+  + K    +   +             
Sbjct: 50  ----------QAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLP 99

Query: 116 ------WQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-QANYSAAK 168
                       +    +  ++    P       G      +     G  G    Y+ +K
Sbjct: 100 ALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK 159

Query: 169 MALVGLSNTLSIEGEKNNIHCN 190
            AL       +    +  +  N
Sbjct: 160 NALTVAVRKRAAAWGEAGVRLN 181

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 71.6 bits (174), Expect = 1e-15
 Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 49/223 (21%)

Query: 11  VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV 70
           VA+VTGA   LGRS A  L   G +V ++          +S+  A+ + A + ++   + 
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLH--------YHRSAAEANALSATLNARRPNSA 55

Query: 71  ---------------------PNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFA 109
                                          ++V     ++GR D+++NNA         
Sbjct: 56  ITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL 115

Query: 110 RISDTDWQLVQ--------------DVHLTGAFRVSRAAW------PHMKKQNYGRLVMT 149
           R  +   +                   +    + + +A        P   +     ++  
Sbjct: 116 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 175

Query: 150 ASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVI 192
                     G   Y+ AK AL GL+ + ++E     I  N +
Sbjct: 176 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGV 218

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 69.3 bits (168), Expect = 4e-15
 Identities = 35/202 (17%), Positives = 62/202 (30%), Gaps = 15/202 (7%)

Query: 10  RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA 69
           RVA++ G G  LG+  AL LA  G  +VV              + A+   AE R   G A
Sbjct: 2   RVALLGGTG-NLGKGLALRLATLGHEIVVGSR---------REEKAEAKAAEYRRIAGDA 51

Query: 70  ---VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTG 126
                      +   I    +     ID   +   ILR+K          +  +    + 
Sbjct: 52  SITGMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSS 111

Query: 127 AFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNN 186
               +      ++ +     + T   +       + ++          S  + +      
Sbjct: 112 ERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEI 171

Query: 187 IHCNVI--VPTAASRLTEDILP 206
                +   P + SRL E + P
Sbjct: 172 DGLRPLDAGPLSNSRLVESLTP 193

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 67.6 bits (164), Expect = 1e-14
 Identities = 21/177 (11%), Positives = 38/177 (21%), Gaps = 20/177 (11%)

Query: 6   RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK 65
              G+ A+V      +G   A LL                +G            A+  + 
Sbjct: 20  SVKGKKAVVLAGTGPVGMRSAALL--------------AGEGAEVVLCGRKLDKAQAAAD 65

Query: 66  GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
                   N          +  E       V     I        +    WQ    + + 
Sbjct: 66  SVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI----GLELLPQAAWQNESSIEIV 121

Query: 126 GAFR-VSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIE 181
             +          +   + G+        G LG  G       +  +  L  +    
Sbjct: 122 ADYNAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFESSEGV 177

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 67.8 bits (164), Expect = 3e-14
 Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 17/198 (8%)

Query: 6   RFDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
              G+  ++ G      +    A     +GA++    L          +++ +  V  I 
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL----------NESLEKRVRPIA 51

Query: 64  SKGGKAVP---NYNSVVDGDKIVQTALENFGRIDI-VINNAGILRDKSFARISDTDWQLV 119
            +         + +       +  +  ++ G +D  V + A   ++     + +T     
Sbjct: 52  QELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAF 111

Query: 120 QDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY-SAAKMALVGLSNTL 178
                   + +           N G  V+T S  G        N    AK AL      L
Sbjct: 112 NTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYL 171

Query: 179 SIEGEKNNIHCNVIVPTA 196
           +++  K++I  N +    
Sbjct: 172 AVDLGKHHIRVNALSAGP 189

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 62.7 bits (151), Expect = 2e-12
 Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 15/191 (7%)

Query: 8   DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG 67
                +VTG   G+G   A  LA RGA  ++  L  +   D   +  A  +VAE+ + G 
Sbjct: 8   PTGTVLVTGGTGGVGGQIARWLARRGAPHLL--LVSRSGPD---ADGAGELVAELEALGA 62

Query: 68  KAVPNYNSVVDGDKIVQTAL--ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLT 125
           +       V D + + +      +   +  V + A  L D +   ++    +      + 
Sbjct: 63  RTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVL 122

Query: 126 GAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKN 185
           GA  +                 + +S +   G  G   Y+     L GL+     +    
Sbjct: 123 GARNLHELTRELDLTAFV----LFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSD---- 174

Query: 186 NIHCNVIVPTA 196
            +    +    
Sbjct: 175 GLPATAVAWGT 185

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.1 bits (133), Expect = 5e-10
 Identities = 26/215 (12%), Positives = 60/215 (27%), Gaps = 30/215 (13%)

Query: 8   DGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDG----------DGKSSKAA 55
           +  +  + G G   G G   A  L++R   ++        +           D       
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 56  DTVVAEIRSKGGKAVPNYNSVVDGD----------------KIVQTALENFGRIDIVINN 99
           D  +  +      A  +  + +D +                 +     + +G+I++++++
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 100 AG--ILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG 157
                   K     S   +             + +     MK Q+    +   ++  ++ 
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVI 192
            +G    SA               G   NI  N I
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTI 215

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 54.0 bits (128), Expect = 2e-09
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 15/196 (7%)

Query: 6   RFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR 63
             DG+  +V+G      +    A +  E+GA +V+              +    +   + 
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF--------DRLRLIQRITDRLP 54

Query: 64  SKGGKAVPNYNSV---VDGDKIVQTALENFGRIDIVINNAGILRDK--SFARISDTDWQL 118
           +K      +  +          V  A+    ++D V+++ G +           D  +  
Sbjct: 55  AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYAD 114

Query: 119 VQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTL 178
           V       A+  +  A   +   N G  ++                + AK AL  ++  +
Sbjct: 115 VSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFV 174

Query: 179 SIEGEKNNIHCNVIVP 194
           + E  K  +  N++  
Sbjct: 175 AREAGKYGVRSNLVAA 190

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 52.8 bits (125), Expect = 5e-09
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 1  MPEQVRFDGRVAIVTGAG--AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTV 58
          +P  +   G+ A + G     G G + A  LA  GA ++V       +    S +     
Sbjct: 2  LP--IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFD 59

Query: 59 VAEIRSKGGKA 69
           + +   G   
Sbjct: 60 QSRVLPDGSLM 70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	223
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.98
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.98
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.96
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.78
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.76
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.71
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.69
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.69
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.66
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.65
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.65
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.64
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.63
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.62
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.59
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.58
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.57
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.56
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.55
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.5
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.5
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.49
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.48
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.37
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.29
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.21
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.21
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.2
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.1
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.07
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.0
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.13
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.07
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.06
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.06
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.98
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.93
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.85
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.79
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.76
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.75
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.7
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.7
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.62
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.57
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.55
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.51
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.45
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.44
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.43
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.43
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.39
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.36
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.35
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.33
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.3
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.25
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.24
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.2
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.18
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.15
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.15
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.11
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.1
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.1
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.1
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.06
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.05
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.04
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.0
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.97
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.88
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.84
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.81
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.81
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.81
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.76
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.73
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.71
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.7
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.68
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.61
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.58
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.56
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.54
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.48
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.47
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.45
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.39
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.38
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.27
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.27
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.26
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.25
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.21
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.16
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.14
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.11
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.08
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.03
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.02
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.0
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.91
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.9
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.89
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.8
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.78
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.76
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.69
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.68
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.64
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.58
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.51
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.44
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.43
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.4
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.36
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.35
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.29
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.23
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.18
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.12
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	95.04
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.97
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.96
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.92
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.83
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.79
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.7
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.68
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.49
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.48
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.04
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.04
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.03
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.02
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.93
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.92
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.8
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.74
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.73
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.7
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.69
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	93.64
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.58
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.51
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.46
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.46
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.44
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.25
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.24
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.21
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.11
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.09
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.08
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.04
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.01
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.0
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.63
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.43
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.17
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.94
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.85
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.66
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.65
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.61
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.6
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.57
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.52
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.47
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.46
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.4
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	91.39
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	91.29
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.22
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.16
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.07
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.91
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.86
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	90.68
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.59
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.27
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.1
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	90.04
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.89
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.56
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.25
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.19
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.04
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.03
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	88.6
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	88.49
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	88.35
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	88.25
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.08
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	87.9
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.85
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	87.8
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	87.79
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.77
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	87.32
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.29
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	87.21
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	87.03
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	86.73
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.45
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	86.4
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	86.31
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.68
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	85.64
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	85.58
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	85.51
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	85.19
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	85.1
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	84.94
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.92
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	84.64
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.27
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.22
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.07
d1ko7a2	169	HPr kinase HprK C-terminal domain {Staphylococcus	84.02
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.96
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.56
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	83.5
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.35
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	83.13
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	82.9
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	82.49
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.45
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.24
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	81.67
d1kkma_	176	HPr kinase HprK C-terminal domain {Lactobacillus c	81.5
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	81.41
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.2
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	81.19
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	81.19
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	81.08
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	81.04
d1knxa2	177	HPr kinase HprK C-terminal domain {Mycoplasma pneu	80.98
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.69
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	80.64
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	80.46
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	80.28
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	80.17

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.2e-49  Score=304.97  Aligned_cols=192  Identities=34%  Similarity=0.576  Sum_probs=181.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++..+...+.+|++|.+++++++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r---------~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   71 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTAT---------SENGAQAISDYLGANGKGLMLNVTDPASIESVLEK   71 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhh
Confidence            589999999999999999999999999999999988         78888888888877777778899999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+++|++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||.++..+.++..+|+
T Consensus        72 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~  151 (243)
T d1q7ba_          72 IRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYA  151 (243)
T ss_dssp             HHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             hhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHH
Confidence            99999999999999999988999999999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +||+|+.+|+|+|+.|++++|||||+|+||++ |++.....+
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~  193 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSD  193 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhh
Confidence            99999999999999999999999999999999 887766543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=7.5e-48  Score=300.28  Aligned_cols=193  Identities=27%  Similarity=0.371  Sum_probs=180.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+||++|||||++|||+++|++|+++|++|++++|         +++++++..+++......+.+|+++.+++++++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   72 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---------LDEEGAATARELGDAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988         77777777777766555677899999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++..+|+
T Consensus        73 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~  152 (254)
T d1hdca_          73 AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYG  152 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHH
Confidence            99999999999999999988999999999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      +||+|+.+|+|+|+.|++++|||||+|+||+| |++..+..++
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~  195 (254)
T d1hdca_         153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR  195 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH
Confidence            99999999999999999999999999999999 8887765443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=8.4e-48  Score=298.32  Aligned_cols=190  Identities=30%  Similarity=0.465  Sum_probs=178.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .|+||++|||||++|||+++|+.|+++|++|++++|         ++++++++.+++......+.+|++|.+++++++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   73 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---------LDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDT   73 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHH
Confidence            478999999999999999999999999999999988         77788888888876666677899999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.++++++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||..+..+.++..+|+
T Consensus        74 ~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~  153 (244)
T d1nffa_          74 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYT  153 (244)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchh
Confidence            99999999999999999988999999999999999999999999999999999999889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++|+|+.+|+|+|+.|++++|||||+|+||++ |++.+..
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  193 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV  193 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh
Confidence            99999999999999999999999999999999 7776543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.9e-47  Score=304.99  Aligned_cols=203  Identities=70%  Similarity=1.145  Sum_probs=191.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +|+|+||++|||||++|||+++|+.|+++|++|++.+|+.......++....++..+++...+.....|..|.++.++.+
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence            46899999999999999999999999999999999999877666677888888999999998888899999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+.+++|++|+||||||+...+++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||.++..+.++..+
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~  161 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQAN  161 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHH
Confidence            99999999999999999999999999999999999999999999999999999999988899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcccccccCCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASRLTEDILP  206 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~~~~~~~~  206 (223)
                      |++||+|+.+|+++|+.|++++||+||+|+||++++++....+
T Consensus       162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~  204 (302)
T d1gz6a_         162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP  204 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc
Confidence            9999999999999999999999999999999999777666554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=5e-47  Score=294.97  Aligned_cols=194  Identities=25%  Similarity=0.413  Sum_probs=165.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.        ....+...++...+...+.+|++|.+++++++++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~--------~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~   73 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--------APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ   73 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc--------hHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            58999999999999999999999999999999998831        1222222222222222346699999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++..+|+
T Consensus        74 ~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  153 (247)
T d2ew8a1          74 VISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYI  153 (247)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccch
Confidence            99999999999999999988999999999999999999999999999999999999889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      +||+|+.+|+|+|+.|++++|||||+|+||+| |++.+....+
T Consensus       154 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~  196 (247)
T d2ew8a1         154 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS  196 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------
T ss_pred             hhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc
Confidence            99999999999999999999999999999999 8887765443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-47  Score=298.15  Aligned_cols=195  Identities=31%  Similarity=0.495  Sum_probs=180.3

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   80 (223)
                      +++|+||++|||||++|||+++|++|+++|++|++++|         +++.++++.+++++.+..   +.+|++|.++++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~   76 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI---------NADAANHVVDEIQQLGGQAFACRCDITSEQELS   76 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHH
Confidence            57789999999999999999999999999999999988         888888888899877654   456888889999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      ++++++.+++|++|+||||||.....++ +.+.++|++++++|+.+++.++|.++|+|.+++.|+||++||.++..+.++
T Consensus        77 ~~~~~~~~~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~  155 (255)
T d1fmca_          77 ALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN  155 (255)
T ss_dssp             HHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHHHHcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc
Confidence            9999999999999999999998877665 789999999999999999999999999999998899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPPG  208 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~~  208 (223)
                      ..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++..+..+++
T Consensus       156 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e  204 (255)
T d1fmca_         156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE  204 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH
T ss_pred             cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH
Confidence            9999999999999999999999999999999999999 88887766543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.4e-46  Score=293.12  Aligned_cols=192  Identities=34%  Similarity=0.538  Sum_probs=176.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      ++++||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++++.+..   +.+|++|.+++++
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r---------~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~   76 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISR---------TQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISE   76 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES---------SHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            5688999999999999999999999999999999988         888888888888876654   3568899999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++.
T Consensus        77 ~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~  156 (251)
T d2c07a1          77 VINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ  156 (251)
T ss_dssp             HHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC
T ss_pred             HHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC
Confidence            99999999999999999999998899999999999999999999999999999999999988999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++..+..
T Consensus       157 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~  201 (251)
T d2c07a1         157 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS  201 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC
Confidence            999999999999999999999999999999999999 87776543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-46  Score=294.07  Aligned_cols=196  Identities=24%  Similarity=0.376  Sum_probs=158.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   80 (223)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|         +++++++..+++.+.+..+   .+|+++.++++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r---------~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   73 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR---------NEYELNECLSKWQKKGFQVTGSVCDASLRPERE   73 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCceEEEeccCCCHHHHH
Confidence            46789999999999999999999999999999999988         8888888888888766544   45888888899


Q ss_pred             HHHHHHHHhc-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++++++.+++ |++|+||||||.....++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||..+..+.+
T Consensus        74 ~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~  153 (259)
T d1xq1a_          74 KLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS  153 (259)
T ss_dssp             HHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------
T ss_pred             HHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccc
Confidence            9999999998 789999999999988999999999999999999999999999999999998889999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPPG  208 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~~  208 (223)
                      +..+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++..+..+++
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~  203 (259)
T d1xq1a_         154 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE  203 (259)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------
T ss_pred             ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH
Confidence            99999999999999999999999999999999999999 88887766544

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.5e-46  Score=293.36  Aligned_cols=191  Identities=32%  Similarity=0.541  Sum_probs=169.8

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccchHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVDGDKI   82 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~   82 (223)
                      |+||++|||||++|||+++|+.|+++|++|++++|+        +...++++.+++.+. +.   .+.+|++|.++++++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~--------~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   73 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG--------DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGL   73 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS--------CHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC--------cHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            689999999999999999999999999999999872        345566666666543 22   345699999999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      ++++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.++..
T Consensus        74 ~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~  153 (260)
T d1x1ta1          74 VDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKS  153 (260)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcc
Confidence            99999999999999999999988999999999999999999999999999999999998889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +|++||+|+.+|+|+|+.|++++||+||+|+||+| |++.++..
T Consensus       154 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (260)
T d1x1ta1         154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI  197 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             hhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh
Confidence            99999999999999999999999999999999999 88877654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.2e-46  Score=290.95  Aligned_cols=192  Identities=28%  Similarity=0.405  Sum_probs=174.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCc---cccccCCccchH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGK---AVPNYNSVVDGD   80 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~   80 (223)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|         +.+++++..+++.+. +..   +.+|++|.++++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~   71 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR---------NLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVK   71 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHH
Confidence            4689999999999999999999999999999999988         777777777776543 332   456999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc-cccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG-LLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~  159 (223)
                      ++++++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||+++|..+ ..+.+
T Consensus        72 ~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~  151 (251)
T d1vl8a_          72 KLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP  151 (251)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCc
Confidence            99999999999999999999998889999999999999999999999999999999999988899999999766 45778


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +..+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++.....
T Consensus       152 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~  198 (251)
T d1vl8a_         152 NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF  198 (251)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH
T ss_pred             cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc
Confidence            89999999999999999999999999999999999999 88776554

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=5.5e-46  Score=290.96  Aligned_cols=193  Identities=30%  Similarity=0.410  Sum_probs=179.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   81 (223)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|         +++.+++..+++++.+...   .+|++|.+++++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~   74 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSR---------NQKELNDCLTQWRSKGFKVEASVCDLSSRSERQE   74 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHH
Confidence            5789999999999999999999999999999999988         8888888888888776544   468888888999


Q ss_pred             HHHHHHHhcC-CccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENFG-RIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.++++ ++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++
T Consensus        75 ~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~  154 (259)
T d2ae2a_          75 LMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY  154 (259)
T ss_dssp             HHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc
Confidence            9999999987 799999999999889999999999999999999999999999999999988899999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ..+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++.+....
T Consensus       155 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  201 (259)
T d2ae2a_         155 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ  201 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhh
Confidence            9999999999999999999999999999999999999 887765543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=6.9e-46  Score=290.13  Aligned_cols=190  Identities=32%  Similarity=0.469  Sum_probs=174.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCccchH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVVDGD   80 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   80 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +.+.+++..+++.+...     .+.+|++|.++++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~   71 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV---------SSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVE   71 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHH
Confidence            478999999999999999999999999999999988         77778777777765432     2356999999999


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||..+..+.+
T Consensus        72 ~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~  151 (258)
T d1iy8a_          72 AYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG  151 (258)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS
T ss_pred             HHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC
Confidence            999999999999999999999764 4678899999999999999999999999999999998889999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +..+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++..+.
T Consensus       152 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~  197 (258)
T d1iy8a_         152 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS  197 (258)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHH
Confidence            99999999999999999999999999999999999999 8776544

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3e-46  Score=292.07  Aligned_cols=190  Identities=25%  Similarity=0.410  Sum_probs=175.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|         +.+.++++.+++......+.+|++|.++++++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~   71 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADI---------NLEAARATAAEIGPAACAIALDVTDQASIDRCVA   71 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEES---------CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHH
Confidence            3689999999999999999999999999999999988         7777877777775555556779999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-QNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|.+ .+.|+||++||.++..+.++..+
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  151 (256)
T d1k2wa_          72 ELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGV  151 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccc
Confidence            99999999999999999998899999999999999999999999999999998655 45689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |++||+|+.+|+|+|+.|++++|||||+|+||++ |++.+.
T Consensus       152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~  192 (256)
T d1k2wa_         152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG  192 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH
T ss_pred             hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh
Confidence            9999999999999999999999999999999999 877543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.1e-46  Score=292.24  Aligned_cols=193  Identities=26%  Similarity=0.383  Sum_probs=178.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++..+...+.+|++|..++++++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~---------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~   73 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---------NEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAA   73 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS---------CHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHH
Confidence            689999999999999999999999999999999987         77888888888866666667899999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++ |+||++||..+..+.++..+|+
T Consensus        74 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~  152 (253)
T d1hxha_          74 VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYS  152 (253)
T ss_dssp             HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCcccccccc
Confidence            999999999999999998889999999999999999999999999999999998654 9999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCC--CCeEEEEEeCCCc-ccccccCCCCC
Q psy16220        166 AAKMALVGLSNTLSIEGEK--NNIHCNVIVPTAA-SRLTEDILPPG  208 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~--~~i~v~~v~Pg~v-t~~~~~~~~~~  208 (223)
                      +||+|+.+|+|+++.|+++  +|||||+|+||+| |++.....++.
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~  198 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG  198 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch
Confidence            9999999999999999987  4699999999999 88877666543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.1e-45  Score=287.88  Aligned_cols=193  Identities=24%  Similarity=0.411  Sum_probs=175.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   83 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +.+.+++..+++...+.  .+.+|++|.+++++++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR---------HSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHH
Confidence            589999999999999999999999999999999988         77777777777754322  3456999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-cEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~  162 (223)
                      +++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|++++.| +||++||..+..+.++..
T Consensus        74 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~  153 (251)
T d1zk4a1          74 DATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLG  153 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCch
Confidence            9999999999999999999998999999999999999999999999999999999988765 899999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhh--hCCCCeEEEEEeCCCc-ccccccCCCC
Q psy16220        163 NYSAAKMALVGLSNTLSIE--GEKNNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e--~~~~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      +|+++|+|+.+|+++|+.|  ++++|||||+|+||+| |++.++...+
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~  201 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA  201 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH
Confidence            9999999999999999999  5689999999999999 8887776543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=3.4e-45  Score=283.31  Aligned_cols=187  Identities=22%  Similarity=0.416  Sum_probs=174.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCe-------EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccch
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGAS-------VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDG   79 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~-------vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   79 (223)
                      +++|||||++|||+++|+.|+++|++       |++.+|         +.+.++++.+++++.+..   +.+|++|.+++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r---------~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v   72 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR---------TAADLEKISLECRAEGALTDTITADISDMADV   72 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES---------CHHHHHHHHHHHHTTTCEEEEEECCTTSHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeC---------CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            57999999999999999999999998       888877         888888888888876654   35699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      +++++++.++||++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.|
T Consensus        73 ~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~  152 (240)
T d2bd0a1          73 RRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR  152 (240)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC
Confidence            99999999999999999999999988999999999999999999999999999999999998889999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +..+|++||+|+.+|+++|+.|++++||+||+|+||+| |+++.+..
T Consensus       153 ~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~  199 (240)
T d2bd0a1         153 HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD  199 (240)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC
Confidence            99999999999999999999999999999999999999 88876654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-45  Score=287.15  Aligned_cols=186  Identities=30%  Similarity=0.429  Sum_probs=169.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      |+||++|||||++|||+++|+.|+++|++|++++|         +++.. +..+++.  ...+.+|++|.++++++++++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~---------~~~~~-~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~   70 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL---------RPEGK-EVAEAIG--GAFFQVDLEDERERVRFVEEA   70 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------STTHH-HHHHHHT--CEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHH-HHHHHcC--CeEEEEeCCCHHHHHHHHHHH
Confidence            78999999999999999999999999999999988         33322 2233332  234567999999999999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .+++|++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||..+..+.++..+|++
T Consensus        71 ~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  150 (248)
T d2d1ya1          71 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNA  150 (248)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHH
T ss_pred             HHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHH
Confidence            99999999999999999889999999999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +|+|+.+|+|+|+.|++++||+||+|+||+| |++..+.
T Consensus       151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~  189 (248)
T d2d1ya1         151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA  189 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHH
Confidence            9999999999999999999999999999999 8776544

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.1e-45  Score=286.73  Aligned_cols=192  Identities=31%  Similarity=0.433  Sum_probs=174.8

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   81 (223)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+        ++...+++.+++++.+..   +.+|++|.+++++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~--------~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~   74 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS--------KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVIN   74 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--------cHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            36899999999999999999999999999999999882        345677777788776654   4569999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-cEEEEecCcccccCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYG-RLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.| +||++||.++..+.++
T Consensus        75 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~  154 (261)
T d1geea_          75 LVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL  154 (261)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc
Confidence            999999999999999999999988999999999999999999999999999999999887655 5899999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..+|++||+|+.+|+|+|+.|++++||+||+|+||+| |++..+.
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  199 (261)
T d1geea_         155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK  199 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred             ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhh
Confidence            9999999999999999999999999999999999999 8777654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.5e-45  Score=288.80  Aligned_cols=187  Identities=34%  Similarity=0.497  Sum_probs=174.6

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++++.+..   +.+|++|.++++++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   72 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM---------NREALEKAEASVREKGVEARSYVCDVTSEEAVIGT   72 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            589999999999999999999999999999999988         788888888888876654   35688888999999


Q ss_pred             HHHHHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      ++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.++.
T Consensus        73 ~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~  152 (260)
T d1zema1          73 VDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM  152 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB
T ss_pred             HHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch
Confidence            9999999999999999999874 478999999999999999999999999999999999888999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      .+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++.
T Consensus       153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~  193 (260)
T d1zema1         153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFM  193 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcch
Confidence            999999999999999999999999999999999999 7765

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.4e-45  Score=287.29  Aligned_cols=186  Identities=31%  Similarity=0.480  Sum_probs=173.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   85 (223)
                      ||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++++.+..+   .+|++|.+++++++++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~   72 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCAR---------GEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA   72 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            799999999999999999999999999999988         8888888888988776543   4688999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--HHhcCCCcEEEEecCcccccCCCCch
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPH--MKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.++||++|+||||||....+++.+.+.++|++++++|+.++++++|.++|+  |.+++.|+||++||..+..+.++..+
T Consensus        73 ~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~  152 (257)
T d2rhca1          73 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP  152 (257)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchh
Confidence            9999999999999999998899999999999999999999999999999997  55666689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+| |++..+
T Consensus       153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~  193 (257)
T d2rhca1         153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS  193 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHH
Confidence            9999999999999999999999999999999999 877654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.8e-45  Score=283.39  Aligned_cols=188  Identities=34%  Similarity=0.540  Sum_probs=170.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|         +++.+++..+++.  ...+.+|++|.++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~l~~~~~~~~--~~~~~~Dv~~~~~v~~~~~   69 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI---------EEGPLREAAEAVG--AHPVVMDVADPASVERGFA   69 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHcC--CeEEEEecCCHHHHHHHHH
Confidence            4689999999999999999999999999999999988         6677666655553  2345679999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++.+.++++|| .+..+.++..+|
T Consensus        70 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y  148 (242)
T d1ulsa_          70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANY  148 (242)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHH
T ss_pred             HHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcch
Confidence            9999999999999999999889999999999999999999999999999999999988777777776 567889999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +++|+|+.+|+|+|+.|++++|||||+|+||+| |++..+.
T Consensus       149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~  189 (242)
T d1ulsa_         149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV  189 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC
Confidence            999999999999999999999999999999999 7777654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.9e-45  Score=284.33  Aligned_cols=188  Identities=40%  Similarity=0.634  Sum_probs=173.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   86 (223)
                      +++|||||++|||+++|++|+++|++|++.++        ++++..+++.+++++.+..   +.+|++|.++++++++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~--------~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   73 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYA--------RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTA   73 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES--------SCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC--------CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            58999999999999999999999999999764        2666777778888776554   456999999999999999


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .+++|++|+||||||....+++.+.+.++|++++++|+.+++.++|.++|+|++++.|+||++||.++..+.++..+|++
T Consensus        74 ~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a  153 (244)
T d1edoa_          74 IDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAA  153 (244)
T ss_dssp             HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHH
Confidence            99999999999999999889999999999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ||+|+.+|+|+|+.|++++|||||+|+||++ |++..+..
T Consensus       154 sKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~  193 (244)
T d1edoa_         154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG  193 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred             HHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh
Confidence            9999999999999999999999999999999 88776653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.7e-45  Score=284.45  Aligned_cols=183  Identities=29%  Similarity=0.458  Sum_probs=159.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+...         .+        ....+.+|++|.++++++++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~---------~~--------~~~~~~~Dv~~~~~v~~~~~   65 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA---------PK--------GLFGVEVDVTDSDAVDRAFT   65 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC---------CT--------TSEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch---------hc--------CceEEEEecCCHHHHHHHHH
Confidence            47899999999999999999999999999999999984332         11        12346789999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      ++.++++++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+.++..+|
T Consensus        66 ~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y  145 (237)
T d1uzma1          66 AVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANY  145 (237)
T ss_dssp             HHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHH
T ss_pred             HHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHH
Confidence            99999999999999999988899999999999999999999999999999999999998999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+| |++....
T Consensus       146 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  186 (237)
T d1uzma1         146 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL  186 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc
Confidence            999999999999999999999999999999999 8777654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-45  Score=285.01  Aligned_cols=188  Identities=24%  Similarity=0.442  Sum_probs=170.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++.. ...+.+|++|.+++++++++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~~~~~~~~~~~-~~~~~~Dvs~~~~v~~~~~~   72 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---------DESGGRALEQELPG-AVFILCDVTQEDDVKTLVSE   72 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHCTT-EEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHhcCC-CeEEEccCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988         66666666655532 23456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.++||++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|+|++++ |+||++||..+..+.++..+|
T Consensus        73 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y  151 (250)
T d1ydea1          73 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPY  151 (250)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchh
Confidence            9999999999999999764 46788999999999999999999999999999998765 999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      +++|+|+.+|+|+|+.|++++|||||+|+||+| |++.++.
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~  192 (250)
T d1ydea1         152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL  192 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHH
Confidence            999999999999999999999999999999999 8876654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.6e-44  Score=282.22  Aligned_cols=186  Identities=28%  Similarity=0.412  Sum_probs=172.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   85 (223)
                      .|++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++++.+..+   .+|++|.+++++++++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~   71 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADY---------NDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ   71 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            378999999999999999999999999999988         8888888888888776543   5699999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.++||++|+||||||....+++.+.+.++|++++++|+.+++++++.++|+|.+++ .++||++||.++..+.++..+|
T Consensus        72 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y  151 (255)
T d1gega_          72 ARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVY  151 (255)
T ss_dssp             HHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccc
Confidence            999999999999999998889999999999999999999999999999999877654 5789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|+|+.+|+|+|+.|++++|||||+|+||+| |++..+
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~  191 (255)
T d1gega_         152 SSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE  191 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred             hhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhh
Confidence            999999999999999999999999999999999 877654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-45  Score=281.79  Aligned_cols=191  Identities=24%  Similarity=0.366  Sum_probs=176.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   81 (223)
                      .+++||++|||||++|||+++|++|+++|++|++.+|         +.++++++.+++.+.+..+   .+|++|.++++.
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r---------~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~   73 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI---------NKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYS   73 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Confidence            4689999999999999999999999999999999988         8888999988988766543   568888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++.+.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||++||.++..+.|++
T Consensus        74 ~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~  153 (244)
T d1yb1a_          74 SAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFL  153 (244)
T ss_dssp             HHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHH
T ss_pred             HHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCc
Confidence            99999999999999999999998888999999999999999999999999999999999988999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCC---CCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEK---NNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~---~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .+|++||+|+.+|+++|+.|+++   +||+||+|+||+| |++.++.
T Consensus       154 ~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~  200 (244)
T d1yb1a_         154 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP  200 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc
Confidence            99999999999999999999875   5899999999999 8776553

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=8.4e-44  Score=280.06  Aligned_cols=192  Identities=30%  Similarity=0.450  Sum_probs=173.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   83 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++...+.  .+.+|++|.+++++++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~   73 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI---------ADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLV   73 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHH
Confidence            689999999999999999999999999999999988         77888888888765433  2456999999999999


Q ss_pred             HHHHHhcCCccEEEeccCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCC
Q psy16220         84 QTALENFGRIDIVINNAGILRDK--SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQ  161 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  161 (223)
                      +++.+++|++|+||||||.....  .+.+.+.++|++++++|+.+++.++|.++|+|.+++.|+||++||..+..+.++.
T Consensus        74 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  153 (268)
T d2bgka1          74 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV  153 (268)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS
T ss_pred             HHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc
Confidence            99999999999999999987554  4778999999999999999999999999999999888999999999998877665


Q ss_pred             -chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        162 -ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       162 -~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                       .+|++||+|+.+|+|+|+.|++++|||||+|+||++ |++..+...
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  200 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG  200 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS
T ss_pred             ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhc
Confidence             589999999999999999999999999999999999 888776654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-44  Score=280.32  Aligned_cols=189  Identities=23%  Similarity=0.319  Sum_probs=165.0

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++.|+||++|||||++|||+++|+.|+++|++|++++|         ++++++++.+++.. ...+..|++|.+++    
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r---------~~~~l~~~~~~~~~-~~~~~~Dv~d~~~v----   67 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR---------TQADLDSLVRECPG-IEPVCVDLGDWEAT----   67 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHSTT-CEEEECCTTCHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC---------CHHHHHHHHHhcCC-CeEEEEeCCCHHHH----
Confidence            56799999999999999999999999999999999988         77777766655532 22334566665544    


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHH-hcCCCcEEEEecCcccccCCCCc
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMK-KQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      +++.++++++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|.|. +.+.|+||++||..+..+.++..
T Consensus        68 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~  147 (244)
T d1pr9a_          68 ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHS  147 (244)
T ss_dssp             HHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchh
Confidence            45567789999999999999889999999999999999999999999999999754 45679999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      +|++||+|+.+|+|+|+.|++++|||||+|+||+| |++......
T Consensus       148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~  192 (244)
T d1pr9a_         148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS  192 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc
Confidence            99999999999999999999999999999999999 888766554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.7e-43  Score=276.52  Aligned_cols=194  Identities=28%  Similarity=0.433  Sum_probs=173.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDK   81 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   81 (223)
                      ++++||++|||||++|||+++|+.|+++|++|++++|         ++.++++..+++.+.+..+   .+|+++.+++++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r---------~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~   72 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR---------NEKELDECLEIWREKGLNVEGSVCDLLSRTERDK   72 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHH
Confidence            5789999999999999999999999999999999988         7888888888888776654   458888888999


Q ss_pred             HHHHHHHhc-CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         82 IVQTALENF-GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        82 ~~~~~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +++++.+++ +++|+||||||.....++.+++.++|++++++|+.+++.+.+.++|.|.+++.|+||++||.++..+.++
T Consensus        73 ~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~  152 (258)
T d1ae1a_          73 LMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS  152 (258)
T ss_dssp             HHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence            999999998 6899999999999889999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCC
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      ..+|+++|+|+++|+|.|+.|++++|||||+|+||++ |++..+...+
T Consensus       153 ~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~  200 (258)
T d1ae1a_         153 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKK  200 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhh
Confidence            9999999999999999999999999999999999999 8887776543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.7e-43  Score=278.72  Aligned_cols=191  Identities=26%  Similarity=0.407  Sum_probs=169.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC------ccccccCCccch
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG------KAVPNYNSVVDG   79 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~   79 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++.+.+.      .+.+|++|.+++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r---------~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v   72 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR---------SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQ   72 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHH
Confidence            689999999999999999999999999999999988         88888888888876542      346699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec-Ccc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSF----ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS-NSG  154 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS-~~~  154 (223)
                      +.+++++.+++|++|+||||||.....++    .+.+.++|++++++|+.+++.+++.++|+|++++ |.+|+++| .++
T Consensus        73 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~  151 (272)
T d1xkqa_          73 DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG  151 (272)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS
T ss_pred             HHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-Cccccccchhcc
Confidence            99999999999999999999998766544    4567788999999999999999999999998775 55555554 677


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++......
T Consensus       152 ~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  204 (272)
T d1xkqa_         152 PQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGM  204 (272)
T ss_dssp             SSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTC
T ss_pred             ccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCC
Confidence            8899999999999999999999999999999999999999999 888776543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.7e-43  Score=278.08  Aligned_cols=187  Identities=27%  Similarity=0.383  Sum_probs=167.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|         ++++++++.+++......+..|+++.++++++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   71 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK---------SAERLAELETDHGDNVLGIVGDVRSLEDQKQAAS   71 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHcCCCeeEEecccccHHHHHHHHH
Confidence            4689999999999999999999999999999999988         7777777777776655566779999999999999


Q ss_pred             HHHHhcCCccEEEeccCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC
Q psy16220         85 TALENFGRIDIVINNAGILRDK-----SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF  159 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  159 (223)
                      ++.++++++|+||||||.....     ...+.+.++|++++++|+.+++.++|.++|+|++++ |+||+++|..+..+.+
T Consensus        72 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~  150 (276)
T d1bdba_          72 RCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNG  150 (276)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTS
T ss_pred             HHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCC
Confidence            9999999999999999976543     224455667999999999999999999999998765 9999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~  202 (223)
                      +..+|+++|+|+.+|+|+|+.|+++. ||||+|+||+| |++..
T Consensus       151 ~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~  193 (276)
T d1bdba_         151 GGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRG  193 (276)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCC
Confidence            99999999999999999999999975 99999999999 77654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-43  Score=278.37  Aligned_cols=190  Identities=28%  Similarity=0.423  Sum_probs=160.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC------ccccccCCccch
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG------KAVPNYNSVVDG   79 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~   79 (223)
                      +|+||++|||||++|||+++|++|+++|++|++++|         +++.++++.+++.+.+.      .+.+|++|.+++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v   72 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR---------HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ   72 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHH
Confidence            589999999999999999999999999999999988         88888888888876542      245699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecC-cc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASN-SG  154 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~-~~  154 (223)
                      +++++++.+++|++|+||||||....    .++.+.+.++|++++++|+.+++.+++.++|+|++++ |.+|+++|. ++
T Consensus        73 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~  151 (264)
T d1spxa_          73 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG  151 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS
T ss_pred             HHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeeccc
Confidence            99999999999999999999997643    3456678999999999999999999999999998775 667766665 46


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      ..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+| |++.....
T Consensus       152 ~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~  203 (264)
T d1spxa_         152 LHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG  203 (264)
T ss_dssp             SSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----
T ss_pred             cccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccC
Confidence            7899999999999999999999999999999999999999999 87776553

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.8e-43  Score=278.78  Aligned_cols=191  Identities=24%  Similarity=0.366  Sum_probs=173.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC------ccccccCCccch
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG------KAVPNYNSVVDG   79 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~   79 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         +++.++++.+++.+.+.      .+.+|++|.+++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v   71 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR---------NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQ   71 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHH
Confidence            478999999999999999999999999999999988         88888888888877643      345699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDK--SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++++.++||++|+||||||.....  ...+.+.++|++++++|+.+++.+++.++|+|++++.|+|+++||.++..+
T Consensus        72 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~  151 (274)
T d1xhla_          72 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA  151 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC
T ss_pred             HHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc
Confidence            999999999999999999999976443  445678899999999999999999999999999988889999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .++..+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++.....
T Consensus       152 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  200 (274)
T d1xhla_         152 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG  200 (274)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT
T ss_pred             CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhc
Confidence            9999999999999999999999999999999999999999 87766554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-43  Score=274.42  Aligned_cols=188  Identities=23%  Similarity=0.322  Sum_probs=163.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|         ++++++++.+++.. ...+.+|++|.+++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r---------~~~~l~~~~~~~~~-~~~~~~Dv~~~~~v----~   66 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR---------TNSDLVSLAKECPG-IEPVCVDLGDWDAT----E   66 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHSTT-CEEEECCTTCHHHH----H
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHhcCC-CeEEEEeCCCHHHH----H
Confidence            4789999999999999999999999999999999988         66666666555432 22334466655544    4


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCcEEEEecCcccccCCCCch
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-QNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      ++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|.|.+ ...|+||++||..+..+.++..+
T Consensus        67 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~  146 (242)
T d1cyda_          67 KALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLIT  146 (242)
T ss_dssp             HHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcccc
Confidence            56677899999999999988899999999999999999999999999999998654 45689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      |+++|+|+.+|+|+|+.|++++|||||+|+||++ |++..+...
T Consensus       147 Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~  190 (242)
T d1cyda_         147 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA  190 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC
T ss_pred             ccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC
Confidence            9999999999999999999999999999999999 887766543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=6.6e-43  Score=272.54  Aligned_cols=183  Identities=22%  Similarity=0.215  Sum_probs=164.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||++|||+++|+.|+++|++|++++|         +.+..+++.... ..  ...+|+.+.++++++++++.++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r---------~~~~~~~~~~~~-~~--~~~~dv~~~~~~~~~~~~~~~~~   69 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDE---------SFKQKDELEAFA-ET--YPQLKPMSEQEPAELIEAVTSAY   69 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCG---------GGGSHHHHHHHH-HH--CTTSEECCCCSHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHhhh-Cc--EEEeccCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999999987         444444443322 22  24679999999999999999999


Q ss_pred             CCccEEEeccCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhhHH
Q psy16220         91 GRIDIVINNAGILR-DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAAKM  169 (223)
Q Consensus        91 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~  169 (223)
                      |++|+||||||... .+++.+.+.++|++.+++|+.+++.++|.++|+|++++.|+||++||.++..+.++..+|++||+
T Consensus        70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKa  149 (252)
T d1zmta1          70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARA  149 (252)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccc
Confidence            99999999999764 47899999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        170 ALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       170 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |+.+|+|+|+.|++++|||||+|+||+| |++.....
T Consensus       150 al~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  186 (252)
T d1zmta1         150 GACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY  186 (252)
T ss_dssp             HHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC
T ss_pred             cHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhh
Confidence            9999999999999999999999999999 87776554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-42  Score=277.03  Aligned_cols=190  Identities=24%  Similarity=0.367  Sum_probs=172.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--------ccccccCCcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--------KAVPNYNSVV   77 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~   77 (223)
                      .|+||++|||||++|||+++|+.|+++|++|++++|         +.+++++..+++.+...        .+.+|++|.+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r---------~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~   79 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASR---------KLERLKSAADELQANLPPTKQARVIPIQCNIRNEE   79 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhhhccccCceEEEEeccCCCHH
Confidence            479999999999999999999999999999999988         78888888888875321        2456999999


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++|| ++..+
T Consensus        80 ~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~  158 (297)
T d1yxma1          80 EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAG  158 (297)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTC
T ss_pred             HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-ccccc
Confidence            99999999999999999999999998889999999999999999999999999999999999988899998866 46677


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .++...|+++|+|+.+|+|+||.|++++|||||+|+||+| |++..+..
T Consensus       159 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  207 (297)
T d1yxma1         159 FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY  207 (297)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTS
T ss_pred             ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhc
Confidence            8999999999999999999999999999999999999999 87765443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.5e-42  Score=271.78  Aligned_cols=194  Identities=26%  Similarity=0.321  Sum_probs=167.5

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccc
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVD   78 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~   78 (223)
                      ++++|+||++|||||++|||+++|+.|+++|++|++++|         +...+.+..+++.+. +.   .+.+|++|.++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~   73 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYR---------SAADAVEVTEKVGKEFGVKTKAYQCDVSNTDI   73 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES---------SCTTHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHHhCCceEEEEccCCCHHH
Confidence            457899999999999999999999999999999999998         555555555555332 32   35679999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEecCcccc-
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTASNSGLL-  156 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~-  156 (223)
                      ++++++++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|.++ ..++|++++|..... 
T Consensus        74 v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~  153 (260)
T d1h5qa_          74 VTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQII  153 (260)
T ss_dssp             HHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccc
Confidence            999999999999999999999999888999999999999999999999999999999998654 456777777755443 


Q ss_pred             ------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        157 ------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       157 ------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                            +.++..+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++.....
T Consensus       154 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~  209 (260)
T d1h5qa_         154 NQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD  209 (260)
T ss_dssp             CEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC
T ss_pred             cccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC
Confidence                  44678899999999999999999999999999999999999 88776653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-42  Score=268.79  Aligned_cols=193  Identities=26%  Similarity=0.322  Sum_probs=173.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCccc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVVD   78 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~   78 (223)
                      |-+|+||++|||||++|||+++|+.|+++|++|++++|         ++.+++++.+++++.+.     .+.+|+++.++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r---------~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~   75 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCAR---------TVGNIEELAAECKSAGYPGTLIPYRCDLSNEED   75 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCceEEEEEccCCCHHH
Confidence            34599999999999999999999999999999999988         88889999999887653     24569999999


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEEEecCcccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVMTASNSGLL  156 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~  156 (223)
                      ++++++.+.++++++|+||||||....+++.+.+.++|++.+++|+.+++.+++.++|.|++.+  .|+||++||.++..
T Consensus        76 v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~  155 (257)
T d1xg5a_          76 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR  155 (257)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcC
Confidence            9999999999999999999999999889999999999999999999999999999999998654  58999999998865


Q ss_pred             c--CCCCchhhhhHHHHHHHHHHHHhhh--CCCCeEEEEEeCCCc-ccccccCC
Q psy16220        157 G--NFGQANYSAAKMALVGLSNTLSIEG--EKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       157 ~--~~~~~~y~~sK~a~~~~~~~l~~e~--~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .  .++...|+++|+|+.+|+|+|+.|+  +++||+||+|+||++ |++..+..
T Consensus       156 ~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~  209 (257)
T d1xg5a_         156 VLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH  209 (257)
T ss_dssp             CCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT
T ss_pred             CCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC
Confidence            4  5567789999999999999999998  789999999999999 66665543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.9e-42  Score=266.03  Aligned_cols=180  Identities=24%  Similarity=0.337  Sum_probs=157.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++||++|||||++|||+++|+.|+++|++|++++|         +++.++       +.+..  +..+|..   +.++.+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r---------~~~~l~-------~~~~~--~~~~Dv~---~~~~~~   60 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR---------NEELLK-------RSGHR--YVVCDLR---KDLDLL   60 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHH-------HTCSE--EEECCTT---TCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHH-------hcCCc--EEEcchH---HHHHHH
Confidence            68999999999999999999999999999999988         443332       22221  2233332   235667


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                      .++++++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||+++|..+..+.++...|++
T Consensus        61 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~a  140 (234)
T d1o5ia_          61 FEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS  140 (234)
T ss_dssp             HHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchh
Confidence            78899999999999998888999999999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCC
Q psy16220        167 AKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPP  207 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~  207 (223)
                      +|+|+.+|+|+|+.|++++|||||+|+||++ |++..+..++
T Consensus       141 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~  182 (234)
T d1o5ia_         141 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE  182 (234)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH
Confidence            9999999999999999999999999999999 8887766543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-41  Score=264.30  Aligned_cols=183  Identities=27%  Similarity=0.410  Sum_probs=163.1

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   81 (223)
                      .+||++|||||++|||+++|++|+++|++|++++|         +.+++++..+++.+...     .+.+|++|.+++++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~   71 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW---------NLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRD   71 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHH
Confidence            37999999999999999999999999999999988         77888877777765422     24569999999999


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCcEEEEecCcccccC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN---YGRLVMTASNSGLLGN  158 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~  158 (223)
                      +++.+.+++|++|+||||||....        ++|++++++|+.+++.+++.++|+|.+++   .|+||++||.++..+.
T Consensus        72 ~~~~~~~~~G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~  143 (254)
T d2gdza1          72 TFRKVVDHFGRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV  143 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHcCCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC
Confidence            999999999999999999997543        45899999999999999999999998754   4789999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHH--HHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        159 FGQANYSAAKMALVGLSNT--LSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~--l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ++..+|++||+|+.+|+|+  |+.|++++|||||+|+||+| |+++++...
T Consensus       144 ~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~  194 (254)
T d2gdza1         144 AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK  194 (254)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccc
Confidence            9999999999999999997  78899999999999999999 888766543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.1e-41  Score=266.80  Aligned_cols=189  Identities=29%  Similarity=0.481  Sum_probs=169.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKI   82 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   82 (223)
                      +|+||++|||||++|||+++|+.|+++|++|+++++        +++...++..+++++.+..   +.+|++|.+++++.
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~--------~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~   74 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG--------SSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL   74 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--------SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcC--------CChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHH
Confidence            489999999999999999999999999999999765        2666677888888876654   35688888899999


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCCCC
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNFGQ  161 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~  161 (223)
                      ++++.+++|++|+||||||....+++.+.+.++|++++++|+.+++.+++.++|+|++.  +++++++|..+.. +.++.
T Consensus        75 ~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~  152 (259)
T d1ja9a_          75 FDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNH  152 (259)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSC
T ss_pred             HHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCc
Confidence            99999999999999999999988999999999999999999999999999999999765  6888887765544 78999


Q ss_pred             chhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        162 ANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       162 ~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ..|+++|+|+.+|+|+|+.|++++|||||+|+||++ |++.++.
T Consensus       153 ~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~  196 (259)
T d1ja9a_         153 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDEN  196 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhh
Confidence            999999999999999999999999999999999999 8776543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4.2e-42  Score=266.12  Aligned_cols=187  Identities=33%  Similarity=0.511  Sum_probs=160.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .|+||++|||||++|||+++|++|+++|++|++++|         +.+.+++..+++..+...+.+|+++.+++++++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~   72 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDR---------EERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAE   72 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999988         66666665555543333456799999999999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.+++|++|+||||||.....++.+.+.++|++++++|+.+++.++|.++|+|.+.  +.|+++|| .+..+.|+...|+
T Consensus        73 i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss-~a~~~~~~~~~Y~  149 (241)
T d2a4ka1          73 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGS-VAGLGAFGLAHYA  149 (241)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECC-CTTCCHHHHHHHH
T ss_pred             HHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc--cceeeccc-cccccccCccccc
Confidence            99999999999999999888999999999999999999999999999999998765  45555544 5556668899999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      ++|+|+++|+|+|+.|++++|||||||+||++ |++..+.
T Consensus       150 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~  189 (241)
T d2a4ka1         150 AGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL  189 (241)
T ss_dssp             HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS
T ss_pred             hhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh
Confidence            99999999999999999999999999999999 7776544

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.2e-41  Score=265.44  Aligned_cols=183  Identities=21%  Similarity=0.270  Sum_probs=154.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccC-Cccc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYN-SVVD   78 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~   78 (223)
                      |+|+||++|||||++|||+++|++|+++|++|++++|.         .+..+.. .++.....     ...+|++ +..+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~---------~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~   70 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR---------VENPTAL-AELKAINPKVNITFHTYDVTVPVAE   70 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES---------SCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---------cccHHHH-HHHHhhCCCCCEEEEEeecCCCHHH
Confidence            47999999999999999999999999999999999873         2222222 22222222     1344666 4556


Q ss_pred             hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc---CCCcEEEEecCccc
Q psy16220         79 GDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ---NYGRLVMTASNSGL  155 (223)
Q Consensus        79 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~vsS~~~~  155 (223)
                      ++++++.+.++++++|+||||||..        +.++|++++++|+.+++.+++.++|+|.++   +.|+||++||.++.
T Consensus        71 ~~~~~~~~~~~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~  142 (254)
T d1sbya1          71 SKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF  142 (254)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc
Confidence            8899999999999999999999963        346799999999999999999999999765   35899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .+.++..+|++||+|+.+|+++|+.|++++||+||+|+||+| |++.+.+.
T Consensus       143 ~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~  193 (254)
T d1sbya1         143 NAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFN  193 (254)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccc
Confidence            999999999999999999999999999999999999999999 88766554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.8e-42  Score=268.48  Aligned_cols=190  Identities=20%  Similarity=0.215  Sum_probs=159.5

Q ss_pred             ccccCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   79 (223)
                      .++|+||++|||||++  |||+++|++|+++|++|++.+|         ++...+...+.....+  ..+.+|++|.+++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   73 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ---------AERLRPEAEKLAEALGGALLFRADVTQDEEL   73 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEES---------SGGGHHHHHHHHHHTTCCEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC---------cHHHHHHHHHhhhccCcccccccccCCHHHH
Confidence            4679999999999986  9999999999999999999987         4333333222222222  2345699999999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRD----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      +++++++.+++|++|+||||||....    .++.+.+.++|+..+++|+.+++.+++.+.|+|++.  |+||++||..+.
T Consensus        74 ~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~  151 (256)
T d1ulua_          74 DALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASE  151 (256)
T ss_dssp             HHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGT
T ss_pred             HHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhc
Confidence            99999999999999999999997643    456788999999999999999999999999998765  899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .+.++..+|+++|+|+.+|+|+|+.|++++|||||+|+||++ |++....
T Consensus       152 ~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~  201 (256)
T d1ulua_         152 KVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI  201 (256)
T ss_dssp             SBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch
Confidence            999999999999999999999999999999999999999999 6665544

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.1e-41  Score=265.27  Aligned_cols=192  Identities=31%  Similarity=0.515  Sum_probs=170.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGD   80 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   80 (223)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+        +++..+++.+++++.+..+   ..|++|.++++
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~--------~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~   84 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN--------STESAEEVVAAIKKNGSDAACVKANVGVVEDIV   84 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC--------chHHHHHHHHHHHhhCCceeeEeCCCCCHHHHH
Confidence            457999999999999999999999999999999999872        4566777788888776654   35888888899


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-cCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-GNF  159 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~  159 (223)
                      +.++++.+.++++|++|||+|.....++.+.+.++|++++++|+.+++.+++.++|+|.++  |++++++|..+.. +.+
T Consensus        85 ~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~  162 (272)
T d1g0oa_          85 RMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVP  162 (272)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCS
T ss_pred             HHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--ccccccccccccccccc
Confidence            9999999999999999999999888999999999999999999999999999999999865  7999998876544 577


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +...|+++|+|+++|+|+|+.|++++|||||+|+||+| |++.....
T Consensus       163 ~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~  209 (272)
T d1g0oa_         163 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVC  209 (272)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHG
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHH
Confidence            78889999999999999999999999999999999999 87765543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-41  Score=266.18  Aligned_cols=192  Identities=23%  Similarity=0.284  Sum_probs=156.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   85 (223)
                      .|++|||||++|||+++|+.|+++|++++++++....   .+....+.+..+++...+..   +.+|++|.+++++++++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~   78 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRD---LKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER   78 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESC---GGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCC---hhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhh
Confidence            5899999999999999999999999986665542111   01222333333444333333   35688888878777776


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      +.  .+.+|+||||||.....++.+.+.++|++++++|+.|++.+++.++|+|++++.|+||++||.++..+.|+..+|+
T Consensus        79 ~~--~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~  156 (285)
T d1jtva_          79 VT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (285)
T ss_dssp             CT--TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             cc--ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHH
Confidence            53  3899999999999988999999999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +||+|+.+|+++|+.|++++||+||+|+||+| |++.++..
T Consensus       157 asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~  197 (285)
T d1jtva_         157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL  197 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhc
Confidence            99999999999999999999999999999999 88877655

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=257.86  Aligned_cols=183  Identities=23%  Similarity=0.428  Sum_probs=161.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +|+||++|||||++|||+++|+.|+++|++|++++|         ++++++++.+     ...+..+.+|.. .++.++.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r---------~~~~l~~~~~-----~~~~~~~~~d~~-~~~~~~~   67 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI---------NESKLQELEK-----YPGIQTRVLDVT-KKKQIDQ   67 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHGGGGG-----STTEEEEECCTT-CHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHh-----ccCCceeeeecc-ccccccc
Confidence            599999999999999999999999999999999998         5555544322     233455666644 4566778


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCCCCchh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNFGQANY  164 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~y  164 (223)
                      ..+.++++|+||||||....+++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.|+||++||..+. .+.++..+|
T Consensus        68 ~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y  147 (245)
T d2ag5a1          68 FANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVY  147 (245)
T ss_dssp             HHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHH
T ss_pred             cccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHH
Confidence            8888999999999999999899999999999999999999999999999999999988999999998775 578899999


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +++|+|+++|+|+|+.|++++|||||+|+||+| |++..+
T Consensus       148 ~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~  187 (245)
T d2ag5a1         148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE  187 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHh
Confidence            999999999999999999999999999999999 776654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=260.18  Aligned_cols=189  Identities=25%  Similarity=0.289  Sum_probs=168.6

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-c---ccccCCccchHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-A---VPNYNSVVDGDKI   82 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~   82 (223)
                      |+||++|||||++|||+++|++|+++|++|++++|         +++.++++.+++...... .   ..|..+....+..
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r---------~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   82 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR---------SKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQF   82 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHH
Confidence            79999999999999999999999999999999988         888888888776654332 2   3355566667788


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQA  162 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  162 (223)
                      .+.+.+.++.+|++++|||.....++.+.+.++|++++++|+.+++.+++.++|+|++. .|+||++||.++..+.|+..
T Consensus        83 ~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~  161 (269)
T d1xu9a_          83 VAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVA  161 (269)
T ss_dssp             HHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCH
T ss_pred             HHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCch
Confidence            88888899999999999999888889999999999999999999999999999999865 49999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHhhhCC--CCeEEEEEeCCCc-ccccccCC
Q psy16220        163 NYSAAKMALVGLSNTLSIEGEK--NNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       163 ~y~~sK~a~~~~~~~l~~e~~~--~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +|++||+|+++|+++|+.|+++  .||+||+|+||+| |++..+..
T Consensus       162 ~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~  207 (269)
T d1xu9a_         162 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV  207 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc
Confidence            9999999999999999999974  5799999999999 88766544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.3e-40  Score=257.70  Aligned_cols=187  Identities=19%  Similarity=0.181  Sum_probs=166.4

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHH---cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----ccccccCCcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAE---RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----KAVPNYNSVV   77 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~---~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~   77 (223)
                      .|+||++|||||++|||+++|++|++   +|++|++++|         +.+.++++.+++...+.     .+.+|+++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r---------~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~   73 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR---------SESMLRQLKEELGAQQPDLKVVLAAADLGTEA   73 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES---------CHHHHHHHHHHHHHHCTTSEEEEEECCTTSHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEEC---------CHHHHHHHHHHHHhhcCCceEEEEEccCCCHH
Confidence            58999999999999999999999986   7999999988         88888898888877643     2456899999


Q ss_pred             chHHHHHHHHH----hcCCccEEEeccCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCcEEE
Q psy16220         78 DGDKIVQTALE----NFGRIDIVINNAGILR---DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN--YGRLVM  148 (223)
Q Consensus        78 ~~~~~~~~~~~----~~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~  148 (223)
                      +++++++.+.+    .++.+|++|||||...   ..++.+.+.++|++++++|+.+++.+++.++|+|++++  .|+||+
T Consensus        74 ~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~  153 (259)
T d1oaaa_          74 GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVN  153 (259)
T ss_dssp             HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccc
Confidence            99999988866    3467999999999754   35678899999999999999999999999999998765  579999


Q ss_pred             EecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        149 TASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       149 vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      +||.++..+.++..+|++||+|+.+|+++|+.|  ++||+||+|+||+| |++...
T Consensus       154 isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~  207 (259)
T d1oaaa_         154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHH
T ss_pred             cccccccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHH
Confidence            999999999999999999999999999999999  67999999999999 877653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=8.9e-40  Score=260.39  Aligned_cols=194  Identities=24%  Similarity=0.282  Sum_probs=168.0

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CC---ccccccCCccch
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GG---KAVPNYNSVVDG   79 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~   79 (223)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|         +..++++..+++.+. +.   .+.+|+++.+++
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r---------~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v   90 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR---------KMDVLKATAEQISSQTGNKVHAIQCDVRDPDMV   90 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC---------CHHHHHHHHHHHHHhcCCceEEEEecccChHHH
Confidence            35899999999999999999999999999999999998         777777777776543 22   345688888999


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCcEEEEecCcccccC
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-QNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~  158 (223)
                      ++.++.+.++++++|+||||||.....++...+.++|+.++.+|..+.+.+.+...+.+.. ...+.+++++|..+..+.
T Consensus        91 ~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~  170 (294)
T d1w6ua_          91 QNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS  170 (294)
T ss_dssp             HHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC
T ss_pred             HHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc
Confidence            9999999999999999999999988888999999999999999999999998888777665 445678888998899999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ++..+|+++|+|+.+|+|+||.|++++|||||+|+||+| |++..+...
T Consensus       171 ~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~  219 (294)
T d1w6ua_         171 GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD  219 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC
Confidence            999999999999999999999999999999999999999 888776654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-40  Score=255.63  Aligned_cols=191  Identities=30%  Similarity=0.386  Sum_probs=166.0

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +++||++|||||++|||+++|++|+++|++|++++|         +++.+++..+++.........+..+..+.+...+.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   72 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDL---------PNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALAL   72 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC---------TTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHhCCCcccccccccccccccccccc
Confidence            689999999999999999999999999999999998         56666777777766555667788888889999999


Q ss_pred             HHHhcCCccEEEeccCCCCC------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CCCcEEEEecCc
Q psy16220         86 ALENFGRIDIVINNAGILRD------KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ------NYGRLVMTASNS  153 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~vsS~~  153 (223)
                      +...++.+|.+++|++....      .+..+.+.++|++++++|+.+++++++.+.|+|...      +.|+||++||..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~  152 (248)
T d2o23a1          73 AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA  152 (248)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             cccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchh
Confidence            98889999999999876533      456678899999999999999999999999998754      458999999999


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        154 GLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       154 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      +..+.++..+|+++|+|+++|+|+|+.|++++|||||+|+||++ |++..+..
T Consensus       153 ~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~  205 (248)
T d2o23a1         153 AFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP  205 (248)
T ss_dssp             HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------
T ss_pred             hccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC
Confidence            99999999999999999999999999999999999999999999 77766554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.6e-38  Score=247.24  Aligned_cols=187  Identities=17%  Similarity=0.195  Sum_probs=156.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHH---HcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccccCCccchHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLA---ERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~---~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   84 (223)
                      |++|||||++|||+++|+.|+   ++|++|++++|         +.+.++++.+..+..  ...+.+|++|.++++++++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   73 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR---------NREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVA   73 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES---------CTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEEC---------CHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHh
Confidence            689999999999999999996   57999999998         444444433322222  2234669999999999999


Q ss_pred             HHHH--hcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----------CCCcEEEEe
Q psy16220         85 TALE--NFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-----------NYGRLVMTA  150 (223)
Q Consensus        85 ~~~~--~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~vs  150 (223)
                      .+.+  +++++|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|+|++.           ..|++|+++
T Consensus        74 ~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~  153 (248)
T d1snya_          74 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  153 (248)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             hhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence            8854  67899999999998655 467789999999999999999999999999999864           358999999


Q ss_pred             cCcccc---cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        151 SNSGLL---GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       151 S~~~~~---~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      |..+..   +.++..+|++||+|+.+|+++|+.|++++||+||+|+||+| |++..+..
T Consensus       154 S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~  212 (248)
T d1snya_         154 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA  212 (248)
T ss_dssp             CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC
T ss_pred             ccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC
Confidence            988764   45677899999999999999999999999999999999999 88876554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-39  Score=257.12  Aligned_cols=185  Identities=19%  Similarity=0.254  Sum_probs=162.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER-GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQT   85 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   85 (223)
                      +++|||||++|||+++|++|+++ |++|++++|         +.++.++..+++++.+..+   .+|++|.+++++++++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~   74 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR---------DVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF   74 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES---------SHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEEC---------CHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHH
Confidence            47799999999999999999986 899999988         8888999999998776554   4588888899999999


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-------  158 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  158 (223)
                      +.+++++||+||||||+....+..+.+.++|+.++++|+++++.+++.++|+|+++  |+||++||..+..+.       
T Consensus        75 ~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~  152 (275)
T d1wmaa1          75 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPEL  152 (275)
T ss_dssp             HHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHH
T ss_pred             HHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhh
Confidence            99999999999999999888888888999999999999999999999999999765  899999997664322       


Q ss_pred             ----------------------------------CCCchhhhhHHHHHHHHHHHHhhhCC----CCeEEEEEeCCCc-cc
Q psy16220        159 ----------------------------------FGQANYSAAKMALVGLSNTLSIEGEK----NNIHCNVIVPTAA-SR  199 (223)
Q Consensus       159 ----------------------------------~~~~~y~~sK~a~~~~~~~l~~e~~~----~~i~v~~v~Pg~v-t~  199 (223)
                                                        .+..+|++||+++.+|+++++.|+++    .||+||+|+||+| |+
T Consensus       153 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~  232 (275)
T d1wmaa1         153 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  232 (275)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             hhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence                                              22457999999999999999999865    5999999999999 88


Q ss_pred             ccccCC
Q psy16220        200 LTEDIL  205 (223)
Q Consensus       200 ~~~~~~  205 (223)
                      +.....
T Consensus       233 m~~~~~  238 (275)
T d1wmaa1         233 MAGPKA  238 (275)
T ss_dssp             TTCTTC
T ss_pred             cccCcc
Confidence            776543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.3e-38  Score=246.57  Aligned_cols=187  Identities=19%  Similarity=0.217  Sum_probs=151.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +.|+||||||++|||+++|++|+++|+  +|++.+|         +.++++++.+....+...+.+|++|.++++++++.
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R---------~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~   72 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR---------DVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES---------SGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeC---------CHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHH
Confidence            458999999999999999999999996  6787777         55555554433323333456799999999999999


Q ss_pred             HHHhcC--CccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----------CCcEEEEec
Q psy16220         86 ALENFG--RIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-----------YGRLVMTAS  151 (223)
Q Consensus        86 ~~~~~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----------~g~iv~vsS  151 (223)
                      +.+.++  ++|+||||||.... .++.+.+.++|++++++|+.|++.+++.++|+|++.+           .+++++++|
T Consensus        73 i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~  152 (250)
T d1yo6a1          73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS  152 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred             HHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccc
Confidence            988876  49999999998654 6788899999999999999999999999999998642           367999988


Q ss_pred             CcccccC-------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccccc
Q psy16220        152 NSGLLGN-------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTED  203 (223)
Q Consensus       152 ~~~~~~~-------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~  203 (223)
                      ..+....       .+..+|++||+|+.+|+++|+.|++++||+||+|+||+| |+|..+
T Consensus       153 ~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~  212 (250)
T d1yo6a1         153 GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             GGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             ccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC
Confidence            7665432       345679999999999999999999999999999999999 887654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.3e-38  Score=241.69  Aligned_cols=185  Identities=17%  Similarity=0.205  Sum_probs=151.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +||++|||||++|||+++|+.|+++|++|+++++......                ........+..+.++.+.....+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~   64 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------------SASVIVKMTDSFTEQADQVTAEVG   64 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------------SEEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------------cccceeecccCcHHHHHHHHHHHH
Confidence            5899999999999999999999999999999987433211                001122334444444555566655


Q ss_pred             Hhc--CCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchh
Q psy16220         88 ENF--GRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANY  164 (223)
Q Consensus        88 ~~~--~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y  164 (223)
                      +.+  +++|+||||||.... ....+.+.++|++++++|+.+++.+++.++|+|++.  |+||++||.++..+.++..+|
T Consensus        65 ~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y  142 (236)
T d1dhra_          65 KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGY  142 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHH
T ss_pred             HHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCccc
Confidence            544  479999999996544 456677789999999999999999999999999765  899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccccCCCCCCc
Q psy16220        165 SAAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTEDILPPGSY  210 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~~~~~~~~  210 (223)
                      ++||+|+.+|+++|+.|++  ++||+||+|+||++ |++.+...++..+
T Consensus       143 ~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  191 (236)
T d1dhra_         143 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF  191 (236)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchh
Confidence            9999999999999999998  68999999999999 8888777765543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.7e-37  Score=236.59  Aligned_cols=184  Identities=18%  Similarity=0.196  Sum_probs=149.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++||||||++|||+++|++|+++|++|++++|+..+...                .......+..+.++.+...+.+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~   65 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD----------------SNILVDGNKNWTEQEQSILEQTAS   65 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS----------------EEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc----------------ccceeccccCchhHHHHHHHHHHH
Confidence            3457999999999999999999999999999985432110                011122344444444444444444


Q ss_pred             --hcCCccEEEeccCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         89 --NFGRIDIVINNAGILRD-KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        89 --~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                        ++++||+||||||.... .+..+.+.++|+.++++|+.+++.+++.++|+|++.  |+||++||..+..+.++..+|+
T Consensus        66 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~  143 (235)
T d1ooea_          66 SLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYG  143 (235)
T ss_dssp             HHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHH
T ss_pred             HhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchH
Confidence              46899999999997654 455666678899999999999999999999999765  8999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhC--CCCeEEEEEeCCCc-ccccccCCCCCCc
Q psy16220        166 AAKMALVGLSNTLSIEGE--KNNIHCNVIVPTAA-SRLTEDILPPGSY  210 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~--~~~i~v~~v~Pg~v-t~~~~~~~~~~~~  210 (223)
                      +||+|+.+|+++|+.|++  +.+|+||+|+||++ |++.++..++..+
T Consensus       144 asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~  191 (235)
T d1ooea_         144 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH  191 (235)
T ss_dssp             HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCG
T ss_pred             HHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCcc
Confidence            999999999999999998  57999999999999 8888887766543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.1e-35  Score=235.44  Aligned_cols=179  Identities=21%  Similarity=0.259  Sum_probs=150.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---------------------c
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---------------------A   69 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~   69 (223)
                      ++|||||++|||+++|+.|+++|++|+++++        ++....+++.+++.+....                     .
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~   75 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYH--------RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   75 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEES--------SCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC--------CCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccc
Confidence            8999999999999999999999999999876        2566677777777765432                     2


Q ss_pred             ccccCCccchHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHH--------------HHHHhhhhHHHHHHHHHH
Q psy16220         70 VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQ--------------LVQDVHLTGAFRVSRAAW  135 (223)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~  135 (223)
                      ..|+++..+++++++++.+++|++|+||||||.....++.+.+.++|+              ..+.+|+.+++.+.+.+.
T Consensus        76 ~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  155 (284)
T d1e7wa_          76 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  155 (284)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecccc
Confidence            335777778889999999999999999999999888777776665554              478999999999999988


Q ss_pred             HHHH------hcCCCcEEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        136 PHMK------KQNYGRLVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       136 ~~~~------~~~~g~iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +.+.      +...++||+++|.....+.++..+|+++|+|+.+|+|+|+.|++++|||||+|+||++
T Consensus       156 ~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t  223 (284)
T d1e7wa_         156 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  223 (284)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             chhhhhHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence            8754      3345789999999999999999999999999999999999999999999999999985

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.5e-36  Score=241.26  Aligned_cols=184  Identities=15%  Similarity=0.141  Sum_probs=151.5

Q ss_pred             CCcEEEEEc--CCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--------------------
Q psy16220          8 DGRVAIVTG--AGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--------------------   65 (223)
Q Consensus         8 ~~~~~lItG--a~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------------------   65 (223)
                      ++|++||||  +++|||+++|+.|+++|++|++.++..         ...........+.                    
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP---------VYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLP   71 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG---------GHHHHHHHHHTTTTTGGGEETTTEECCEEEEEE
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch---------hhhhhhHHHHHHhhhhHHHHHHHhhhhhhhccc
Confidence            479999999  568999999999999999999987632         1111111110000                    


Q ss_pred             ---------------CCccccccCCccchHHHHHHHHHhcCCccEEEeccCCCCC--CCCCCCCHHHHHHHHHhhhhHHH
Q psy16220         66 ---------------GGKAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD--KSFARISDTDWQLVQDVHLTGAF  128 (223)
Q Consensus        66 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~  128 (223)
                                     .....+|+.+..+++++++.+.+.||+||+||||||....  +++.+.+.++|++++++|+++++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~  151 (329)
T d1uh5a_          72 FDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLI  151 (329)
T ss_dssp             CCTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             ccceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHH
Confidence                           0112346777888999999999999999999999997653  67889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEecCcccccCCC-CchhhhhHHHHHHHHHHHHhhhCC-CCeEEEEEeCCCc-ccccc
Q psy16220        129 RVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG-QANYSAAKMALVGLSNTLSIEGEK-NNIHCNVIVPTAA-SRLTE  202 (223)
Q Consensus       129 ~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~y~~sK~a~~~~~~~l~~e~~~-~~i~v~~v~Pg~v-t~~~~  202 (223)
                      .++|.++|+|++.  |+||++||.++..+.|+ ...|+++|+|+++|+|+|+.|+++ +|||||+|+||+| |+...
T Consensus       152 ~~~k~~~~~m~~~--GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~  226 (329)
T d1uh5a_         152 SLCKYFVNIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT  226 (329)
T ss_dssp             HHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGG
T ss_pred             HHHHHHHhhcccc--cccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhh
Confidence            9999999999765  89999999999998887 567999999999999999999987 6999999999999 64433

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.3e-35  Score=227.08  Aligned_cols=188  Identities=12%  Similarity=0.108  Sum_probs=157.3

Q ss_pred             cCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHH
Q psy16220          7 FDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKI   82 (223)
Q Consensus         7 ~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   82 (223)
                      |+||++|||||++  |||+++|+.|+++|++|++++|         +++..+...+.....+  .....+..+..+....
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ---------NDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTM   73 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES---------STTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHHHHhhcCCcceeecccchHHHHHHH
Confidence            7899999999998  8999999999999999999988         3333333322233222  2334577777778888


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCC-----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSF-----ARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      ++++.+.++++|++|||++......+     .....+.|...+.+|+.+.+.+.+.+.+.+.+.  +.||++||..+..+
T Consensus        74 ~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~  151 (258)
T d1qsga_          74 FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERA  151 (258)
T ss_dssp             HHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSB
T ss_pred             HHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccC
Confidence            99999999999999999987654332     346778899999999999999999999998665  68999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .|+...|++||+|+++|+|+++.|++++|||||+|+||+| |++.....
T Consensus       152 ~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  200 (258)
T d1qsga_         152 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK  200 (258)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc
Confidence            9999999999999999999999999999999999999999 77776554

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.7e-34  Score=226.82  Aligned_cols=191  Identities=21%  Similarity=0.194  Sum_probs=150.2

Q ss_pred             CCCccccCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-----------
Q psy16220          1 MPEQVRFDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-----------   67 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   67 (223)
                      ||  ++|+||++|||||++  |||+++|+.|+++|++|++++|+         ................           
T Consensus         2 ~~--~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (297)
T d1d7oa_           2 LP--IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV---------PALNIFETSLRRGKFDQSRVLPDGSLM   70 (297)
T ss_dssp             CC--CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH---------HHHHHHHHHHHTTTTTGGGBCTTSSBC
T ss_pred             CC--cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCc---------hhhhhhHHHHHHhhhhhhhhhhhhhhh
Confidence            55  678999999999875  99999999999999999999872         2211111110000000           


Q ss_pred             ------------------------ccccccCCccchHHHHHHHHHhcCCccEEEeccCCCC--CCCCCCCCHHHHHHHHH
Q psy16220         68 ------------------------KAVPNYNSVVDGDKIVQTALENFGRIDIVINNAGILR--DKSFARISDTDWQLVQD  121 (223)
Q Consensus        68 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~  121 (223)
                                              ....+..+..+.+++++++.++||++|+||||||...  .+++.+.+.++|+++++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~  150 (297)
T d1d7oa_          71 EIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAIS  150 (297)
T ss_dssp             CEEEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhccccccccc
Confidence                                    0011234556678899999999999999999999764  46788999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc-ccCCCCchhhhhHHHHHHHHHHHHhhhC-CCCeEEEEEeCCCc-c
Q psy16220        122 VHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL-LGNFGQANYSAAKMALVGLSNTLSIEGE-KNNIHCNVIVPTAA-S  198 (223)
Q Consensus       122 ~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v-t  198 (223)
                      +|+.+++.+++.+++.+.++  +.++++++.... ...+....|+++|+++..+++.++.|++ ++|||||+|+||++ |
T Consensus       151 vn~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T  228 (297)
T d1d7oa_         151 ASSYSFVSLLSHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS  228 (297)
T ss_dssp             HHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred             chhhhhhhhhhHHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccc
Confidence            99999999999999988776  567777665544 4457788999999999999999999997 57999999999999 7


Q ss_pred             cccccC
Q psy16220        199 RLTEDI  204 (223)
Q Consensus       199 ~~~~~~  204 (223)
                      ++....
T Consensus       229 ~~~~~~  234 (297)
T d1d7oa_         229 RAAKAI  234 (297)
T ss_dssp             CCSSCC
T ss_pred             hhhhhc
Confidence            776543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.3e-33  Score=215.92  Aligned_cols=179  Identities=30%  Similarity=0.293  Sum_probs=145.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +|++|||||++|||+++|++|+++|++|++++|+....+                  ......|..+........+....
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~------------------~~~~~~d~~~~~~~~~~~~~~~~   62 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED------------------LIYVEGDVTREEDVRRAVARAQE   62 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSS------------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccccc------------------ceEeeccccchhhhHHHHHhhhc
Confidence            489999999999999999999999999999998432210                  11234566666666666666655


Q ss_pred             hcCCccEEEeccCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHH------HhcCCCcEEEEecCcccccC
Q psy16220         89 NFGRIDIVINNAGILR----DKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHM------KKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~g~iv~vsS~~~~~~~  158 (223)
                      .. ..+.++.+++...    .......+.+.|++++++|+.+++.+++.+.+.+      .+++.|+||++||..+..+.
T Consensus        63 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  141 (241)
T d1uaya_          63 EA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  141 (241)
T ss_dssp             HS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             cc-cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC
Confidence            54 4555566655432    2455667889999999999999999999999984      44456899999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCC
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILP  206 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~  206 (223)
                      ++..+|+++|+|+.+|+|+|+.|++++|||||+|+||+| |++..+...
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~  190 (241)
T d1uaya_         142 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE  190 (241)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh
Confidence            999999999999999999999999999999999999999 877766553

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=6.3e-32  Score=211.61  Aligned_cols=184  Identities=23%  Similarity=0.259  Sum_probs=146.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc----ccccCCccc----hHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA----VPNYNSVVD----GDK   81 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~   81 (223)
                      .++|||||++|||+++|++|+++|++|++++|+        .+...+++.+++.......    ..+..+..+    ++.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRH--------SEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCED   73 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC--------chHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHH
Confidence            389999999999999999999999999999982        3444566677776654322    223333333    456


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCC-----------CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFA-----------RISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-----NYGR  145 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~  145 (223)
                      +++.+.+++|++|+||||||.....++.           +.....+...+..|+.+.+...+...+.+...     ..+.
T Consensus        74 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (266)
T d1mxha_          74 IIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS  153 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEE
T ss_pred             HHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccccccccc
Confidence            6777888999999999999987654432           23456677888999999999999887777543     3467


Q ss_pred             EEEEecCcccccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-cccc
Q psy16220        146 LVMTASNSGLLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLT  201 (223)
Q Consensus       146 iv~vsS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~  201 (223)
                      ++++++..+..+.++...|++||+|+++|+++|+.|++++|||||+|+||++ |++.
T Consensus       154 ~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~  210 (266)
T d1mxha_         154 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA  210 (266)
T ss_dssp             EEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS
T ss_pred             chhhhhccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc
Confidence            8899999999999999999999999999999999999999999999999999 5543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.98  E-value=2.1e-32  Score=214.69  Aligned_cols=186  Identities=15%  Similarity=0.183  Sum_probs=153.2

Q ss_pred             cCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhh-hHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          7 FDGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAA-DTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         7 ~~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      |+||++|||||  ++|||+++|++|+++|++|++++|         +..+. +++.+.+......+.+|+.+.++.+.++
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~---------~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~   74 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF---------DRLRLIQRITDRLPAKAPLLELDVQNEEHLASLA   74 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEEC---------SCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeC---------ChHHHHHHHHHHcCCceeeEeeeccccccccccc
Confidence            78999999994  679999999999999999999987         44333 3333444444455677999999888888


Q ss_pred             HHHHHhc---CCccEEEeccCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccc
Q psy16220         84 QTALENF---GRIDIVINNAGILRD-----KSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGL  155 (223)
Q Consensus        84 ~~~~~~~---~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  155 (223)
                      +.+.+.+   +++|++|||+|+...     .++.+.+.++|...+.+|..+.+...+...+.+..   +.+++++|....
T Consensus        75 ~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~  151 (268)
T d2h7ma1          75 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS  151 (268)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS
T ss_pred             chhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---cccccccccccc
Confidence            8887654   679999999997532     45667889999999999999999999988766543   456667777788


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccC
Q psy16220        156 LGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDI  204 (223)
Q Consensus       156 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~  204 (223)
                      .+.|+...|+++|+|+.+|+++++.|++++|||||+|+||++ |++..+.
T Consensus       152 ~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~  201 (268)
T d2h7ma1         152 RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAI  201 (268)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHH
T ss_pred             ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhh
Confidence            888999999999999999999999999999999999999999 8776543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.98  E-value=1.4e-31  Score=210.72  Aligned_cols=187  Identities=12%  Similarity=0.158  Sum_probs=140.9

Q ss_pred             cCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC---ccccccCCccchHH
Q psy16220          7 FDGRVAIVTGAGA--GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG---KAVPNYNSVVDGDK   81 (223)
Q Consensus         7 ~~~~~~lItGa~~--giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   81 (223)
                      |+||++|||||++  |||+++|+.|+++|++|++++|+         +. .++..+++.+.+.   ....|+.+..+.++
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~---------~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~   72 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN---------ES-LEKRVRPIAQELNSPYVYELDVSKEEHFKS   72 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESS---------TT-THHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCC---------HH-HHHHHHHHHhhCCceeEeeecccchhhHHH
Confidence            7899999999765  99999999999999999999983         22 2222333333333   33558888888899


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDK----SFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +++++.+.++++|++|||+|.....    ...+...+.+...+.++..+.+.+.+.+.+....  .+.|+++|+.+...+
T Consensus        73 ~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~~~~~~~  150 (274)
T d2pd4a1          73 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKY  150 (274)
T ss_dssp             HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB
T ss_pred             HHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc--Ccceeeecccccccc
Confidence            9999999999999999999976542    2233444445555555555555555555443222  245777777777788


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCC
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDIL  205 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~  205 (223)
                      .+....|+++|+|+.+++|+++.|++++|||||+|+||++ |++.....
T Consensus       151 ~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~  199 (274)
T d2pd4a1         151 MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA  199 (274)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST
T ss_pred             cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC
Confidence            8889999999999999999999999999999999999999 77665543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=1.7e-31  Score=208.62  Aligned_cols=175  Identities=18%  Similarity=0.254  Sum_probs=147.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIV   83 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   83 (223)
                      .++++|||||++|||+++|++|+++|+ +|++++|+.      .+.+..++..++++..+..+   .+|++|.+++++++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~------~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~   81 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSG------PDADGAGELVAELEALGARTTVAACDVTDRESVRELL   81 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSG------GGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCc------cCHHHHHHHHHHHHhccccccccccccchHHHHHHhh
Confidence            367999999999999999999999999 588888732      13344556667777666544   45777777777777


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCch
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQAN  163 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  163 (223)
                      +.+.+ .+++|+||||+|.....++.+.+.++|+.++++|+.+++.+.+.+    ...+.++||++||.++..+.+++..
T Consensus        82 ~~i~~-~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~  156 (259)
T d2fr1a1          82 GGIGD-DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGG  156 (259)
T ss_dssp             HTSCT-TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTT
T ss_pred             ccccc-cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHH
Confidence            76644 468999999999999999999999999999999999999988764    5556689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        164 YSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       164 y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      |+++|++++.|++.++.+    |+++++|+||.+
T Consensus       157 YaAaka~l~~la~~~~~~----Gi~v~~I~pg~~  186 (259)
T d2fr1a1         157 YAPGNAYLDGLAQQRRSD----GLPATAVAWGTW  186 (259)
T ss_dssp             THHHHHHHHHHHHHHHHT----TCCCEEEEECCB
T ss_pred             HHHHHHhHHHHHHHHHhC----CCCEEECCCCcc
Confidence            999999999998877654    899999999998

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.96  E-value=1.4e-29  Score=197.31  Aligned_cols=171  Identities=20%  Similarity=0.258  Sum_probs=121.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||++|||+++|++|+++|++|++++|+..+                       ...|+.+....+....+...+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------------~~~d~~~~~~~~~~~~~~~~~   58 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------------VIADLSTAEGRKQAIADVLAK   58 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------------EECCTTSHHHHHHHHHHHHTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------------HHHHhcCHHHHHHHHHHHHHH
Confidence            699999999999999999999999999999883221                       122444444444444444444


Q ss_pred             -cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc------------
Q psy16220         90 -FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL------------  156 (223)
Q Consensus        90 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~------------  156 (223)
                       .+.+|++|+|||.....       +.|.....+|..+...+.+...+.+.+...+.+.++++.....            
T Consensus        59 ~~~~id~lv~~Ag~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (257)
T d1fjha_          59 CSKGMDGLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             CTTCCSEEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             hCCCCcEEEEcCCCCCcH-------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhc
Confidence             46799999999964432       4477888999999999999999998877666666666543221            


Q ss_pred             ---------------c-CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc-ccccccCCCCCCc
Q psy16220        157 ---------------G-NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA-SRLTEDILPPGSY  210 (223)
Q Consensus       157 ---------------~-~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-t~~~~~~~~~~~~  210 (223)
                                     + .++..+|++||+|+.+|+|+|+.|++++|||||+|+||++ |++.+....+...
T Consensus       132 ~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~  202 (257)
T d1fjha_         132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY  202 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------
T ss_pred             cCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHH
Confidence                           1 1234579999999999999999999999999999999999 8888776554433

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.78  E-value=8.1e-21  Score=140.89  Aligned_cols=152  Identities=15%  Similarity=0.179  Sum_probs=104.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccccccCCccchHH
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAVPNYNSVVDGDK   81 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   81 (223)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|         +.++.++..+.+.....  ....|++|..+++ 
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-   87 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR---------KLDKAQAAADSVNKRFKVNVTAAETADDASRA-   87 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHHHTCCCEEEECCSHHHHH-
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhccc---------chHHHHHHHHHHHhccchhhhhhhcccHHHHH-
Confidence            35789999999999999999999999999999999988         77777777777765432  2234555544333 


Q ss_pred             HHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCc--ccccCC
Q psy16220         82 IVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNS--GLLGNF  159 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~--~~~~~~  159 (223)
                            +.++++|+||||||..    +...+.++|+..+.+|+.+.++....+.+.+.... .....+++..  +..+ .
T Consensus        88 ------~~~~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~-~  155 (191)
T d1luaa1          88 ------EAVKGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALG-I  155 (191)
T ss_dssp             ------HHTTTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHH-H
T ss_pred             ------HHhcCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccC-c
Confidence                  3357899999999953    45678899999999998887765544433222211 1222222211  1111 2


Q ss_pred             CCchhhhhHHHHHHHHHH
Q psy16220        160 GQANYSAAKMALVGLSNT  177 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~  177 (223)
                      +...|+++|+++..++++
T Consensus       156 g~~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         156 GGLKLKLHRACIAKLFES  173 (191)
T ss_dssp             HHHHHHHHHHHHHHHTSC
T ss_pred             CcHHHHHHHHHHHHHHhc
Confidence            345699999999887754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.2e-17  Score=135.04  Aligned_cols=172  Identities=15%  Similarity=0.098  Sum_probs=114.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   85 (223)
                      .|+||||||+|.||.+++++|+++|+.|++++|.....    +....+....+.......   +..|++|..++++.++.
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSF----NTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE   76 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCccc----chhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhc
Confidence            38999999999999999999999999999998843211    122222222222222222   34466666655555544


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc---------
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL---------  156 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~---------  156 (223)
                      .     .+|+++|+|+.....    .+.++.+.++++|+.++.++++++...- -.+..++|++||.+.+-         
T Consensus        77 ~-----~~d~v~h~aa~~~~~----~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E  146 (357)
T d1db3a_          77 V-----QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKE  146 (357)
T ss_dssp             H-----CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             c-----CCCEEEEeecccccc----hhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCC
Confidence            3     689999999976532    2234567789999999999999874331 12235799999865321         


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        157 --GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       157 --~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        +..+...|+.+|.+.+.+++.++..+   ++.+..+.|+.+
T Consensus       147 ~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~v  186 (357)
T d1db3a_         147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNH  186 (357)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccc
Confidence              11245789999999999999998874   688889998776

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=4.9e-17  Score=130.36  Aligned_cols=166  Identities=17%  Similarity=0.161  Sum_probs=116.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-ccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-KAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|.||+.++++|+++|+.|++++|....      ........+....... .+..|+.|.+...+.++.    
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~----   71 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS------KRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC------CTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCc------chhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc----
Confidence            69999999999999999999999999999863221      1111111222322222 234455555544444433    


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  158 (223)
                       .++|+|||+|+....    ..+.++..+.+++|+.++.++++.+    ++.+..++|++||.+.+.+.           
T Consensus        72 -~~~d~ViHlAa~~~~----~~~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~  142 (338)
T d1udca_          72 -HAIDTVIHFAGLKAV----GESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDQPKIPYVESFPT  142 (338)
T ss_dssp             -TTCSEEEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCC
T ss_pred             -cCCCEEEECCCccch----hhHHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEEcccccccccccccc
Confidence             269999999995321    1233445688999999999999987    44445689999997654321           


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .+...|+.+|.+.+.+++....+.  .++.+..+.|+.+
T Consensus       143 ~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v  180 (338)
T d1udca_         143 GTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNP  180 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEE
T ss_pred             CCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccE
Confidence             246789999999999999888774  4778888888887

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=1.8e-16  Score=127.46  Aligned_cols=168  Identities=17%  Similarity=0.139  Sum_probs=115.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHH-hCCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRS-KGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      |+||||||+|.||.+++++|+++|++|+++++....     ....... .+.+.. ....+..|+.|..+++.+++.   
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~-----~~~~~~~-~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---   72 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNS-----TYDSVAR-LEVLTKHHIPFYEVDLCDRKGLEKVFKE---   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC-----CTHHHHH-HHHHHTSCCCEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCc-----chhHHHh-HHhhcccCCeEEEeecCCHHHHHHHHhc---
Confidence            789999999999999999999999999998752211     1111111 122222 222234466555555544432   


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  157 (223)
                       + ++|+|||+|+.....    ...+.-..++.+|+.++.++.+++    ++.+..++|++||...+..           
T Consensus        73 -~-~~d~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~  142 (347)
T d1z45a2          73 -Y-KIDSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIP  142 (347)
T ss_dssp             -S-CCCEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred             -c-CCCEEEEcccccccc----ccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCccc
Confidence             2 799999999964321    122344678889999999999997    4444568999999665421           


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ----NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ----~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                          ..+...|+.+|.+.+.+++.+.... ..++.+..+.|+.+
T Consensus       143 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v  185 (347)
T d1z45a2         143 EECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNP  185 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEE
T ss_pred             cccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecce
Confidence                1235679999999999999988653 35778888887766

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=1.5e-16  Score=130.03  Aligned_cols=177  Identities=14%  Similarity=0.011  Sum_probs=115.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC----------CCCCCCCCChhhhhHHHHHHHHhC-CccccccCCcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG----------GQRDGDGKSSKAADTVVAEIRSKG-GKAVPNYNSVV   77 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   77 (223)
                      ||+||||||+|.||.+++++|+++|++|+++|--          ........+..........+.... ..+..|+.|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            6899999999999999999999999999998610          000000111111111111111111 12234666666


Q ss_pred             chHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCcccc
Q psy16220         78 DGDKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLL  156 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~  156 (223)
                      .++.+++..     ++|+|+|.|+.... +....+.+....++.+|+.++.++++.+    ++.+. .++++.||.....
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~~i~~ss~~~~~  150 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAI----KEFGEECHLVKLGTMGEYG  150 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEECCGGGGC
T ss_pred             HHHHHHHhh-----cchheecccccccc-ccccccccccccccccccccccHHHHHH----HHhccccceeecccccccc
Confidence            555555543     79999999986432 2233456777889999999999999987    33322 3566666644321


Q ss_pred             ------------------------cCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        157 ------------------------GNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       157 ------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                                              +..+...|+.+|.+.+.+++.++.+   .++.+.++.|+.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~~~v~  213 (393)
T d1i24a_         151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVY  213 (393)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEE
T ss_pred             ccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeeccccccc
Confidence                                    1123357999999999999988877   47899999998773

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.69  E-value=5.3e-16  Score=124.49  Aligned_cols=162  Identities=19%  Similarity=0.149  Sum_probs=114.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC-c----cccccCCccchHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG-K----AVPNYNSVVDGDKI   82 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~   82 (223)
                      .||+||||||+|.||.+++++|+++|++|+.+.|         +..+...+......... .    +..|+.|..+...+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   80 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR---------SASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV   80 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeC---------CchhHHHHHHhhhccccccccEEEeccccchhhhhhh
Confidence            5899999999999999999999999999999877         55444443332222211 1    22355555443332


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCcEEEEecCcccccC---
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKK-QNYGRLVMTASNSGLLGN---  158 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~---  158 (223)
                             +..+|+++|+++.....    .   +....+..|+.++.++++.+    .+ ....++|++||..+....   
T Consensus        81 -------~~~~~~v~~~a~~~~~~----~---~~~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~  142 (342)
T d1y1pa1          81 -------IKGAAGVAHIASVVSFS----N---KYDEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPN  142 (342)
T ss_dssp             -------TTTCSEEEECCCCCSCC----S---CHHHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTT
T ss_pred             -------cccchhhhhhccccccc----c---cccccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCC
Confidence                   34689999999864321    1   23456788999999999886    33 245799999996543211   


Q ss_pred             ----------------------------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 ----------------------------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ----------------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                                  .....|+.+|.+.+.+++.++.+.. .++++.+|+|+.+
T Consensus       143 ~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v  208 (342)
T d1y1pa1         143 VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYT  208 (342)
T ss_dssp             CCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEE
T ss_pred             CCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccce
Confidence                                        1234699999999999999988765 4788899999877

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.8e-16  Score=127.22  Aligned_cols=175  Identities=17%  Similarity=0.047  Sum_probs=114.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |++|||||+|.||.+++++|+++|++|+.++|........+-+................+..|++|......+++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            45599999999999999999999999999998544322111121111111122222223344666666555555443   


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------cC
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------GN  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------~~  158 (223)
                        .+++++|.++....    ..+.++....+++|+.++.++.+.+..+-. .+..++|++||.+.+-           +.
T Consensus        79 --~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~~~  151 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTPF  151 (347)
T ss_dssp             --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --ccceeeeeeecccc----chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCCCC
Confidence              68888888875332    223345566789999999999988744321 1225899999865431           11


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+...|+.||.+.+.+++.++..+   ++.+..+.|+.+
T Consensus       152 ~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~v  187 (347)
T d1t2aa_         152 YPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNH  187 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecce
Confidence            235679999999999999988774   678888888765

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.66  E-value=8.8e-16  Score=122.66  Aligned_cols=177  Identities=15%  Similarity=0.036  Sum_probs=114.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .|++|||||+|.||.+++++|+++|++|+.++|........+- ..+........  ...+.+...|..+.+.+.+.+..
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRI-NHIYIDPHNVN--KALMKLHYADLTDASSLRRWIDV   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTT-TTTC----------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhh-hhhhhhhhhcc--ccceEEEEccccCHHHHHHHHhh
Confidence            3799999999999999999999999999999985432111111 11111111111  12233333444444443333322


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCcccc----------c
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLL----------G  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~----------~  157 (223)
                      .  ++|++||+|+....    ..+.++....+..|+.++..+...+........ ..++++.||.....          +
T Consensus        78 ~--~~D~Vih~Aa~~~~----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          78 I--KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             H--CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             h--ccchhhhccccccc----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence            2  79999999996432    122345667889999999999988866544432 23455555543221          1


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..+...|+.+|.+.+.++..++..   .++.+.++.|+.|
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v  188 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNH  188 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCE
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccc
Confidence            234678999999999999998877   4789999999877

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=7.7e-16  Score=121.89  Aligned_cols=148  Identities=16%  Similarity=0.103  Sum_probs=109.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .|+||||||+|.||++++++|+++|+.+++++..        +                  ..|..+...+..+++.   
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~--------~------------------~~~~~~~~~~~~~~~~---   52 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR--------D------------------ELNLLDSRAVHDFFAS---   52 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT--------T------------------TCCTTCHHHHHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc--------h------------------hccccCHHHHHHHHhh---
Confidence            5789999999999999999999999998886431        0                  1244444433333321   


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----------  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  158 (223)
                        ..+|.++|+|+.....   .....+..+.+++|+.++.++++++    .+.+..++|++||.+.+.+.          
T Consensus        53 --~~~d~v~~~a~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~  123 (315)
T d1e6ua_          53 --ERIDQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESEL  123 (315)
T ss_dssp             --HCCSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGT
T ss_pred             --cCCCEEEEcchhcccc---ccchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCcc
Confidence              2699999999754321   1223445667889999999999887    45555689999997754321          


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 ------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                            +...+|+.+|.+.+.+++.+..+.   |+++..+.|+.|
T Consensus       124 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~v  165 (315)
T d1e6ua_         124 LQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNL  165 (315)
T ss_dssp             TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccE
Confidence                  123579999999999999998874   789999999887

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.3e-17  Score=127.44  Aligned_cols=159  Identities=13%  Similarity=0.024  Sum_probs=111.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .|+||||||+|.||++++++|+++|++|+++++....     ......       .......+|..+.+..+.       
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~-----~~~~~~-------~~~~~~~~d~~~~~~~~~-------   61 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTG-----RKRNVE-------HWIGHENFELINHDVVEP-------   61 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC-----CGGGTG-------GGTTCTTEEEEECCTTSC-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcC-----CHHHHH-------HhcCCCceEEEehHHHHH-------
Confidence            3789999999999999999999999999999763211     111111       111122334433332222       


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  157 (223)
                      .+.++|+|||+|+......    +.++..+.+++|+.++.++++++    ++.+ .++|++||.+.+..           
T Consensus        62 ~~~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~  132 (312)
T d2b69a1          62 LYIEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSEVYGDPEVHPQSEDYW  132 (312)
T ss_dssp             CCCCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred             HHcCCCEEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChheecCCCCCCCCcccc
Confidence            2346999999999654211    11345678899999999999986    3333 48999999654421           


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCcc
Q psy16220        158 -----NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAAS  198 (223)
Q Consensus       158 -----~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt  198 (223)
                           ..+...|+.+|.+.+.+++.++.++   |+.+.++.|+.|-
T Consensus       133 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vy  175 (312)
T d2b69a1         133 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTF  175 (312)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEE
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEE
Confidence                 1245779999999999999999884   7899999999983

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=1.2e-15  Score=123.26  Aligned_cols=161  Identities=15%  Similarity=0.104  Sum_probs=117.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++++||||||+|.||.+++++|+++|+.|+++++.....       ..        .......+...|..+.+...+.+ 
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~-------~~--------~~~~~~~~~~~D~~~~~~~~~~~-   77 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-------MT--------EDMFCDEFHLVDLRVMENCLKVT-   77 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-------SC--------GGGTCSEEEECCTTSHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc-------hh--------hhcccCcEEEeechhHHHHHHHh-
Confidence            578899999999999999999999999999998633221       00        00112234455555555544433 


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc----------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG----------  157 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~----------  157 (223)
                         ..+|.+||.|+.....   ....+.....+.+|+.++.+++..+    .+.+..++|++||......          
T Consensus        78 ---~~~d~Vih~a~~~~~~---~~~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~  147 (363)
T d2c5aa1          78 ---EGVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVS  147 (363)
T ss_dssp             ---TTCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             ---hcCCeEeecccccccc---cccccccccccccccchhhHHHHhH----HhhCccccccccccccccccccccccccc
Confidence               4689999999865431   1123446678889999999999987    5555568999999665431          


Q ss_pred             --------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 --------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 --------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                              ..+...|+.+|.+.+.+++.++.++   |+.+..+.|+.+
T Consensus       148 ~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~v  192 (363)
T d2c5aa1         148 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNI  192 (363)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCE
T ss_pred             cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeE
Confidence                    1235679999999999999998774   789999999988

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=4.1e-15  Score=119.03  Aligned_cols=170  Identities=15%  Similarity=0.044  Sum_probs=117.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH-HHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI-RSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      +-|++|||||+|.||++++++|.++|++|+.+++....     +........... ......+.+...|..+.....   
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~---   86 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATG-----HQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN---   86 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC-----CHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH---
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCc-----chhhHHHHHHhhhhcccCCeeEEeeccccccccc---
Confidence            45799999999999999999999999999999863221     222222221111 111122333344444444322   


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc---------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG---------  157 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~---------  157 (223)
                       ......+.++|.++....    ..+.++....+++|+.++.++++.+    .+.+..++|++||...+..         
T Consensus        87 -~~~~~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          87 -NACAGVDYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             -HHHTTCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             -cccccccccccccccccc----cccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccCC
Confidence             223468888888875332    1245667789999999999999987    5555569999999765432         


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 --NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 --~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                        ..+...|+.+|.+.+.+++.++...   ++++..+.|+.+
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v  196 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNV  196 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCE
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEecee
Confidence              2245789999999999999998774   688889999877

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8e-15  Score=117.53  Aligned_cols=173  Identities=18%  Similarity=0.077  Sum_probs=115.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh-CCccccccCCccchHHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK-GGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      |+||||||+|.||.+++++|+++|+.|+++++..................+.+... ...+..|+.|.+.++..+..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            68899999999999999999999999999986433322111222222222233221 11223455555444443332   


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  157 (223)
                        ..+++++|.|+....    ..+.++..+.+++|+.++.++.+++    .+.+..+++++||......           
T Consensus        80 --~~~~~i~h~Aa~~~~----~~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~  149 (346)
T d1ek6a_          80 --YSFMAVIHFAGLKAV----GESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAHP  149 (346)
T ss_dssp             --CCEEEEEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             --cccccccccccccCc----HhhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeecccccccccccc
Confidence              478899999996442    1223345678999999999999886    5555568999988654332           


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 -NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 -~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                       .....+|+.+|.+.+..++.++..  ..++....+.|+.+
T Consensus       150 ~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v  188 (346)
T d1ek6a_         150 TGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNP  188 (346)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEE
T ss_pred             ccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecce
Confidence             124567999999999999887764  35788888888877

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.62  E-value=1e-15  Score=123.71  Aligned_cols=167  Identities=14%  Similarity=0.046  Sum_probs=112.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc---ccccCCccchHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA---VPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   87 (223)
                      +||||||+|.||.+++++|++.|+.+++..++....   ........    +.. ...+   ..|++|...++.+++.. 
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~---~~~~~~~~----~~~-~~~~~~~~~Dl~d~~~l~~~~~~~-   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA---GNLESLSD----ISE-SNRYNFEHADICDSAEITRIFEQY-   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT---CCGGGGTT----TTT-CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc---ccHHHHHh----hhh-cCCcEEEEccCCCHHHHHHHHHhC-
Confidence            689999999999999999999999865543321111   01111111    111 1112   33666555555544432 


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCcEEEEecCccccc-----
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-----NYGRLVMTASNSGLLG-----  157 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~vsS~~~~~~-----  157 (223)
                          .+|+|||+|+....    ..+.++..+++++|+.++.++.+.+.......     +..++|++||...+-.     
T Consensus        73 ----~~d~VihlAa~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  144 (361)
T d1kewa_          73 ----QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             ----CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG
T ss_pred             ----CCCEEEECccccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCC
Confidence                79999999986432    11223446789999999999999987764331     2358999999664421     


Q ss_pred             ----------------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ----------------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ----------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                      ..+...|+.+|.+.+.+++.++..+   |+.+.++.|+.|
T Consensus       145 ~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~v  197 (361)
T d1kewa_         145 EVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNN  197 (361)
T ss_dssp             GSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             ccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCce
Confidence                            1234669999999999999998774   788999999887

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.59  E-value=4.5e-14  Score=114.69  Aligned_cols=179  Identities=17%  Similarity=0.188  Sum_probs=118.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--------ccccccCCccch
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAE-RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--------KAVPNYNSVVDG   79 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~   79 (223)
                      +++||||||+|.||.+++++|++ .|++|+++|+-.............+.....+.....        ...+...|..+.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999985 699999987533322212222223333333332211        111222233332


Q ss_pred             HHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--
Q psy16220         80 DKIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--  157 (223)
Q Consensus        80 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--  157 (223)
                      + .++++.+...++|+|+|.|+.....    ...+.....+++|+.++..++..+    +..+..++++++|......  
T Consensus        82 ~-~l~~~~~~~~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~~~~~  152 (383)
T d1gy8a_          82 D-FLNGVFTRHGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIFGNPT  152 (383)
T ss_dssp             H-HHHHHHHHSCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGTBSCC
T ss_pred             H-Hhhhhhhccceeehhhccccccccc----ccccccccccccccccccccchhh----hccCCcccccccccccccccc
Confidence            2 3444556667899999999965431    223445678889999999999887    4555567887777554321  


Q ss_pred             ----------------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCccc
Q psy16220        158 ----------------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAASR  199 (223)
Q Consensus       158 ----------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~vt~  199 (223)
                                      ..+...|+.+|.+.+.+++.+...   .|+.+.++.|+.+..
T Consensus       153 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG  207 (383)
T d1gy8a_         153 MGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACG  207 (383)
T ss_dssp             C-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEEC
T ss_pred             cccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeec
Confidence                            124678999999999999999877   478999999998743

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=4.6e-15  Score=112.70  Aligned_cols=156  Identities=15%  Similarity=0.110  Sum_probs=109.7

Q ss_pred             CccccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchH
Q psy16220          3 EQVRFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGD   80 (223)
Q Consensus         3 ~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      +++.+++|++|||||||.||++++++|+++|.  +|++++|++....    ...           ...+..+..|..+.+
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~----~~~-----------~~~i~~~~~D~~~~~   72 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD----EEA-----------YKNVNQEVVDFEKLD   72 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC----SGG-----------GGGCEEEECCGGGGG
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc----ccc-----------cceeeeeeecccccc
Confidence            45667899999999999999999999999996  7999988543211    111           112233344444443


Q ss_pred             HHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC
Q psy16220         81 KIVQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG  160 (223)
Q Consensus        81 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  160 (223)
                      +    +.+.+...|+++|++|...       .........++|+.++..+++.+    .+.+..++|++|+......  .
T Consensus        73 ~----~~~~~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~--~  135 (232)
T d2bkaa1          73 D----YASAFQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--S  135 (232)
T ss_dssp             G----GGGGGSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--C
T ss_pred             c----ccccccccccccccccccc-------cccchhhhhhhcccccceeeecc----cccCccccccCCccccccC--c
Confidence            3    3344567999999998532       22445667889999999998887    5556678999999766543  3


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCCe-EEEEEeCCCc
Q psy16220        161 QANYSAAKMALVGLSNTLSIEGEKNNI-HCNVIVPTAA  197 (223)
Q Consensus       161 ~~~y~~sK~a~~~~~~~l~~e~~~~~i-~v~~v~Pg~v  197 (223)
                      ...|+.+|...+...+.+       +. ++..|.||.+
T Consensus       136 ~~~Y~~~K~~~E~~l~~~-------~~~~~~IlRP~~i  166 (232)
T d2bkaa1         136 NFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVL  166 (232)
T ss_dssp             SSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEE
T ss_pred             cchhHHHHHHhhhccccc-------cccceEEecCcee
Confidence            467999999888655332       22 4778899998

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.57  E-value=1.6e-14  Score=114.39  Aligned_cols=163  Identities=18%  Similarity=0.070  Sum_probs=108.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHh--CCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK--GGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      |+||||||+|.||++++++|+++|++|+.++|.....    +...    .+.+...  ...+..|+.|..+..+.+... 
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~----~~~~----l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD----TRWR----LRELGIEGDIQYEDGDMADACSVQRAVIKA-   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC----CCHH----HHHTTCGGGEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc----cHHH----HHHhcccCCcEEEEccccChHHhhhhhccc-
Confidence            6899999999999999999999999999998843221    1111    1122111  111234555555444433332 


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecCccccc---------
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASNSGLLG---------  157 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~---------  157 (223)
                          ..++++++|+.....    ...++....++.|+.++.++++.+    ++.+. .++++.||.. .++         
T Consensus        72 ----~~~~~~~~a~~~~~~----~~~~~~~~~~~~n~~g~~~~l~~~----~~~~~~~~~i~~Ss~~-~~~~~~~~~~~E  138 (321)
T d1rpna_          72 ----QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAI----RQFSPETRFYQASTSE-MFGLIQAERQDE  138 (321)
T ss_dssp             ----CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHH----HHHCTTSEEEEEEEGG-GGCSCSSSSBCT
T ss_pred             ----ccccccccccccccc----ccccchHHHHhhhhhchHHHHHHH----HHhCCCcccccccchh-hcCcccCCCCCC
Confidence                577888888754321    112335678999999999999887    33332 3566666643 322         


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 ---NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ---~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                         ......|+.+|.+.+.+++.++.++   ++.+.++.|+.+
T Consensus       139 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~v  178 (321)
T d1rpna_         139 NTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNH  178 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             CCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecc
Confidence               2256889999999999999998774   678888888766

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.56  E-value=5.4e-14  Score=112.80  Aligned_cols=171  Identities=16%  Similarity=0.120  Sum_probs=113.2

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++||+||||||+|.||.+++++|+++|++|++++|.....         ..+.+.... ...+.....|..+.+.+.+.+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~---------~~~~~~~~~-~~~i~~~~~Dl~d~~~l~~~~   75 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV---------PSLFETARV-ADGMQSEIGDIRDQNKLLESI   75 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS---------SCHHHHTTT-TTTSEEEECCTTCHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc---------HHHHhhhhc-ccCCeEEEeeccChHhhhhhh
Confidence            5899999999999999999999999999999999843321         111111111 112333334444443433333


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecCccccc--------
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASNSGLLG--------  157 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~--------  157 (223)
                      ..  ..+|+++|.|+....    ..+.+.....+.+|+.++.++++++    .+.+ ...+++.|+......        
T Consensus        76 ~~--~~~~~v~~~aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~----~~~~~~~~~~~~s~~~~~~~~~~~~~~~  145 (356)
T d1rkxa_          76 RE--FQPEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAI----RHVGGVKAVVNITSDKCYDNKEWIWGYR  145 (356)
T ss_dssp             HH--HCCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHHCCCCEEEEECCGGGBCCCCSSSCBC
T ss_pred             hh--chhhhhhhhhccccc----cccccCCccccccccccchhhhhhh----hccccccccccccccccccccccccccc
Confidence            22  278999999985432    2234556778999999999999987    3322 234444444333221        


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHhhhC------CCCeEEEEEeCCCc
Q psy16220        158 ----NFGQANYSAAKMALVGLSNTLSIEGE------KNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ----~~~~~~y~~sK~a~~~~~~~l~~e~~------~~~i~v~~v~Pg~v  197 (223)
                          ..+...|+.+|...+.+++.++.++.      .+++.+..+.|+.+
T Consensus       146 ~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v  195 (356)
T d1rkxa_         146 ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNV  195 (356)
T ss_dssp             TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCE
T ss_pred             cccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCe
Confidence                12456799999999999998887754      24788889988876

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.55  E-value=1e-13  Score=110.12  Aligned_cols=152  Identities=16%  Similarity=0.112  Sum_probs=102.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC--ccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG--KAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +||||||+|.||++++++|+++|++|+++++-..       .... .....+.....  .+..|++|.+++.++++..  
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~-------~~~~-~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~--   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSR-------KGAT-DNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY--   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS-------TTHH-HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH--
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCc-------ccch-hHHHHhhccCCcEEEEcccCCHHHHHHHHHhc--
Confidence            5899999999999999999999999999875211       1111 11222222211  1234555555554444432  


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN----------  158 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  158 (223)
                         ++|++||+|+.....    ...++....+++|+.|+.++++.+    .+.+..+.+++||.....+.          
T Consensus        72 ---~~d~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~  140 (338)
T d1orra_          72 ---MPDSCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETE  140 (338)
T ss_dssp             ---CCSEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             ---CCceEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhh----hccccccccccccccccccccccccccccc
Confidence               689999999864321    223445788999999999999986    44454566666665443322          


Q ss_pred             ------------------CCCchhhhhHHHHHHHHHHHHhhhC
Q psy16220        159 ------------------FGQANYSAAKMALVGLSNTLSIEGE  183 (223)
Q Consensus       159 ------------------~~~~~y~~sK~a~~~~~~~l~~e~~  183 (223)
                                        .....|+.+|...+.+.......+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         141 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence                              1457799999999999998888764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=2.2e-13  Score=108.73  Aligned_cols=158  Identities=13%  Similarity=0.088  Sum_probs=106.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++|||||+|.||++++++|+++| +.|+.+++...         ......+  ......+..|+++..+.   .+...+ 
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~---------~~~~~~~--~~~~~~i~~Di~~~~~~---~~~~~~-   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD---------AISRFLN--HPHFHFVEGDISIHSEW---IEYHVK-   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG---------GGGGGTT--CTTEEEEECCTTTCSHH---HHHHHH-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc---------chhhhcc--CCCeEEEECccCChHHH---HHHHHh-
Confidence            69999999999999999999999 57888876221         1111110  01111233455555433   332322 


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC-----------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN-----------  158 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  158 (223)
                        .+|+|||+|+.....    ...++....+++|+.++.++++.+    .+.+ .+++++||...+...           
T Consensus        67 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~  135 (342)
T d2blla1          67 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSN  135 (342)
T ss_dssp             --HCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred             --CCCcccccccccccc----ccccCCcccccccccccccccccc----cccc-cccccccccccccccccccccccccc
Confidence              489999999965431    122334578999999999999997    3332 466777775543321           


Q ss_pred             -------CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -------FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -------~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                             .+...|+.+|.+.+.+++.++..+   |+.+..+.|+.+
T Consensus       136 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~  178 (342)
T d2blla1         136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNW  178 (342)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSE
T ss_pred             ccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeecccc
Confidence                   123679999999999999999884   788899988887

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.50  E-value=7.4e-14  Score=110.78  Aligned_cols=163  Identities=13%  Similarity=0.080  Sum_probs=109.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEE------EEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVV------VNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++|||||+|.||.+++++|+++|+.|.      ..+.....    ........    . .....+.+...|..+....  
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~----~~~~~~~~----~-~~~~~~~~~~~d~~~~~~~--   70 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA----GNRANLAP----V-DADPRLRFVHGDIRDAGLL--   70 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTT----CCGGGGGG----G-TTCTTEEEEECCTTCHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcc----ccHhHhhh----h-hcCCCeEEEEeccccchhh--
Confidence            699999999999999999999998643      33321111    01111111    1 0112223333333333321  


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC------
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN------  158 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~------  158 (223)
                        ......+|.++|.|+....    ..........+++|+.++.++++.+    .+.+..++|++||.+.+.+.      
T Consensus        71 --~~~~~~~d~vi~~a~~~~~----~~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~  140 (322)
T d1r6da_          71 --ARELRGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWT  140 (322)
T ss_dssp             --HHHTTTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBC
T ss_pred             --hccccccceEEeecccccc----cccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCC
Confidence              2234579999999985432    2233445677899999999999987    44455689999997654322      


Q ss_pred             -----CCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 -----FGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 -----~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                           .+...|+.+|.+.+.+++.++.++   ++.+.++.|+.|
T Consensus       141 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v  181 (322)
T d1r6da_         141 ESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNN  181 (322)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeE
Confidence                 245689999999999999999874   789999999988

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.49  E-value=2.3e-14  Score=114.88  Aligned_cols=164  Identities=15%  Similarity=0.141  Sum_probs=106.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      |.||||||+|.||.+++++|+++|+.|.++.++....  ..+......    +  ....+.+...|..+.+.+.+ +   
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~--~~~~~~~~~----~--~~~~i~~~~~Di~d~~~~~~-~---   70 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY--AGNKANLEA----I--LGDRVELVVGDIADAELVDK-L---   70 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT--TCCGGGTGG----G--CSSSEEEEECCTTCHHHHHH-H---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc--cccHHHHHH----h--hcCCeEEEEccCCCHHHHHH-H---
Confidence            6899999999999999999999998755554422110  111111111    1  11223333334444333322 2   


Q ss_pred             cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc------------
Q psy16220         90 FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG------------  157 (223)
Q Consensus        90 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~------------  157 (223)
                      +...+.++|.|+.....    ....+..+.+++|+.++.+++..+    ...+ .++|++||...+..            
T Consensus        71 ~~~~~~v~~~a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~----~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~  141 (346)
T d1oc2a_          71 AAKADAIVHYAAESHND----NSLNDPSPFIHTNFIGTYTLLEAA----RKYD-IRFHHVSTDEVYGDLPLREDLPGHGE  141 (346)
T ss_dssp             HTTCSEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHH----HHHT-CEEEEEEEGGGGCCBCCGGGSTTTTC
T ss_pred             Hhhhhhhhhhhhccccc----chhhCcccceeeehHhHHhhhhhh----cccc-ccccccccceEecccCcccccccccc
Confidence            24588899998864431    112334578899999999999876    3322 47788877654311            


Q ss_pred             -----------CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 -----------NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 -----------~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                                 ..+...|+.+|.+.+.+++.++.+   .++++.++.|+.|
T Consensus       142 ~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~v  189 (346)
T d1oc2a_         142 GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNN  189 (346)
T ss_dssp             STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCE
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecce
Confidence                       113467999999999999999877   4899999999988

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.7e-12  Score=96.41  Aligned_cols=148  Identities=18%  Similarity=0.119  Sum_probs=92.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .|+++||||||+||++++++|+++|++|+++.|++.+.....            ......+..|..|.++.++       
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~------------~~~~~~~~gD~~d~~~l~~-------   63 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG------------PRPAHVVVGDVLQAADVDK-------   63 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS------------CCCSEEEESCTTSHHHHHH-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc------------ccccccccccccchhhHHH-------
Confidence            468999999999999999999999999999998543321100            0011123335544443322       


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCC----Cchh
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFG----QANY  164 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~----~~~y  164 (223)
                      .+...|+||+++|........           +++..+..+++++    +++.+..++|++||.......+.    ...|
T Consensus        64 al~~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l~~a----a~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~  128 (205)
T d1hdoa_          64 TVAGQDAVIVLLGTRNDLSPT-----------TVMSEGARNIVAA----MKAHGVDKVVACTSAFLLWDPTKVPPRLQAV  128 (205)
T ss_dssp             HHTTCSEEEECCCCTTCCSCC-----------CHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCTTCSCGGGHHH
T ss_pred             HhcCCCEEEEEeccCCchhhh-----------hhhHHHHHHHHHH----HHhcCCCeEEEEeeeeccCCCcccccccccc
Confidence            234689999999864322111           1223344444444    46776779999998765544332    2345


Q ss_pred             hhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        165 SAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       165 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ...|...+.+.+       ..++....|.||.+
T Consensus       129 ~~~~~~~e~~l~-------~~~~~~tiirp~~~  154 (205)
T d1hdoa_         129 TDDHIRMHKVLR-------ESGLKYVAVMPPHI  154 (205)
T ss_dssp             HHHHHHHHHHHH-------HTCSEEEEECCSEE
T ss_pred             chHHHHHHHHHH-------hcCCceEEEeccee
Confidence            555555554332       36899999999988

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.37  E-value=1.4e-12  Score=98.44  Aligned_cols=161  Identities=18%  Similarity=0.156  Sum_probs=97.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEE--EccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVV--NDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      ++||||||+|+||+++++.|+++|+.+.+  ..|         +.....    .+.   ..+.....|..+.+...+.  
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R---------~~~~~~----~~~---~~~~~~~~d~~~~~~~~~~--   65 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR---------SAQGKE----KIG---GEADVFIGDITDADSINPA--   65 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEES---------CHHHHH----HTT---CCTTEEECCTTSHHHHHHH--
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcC---------CHHHHH----hcc---CCcEEEEeeeccccccccc--
Confidence            49999999999999999999999976444  434         333221    222   2233333444444333222  


Q ss_pred             HhcCCccEEEeccCCCCCCC---------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccC
Q psy16220         88 ENFGRIDIVINNAGILRDKS---------FARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGN  158 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  158 (223)
                        +..+|.+||+++......         ........+.....+|+.++..++...    .....+...+.++.....+.
T Consensus        66 --~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~  139 (252)
T d2q46a1          66 --FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPD  139 (252)
T ss_dssp             --HTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTT
T ss_pred             --cccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc----ccccccccccccccccCCCC
Confidence              346899999998653211         111223345566778999988887765    34444788888886665554


Q ss_pred             CCCchhhhhHHHHH-HHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        159 FGQANYSAAKMALV-GLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       159 ~~~~~y~~sK~a~~-~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .....+..++.... .....+..+   .|+++..+.||.+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v  176 (252)
T d2q46a1         140 HPLNKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGL  176 (252)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEE
T ss_pred             cccccccccchhhhhhhhhhhhhc---ccccceeecceEE
Confidence            44444433333333 333333333   5889999999988

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.29  E-value=1.3e-11  Score=91.78  Aligned_cols=146  Identities=11%  Similarity=0.071  Sum_probs=96.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      -|++|||||||.||++++++|+++|+  +|+...|+....                   ...+..+..|..   ...+  
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------------------~~~~~~~~~d~~---~~~~--   57 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------------------HPRLDNPVGPLA---ELLP--   57 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------------------CTTEECCBSCHH---HHGG--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------------------cccccccccchh---hhhh--
Confidence            37999999999999999999999998  455554421110                   011122222221   2111  


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhh
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSA  166 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~  166 (223)
                       ...+.+|.+|+++|.....      ...-+...++|+.++..+++.+    ++.+..+++++||..+..  .....|..
T Consensus        58 -~~~~~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~--~~~~~y~~  124 (212)
T d2a35a1          58 -QLDGSIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADA--KSSIFYNR  124 (212)
T ss_dssp             -GCCSCCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHH
T ss_pred             -ccccchheeeeeeeeeccc------cccccccccchhhhhhhccccc----cccccccccccccccccc--ccccchhH
Confidence             2235799999999854221      1123567888999999998876    555567899999976543  34567999


Q ss_pred             hHHHHHHHHHHHHhhhCCCCe-EEEEEeCCCcc
Q psy16220        167 AKMALVGLSNTLSIEGEKNNI-HCNVIVPTAAS  198 (223)
Q Consensus       167 sK~a~~~~~~~l~~e~~~~~i-~v~~v~Pg~vt  198 (223)
                      +|...+...+    +   .+. +...+.|+.+.
T Consensus       125 ~K~~~E~~l~----~---~~~~~~~I~Rp~~v~  150 (212)
T d2a35a1         125 VKGELEQALQ----E---QGWPQLTIARPSLLF  150 (212)
T ss_dssp             HHHHHHHHHT----T---SCCSEEEEEECCSEE
T ss_pred             HHHHHhhhcc----c---cccccceeeCCccee
Confidence            9988776543    2   232 57788999983

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.21  E-value=4.5e-11  Score=92.79  Aligned_cols=129  Identities=16%  Similarity=0.182  Sum_probs=87.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|.||.++++.|.++|..|++ ++...                       ....|+.|...+++.++..    
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~-----------------------~~~~Dl~~~~~~~~~i~~~----   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSK-----------------------EFCGDFSNPKGVAETVRKL----   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCS-----------------------SSCCCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCc-----------------------cccCcCCCHHHHHHHHHHc----
Confidence            6999999999999999999998865444 33110                       1234556655555555443    


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------CC
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------NF  159 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~~  159 (223)
                       ++|+|||+||......    +.+.-...+.+|+.++..+.+++    ++. ..+++++||.....+           ..
T Consensus        54 -~~D~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~  123 (298)
T d1n2sa_          54 -RPDVIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATS  123 (298)
T ss_dssp             -CCSEEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCC
T ss_pred             -CCCEEEEecccccccc----cccCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccC
Confidence             6899999999654211    12233567889999999998886    333 357888877654332           12


Q ss_pred             CCchhhhhHHHHHHHHHH
Q psy16220        160 GQANYSAAKMALVGLSNT  177 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~  177 (223)
                      +...|+.+|.+.+.+.+.
T Consensus       124 p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         124 PLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             CSSHHHHHHHHHHHHHHH
T ss_pred             CCchHhhhhhhhhhhHHh
Confidence            456899999888776654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.21  E-value=4.3e-10  Score=87.36  Aligned_cols=155  Identities=14%  Similarity=0.136  Sum_probs=102.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH--
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE--   88 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   88 (223)
                      ||||||+|.||.+++++|+++|+ .|+++++-.       +.....    .+      ...+..+..+.+...+....  
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~-------~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~~   64 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK-------DGTKFV----NL------VDLNIADYMDKEDFLIQIMAGE   64 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCS-------SGGGGH----HH------HTSCCSEEEEHHHHHHHHHTTC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCC-------Ccchhh----cc------cccchhhhccchHHHHHHhhhh
Confidence            89999999999999999999997 577765311       111111    11      12345555555666665554  


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc-----------
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG-----------  157 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  157 (223)
                      .+..+++++|.|+.....      ....+.....|+.+...+.+.+    ...+ -++++.||.....+           
T Consensus        65 ~~~~~~~i~~~aa~~~~~------~~~~~~~~~~~~~~~~~~l~~~----~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~  133 (307)
T d1eq2a_          65 EFGDVEAIFHEGACSSTT------EWDGKYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTSDFIESREY  133 (307)
T ss_dssp             CCSSCCEEEECCSCCCTT------CCCHHHHHHHTHHHHHHHHHHH----HHHT-CCEEEEEEGGGGTTCCSCBCSSGGG
T ss_pred             cccchhhhhhhccccccc------cccccccccccccccccccccc----cccc-ccccccccccccccccccccccccc
Confidence            346788999998753321      1233556778888888877765    3333 34555555444332           


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        158 NFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       158 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ......|+.+|.+.+.+++.+..+   .++.+..+.|..+
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~v  170 (307)
T d1eq2a_         134 EKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNV  170 (307)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEE
T ss_pred             cccccccccccchhhhhccccccc---cccccccccceeE
Confidence            235678999999999999999877   4667788887776

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.20  E-value=1.2e-10  Score=89.63  Aligned_cols=139  Identities=18%  Similarity=0.231  Sum_probs=92.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++|||||+|.||.+++++|.++|++|+.++|.                           ..|+.|..+++++++..    
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~---------------------------~~D~~d~~~~~~~l~~~----   51 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------------DLDITNVLAVNKFFNEK----   51 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------------TCCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech---------------------------hccCCCHHHHHHHHHHc----
Confidence            69999999999999999999999999998762                           12555555555544432    


Q ss_pred             CCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccc-----------cCC
Q psy16220         91 GRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLL-----------GNF  159 (223)
Q Consensus        91 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-----------~~~  159 (223)
                       ++|+|||+|+.....    ......+..+..|......+......    . ...+++.||.....           +..
T Consensus        52 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~----~-~~~~~~~ss~~v~~~~~~~~~~e~~~~~  121 (281)
T d1vl0a_          52 -KPNVVINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYS----V-GAEIVQISTDYVFDGEAKEPITEFDEVN  121 (281)
T ss_dssp             -CCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----H-TCEEEEEEEGGGSCSCCSSCBCTTSCCC
T ss_pred             -CCCEEEeeccccccc----cccccchhhccccccccccccccccc----c-cccccccccceeeecccccccccccccc
Confidence             689999999864321    12233456677787777777666522    2 14566666643322           223


Q ss_pred             CCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        160 GQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       160 ~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +...|+.+|...+.+.+..       +.....+.|+.+
T Consensus       122 ~~~~~~~~k~~~e~~~~~~-------~~~~~i~R~~~v  152 (281)
T d1vl0a_         122 PQSAYGKTKLEGENFVKAL-------NPKYYIVRTAWL  152 (281)
T ss_dssp             CCSHHHHHHHHHHHHHHHH-------CSSEEEEEECSE
T ss_pred             chhhhhhhhhHHHHHHHHh-------CCCccccceeEE
Confidence            5567888888877665432       345777888887

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.10  E-value=3.7e-09  Score=82.10  Aligned_cols=156  Identities=10%  Similarity=0.007  Sum_probs=86.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      .++||||||+|.||++++++|+++|++|+++.|+...     ...........+...+.  .....|..+.+...+    
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~-----~~~~~~~~~~~~~~~~v--~~v~~d~~d~~~~~~----   71 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV-----SNIDKVQMLLYFKQLGA--KLIEASLDDHQRLVD----   71 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCS-----SCHHHHHHHHHHHTTTC--EEECCCSSCHHHHHH----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcc-----cchhHHHHHhhhccCCc--EEEEeecccchhhhh----
Confidence            3569999999999999999999999999999884332     11112222333433332  222233333333322    


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCC-CCchhhhh
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNF-GQANYSAA  167 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~~~y~~s  167 (223)
                      .+...+.++++++.....               .|..+...++..+    .+....++++.||........ ....|...
T Consensus        72 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~  132 (312)
T d1qyda_          72 ALKQVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSI  132 (312)
T ss_dssp             HHTTCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTH
T ss_pred             hccCcchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhh
Confidence            234678888888743221               2333334444443    444456777777754432221 12223333


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +.......+.+..+   .++....+.|+.+
T Consensus       133 ~~~~~~~~~~~~~~---~~~~~~i~r~~~~  159 (312)
T d1qyda_         133 TFIDKRKVRRAIEA---ASIPYTYVSSNMF  159 (312)
T ss_dssp             HHHHHHHHHHHHHH---TTCCBCEEECCEE
T ss_pred             hhHHHHHHHHhhcc---cccceEEecccee
Confidence            43333333333333   4677888899988

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.07  E-value=2e-09  Score=83.15  Aligned_cols=154  Identities=13%  Similarity=0.155  Sum_probs=88.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +.|+||||||+|.||+++++.|+++|++|++++|+....    ...........+...+.  .....|..+.....+.+ 
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~----~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~-   74 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTAS----SNSEKAQLLESFKASGA--NIVHGSIDDHASLVEAV-   74 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTT----TTHHHHHHHHHHHTTTC--EEECCCTTCHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccc----cchhHHHHHHhhccCCc--EEEEeecccchhhhhhh-
Confidence            357899999999999999999999999999999854331    11111222333333322  22223333333333322 


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhhhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYSAA  167 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~~s  167 (223)
                         ...+.++++++...                   ..+...+.+++    ......++++.||............+...
T Consensus        75 ---~~~~~vi~~~~~~~-------------------~~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  128 (307)
T d1qyca_          75 ---KNVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKS  128 (307)
T ss_dssp             ---HTCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHH
T ss_pred             ---hhceeeeecccccc-------------------cchhhHHHHHH----HHhccccceeeeccccccccccccccccc
Confidence               35788999887432                   11222333332    34444677777776554444444444444


Q ss_pred             HHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        168 KMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       168 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      +............+   .++....+.|+.+
T Consensus       129 ~~~~~~~~~~~~~~---~~~~~~i~r~~~v  155 (307)
T d1qyca_         129 VFEVKAKVRRAIEA---EGIPYTYVSSNCF  155 (307)
T ss_dssp             HHHHHHHHHHHHHH---HTCCBEEEECCEE
T ss_pred             cccccccccchhhc---cCCCceeccccee
Confidence            44444333333333   4677888999988

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.00  E-value=2.2e-14  Score=105.78  Aligned_cols=165  Identities=14%  Similarity=0.071  Sum_probs=87.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccc------------
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVD------------   78 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------   78 (223)
                      ++.|+||+|++|+++|+.|+++|++|++.+|         ++++.+++.+++............+..+            
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R---------~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSR---------REEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEES---------SHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC---------CHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhhe
Confidence            5778899899999999999999999999988         7778888777776543322221111111            


Q ss_pred             -hHHHHHHHHH---hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcc
Q psy16220         79 -GDKIVQTALE---NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSG  154 (223)
Q Consensus        79 -~~~~~~~~~~---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  154 (223)
                       .....+....   ..................             ...+..+...+.+.....+........+++.|...
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (212)
T d1jaya_          73 PWEHAIDTARDLKNILREKIVVSPLVPVSRGA-------------KGFTYSSERSAAEIVAEVLESEKVVSALHTIPAAR  139 (212)
T ss_dssp             CHHHHHHHHHHTHHHHTTSEEEECCCCEECCT-------------TCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHH
T ss_pred             eeeccchHHHHhhhhhcccccccccccccccc-------------ccccccccchhhhhhhhhhhhhcccccceeecHHH
Confidence             1111111110   001111111111111100             00011111111122222233332223333334333


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        155 LLGNFGQANYSAAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       155 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      ..+......|...+++....++..+.++....+.++++.||.+
T Consensus       140 ~~~~~~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l  182 (212)
T d1jaya_         140 FANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPL  182 (212)
T ss_dssp             HHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESG
T ss_pred             hcCcccccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChH
Confidence            3344556667777777778888888777766777889999987

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.90  E-value=1.2e-08  Score=81.08  Aligned_cols=148  Identities=12%  Similarity=0.052  Sum_probs=87.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +.|+++||||||.||.+++++|+++|++|+++.|+..         ...  ...+... ..+.....|..+....++.. 
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~---------~~~--~~~~~~~-~~v~~~~gD~~d~~~~~~~a-   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK---------GLI--AEELQAI-PNVTLFQGPLLNNVPLMDTL-   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC---------SHH--HHHHHTS-TTEEEEESCCTTCHHHHHHH-
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcc---------hhh--hhhhccc-CCCEEEEeeCCCcHHHHHHH-
Confidence            4689999999999999999999999999999988422         111  1122221 12222223333333444433 


Q ss_pred             HhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc--CCCCchhh
Q psy16220         88 ENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG--NFGQANYS  165 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--~~~~~~y~  165 (223)
                        +...|.++++......                .++....+++.++    .+.+..++++.||......  ......|.
T Consensus        69 --~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~  126 (350)
T d1xgka_          69 --FEGAHLAFINTTSQAG----------------DEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMW  126 (350)
T ss_dssp             --HTTCSEEEECCCSTTS----------------CHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             --hcCCceEEeecccccc----------------hhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhh
Confidence              4567877766542211                1222233344443    4445568888888665433  33345677


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCCc
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTAA  197 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v  197 (223)
                      .+|...+.+.+.       .++....+.|+..
T Consensus       127 ~~k~~~~~~~~~-------~~~~~~~vr~~~~  151 (350)
T d1xgka_         127 APKFTVENYVRQ-------LGLPSTFVYAGIY  151 (350)
T ss_dssp             HHHHHHHHHHHT-------SSSCEEEEEECEE
T ss_pred             hhHHHHHHHHHh-------hccCceeeeecee
Confidence            788766655432       3566778888876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.13  E-value=5e-06  Score=59.45  Aligned_cols=79  Identities=23%  Similarity=0.295  Sum_probs=57.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+||++++|.+.++.....|++|+.+++         +.++.    +.+++.+....++..+....+...+.. 
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~---------~~~~~----~~~~~~Ga~~vi~~~~~~~~~~~~~~~-   94 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---------SDEKI----AYLKQIGFDAAFNYKTVNSLEEALKKA-   94 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---------SHHHH----HHHHHTTCSEEEETTSCSCHHHHHHHH-
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC---------CHHHH----HHHHhhhhhhhcccccccHHHHHHHHh-
Confidence            4889999999999999999999999999999876         44333    344555665556666655555544432 


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                       ....+|+++.+.|
T Consensus        95 -~~~Gvd~v~D~vG  107 (182)
T d1v3va2          95 -SPDGYDCYFDNVG  107 (182)
T ss_dssp             -CTTCEEEEEESSC
T ss_pred             -hcCCCceeEEecC
Confidence             2247999999998

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.07  E-value=1.1e-05  Score=56.44  Aligned_cols=73  Identities=19%  Similarity=0.380  Sum_probs=52.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++++.+||+|+ |++|+.+++.|...|+ ++.++.|         +..+.+.+.+++...       ..+.+       
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nR---------t~~ka~~l~~~~~~~-------~~~~~-------   76 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR---------TYERAVELARDLGGE-------AVRFD-------   76 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS---------SHHHHHHHHHHHTCE-------ECCGG-------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcC---------cHHHHHHHHHhhhcc-------cccch-------
Confidence            578999999998 9999999999999998 5878765         666766666655321       11222       


Q ss_pred             HHHHhcCCccEEEeccCC
Q psy16220         85 TALENFGRIDIVINNAGI  102 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~  102 (223)
                      ++.+.....|++|++.+.
T Consensus        77 ~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          77 ELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             GHHHHHHTCSEEEECCSS
T ss_pred             hHHHHhccCCEEEEecCC
Confidence            222233469999999874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=8.3e-06  Score=57.79  Aligned_cols=77  Identities=19%  Similarity=0.278  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+||++++|...++.+...|++|+++++         ++++.+    .+++.+....++..+.+    +.+++.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~---------~~~~~~----~~~~~Ga~~vi~~~~~~----~~~~i~   90 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAG---------TEEGQK----IVLQNGAHEVFNHREVN----YIDKIK   90 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---------SHHHHH----HHHHTTCSEEEETTSTT----HHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccc---------cccccc----cccccCccccccccccc----HHHHhh
Confidence            5789999999999999999998889999999875         443332    33444555455544433    233333


Q ss_pred             Hhc--CCccEEEeccC
Q psy16220         88 ENF--GRIDIVINNAG  101 (223)
Q Consensus        88 ~~~--~~id~li~~ag  101 (223)
                      +..  ..+|+++.+.|
T Consensus        91 ~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          91 KYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             HHHCTTCEEEEEESCH
T ss_pred             hhhccCCceEEeeccc
Confidence            322  36999999876

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.06  E-value=8e-06  Score=58.05  Aligned_cols=103  Identities=21%  Similarity=0.268  Sum_probs=64.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+||+||+|...++.....|++|+.+++         ++++.+    .+++.+.....+..+.      .++..
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~---------s~~k~~----~~~~lGa~~vi~~~~~------~~~~~   91 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG---------KAAEHD----YLRVLGAKEVLAREDV------MAERI   91 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES---------CTTCHH----HHHHTTCSEEEECC-------------
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecC---------chHHHH----HHHhcccceeeecchh------HHHHH
Confidence            4779999999999999999988889999999876         344332    2333444444433221      11222


Q ss_pred             Hh--cCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCccccc
Q psy16220         88 EN--FGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLG  157 (223)
Q Consensus        88 ~~--~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  157 (223)
                      +.  -+++|+++.+.|...           |               ...+..++..  |+++.++...+..+
T Consensus        92 ~~~~~~gvD~vid~vgg~~-----------~---------------~~~l~~l~~~--Griv~~G~~~g~~~  135 (176)
T d1xa0a2          92 RPLDKQRWAAAVDPVGGRT-----------L---------------ATVLSRMRYG--GAVAVSGLTGGAEV  135 (176)
T ss_dssp             --CCSCCEEEEEECSTTTT-----------H---------------HHHHHTEEEE--EEEEECSCCSSSCC
T ss_pred             HHhhccCcCEEEEcCCchh-----------H---------------HHHHHHhCCC--ceEEEeecccCccc
Confidence            22  247999999998321           1               1223334444  89999998766543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.98  E-value=6.4e-05  Score=52.71  Aligned_cols=81  Identities=19%  Similarity=0.238  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc-ccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP-NYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   86 (223)
                      .|.+++|+| +|++|...++.+...|++|+++++         ++.+.+.    .++.+..... ......+.....+.+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~---------~~~r~~~----a~~~ga~~~~~~~~~~~~~~~~~~~~   91 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTAR---------SPRRLEV----AKNCGADVTLVVDPAKEEESSIIERI   91 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES---------CHHHHHH----HHHTTCSEEEECCTTTSCHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccch---------HHHHHHH----HHHcCCcEEEeccccccccchhhhhh
Confidence            367899997 689999999988889999999976         5555433    2333333222 222334455666666


Q ss_pred             HHhcC-CccEEEeccCC
Q psy16220         87 LENFG-RIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~-~id~li~~ag~  102 (223)
                      .+..+ .+|++|.++|.
T Consensus        92 ~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          92 RSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HHHSSSCCSEEEECSCC
T ss_pred             hcccccCCceeeecCCC
Confidence            66554 69999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=3e-05  Score=54.61  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=54.9

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      .+++||.+||.|+ ||-+++++..|.+.|+++.++.|         +.++.+.+.+.+...+.....   +..+.     
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nR---------t~~ka~~l~~~~~~~~~~~~~---~~~~~-----   75 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR---------TVSRAEELAKLFAHTGSIQAL---SMDEL-----   75 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS---------SHHHHHHHHHHTGGGSSEEEC---CSGGG-----
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccc---------hHHHHHHHHHHHhhccccccc---ccccc-----
Confidence            4578999999997 68899999999999999999876         777777777666554321111   11111     


Q ss_pred             HHHHhcCCccEEEeccCCC
Q psy16220         85 TALENFGRIDIVINNAGIL  103 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~  103 (223)
                          .....|++||+....
T Consensus        76 ----~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 ----EGHEFDLIINATSSG   90 (170)
T ss_dssp             ----TTCCCSEEEECCSCG
T ss_pred             ----cccccceeecccccC
Confidence                124689999997543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.93  E-value=1.2e-05  Score=57.25  Aligned_cols=77  Identities=21%  Similarity=0.243  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||+||++++|...++.+...|++++++++         +.++.    +.+++.+....++..+.    +..+++.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~---------~~~~~----~~l~~~Ga~~vi~~~~~----~~~~~v~   87 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---------SDAKR----EMLSRLGVEYVGDSRSV----DFADEIL   87 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---------SHHHH----HHHHTTCCSEEEETTCS----THHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeec---------ccccc----cccccccccccccCCcc----CHHHHHH
Confidence            4789999999999999999998889999999875         44333    23444555444443332    2333444


Q ss_pred             Hhc--CCccEEEeccC
Q psy16220         88 ENF--GRIDIVINNAG  101 (223)
Q Consensus        88 ~~~--~~id~li~~ag  101 (223)
                      +..  .++|+++.+.|
T Consensus        88 ~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          88 ELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             HHTTTCCEEEEEECCC
T ss_pred             HHhCCCCEEEEEeccc
Confidence            433  36999999987

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=0.00013  Score=51.09  Aligned_cols=80  Identities=26%  Similarity=0.341  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++         ++.+.+.    .++.+..... ..+..+.....+.+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~---------~~~rl~~----a~~~Ga~~~~-~~~~~~~~~~~~~~   90 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDL---------SATRLSK----AKEIGADLVL-QISKESPQEIARKV   90 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES---------CHHHHHH----HHHTTCSEEE-ECSSCCHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccC---------CHHHHHH----HHHhCCcccc-cccccccccccccc
Confidence            3678999986 9999999999989999 6888876         5555432    2233333332 33334455555555


Q ss_pred             HHhcC-CccEEEeccCC
Q psy16220         87 LENFG-RIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~-~id~li~~ag~  102 (223)
                      ...++ .+|++|.+.|.
T Consensus        91 ~~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          91 EGQLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHHHTSCCSEEEECSCC
T ss_pred             cccCCCCceEEEeccCC
Confidence            55454 79999999983

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=2.4e-05  Score=55.48  Aligned_cols=79  Identities=16%  Similarity=0.178  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||++++|...++.....|++|+++++         ++++.+.    +++.+....+|..+. +..+.+.++-
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~---------s~~k~~~----~~~lGa~~vi~~~~~-d~~~~v~~~t   93 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---------TAQKAQS----ALKAGAWQVINYREE-DLVERLKEIT   93 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---------SHHHHHH----HHHHTCSEEEETTTS-CHHHHHHHHT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeeccc---------chHHHHH----HHhcCCeEEEECCCC-CHHHHHHHHh
Confidence            3789999999999999999999899999999976         5555433    334455555554443 3322222221


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                       .-..+|+++.+.+
T Consensus        94 -~g~g~d~v~d~~g  106 (179)
T d1qora2          94 -GGKKVRVVYDSVG  106 (179)
T ss_dssp             -TTCCEEEEEECSC
T ss_pred             -CCCCeEEEEeCcc
Confidence             1246899999887

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=5e-05  Score=55.85  Aligned_cols=80  Identities=15%  Similarity=0.102  Sum_probs=56.3

Q ss_pred             ccCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          6 RFDGRVAIVTGA----------------GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         6 ~~~~~~~lItGa----------------~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      +|+|+++|||+|                ||..|.++|+.+..+|++|.++.-+.....                    ..
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------------p~   62 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------------PP   62 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------------CT
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------------cc
Confidence            688999999987                468999999999999999999864221100                    00


Q ss_pred             ccccCCccchHHHHHHHHHhcCCccEEEeccCCCCC
Q psy16220         70 VPNYNSVVDGDKIVQTALENFGRIDIVINNAGILRD  105 (223)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~  105 (223)
                      ........+.+...+.+.+.+...|++|++|++...
T Consensus        63 ~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          63 FVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             TEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             ccccceehhhHHHHHHHHhhhccceeEeeeechhhh
Confidence            112223344556666666667789999999998654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=0.00016  Score=51.34  Aligned_cols=87  Identities=13%  Similarity=0.176  Sum_probs=56.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      .++++|+++|.|+ ||.|++++..|++.|. ++.++.|+..      ..++...+.+.+....... ....+..+.+...
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~------~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~   85 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE------FFDKALAFAQRVNENTDCV-VTVTDLADQQAFA   85 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSST------THHHHHHHHHHHHHHSSCE-EEEEETTCHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchH------HHHHHHHHHHHHHhhcCcc-eEeeecccccchh
Confidence            4678999999999 5999999999999998 6778777321      2334444555555543322 2233333333333


Q ss_pred             HHHHHhcCCccEEEeccCCC
Q psy16220         84 QTALENFGRIDIVINNAGIL  103 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~  103 (223)
                      +.    ....|++||+....
T Consensus        86 ~~----~~~~diiIN~Tp~G  101 (182)
T d1vi2a1          86 EA----LASADILTNGTKVG  101 (182)
T ss_dssp             HH----HHTCSEEEECSSTT
T ss_pred             hh----hcccceeccccCCc
Confidence            32    24689999997643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.75  E-value=5e-05  Score=54.39  Aligned_cols=84  Identities=15%  Similarity=0.190  Sum_probs=56.6

Q ss_pred             CcEEEE-EcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccccc--CCccchHHHHHH
Q psy16220          9 GRVAIV-TGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNY--NSVVDGDKIVQT   85 (223)
Q Consensus         9 ~~~~lI-tGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   85 (223)
                      |.+++| +||++++|.+.++.....|++|+.+.+         +....++..+.+++.+....++.  .+..+....+.+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~---------~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~   99 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIR---------DRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKE   99 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEEC---------CCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEe---------cccccchHHhhhhhccccEEEeccccchhHHHHHHHH
Confidence            555555 689999999999888888999999876         44445555556666665554433  233334455555


Q ss_pred             HHHh-cCCccEEEeccC
Q psy16220         86 ALEN-FGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~-~~~id~li~~ag  101 (223)
                      +.+. -+++|+++.+.|
T Consensus       100 ~~~~~g~~vdvv~D~vg  116 (189)
T d1gu7a2         100 WIKQSGGEAKLALNCVG  116 (189)
T ss_dssp             HHHHHTCCEEEEEESSC
T ss_pred             HHhhccCCceEEEECCC
Confidence            5443 357999999876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.70  E-value=0.00013  Score=51.40  Aligned_cols=78  Identities=14%  Similarity=0.145  Sum_probs=55.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ..+++|.++|.|+ ||-+++++..|.+.+.++.++.|         +.++.+.+.+.+...........   +       
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR---------~~~~a~~l~~~~~~~~~~~~~~~---~-------   73 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANR---------TFSKTKELAERFQPYGNIQAVSM---D-------   73 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEES---------SHHHHHHHHHHHGGGSCEEEEEG---G-------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccc---------hHHHHHHHHHHHhhccccchhhh---c-------
Confidence            4578999999877 58899999999988889999977         77888887777765432221111   0       


Q ss_pred             HHHHhcCCccEEEeccCCCC
Q psy16220         85 TALENFGRIDIVINNAGILR  104 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~  104 (223)
                        .......|++||+.....
T Consensus        74 --~~~~~~~diiIN~tp~g~   91 (171)
T d1p77a1          74 --SIPLQTYDLVINATSAGL   91 (171)
T ss_dssp             --GCCCSCCSEEEECCCC--
T ss_pred             --cccccccceeeecccccc
Confidence              012357999999987543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.70  E-value=1.7e-05  Score=56.01  Aligned_cols=42  Identities=17%  Similarity=0.213  Sum_probs=35.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVV   59 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~   59 (223)
                      ++|.++|.|+ |.+|+.+|+.|+++|++|++++|         +..+.+.+.
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr---------~~~~a~~l~   42 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACR---------TLESAKKLS   42 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEES---------CHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC---------ChHHHHHHH
Confidence            3689999987 89999999999999999999988         666655543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.62  E-value=9.6e-05  Score=51.97  Aligned_cols=74  Identities=19%  Similarity=0.352  Sum_probs=49.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|+++||+||+|++|...++.+...|++|+.+++         ++++.+.    +++.+.....+.   .+   ..+++ 
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~---------~~~~~~~----~~~lGa~~~i~~---~~---~~~~~-   86 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS---------RPEKLAL----PLALGAEEAATY---AE---VPERA-   86 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---------SGGGSHH----HHHTTCSEEEEG---GG---HHHHH-
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccc---------ccccccc----ccccccceeeeh---hh---hhhhh-
Confidence            5789999999999999999988889999999876         3333332    233344333332   22   12222 


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      .....+|+++.+.|
T Consensus        87 ~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          87 KAWGGLDLVLEVRG  100 (171)
T ss_dssp             HHTTSEEEEEECSC
T ss_pred             hccccccccccccc
Confidence            23457999999776

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.57  E-value=0.00026  Score=50.09  Aligned_cols=80  Identities=18%  Similarity=0.228  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++.+.+.    .++.+.....+..+ .+.....+.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~---------~~~~~~~----a~~lGa~~vi~~~~-~~~~~~~~~i   92 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAG---------SPNRLKL----AEEIGADLTLNRRE-TSVEERRKAI   92 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEES---------CHHHHHH----HHHTTCSEEEETTT-SCHHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccc---------ccccccc----cccccceEEEeccc-cchHHHHHHH
Confidence            4789999997 8999999999989998 7888876         5555432    23334444444333 2333344445


Q ss_pred             HHhc--CCccEEEeccCC
Q psy16220         87 LENF--GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~  102 (223)
                      .+..  ..+|++|.+.|.
T Consensus        93 ~~~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          93 MDITHGRGADFILEATGD  110 (182)
T ss_dssp             HHHTTTSCEEEEEECSSC
T ss_pred             HHhhCCCCceEEeecCCc
Confidence            4433  259999999884

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=7.2e-05  Score=45.22  Aligned_cols=34  Identities=32%  Similarity=0.401  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.++||+||++|+|...++.+...|++|+.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~   64 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG   64 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEEC
Confidence            5779999999999999999988888999998865

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.51  E-value=9.8e-05  Score=48.18  Aligned_cols=39  Identities=33%  Similarity=0.509  Sum_probs=34.3

Q ss_pred             CCccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          2 PEQVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         2 ~~~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      |.-++++||++||+|++ .+|..-++.|++.|++|++++.
T Consensus         5 Pi~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~   43 (113)
T d1pjqa1           5 PIFCQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNAL   43 (113)
T ss_dssp             EEEECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEES
T ss_pred             ceEEEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEec
Confidence            34567899999999987 5999999999999999999864

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.45  E-value=0.00029  Score=49.20  Aligned_cols=78  Identities=19%  Similarity=0.237  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .+.+++|+|+++++|..++..+...|+ +|+++++         ++.+.+.    +++.+.....+..+.+    ..+++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~---------~~~~~~~----~~~~Ga~~~i~~~~~~----~~~~~   89 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---------REEAVEA----AKRAGADYVINASMQD----PLAEI   89 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---------SHHHHHH----HHHHTCSEEEETTTSC----HHHHH
T ss_pred             CCCEEEEEeccccceeeeeeccccccccccccccc---------chhhHHH----HHHcCCceeeccCCcC----HHHHH
Confidence            367999999999999999999998885 7777765         4444332    2333444444443332    23333


Q ss_pred             HHhc--CCccEEEeccCC
Q psy16220         87 LENF--GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~  102 (223)
                      .+..  +.+|++|.++|.
T Consensus        90 ~~~~~~~~~d~vid~~g~  107 (170)
T d1jvba2          90 RRITESKGVDAVIDLNNS  107 (170)
T ss_dssp             HHHTTTSCEEEEEESCCC
T ss_pred             HHHhhcccchhhhccccc
Confidence            3332  359999999883

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.44  E-value=0.00051  Score=47.87  Aligned_cols=76  Identities=21%  Similarity=0.225  Sum_probs=49.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.+++|.|+ |++|...++.+...|++|+++++         ++++.+.    .++.+.....+..+..+.      ..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~---------~~~k~~~----a~~lGa~~~i~~~~~~~~------~~   86 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISR---------SSRKRED----AMKMGADHYIATLEEGDW------GE   86 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES---------SSTTHHH----HHHHTCSEEEEGGGTSCH------HH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhcccccccccc---------chhHHHH----hhccCCcEEeeccchHHH------HH
Confidence            4789999987 89999988887788999999987         4444332    233343333333322221      12


Q ss_pred             HhcCCccEEEeccCCC
Q psy16220         88 ENFGRIDIVINNAGIL  103 (223)
Q Consensus        88 ~~~~~id~li~~ag~~  103 (223)
                      +..+.+|+++.+.+..
T Consensus        87 ~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          87 KYFDTFDLIVVCASSL  102 (168)
T ss_dssp             HSCSCEEEEEECCSCS
T ss_pred             hhhcccceEEEEecCC
Confidence            2345799999987753

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.43  E-value=0.00085  Score=45.60  Aligned_cols=114  Identities=18%  Similarity=0.172  Sum_probs=63.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc----cccccCCccchHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK----AVPNYNSVVDGDKIVQ   84 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   84 (223)
                      ++.|+||+|.+|.++|..|+.+|  -++++++++       .+..+.+....++......    .........+      
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~-------~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d------   68 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGRE-------HSINKLEGLREDIYDALAGTRSDANIYVESDEN------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECG-------GGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccch-------hhhHhhhcccccchhcccccccCCccccCCcch------
Confidence            68899999999999999999988  378998761       1222333333344321111    1111100011      


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEE
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMT  149 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~v  149 (223)
                        .+.+..-|++|.+||....   ...+..   +.++.|..    +++.+.+.+.+.....|+.+
T Consensus        69 --~~~l~~aDvVVitAG~~~~---~g~sR~---dl~~~Na~----iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          69 --LRIIDESDVVIITSGVPRK---EGMSRM---DLAKTNAK----IVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             --GGGGTTCSEEEECCSCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHHCCCEEEEC
T ss_pred             --HHHhccceEEEEecccccC---CCCChh---hhhhhhHH----HHHHHHHHHhccCCCeEEEE
Confidence              1234579999999996322   222333   44555655    44455555555444455544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.43  E-value=0.0023  Score=43.38  Aligned_cols=112  Identities=13%  Similarity=0.237  Sum_probs=61.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHh---CCccccccCCccchHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSK---GGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   83 (223)
                      ++++.|+|+ |.+|..+|..|+.+|  ..++++|+         ++...+....++...   .........|+       
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~---------~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------   67 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV---------VKDRTKGDALDLEDAQAFTAPKKIYSGEY-------   67 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------SHHHHHHHHHHHHGGGGGSCCCEEEECCG-------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeec---------ccchhHHHHHHHhccccccCCceEeeccH-------
Confidence            457888896 899999999999987  47999987         555444433344321   11111111111       


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                          ++...-|++|.+||.....      ..+-.+.+..|..    +.+.+.+.+.+.....++.+.|
T Consensus        68 ----~~~~~adivvitag~~~~~------g~~r~~l~~~N~~----i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          68 ----SDCKDADLVVITAGAPQKP------GESRLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             ----GGGTTCSEEEECCCC----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred             ----HHhccccEEEEecccccCC------CCCHHHHHHHHHH----HHHHHHHHHhhcCCCcEEEEeC
Confidence                2345789999999853321      1223344455544    4445555556554444554444

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=0.00015  Score=51.70  Aligned_cols=79  Identities=22%  Similarity=0.237  Sum_probs=49.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +++|||+||+||+|...++.....|+++++...        .++++...+.   .+.+.....|..+.. ..+.++++..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~--------~~~e~~~~l~---~~~gad~vi~~~~~~-~~~~~~~~~~   98 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC--------GTQEKCLFLT---SELGFDAAVNYKTGN-VAEQLREACP   98 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEE--------SSHHHHHHHH---HHSCCSEEEETTSSC-HHHHHHHHCT
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceeccc--------chHHHHhhhh---hcccceEEeeccchh-HHHHHHHHhc
Confidence            479999999999999999988888997665422        1333333322   223444444544333 3333443322


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                        ..+|+++.+.|
T Consensus        99 --~GvDvv~D~vG  109 (187)
T d1vj1a2          99 --GGVDVYFDNVG  109 (187)
T ss_dssp             --TCEEEEEESSC
T ss_pred             --cCceEEEecCC
Confidence              36999999987

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.36  E-value=0.0065  Score=41.16  Aligned_cols=119  Identities=17%  Similarity=0.174  Sum_probs=65.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +-.++++.|+|+ |.+|.++|..|+.+|.  .++++|+         ++...+....++...............+     
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di---------~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----   67 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA---------NESKAIGDAMDFNHGKVFAPKPVDIWHG-----   67 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------SHHHHHHHHHHHHHHTTSSSSCCEEEEC-----
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEee---------ccccccchhccHhhCccccCCCeEEEEC-----
Confidence            345678888997 8999999999998874  6999987         5555444444454321111111100000     


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEec
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTAS  151 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  151 (223)
                        -.+.+..-|++|.++|......   .+.   .+.+..|.    .+.+.+.+.+.+. +.+.++++|-
T Consensus        68 --d~~~l~daDvvvitag~~~~~~---~~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          68 --DYDDCRDADLVVICAGANQKPG---ETR---LDLVDKNI----AIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             --CGGGTTTCSEEEECCSCCCCTT---TCS---GGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             --CHHHhccceeEEEecccccccC---cch---hHHHHHHH----HHHHHHHHHHHhhCCCceEEEecC
Confidence              0133457899999998643211   111   12233343    3444555555544 3455555554

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.35  E-value=0.00027  Score=49.70  Aligned_cols=77  Identities=18%  Similarity=0.163  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++         ++.+.+..    ++.+....++..+.. .   .+.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~---------~~~r~~~a----~~lGa~~~i~~~~~~-~---~~~v   88 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGS---------RPICVEAA----KFYGATDILNYKNGH-I---EDQV   88 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECC---------CHHHHHHH----HHHTCSEEECGGGSC-H---HHHH
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccc---------hhhhHHHH----HhhCccccccccchh-H---HHHH
Confidence            4678999986 8999999999988998 6888865         55444332    333443334444332 2   2333


Q ss_pred             HHhc--CCccEEEeccCC
Q psy16220         87 LENF--GRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~--~~id~li~~ag~  102 (223)
                      .+..  ..+|++|.++|.
T Consensus        89 ~~~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          89 MKLTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             HHHTTTSCEEEEEECSSC
T ss_pred             HHHhhccCcceEEEccCC
Confidence            3333  359999999984

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.33  E-value=0.00081  Score=45.92  Aligned_cols=84  Identities=12%  Similarity=0.050  Sum_probs=54.1

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++.+=+++.|+||.|-+|.++|+.|.++|++|.+.+|+.         ....+    .....................+.
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~---------~~~~~----~~~~~~~~v~~~~~~~~~~~v~~   71 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED---------WAVAE----SILANADVVIVSVPINLTLETIE   71 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC---------GGGHH----HHHTTCSEEEECSCGGGHHHHHH
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc---------ccccc----hhhhhccccccccchhhheeeee
Confidence            344557999999999999999999999999999998732         21111    11233444445555556666666


Q ss_pred             HHHHhcCCccEEEeccC
Q psy16220         85 TALENFGRIDIVINNAG  101 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag  101 (223)
                      ++.....+=.+++..+.
T Consensus        72 ~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          72 RLKPYLTENMLLADLTS   88 (152)
T ss_dssp             HHGGGCCTTSEEEECCS
T ss_pred             cccccccCCceEEEecc
Confidence            66554433334554444

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.30  E-value=0.0011  Score=46.60  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.+++|+|+ ||+|...++.+...|+ +|+++++         ++++++.    .++.+....++..+.++....+.+.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~---------~~~kl~~----Ak~~GA~~~in~~~~~~~~~~~~~~   94 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDL---------NKDKFEK----AMAVGATECISPKDSTKPISEVLSE   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CGGGHHH----HHHHTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecC---------cHHHHHH----HHhcCCcEEECccccchHHHHHHHH
Confidence            4789999986 8999999999999995 7888876         5555442    2334555555555444333322222


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      . .-..+|++|.+.|.
T Consensus        95 ~-~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          95 M-TGNNVGYTFEVIGH  109 (176)
T ss_dssp             H-HTSCCCEEEECSCC
T ss_pred             h-ccccceEEEEeCCc
Confidence            1 22479999999984

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.25  E-value=0.001  Score=46.60  Aligned_cols=79  Identities=18%  Similarity=0.255  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccc-hHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVD-GDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   85 (223)
                      .|.++||.|+ +|+|...+..+...|+ +|+++++         ++++.+.    ..+.+.....+..+.++ .+...+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~---------~~~k~~~----a~~~Ga~~~i~~~~~~~~~~~~~~~   93 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDI---------NKDKFAK----AKEVGATECVNPQDYKKPIQEVLTE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CGGGHHH----HHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecC---------cHHHHHH----HHHhCCeeEEecCCchhHHHHHHHH
Confidence            4789999999 6899999999999985 7777765         4444432    23334443344333332 3333333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      .  ..+.+|++|.+.|.
T Consensus        94 ~--~~~G~D~vid~~G~  108 (176)
T d2jhfa2          94 M--SNGGVDFSFEVIGR  108 (176)
T ss_dssp             H--TTSCBSEEEECSCC
T ss_pred             H--hcCCCCEEEecCCc
Confidence            3  22579999999984

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00017  Score=45.23  Aligned_cols=36  Identities=22%  Similarity=0.338  Sum_probs=32.3

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      +++||+++|.|. |.-|+++|+.|.++|++|.+.|..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~   37 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTR   37 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCC
Confidence            578999999998 567999999999999999999863

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.20  E-value=0.0023  Score=44.81  Aligned_cols=117  Identities=13%  Similarity=0.087  Sum_probs=62.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC---C----eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG---A----SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G---~----~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      +|.||||+|.||.+++..|+..+   .    .+.+.+.       ......++...-++..-.........-..      
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di-------~~~~~~l~g~~mdl~d~a~~~~~~~~~~~------   92 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS-------ERSFQALEGVAMELEDSLYPLLREVSIGI------   92 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC-------GGGHHHHHHHHHHHHTTTCTTEEEEEEES------
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecC-------ccccchhcchhhhhcccccccccCccccc------
Confidence            79999999999999999998743   2    3445543       11223333333333322111111111111      


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCcEEEEec
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGRLVMTAS  151 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  151 (223)
                       ...+.+...|++|..+|...   -...+.++   .++.|.    .+++.+.+.+.+. +...+|.+.+
T Consensus        93 -~~~~~~~~aDvVvi~ag~~r---kpg~tR~D---ll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          93 -DPYEVFEDVDWALLIGAKPR---GPGMERAA---LLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             -CHHHHTTTCSEEEECCCCCC---CTTCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -cchhhccCCceEEEeeccCC---CCCCcHHH---HHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence             12345668999999998632   22334443   455554    4555666666663 3344444443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.18  E-value=0.00084  Score=46.77  Aligned_cols=45  Identities=16%  Similarity=0.256  Sum_probs=36.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEI   62 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~   62 (223)
                      ++|.+||.|+ ||-+++++..|.+.|+ ++.++.|         +.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR---------~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYAR---------NVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECS---------CHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecc---------cHHHHHHHHHhh
Confidence            5788999988 7999999999999997 6888876         666666554443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.15  E-value=0.0017  Score=45.46  Aligned_cols=79  Identities=18%  Similarity=0.164  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccc-hHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVD-GDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   85 (223)
                      .|.+++|.|+ ||+|...++.+...|+ +|+++++         ++++++.    .++.+....++..+.++ .+.....
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~---------~~~kl~~----a~~lGa~~~i~~~~~d~~~~~~~~~   92 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGT---------HKDKFPK----AIELGATECLNPKDYDKPIYEVICE   92 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS---------CGGGHHH----HHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCC---------hHHHHHH----HHHcCCcEEEcCCCchhHHHHHHHH
Confidence            4779999986 8999999999999997 5777765         5555433    23345555555444333 2333322


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      .  .-+.+|++|.++|.
T Consensus        93 ~--~~~G~d~vid~~g~  107 (174)
T d1p0fa2          93 K--TNGGVDYAVECAGR  107 (174)
T ss_dssp             H--TTSCBSEEEECSCC
T ss_pred             h--cCCCCcEEEEcCCC
Confidence            2  22479999999884

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.15  E-value=0.0017  Score=45.52  Aligned_cols=79  Identities=19%  Similarity=0.259  Sum_probs=50.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCcc-chHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVV-DGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   85 (223)
                      .|.+++|.|+ |+||...++.+...|++ |++.++         ++.+.+    ..++.+.....+....+ ..+...+.
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~---------~~~r~~----~a~~~Ga~~~i~~~~~~~~~~~~~~~   93 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDI---------NGEKFP----KAKALGATDCLNPRELDKPVQDVITE   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CGGGHH----HHHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeecc---------chHHHH----HHHHhCCCcccCCccchhhhhhhHhh
Confidence            4679999975 99999999999999985 666654         444432    22333444444433333 23343333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      .  .-+.+|++|.++|.
T Consensus        94 ~--~~~G~d~vie~~G~  108 (174)
T d1e3ia2          94 L--TAGGVDYSLDCAGT  108 (174)
T ss_dssp             H--HTSCBSEEEESSCC
T ss_pred             h--hcCCCcEEEEeccc
Confidence            3  23589999999983

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.11  E-value=0.0069  Score=41.30  Aligned_cols=116  Identities=16%  Similarity=0.157  Sum_probs=60.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++.|+||+|.+|.+++..|+..+.       ...+.+.       .++....+....++...............+     
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   73 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI-------PQAMKALEGVVMELEDCAFPLLAGLEATDD-----   73 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC-------GGGHHHHHHHHHHHHTTTCTTEEEEEEESC-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcc-------ccchhhHcCchhhhhccccccccccccCCc-----
Confidence            799999999999999999997653       1222211       113333333333333221111111111111     


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CC-CcEEEEe
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NY-GRLVMTA  150 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~-g~iv~vs  150 (223)
                        ..+.+...|++|.++|...   -...+.+++   +..|+    .+++.+.+.+.+. +. +.++.+|
T Consensus        74 --~~~~~~~advViitaG~~~---~pg~~r~dl---~~~N~----~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          74 --PKVAFKDADYALLVGAAPR---KAGMERRDL---LQVNG----KIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             --HHHHTTTCSEEEECCCCCC---CTTCCHHHH---HHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --hhhhcccccEEEeecCcCC---CCCCcHHHH---HHHHH----HHHHHHHHHHHHhCCCCcEEEEec
Confidence              1234567999999999643   233444444   34444    4555555555653 33 3444444

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00056  Score=47.63  Aligned_cols=74  Identities=23%  Similarity=0.303  Sum_probs=48.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.+++|.|+ |++|...++.+...|++++++++         +.++.+ .   .++.+....++..+...       ..
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~---------~~~~~~-~---a~~lGad~~i~~~~~~~-------~~   88 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT---------SEAKRE-A---AKALGADEVVNSRNADE-------MA   88 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------SGGGHH-H---HHHHTCSEEEETTCHHH-------HH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhcc---------chhHHH-H---HhccCCcEEEECchhhH-------HH
Confidence            4789999986 89999999888888999998876         444332 2   23334444444333221       12


Q ss_pred             HhcCCccEEEeccCC
Q psy16220         88 ENFGRIDIVINNAGI  102 (223)
Q Consensus        88 ~~~~~id~li~~ag~  102 (223)
                      +....+|++|.+.|.
T Consensus        89 ~~~~~~D~vid~~g~  103 (168)
T d1uufa2          89 AHLKSFDFILNTVAA  103 (168)
T ss_dssp             TTTTCEEEEEECCSS
T ss_pred             HhcCCCceeeeeeec
Confidence            233579999999884

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.10  E-value=0.00078  Score=47.18  Aligned_cols=78  Identities=19%  Similarity=0.273  Sum_probs=48.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.+++|.|+ |++|...+..+...|++++++ ++         ++.+.+.    .++.+....++..+ .+..+.+.++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~---------~~~k~~~----a~~~Ga~~~i~~~~-~~~~~~i~~~   92 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDI---------VESRLEL----AKQLGATHVINSKT-QDPVAAIKEI   92 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEES---------CHHHHHH----HHHHTCSEEEETTT-SCHHHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeecc---------HHHHHHH----HHHcCCeEEEeCCC-cCHHHHHHHH
Confidence            4778999987 899999999888889876554 33         4444332    23334443444433 3333333333


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      .  -+.+|++|.+.|.
T Consensus        93 t--~gg~D~vid~~G~  106 (174)
T d1f8fa2          93 T--DGGVNFALESTGS  106 (174)
T ss_dssp             T--TSCEEEEEECSCC
T ss_pred             c--CCCCcEEEEcCCc
Confidence            2  2579999999983

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.10  E-value=0.00038  Score=46.48  Aligned_cols=30  Identities=30%  Similarity=0.535  Sum_probs=28.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++|.|+ |.+|+.+++.|.++|+.|++++.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~   31 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI   31 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecC
Confidence            6899998 89999999999999999999976

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.06  E-value=0.0002  Score=49.09  Aligned_cols=37  Identities=14%  Similarity=0.278  Sum_probs=33.0

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      -++++||++||+||+ .+|..-|+.|++.|++|++++.
T Consensus         8 ~~~l~gkrvLViGgG-~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           8 AHQLKDKRILLIGGG-EVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             EECCTTCEEEEEEES-HHHHHHHHHHGGGTCEEEEEEE
T ss_pred             heeeCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeC
Confidence            456899999999995 6999999999999999999853

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.05  E-value=0.0024  Score=44.10  Aligned_cols=76  Identities=18%  Similarity=0.196  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.+++|.|+ |++|...++.+...|++|+++++         ++.+.+    ..++.+.....+..+.+..+.    +.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~---------~~~~~~----~a~~~Ga~~~i~~~~~~~~~~----~~   88 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDI---------DDAKLE----LARKLGASLTVNARQEDPVEA----IQ   88 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES---------CHHHHH----HHHHTTCSEEEETTTSCHHHH----HH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecc---------hhhHHH----hhhccCccccccccchhHHHH----HH
Confidence            4779999886 89999999888888999999976         555543    233445444444444433333    33


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      +..+..+..|.+++
T Consensus        89 ~~~~g~~~~i~~~~  102 (166)
T d1llua2          89 RDIGGAHGVLVTAV  102 (166)
T ss_dssp             HHHSSEEEEEECCS
T ss_pred             HhhcCCcccccccc
Confidence            33345566565554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.04  E-value=0.00069  Score=47.63  Aligned_cols=80  Identities=24%  Similarity=0.349  Sum_probs=53.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +++||.+||.|++ |.+++++..|.+.| ++.+..|         +.++.+.+.+.+............+..+       
T Consensus        15 ~~~~k~vlIlGaG-G~arai~~aL~~~~-~i~I~nR---------~~~ka~~l~~~~~~~~~~~~~~~~~~~~-------   76 (177)
T d1nvta1          15 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANR---------TVEKAEALAKEIAEKLNKKFGEEVKFSG-------   76 (177)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECS---------SHHHHHHHHHHHHHHHTCCHHHHEEEEC-------
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHcccc-ceeeehh---------hhhHHHHHHHHHHHhhchhhhhhhhhhh-------
Confidence            5789999999875 78999999997766 8999877         8888888877776543221111111111       


Q ss_pred             HHHhcCCccEEEeccCCC
Q psy16220         86 ALENFGRIDIVINNAGIL  103 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~  103 (223)
                      +.......|++||+....
T Consensus        77 ~~~~~~~~dliIn~tp~g   94 (177)
T d1nvta1          77 LDVDLDGVDIIINATPIG   94 (177)
T ss_dssp             TTCCCTTCCEEEECSCTT
T ss_pred             hhhccchhhhhccCCccc
Confidence            111235689999987643

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.00  E-value=0.0074  Score=40.67  Aligned_cols=114  Identities=14%  Similarity=0.217  Sum_probs=61.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+||+|.+|.++|..|+.+|.  .++++|.         +..+.+  ..++...  ..............    ..+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi---------~~~~~~--a~Dl~~~--~~~~~~~~~~~~~~----~~~   64 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI---------AHTPGV--AADLSHI--ETRATVKGYLGPEQ----LPD   64 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES---------SSHHHH--HHHHTTS--SSSCEEEEEESGGG----HHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEec---------cccchh--hHHHhhh--hhhcCCCeEEcCCC----hHH
Confidence            578999999999999999998875  5888875         222221  1122211  11111111111112    122


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEec
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTAS  151 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS  151 (223)
                      .+..-|++|.+||.... +  ..+..   +.++.|..-.    +.+.+.+.+.. .+.++++|.
T Consensus        65 ~~~~aDivVitag~~~~-~--g~sR~---~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          65 CLKGCDVVVIPAGVPRK-P--GMTRD---DLFNTNATIV----ATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             HHTTCSEEEECCSCCCC-T--TCCGG---GGHHHHHHHH----HHHHHHHHHHCTTSEEEECSS
T ss_pred             HhCCCCEEEECCCcCCC-C--CCCcc---hHHHHHHHHH----HHHHHHHHhcCCCeEEEEecC
Confidence            33579999999996322 1  22333   3455555544    44444445544 345555554

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.97  E-value=0.00042  Score=48.41  Aligned_cols=34  Identities=32%  Similarity=0.447  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+|||+||+||+|...++.....|++|+.+++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~   56 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG   56 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEES
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEec
Confidence            3568999999999999999888888999999876

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.88  E-value=0.0036  Score=43.47  Aligned_cols=79  Identities=20%  Similarity=0.242  Sum_probs=48.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   85 (223)
                      .|.++||.|+ +|+|...++.+...|+. |+++++         ++++.+ ..+++   +.....+..+. ++.....+.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~---------~~~k~~-~ak~l---Ga~~~i~~~~~~~~~~~~~~~   93 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDI---------NKDKFA-RAKEF---GATECINPQDFSKPIQEVLIE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS---------CGGGHH-HHHHH---TCSEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcc---------cHHHHH-HHHHh---CCcEEEeCCchhhHHHHHHHH
Confidence            4779999998 59999999999989975 555443         344432 23333   44444444332 233343333


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      .  .-+.+|++|.+.|.
T Consensus        94 ~--~~~g~D~vid~~G~  108 (176)
T d2fzwa2          94 M--TDGGVDYSFECIGN  108 (176)
T ss_dssp             H--TTSCBSEEEECSCC
T ss_pred             H--cCCCCcEeeecCCC
Confidence            3  22479999999983

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.00076  Score=47.48  Aligned_cols=33  Identities=33%  Similarity=0.404  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.++||+||+||+|...++.....|++|+.+++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~   64 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG   64 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEec
Confidence            458999999999999999988889999999876

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.81  E-value=0.0097  Score=41.31  Aligned_cols=32  Identities=31%  Similarity=0.447  Sum_probs=29.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +|++.|+|+ |.+|.++|..|+++|++|.+.+|
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r   32 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDI   32 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEEC
Confidence            478899998 79999999999999999999987

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.81  E-value=0.023  Score=38.81  Aligned_cols=120  Identities=12%  Similarity=0.133  Sum_probs=66.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHH
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKI   82 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
                      ..++..++.|+|+ |.+|..+|..|+.+|.  .++++|+         +....+....++........... .... .. 
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~---------~~~~a~g~alDl~~~~~~~~~~~-~~~~-~d-   81 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDA---------DTDKLRGEALDLQHGSLFLSTPK-IVFG-KD-   81 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECS---------CHHHHHHHHHHHHHTTTTCSCCE-EEEE-SS-
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC---------CchhhhccHHHHhCcchhcCCCe-EEec-cc-
Confidence            3455567888896 9999999999998874  6999986         55555444445543211111100 0000 00 


Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEec
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTAS  151 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS  151 (223)
                          .+....-|++|.+||......   .+..+   .++.    ...+.+.+.+.+.+.. .+.++++|-
T Consensus        82 ----~~~~~~adivvitag~~~~~~---~~R~d---ll~~----N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          82 ----YNVSANSKLVIITAGARMVSG---QTRLD---LLQR----NVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             ----GGGGTTEEEEEECCSCCCCTT---TCSSC---TTHH----HHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             ----hhhhccccEEEEecccccCCC---CCHHH---HHHH----HHHHHHHHHHHHhccCCCeEEEEeCC
Confidence                123457899999998643321   12111   1222    3344556666666544 355555554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.81  E-value=0.011  Score=39.91  Aligned_cols=118  Identities=14%  Similarity=0.164  Sum_probs=62.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCC-ccchHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNS-VVDGDKIVQTA   86 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   86 (223)
                      |++.|+|+ |.+|.++|..|+.+|.  .++++|+         ++...+....++.........+..- ..+        
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di---------~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d--------   63 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDA---------NEAKVKADQIDFQDAMANLEAHGNIVIND--------   63 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------SHHHHHHHHHHHHHHGGGSSSCCEEEESC--------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEec---------ccchhhhHHHhhhccccccCCccceeccC--------
Confidence            56778895 8999999999998873  7999887         5554444333444321111111000 011        


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      .+....-|++|.+||......  +-...+-.+.++.|.    .+++.+.+.+.+.....++.+-|
T Consensus        64 ~~~l~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          64 WAALADADVVISTLGNIKLQQ--DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             GGGGTTCSEEEECCSCGGGTC---------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHHhccccEEEEecccccccc--ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEec
Confidence            123356899999999643210  000111122333443    45566666667654444444444

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.76  E-value=0.0056  Score=42.48  Aligned_cols=79  Identities=18%  Similarity=0.286  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccch-HHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDG-DKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   85 (223)
                      .|.+++|.|+ +|+|...+..++..|+ +|+++++         ++++++    ..++.+....++..+..+. +...+.
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~---------~~~rl~----~a~~~GAd~~in~~~~~~~~~~~~~~   93 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDL---------NPDKFE----KAKVFGATDFVNPNDHSEPISQVLSK   93 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS---------CGGGHH----HHHHTTCCEEECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecc---------hHHHHH----HHHHcCCcEEEcCCCcchhHHHHHHh
Confidence            4678999986 6788888888888876 5777765         444443    2344455555555444433 222222


Q ss_pred             HHHhcCCccEEEeccCC
Q psy16220         86 ALENFGRIDIVINNAGI  102 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~  102 (223)
                      .  .-+.+|+++.+.|.
T Consensus        94 ~--~~~G~d~vid~~G~  108 (175)
T d1cdoa2          94 M--TNGGVDFSLECVGN  108 (175)
T ss_dssp             H--HTSCBSEEEECSCC
T ss_pred             h--ccCCcceeeeecCC
Confidence            2  22479999999984

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.73  E-value=0.021  Score=38.78  Aligned_cols=33  Identities=24%  Similarity=0.344  Sum_probs=27.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      +.+++.|+|+ |.+|..+|..++..+. +++++|.
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~   39 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDV   39 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEe
Confidence            4567777897 8999999988888884 7999886

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.002  Score=45.89  Aligned_cols=31  Identities=29%  Similarity=0.379  Sum_probs=28.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      |++.|.|+ |-+|..+|..++..|+.|++.|+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~   35 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQ   35 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEEC
Confidence            58889999 67999999999999999999987

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.70  E-value=0.0047  Score=40.32  Aligned_cols=62  Identities=16%  Similarity=0.124  Sum_probs=42.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP   71 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (223)
                      +++++|.||+ .+|..+|..|+++|.+|.++.+.+......-+..-.+.+.+.+++.+..+..
T Consensus        30 ~~~vvIIGgG-~iG~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~~l~~~GV~i~~   91 (121)
T d1d7ya2          30 QSRLLIVGGG-VIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF   91 (121)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCeEEEECcc-hhHHHHHHHhhcccceEEEEeeccccccccCCHHHHHHHHHHHHHCCcEEEe
Confidence            5778777765 9999999999999999999988655432222333344445566666655443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.68  E-value=0.0082  Score=41.17  Aligned_cols=76  Identities=21%  Similarity=0.254  Sum_probs=47.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.++||.|+ |++|...++.+...|++|+++++         ++++.+    .+++.+.....+..+.+ ....+   .
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~---------~~~r~~----~~k~~Ga~~~~~~~~~~-~~~~~---~   88 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI---------GDEKLE----LAKELGADLVVNPLKED-AAKFM---K   88 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS---------CHHHHH----HHHHTTCSEEECTTTSC-HHHHH---H
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCC---------CHHHhh----hhhhcCcceecccccch-hhhhc---c
Confidence            3678999875 89999988888889999999865         555443    33444555555544443 22222   2


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      +.....+.+|.+++
T Consensus        89 ~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          89 EKVGGVHAAVVTAV  102 (168)
T ss_dssp             HHHSSEEEEEESSC
T ss_pred             cccCCCceEEeecC
Confidence            22345566666665

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.61  E-value=0.0041  Score=43.18  Aligned_cols=78  Identities=15%  Similarity=0.222  Sum_probs=46.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.+++|.|+ |++|...++.+...|+ .|+++++         ++.+.+    .+++.+.....+.. .+..+...+..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~---------~~~k~~----~~~~~ga~~~i~~~-~~~~~~~~~~~   96 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV---------KEEKLK----LAERLGADHVVDAR-RDPVKQVMELT   96 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES---------SHHHHH----HHHHTTCSEEEETT-SCHHHHHHHHT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccc---------hhHHHH----HHhhcccceeecCc-ccHHHHHHHhh
Confidence            3678999886 9999999998888887 4555554         444433    23334444333322 22233322211


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                        .-..+|++|.++|.
T Consensus        97 --~~~g~d~vid~~g~  110 (172)
T d1h2ba2          97 --RGRGVNVAMDFVGS  110 (172)
T ss_dssp             --TTCCEEEEEESSCC
T ss_pred             --CCCCceEEEEecCc
Confidence              11369999999983

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.58  E-value=0.0075  Score=42.81  Aligned_cols=80  Identities=20%  Similarity=0.218  Sum_probs=49.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.++||.|+ +++|...+..+...|+ +|+++++         ++.+++    ..++.+.....+..+ .+..+.+.++
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~---------~~~rl~----~a~~~Ga~~~~~~~~-~~~~~~i~~~   89 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDL---------NPARLA----HAKAQGFEIADLSLD-TPLHEQIAAL   89 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES---------CHHHHH----HHHHTTCEEEETTSS-SCHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecc---------cchhhH----hhhhccccEEEeCCC-cCHHHHHHHH
Confidence            4779999986 7999888888877787 6777765         444443    223334443333333 3343333333


Q ss_pred             HHhcCCccEEEeccCCC
Q psy16220         87 LENFGRIDIVINNAGIL  103 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~  103 (223)
                      . .-..+|++|.+.|.-
T Consensus        90 t-~g~g~D~vid~vG~~  105 (195)
T d1kola2          90 L-GEPEVDCAVDAVGFE  105 (195)
T ss_dssp             H-SSSCEEEEEECCCTT
T ss_pred             h-CCCCcEEEEECcccc
Confidence            2 224699999998843

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.56  E-value=0.0053  Score=40.17  Aligned_cols=61  Identities=21%  Similarity=0.221  Sum_probs=40.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      +.|.++|.||+ .+|..+|..|++.|.+|.++.+.+......-+++-.+...+.+++.+..+
T Consensus        29 ~~k~vvViGgG-~iG~E~A~~l~~~g~~Vtlie~~~~~l~~~~d~~~~~~~~~~l~~~gv~~   89 (123)
T d1nhpa2          29 EVNNVVVIGSG-YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITI   89 (123)
T ss_dssp             TCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEE
T ss_pred             CCCEEEEECCh-HHHHHHHHHhhccceEEEEEEecCcccccccchhhHHHHHHHhhcCCeEE
Confidence            46788888654 99999999999999999999875443222223333344444555554433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.54  E-value=0.057  Score=36.78  Aligned_cols=120  Identities=12%  Similarity=0.143  Sum_probs=67.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ...++++-|+|+ |.+|.++|..|+.+|.  .++++|+         +++..+....++.....  ...........   
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~---------~~~~a~g~alDl~h~~~--~~~~~~~~~~~---   81 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDV---------LEDKLKGEMMDLQHGSL--FLQTPKIVADK---   81 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS---------CHHHHHHHHHHHHHTGG--GCCCSEEEECS---
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEe---------ccchhHHHHHHHhcccc--ccCCCeEEecc---
Confidence            345678888896 8999999999999985  6999987         55555444444433110  00000000000   


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEecC
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTASN  152 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~  152 (223)
                        -.+....-|++|.+||.....   ..+..   +.++.|    ..+.+.+.+.+.+... +-++++|-.
T Consensus        82 --d~~~~~~adiVVitAg~~~~~---g~tR~---~l~~~N----~~i~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          82 --DYSVTANSKIVVVTAGVRQQE---GESRL---NLVQRN----VNVFKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             --SGGGGTTCSEEEECCSCCCCT---TCCGG---GGHHHH----HHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             --chhhcccccEEEEecCCcccc---CcchH---HHHHHH----HHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence              012345799999999964321   22222   233334    3456666666676543 455555543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.052  Score=36.33  Aligned_cols=114  Identities=18%  Similarity=0.296  Sum_probs=60.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc---CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc-ccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER---GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP-NYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~---G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   86 (223)
                      ++.|+|++|.+|.++|..|+.+   +..+++.|.         .+ ..+...-++......... ......+.+      
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~---------~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~------   65 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI---------AP-VTPGVAVDLSHIPTAVKIKGFSGEDATP------   65 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECS---------ST-THHHHHHHHHTSCSSCEEEEECSSCCHH------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecc---------cc-cchhHHHHHHCCccccCCcEEEcCCCcc------
Confidence            6889999999999999888644   467888875         21 122222234332111111 111111111      


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEecC
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTASN  152 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~  152 (223)
                        .+..-|++|.+||....   ...+..+   .++.|..    +.+.+.+.+.+.. ++.++++|..
T Consensus        66 --~~~~aDvvvitaG~~~k---~g~~R~d---l~~~N~~----i~~~v~~~i~~~~p~aivivvtNP  120 (145)
T d2cmda1          66 --ALEGADVVLISAGVRRK---PGMDRSD---LFNVNAG----IVKNLVQQVAKTCPKACIGIITNP  120 (145)
T ss_dssp             --HHTTCSEEEECCSCCCC---TTCCGGG---GHHHHHH----HHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             --ccCCCCEEEECCCccCC---CCcchhh---HHHHHHH----HHHHHHHHHHhhCCCcEEEEccCC
Confidence              12357999999996432   1223333   3455544    4444444445443 3556666654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.47  E-value=0.056  Score=35.89  Aligned_cols=113  Identities=18%  Similarity=0.173  Sum_probs=61.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|+ |.+|.++|..++.++  .+++++|+         ++...+....++...............+        .+
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di---------~~~~~~g~~~Dl~~~~~~~~~~~~~~~~--------~~   63 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDV---------DKKRAEGDALDLIHGTPFTRRANIYAGD--------YA   63 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS---------SHHHHHHHHHHHHHHGGGSCCCEEEECC--------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEec---------ccccccchhccccccccccccccccCCc--------HH
Confidence            5677896 899999999998876  47999987         5554444333433211100000000001        12


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      .+..-|++|.+||....   ...+..   +.+..|.    .+.+.+.+.+.+..+..++.+-|
T Consensus        64 ~~~~adivvitag~~~~---~g~~r~---dl~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          64 DLKGSDVVIVAAGVPQK---PGETRL---QLLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             GGTTCSEEEECCCCCCC---SSCCHH---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             HhcCCCEEEEecccccC---CCcchh---hhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence            34578999999986432   122332   3344443    35566666666654344444433

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.45  E-value=0.0087  Score=41.05  Aligned_cols=30  Identities=27%  Similarity=0.146  Sum_probs=26.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.|+|. |-+|.++|+.|.++|++|++.+|
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~   31 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSR   31 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEEC
Confidence            4677765 89999999999999999999987

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.39  E-value=0.016  Score=39.34  Aligned_cols=116  Identities=14%  Similarity=0.188  Sum_probs=59.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-------SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIV   83 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
                      ++.|+||+|.+|.+++-.|+..+.       .+++.+.       .++....+.+..++............-..+     
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----   72 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI-------TPMMGVLDGVLMELQDCALPLLKDVIATDK-----   72 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECC-------GGGHHHHHHHHHHHHHTCCTTEEEEEEESC-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecC-------ccchhhhhhhhhhhcccccccccccccCcc-----
Confidence            789999999999999999986542       3555543       123333444333333221111100000011     


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCc-EEEEe
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQ-NYGR-LVMTA  150 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~-iv~vs  150 (223)
                        ..+.+...|++|.++|.....   ..+.++   .++.|.    .+++.+.+.+.+. +..- ++.+|
T Consensus        73 --~~~~~~~~dvVVitag~~~~~---g~sr~d---ll~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          73 --EEIAFKDLDVAILVGSMPRRD---GMERKD---LLKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             --HHHHTTTCSEEEECCSCCCCT---TCCTTT---THHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --cccccCCceEEEEecccCCCC---CCchhH---HHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence              123456799999999964322   223332   233443    4555566665553 3333 44444

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.38  E-value=0.038  Score=36.82  Aligned_cols=30  Identities=33%  Similarity=0.457  Sum_probs=25.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG--ASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r   41 (223)
                      ++.|+|+ |.+|.+++..|+.+|  ..++++|+
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di   33 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDV   33 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEecc
Confidence            5777896 899999999999887  47999987

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.27  E-value=0.003  Score=44.67  Aligned_cols=43  Identities=26%  Similarity=0.406  Sum_probs=34.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEI   62 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~   62 (223)
                      |++.|+|+ |-+|..+|..++..|++|++.|+         +++.++...+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~---------~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDI---------NEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECS---------SHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEC---------CHHHHhhhhhhh
Confidence            46888998 78999999999999999999987         555555444443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.27  E-value=0.014  Score=38.60  Aligned_cols=62  Identities=15%  Similarity=0.061  Sum_probs=42.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      ++++++|.||+ .+|.++|..|++.|.+|.++.+.+......-++.-.+.+.+.+++.+..+.
T Consensus        34 ~~k~v~VIGgG-~iG~E~A~~l~~~g~~Vtvie~~~~~l~~~~~~~~~~~~~~~~~~~GV~i~   95 (133)
T d1q1ra2          34 ADNRLVVIGGG-YIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIR   95 (133)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred             cCCEEEEECCc-hHHHHHHHHHHhhCcceeeeeecccccccccchhhhhhhhhcccccccEEE
Confidence            35788888765 999999999999999999998866543222222333344455666665443

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.26  E-value=0.023  Score=37.98  Aligned_cols=111  Identities=14%  Similarity=0.217  Sum_probs=58.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHH----hCCccccc-cCCccchHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRS----KGGKAVPN-YNSVVDGDKIV   83 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~   83 (223)
                      +++-|+|+ |.+|.++|-.|+.++. +++++|.         ++...+....++..    ........ ..|        
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~---------~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d--------   63 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDI---------VEGVPQGKALDLYEASPIEGFDVRVTGTNN--------   63 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS---------SSSHHHHHHHHHHTTHHHHTCCCCEEEESC--------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEee---------ccccchhHHHHhhccccccCCCCEEEecCc--------
Confidence            46677786 9999999999998874 8888876         33222222222211    11111110 111        


Q ss_pred             HHHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         84 QTALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        84 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                         .+....-|++|.+||.....   ..   +-.+.++.|.    .+++.+.+.+.+..+..++.+.|
T Consensus        64 ---~~~~~~advvvitag~~~~~---~~---~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          64 ---YADTANSDVIVVTSGAPRKP---GM---SREDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             ---GGGGTTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             ---HHHhcCCCEEEEeeeccCCc---Cc---chhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence               12234689999999964321   11   2223344444    46667777777654444444444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.25  E-value=0.034  Score=37.15  Aligned_cols=113  Identities=15%  Similarity=0.137  Sum_probs=58.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|+ |.+|.++|..++.+|.  .++++|++         +...+....++..... ..   .......    ...+
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~---------~~~~~g~a~Dl~~~~~-~~---~~~~~~~----~~~~   64 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVF---------KEKAIGEAMDINHGLP-FM---GQMSLYA----GDYS   64 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC------------CCHHHHHHTTSCC-CT---TCEEEC------CGG
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEecc---------CCccceeeeeeccCcc-cC---CCeeEee----CcHH
Confidence            4566787 9999999999998875  79999873         3333333333432111 00   0000000    1123


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCcEEEEec
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQN-YGRLVMTAS  151 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~vsS  151 (223)
                      ....-|++|.+||.... +  ..+   -.+.++.|.    .+.+.+.+.+.+.. .+.++++|-
T Consensus        65 ~~~~adivvitag~~~~-~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          65 DVKDCDVIVVTAGANRK-P--GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             GGTTCSEEEECCCC---------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             HhCCCceEEEecccccC-c--Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            45678999999995422 1  122   234455555    45555555556543 354555544

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.21  E-value=0.082  Score=35.18  Aligned_cols=113  Identities=17%  Similarity=0.145  Sum_probs=63.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHH---hCCccccccCCccchHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRS---KGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      ++.|+|++|.+|.++|..++.+|.  .++++|++       .+....+....++..   .......-..++         
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~-------~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---------   65 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP-------DKEDDTVGQAADTNHGIAYDSNTRVRQGGY---------   65 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG-------GGHHHHHHHHHHHHHHHTTTCCCEEEECCG---------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecC-------CcccccceeecchhhcccccCCceEeeCCH---------
Confidence            678999999999999999998875  58888751       112222222223332   111111111111         


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEec
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTAS  151 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS  151 (223)
                        +....-|++|.+||... ++  ..+   -.+.++.|..    +++.+.+.+.+... +.++.+|-
T Consensus        66 --~~~~~aDiVvitaG~~~-~~--g~~---R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          66 --EDTAGSDVVVITAGIPR-QP--GQT---RIDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             --GGGTTCSEEEECCCCCC-CT--TCC---HHHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCS
T ss_pred             --HHhhhcCEEEEeccccc-cc--CCc---hhhHHHHHHH----HHHHHHHHHHhcCCCceEEEecC
Confidence              23457999999999532 21  223   3345555554    55556666676543 45555544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.16  E-value=0.014  Score=37.93  Aligned_cols=59  Identities=15%  Similarity=0.213  Sum_probs=41.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      |.++|.||+ -||..+|..|++.|++|.++.+.+...+ .-+..-.+.+.+.+++.+..+.
T Consensus        24 ~~~vIiG~G-~ig~E~A~~l~~lG~~Vtii~~~~~~l~-~~d~ei~~~l~~~l~~~GV~i~   82 (122)
T d1v59a2          24 KRLTIIGGG-IIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQKFLKKQGLDFK   82 (122)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHHHHHHHTTCEEE
T ss_pred             CeEEEECCC-chHHHHHHHHHhhCcceeEEEeccccch-hhhhhhHHHHHHHHHhccceEE
Confidence            578888775 9999999999999999999988654432 2344444555556666654443

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.014  Score=38.15  Aligned_cols=60  Identities=15%  Similarity=0.151  Sum_probs=44.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP   71 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (223)
                      |+++|.||+ .||..+|..|++.|.+|.++.|...-.+ .-+....+.+.+.+++++..+..
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~~l~-~~d~~~~~~~~~~l~~~Gv~i~~   82 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGVEVLK   82 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTCEEET
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecccccc-chhhHHHHHHHHHHHHCCCEEEe
Confidence            678888876 7999999999999999999998654432 23444555566677776655543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.11  E-value=0.015  Score=37.47  Aligned_cols=57  Identities=21%  Similarity=0.317  Sum_probs=38.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK   68 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (223)
                      |.++|.||+ .+|..+|..|++.|.+|.++.|...-.+ .-+..-.+.+.+.+++++..
T Consensus        23 ~~v~IiGgG-~ig~E~A~~l~~~G~~Vtlve~~~~il~-~~d~~~~~~l~~~l~~~GI~   79 (117)
T d1ebda2          23 KSLVVIGGG-YIGIELGTAYANFGTKVTILEGAGEILS-GFEKQMAAIIKKRLKKKGVE   79 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTCE
T ss_pred             CeEEEECCC-ccceeeeeeecccccEEEEEEecceecc-cccchhHHHHHHHHHhcCCE
Confidence            678888875 9999999999999999999987554322 12333334444455555443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.08  E-value=0.013  Score=38.23  Aligned_cols=59  Identities=17%  Similarity=0.228  Sum_probs=42.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      +.++|+||+ -||..+|..|.+.|.+|.++.|.....+ ..+..-.+.+.+.+++.+..+.
T Consensus        26 ~~~viiG~G-~iglE~A~~~~~~G~~Vtvi~~~~~~l~-~~d~~~~~~l~~~l~~~GI~i~   84 (123)
T d1dxla2          26 KKLVVIGAG-YIGLEMGSVWGRIGSEVTVVEFASEIVP-TMDAEIRKQFQRSLEKQGMKFK   84 (123)
T ss_dssp             SEEEESCCS-HHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHSSCCEE
T ss_pred             CeEEEEccc-hHHHHHHHHHHhcCCeEEEEEEccccCc-hhhhcchhhhhhhhhcccceEE
Confidence            577777765 9999999999999999999988665442 3344555556666776665443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.03  E-value=0.016  Score=37.42  Aligned_cols=60  Identities=8%  Similarity=0.102  Sum_probs=41.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      -|+++|.||+ .+|.++|..|++.|.+|.++.|...-.+ .-+..-.+...+.+++.+..+.
T Consensus        22 p~~v~IiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~~il~-~~d~~~~~~~~~~l~~~gV~i~   81 (117)
T d1onfa2          22 SKKIGIVGSG-YIAVELINVIKRLGIDSYIFARGNRILR-KFDESVINVLENDMKKNNINIV   81 (117)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTCEEE
T ss_pred             CCEEEEECCc-hHHHHHHHHHHhccccceeeehhccccc-cccHHHHHHHHHHHHhCCCEEE
Confidence            3677777765 9999999999999999999988654332 2233444555556666655543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.02  E-value=0.0027  Score=42.09  Aligned_cols=31  Identities=26%  Similarity=0.309  Sum_probs=27.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      |.++|.|+ |.+|+.+|+.|.++|+.|++++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~   31 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDI   31 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecC
Confidence            45778866 79999999999999999999976

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.00  E-value=0.031  Score=38.05  Aligned_cols=30  Identities=27%  Similarity=0.280  Sum_probs=25.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++-|+|- |-+|.++|+.|+++|++|++.+|
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~   31 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDR   31 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeC
Confidence            3555654 79999999999999999999987

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.0092  Score=41.07  Aligned_cols=38  Identities=26%  Similarity=0.321  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|.|.+.-+|+-++..|.++|++|.++..
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~   69 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR   69 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhcccccccc
Confidence            35789999999999999999999999999999998854

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.0058  Score=41.79  Aligned_cols=33  Identities=24%  Similarity=0.177  Sum_probs=29.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      +++|+|+ |.+|..++..|++.|++|.+++|...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            6889988 99999999999999999999998543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.89  E-value=0.026  Score=36.25  Aligned_cols=60  Identities=17%  Similarity=0.175  Sum_probs=42.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP   71 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (223)
                      |.++|.||+ .+|..+|..|.+.|.+|.++.|.+...+ .-+..-.+.+.+.+++++..+..
T Consensus        22 ~~vvIiGgG-~ig~E~A~~l~~~G~~Vtlve~~~~~l~-~~d~~~~~~~~~~l~~~GV~~~~   81 (116)
T d1gesa2          22 ERVAVVGAG-YIGVELGGVINGLGAKTHLFEMFDAPLP-SFDPMISETLVEVMNAEGPQLHT   81 (116)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHSCEEEC
T ss_pred             CEEEEECCC-hhhHHHHHHhhccccEEEEEeecchhhh-hcchhhHHHHHHHHHHCCCEEEe
Confidence            567777764 9999999999999999999988654322 22344445556667777665543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.80  E-value=0.018  Score=37.41  Aligned_cols=59  Identities=25%  Similarity=0.247  Sum_probs=40.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      .+.++|.||+ .+|..+|..|++.|++|.++.+.+.-..  -+.+-.+.+.+.+++.+..+.
T Consensus        32 ~~~vvIiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~~l~~--~d~~~~~~~~~~l~~~GV~~~   90 (122)
T d1xhca2          32 SGEAIIIGGG-FIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFF   90 (122)
T ss_dssp             HSEEEEEECS-HHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEE
T ss_pred             CCcEEEECCc-HHHHHHHHHhhcccceEEEEeccccccC--CCHHHHHHHHHHHHHCCcEEE
Confidence            3577777765 9999999999999999999987544321  233334445556666554443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.78  E-value=0.04  Score=37.17  Aligned_cols=31  Identities=23%  Similarity=0.418  Sum_probs=24.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA-SVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r   41 (223)
                      .++-|+|+ |.+|.++|..++.++. +++++|+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di   35 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDI   35 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEec
Confidence            36777895 8999999987777763 7888887

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.76  E-value=0.034  Score=38.46  Aligned_cols=31  Identities=19%  Similarity=0.239  Sum_probs=27.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.+-|+|- |-+|.++|+.|+++|++|++.+|
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr   33 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNR   33 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECS
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcC
Confidence            34666766 79999999999999999999988

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.69  E-value=0.15  Score=33.88  Aligned_cols=114  Identities=19%  Similarity=0.258  Sum_probs=61.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|+|+ |.+|.++|..++.+|.  .++++|+         ++...+....++......  ...........     .+
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~---------~~~~~~g~a~Dl~~a~~~--~~~~~i~~~~~-----~~   65 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDI---------AKERVEAEVLDMQHGSSF--YPTVSIDGSDD-----PE   65 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS---------SHHHHHHHHHHHHHTGGG--STTCEEEEESC-----GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEe---------ccccchhHHHHHHhcccc--CCCceeecCCC-----HH
Confidence            4667786 9999999999998875  6999987         555444433344331110  00000000000     12


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CcEEEEec
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNY-GRLVMTAS  151 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~vsS  151 (223)
                      ....-|++|.+||....   ...+..   +.+..|..    +.+.+.+.+.+... +.++++|-
T Consensus        66 ~~~daDvVVitaG~~~~---~g~~R~---dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          66 ICRDADMVVITAGPRQK---PGQSRL---ELVGATVN----ILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             GGTTCSEEEECCCCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHHCTTSEEEECCS
T ss_pred             HhhCCcEEEEecccccC---CCCchh---hhhhhhHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence            23468999999996322   123333   34555554    45555555565543 44444443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.012  Score=40.72  Aligned_cols=38  Identities=29%  Similarity=0.283  Sum_probs=35.4

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .++++||.++|.|.+.-+|+-++..|+++|+.|.+++.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~   71 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS   71 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence            46789999999999999999999999999999999865

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.64  E-value=0.014  Score=41.66  Aligned_cols=35  Identities=40%  Similarity=0.551  Sum_probs=31.7

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++||+++|-| .|.+|..+|+.|.+.|++|++.+.
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~   58 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADT   58 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecc
Confidence            58999999887 668999999999999999999875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.58  E-value=0.032  Score=35.67  Aligned_cols=59  Identities=17%  Similarity=0.160  Sum_probs=41.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      +.++|.|| |.+|..+|..|.+.|++|.++.+.+.-.+ .-+.+-.+.+.+.+++.+..+.
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~il~-~~d~~~~~~l~~~l~~~gV~i~   80 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKKLGIALH   80 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccccc-cccchhHHHHHHHHHhhcceEE
Confidence            57777765 59999999999999999999988654332 2233444455666777665543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.51  E-value=0.053  Score=36.99  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=25.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGA--SVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r   41 (223)
                      |+++|+|. |-||.++|+.|.+.|+  +|+..|+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~   34 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDI   34 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEEC
Confidence            36888875 8999999999999996  5777766

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.44  E-value=0.044  Score=35.17  Aligned_cols=60  Identities=15%  Similarity=0.200  Sum_probs=41.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      .+|.++|.||+ -+|..+|..|++.|.+|.++.|.+...+ ..+..-.....+.++..+..+
T Consensus        21 ~~~~vvVvGgG-~ig~E~A~~l~~~g~~vt~i~~~~~~l~-~~d~~~~~~~~~~l~~~gI~v   80 (121)
T d1mo9a2          21 PGSTVVVVGGS-KTAVEYGCFFNATGRRTVMLVRTEPLKL-IKDNETRAYVLDRMKEQGMEI   80 (121)
T ss_dssp             CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCTTTT-CCSHHHHHHHHHHHHHTTCEE
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHhcchhheEeeccchhhc-ccccchhhhhhhhhhccccEE
Confidence            36788877765 9999999999999999999988654332 333444445555566655443

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.43  E-value=0.047  Score=35.12  Aligned_cols=59  Identities=22%  Similarity=0.141  Sum_probs=41.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      -+.++|.||+ -||..+|..|++.|++|.++.+...-.+ .-+.+-...+.+.+++.+..+
T Consensus        22 p~~i~IiG~G-~ig~E~A~~l~~~G~~Vtiv~~~~~ll~-~~d~ei~~~l~~~l~~~Gv~i   80 (119)
T d3lada2          22 PGKLGVIGAG-VIGLELGSVWARLGAEVTVLEAMDKFLP-AVDEQVAKEAQKILTKQGLKI   80 (119)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTEEE
T ss_pred             CCeEEEECCC-hHHHHHHHHHHHcCCceEEEEeecccCC-cccchhHHHHHHHHHhcCcee
Confidence            3678888875 9999999999999999999987554322 233444445555666655443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.40  E-value=0.085  Score=36.57  Aligned_cols=37  Identities=30%  Similarity=0.412  Sum_probs=32.0

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      .+.|.++|+||+ .-|.+.|..|+++|++|+++.+.+.
T Consensus        41 ~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccCc
Confidence            457899999876 8899999999999999999987653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.36  E-value=0.049  Score=37.31  Aligned_cols=87  Identities=15%  Similarity=0.192  Sum_probs=54.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      -.+++|.|+. --|+..++-....|+.|.++|+         +.+.++++...+...   +.....+.   +.+ +   +
T Consensus        32 pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~---------~~~~l~~l~~~~~~~---~~~~~~~~---~~l-~---~   91 (168)
T d1pjca1          32 PGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDI---------NVERLSYLETLFGSR---VELLYSNS---AEI-E---T   91 (168)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHGGG---SEEEECCH---HHH-H---H
T ss_pred             CcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeC---------cHHHHHHHHHhhccc---ceeehhhh---hhH-H---H
Confidence            3478888875 7788888889999999999987         666666554444332   22222222   222 2   2


Q ss_pred             hcCCccEEEeccCCCCCCCCCCCCHHH
Q psy16220         89 NFGRIDIVINNAGILRDKSFARISDTD  115 (223)
Q Consensus        89 ~~~~id~li~~ag~~~~~~~~~~~~~~  115 (223)
                      .....|++|.++-+.......-++.+.
T Consensus        92 ~~~~aDivI~aalipG~~aP~lIt~~m  118 (168)
T d1pjca1          92 AVAEADLLIGAVLVPGRRAPILVPASL  118 (168)
T ss_dssp             HHHTCSEEEECCCCTTSSCCCCBCHHH
T ss_pred             hhccCcEEEEeeecCCcccCeeecHHH
Confidence            223589999999866554444455554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.03  Score=40.94  Aligned_cols=37  Identities=22%  Similarity=0.378  Sum_probs=31.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      .+++++|+|.| .||+|..++..|+..|. ++.++|.+.
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            36678999999 56899999999999997 788887644

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.29  E-value=0.015  Score=40.19  Aligned_cols=37  Identities=38%  Similarity=0.488  Sum_probs=34.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++||.++|+|-|.=+|+-+|..|+++|+.|..++.
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~   61 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDV   61 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecc
Confidence            4789999999999999999999999999999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.23  E-value=0.025  Score=36.66  Aligned_cols=57  Identities=23%  Similarity=0.135  Sum_probs=39.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      +.++|+||+ -||.++|..|.+.|.+|.++.|+. .. ..-+.+-...+.+.+++++..+
T Consensus        21 ~~vvIIGgG-~iG~E~A~~l~~lG~~Vtii~~~~-~l-~~~D~~~~~~l~~~l~~~Gv~i   77 (122)
T d1h6va2          21 GKTLVVGAS-YVALECAGFLAGIGLDVTVMVRSI-LL-RGFDQDMANKIGEHMEEHGIKF   77 (122)
T ss_dssp             CSEEEECCS-HHHHHHHHHHHHTTCCEEEEESSS-SS-TTSCHHHHHHHHHHHHHTTEEE
T ss_pred             CeEEEECCC-ccHHHHHHHHhhcCCeEEEEEech-hh-ccCCHHHHHHHHHHHHHCCCEE
Confidence            467777765 999999999999999999998742 21 2223444455556666665444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.18  E-value=0.23  Score=32.84  Aligned_cols=113  Identities=11%  Similarity=0.114  Sum_probs=60.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++.|+|+ |.+|.++|..++.+|.  .++++|+         +++..+....++....  ......+.-..+        
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di---------~~~~~~g~alDl~~~~~~~~~~~~i~~~~d--------   63 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI---------AEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--------   63 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS---------SHHHHHHHHHHHHHHHHTTTCCCEEEEESC--------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEec---------ccchhhHHHHHHhhhccccCCCCccccCCC--------
Confidence            5777886 9999999999998874  5999887         4544443333333211  100000110111        


Q ss_pred             HHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEec
Q psy16220         87 LENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTAS  151 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS  151 (223)
                      .+.+..-|++|.+||....   ...+.   .+.+..|..    +.+.+.+.+.+.....++.+.|
T Consensus        64 ~~~~~~adiVvitag~~~~---~g~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          64 YSLLKGSEIIVVTAGLARK---PGMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             GGGGTTCSEEEECCCCCCC---SSCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECS
T ss_pred             HHHhccccEEEEeccccCC---CCCch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEec
Confidence            1234578999999985332   12222   334444444    4555555556644334444444

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.12  E-value=0.037  Score=36.26  Aligned_cols=73  Identities=15%  Similarity=0.250  Sum_probs=53.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEc-cCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVND-LGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++.|.|++|..|+++++.+.++|+.++... ++        +....         ....+..|++..+.....++...+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~--------~~~~~---------~~~DVvIDFS~p~~~~~~l~~~~~~   64 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN--------GVEEL---------DSPDVVIDFSSPEALPKTVDLCKKY   64 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT--------EEEEC---------SCCSEEEECSCGGGHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC--------cHHHh---------ccCCEEEEecCHHHHHHHHHHHHhc
Confidence            589999999999999999999999877542 21        11111         1345778888888888887776655


Q ss_pred             cCCccEEEeccCC
Q psy16220         90 FGRIDIVINNAGI  102 (223)
Q Consensus        90 ~~~id~li~~ag~  102 (223)
                        ++.+|+-+.|+
T Consensus        65 --~~p~ViGTTG~   75 (128)
T d1vm6a3          65 --RAGLVLGTTAL   75 (128)
T ss_dssp             --TCEEEECCCSC
T ss_pred             --CCCEEEEcCCC
Confidence              56678877774

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=95.04  E-value=0.48  Score=35.74  Aligned_cols=147  Identities=13%  Similarity=0.112  Sum_probs=74.4

Q ss_pred             CCcEEEEEcC-CCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGA-GAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa-~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .|+++|=..+ +|+++.+    ++..|+ .|+.++.         +...++...+.++..+....-...-..+..+.++.
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~---------s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~  210 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDL---------AKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKY  210 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEES---------CTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecC---------CHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHH
Confidence            4778886666 4555533    445677 5888876         55556555555554443211000112334455666


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      ..++-.++|++|..+-.+...+-...+..          .....|.+.+++.++.+  |.++ ++|.+...         
T Consensus       211 ~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~----------~~~~~L~~~a~~ll~pg--G~l~-~~scs~~~---------  268 (317)
T d2b78a2         211 ARRHHLTYDIIIIDPPSFARNKKEVFSVS----------KDYHKLIRQGLEILSEN--GLII-ASTNAANM---------  268 (317)
T ss_dssp             HHHTTCCEEEEEECCCCC-----CCCCHH----------HHHHHHHHHHHHTEEEE--EEEE-EEECCTTS---------
T ss_pred             HHhhcCCCCEEEEcChhhccchhHHHHHH----------HHHHHHHHHHHHHcCCC--CEEE-EEeCCccC---------
Confidence            65665689999999765433221111111          12234566666666654  5555 44432211         


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEe
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIV  193 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~  193 (223)
                          ..+.|.+.++..+...+..+..+.
T Consensus       269 ----~~~~f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         269 ----TVSQFKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             ----CHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             ----CHHHHHHHHHHHHHHcCCeEEEec
Confidence                122344444444555666666553

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.97  E-value=0.027  Score=38.05  Aligned_cols=60  Identities=12%  Similarity=0.013  Sum_probs=37.8

Q ss_pred             CcEEEEE-cCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          9 GRVAIVT-GAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         9 ~~~~lIt-Ga~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      ++.++|. .+++.||.++|..|+++|++|.++.+...... .-.......+.+.+.+.+..+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~-~~~~~~~~~~~~~l~~~GV~i   99 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANY-MHFTLEYPNMMRRLHELHVEE   99 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTH-HHHTTCHHHHHHHHHHTTCEE
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcccc-ccchhHHHHHHHHHhhccceE
Confidence            3444544 56789999999999999999999987433211 112223334455555555444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.96  E-value=0.033  Score=37.49  Aligned_cols=75  Identities=17%  Similarity=0.165  Sum_probs=47.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-cccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-AVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      .++|.|. +.+|+.+++.|.++|..+++++.         +++......++....+.. +..|..|..    .+++.  .
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~---------d~~~~~~~~~~~~~~~~~vi~Gd~~d~~----~L~~a--~   68 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISN---------LPEDDIKQLEQRLGDNADVIPGDSNDSS----VLKKA--G   68 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEEC---------CCHHHHHHHHHHHCTTCEEEESCTTSHH----HHHHH--T
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEec---------cchhHHHHHHHhhcCCcEEEEccCcchH----HHHHh--c
Confidence            5777887 69999999999999999999865         444444444444443332 223443332    22222  2


Q ss_pred             cCCccEEEeccC
Q psy16220         90 FGRIDIVINNAG  101 (223)
Q Consensus        90 ~~~id~li~~ag  101 (223)
                      ..+.+.+|....
T Consensus        69 i~~a~~vi~~~~   80 (153)
T d1id1a_          69 IDRCRAILALSD   80 (153)
T ss_dssp             TTTCSEEEECSS
T ss_pred             cccCCEEEEccc
Confidence            346888887764

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.066  Score=40.19  Aligned_cols=25  Identities=16%  Similarity=0.044  Sum_probs=22.0

Q ss_pred             CchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         19 AGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        19 ~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      |..|.++|+.++.+|+.|+++.+..
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecCC
Confidence            4689999999999999999997653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.83  E-value=0.057  Score=35.08  Aligned_cols=59  Identities=10%  Similarity=0.089  Sum_probs=42.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA   69 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (223)
                      -+.++|.||+ -||..+|..|.+.|.+|.++.+.+.-.+ ..+..-.+.+.+.+++.+..+
T Consensus        26 p~~vvIiGgG-~IG~E~A~~~~~~G~~Vtive~~~~il~-~~d~~~~~~l~~~l~~~gv~~   84 (125)
T d1ojta2          26 PGKLLIIGGG-IIGLEMGTVYSTLGSRLDVVEMMDGLMQ-GADRDLVKVWQKQNEYRFDNI   84 (125)
T ss_dssp             CSEEEEESCS-HHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHGGGEEEE
T ss_pred             CCeEEEECCC-HHHHHHHHHhhcCCCEEEEEEeeccccc-cchhhHHHHHHHHHHHcCccc
Confidence            4678888875 9999999999999999999987554332 234444555666666655433

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.79  E-value=0.022  Score=39.80  Aligned_cols=38  Identities=26%  Similarity=0.284  Sum_probs=33.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      .+.||++.|.|.+ .||+.+++.+...|++|...++...
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEeccc-cccccceeeeecccccccccccccc
Confidence            3789999999987 4999999999999999999988544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.70  E-value=0.041  Score=38.95  Aligned_cols=39  Identities=23%  Similarity=0.246  Sum_probs=33.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      ..+.||++.|.|.+ .||+.+|+.+..-|++|+..++...
T Consensus        41 ~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGTG-HIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeecc-cccccccccccccceeeeccCCccc
Confidence            35778999988865 8999999999999999999987544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.68  E-value=0.038  Score=38.35  Aligned_cols=30  Identities=20%  Similarity=0.417  Sum_probs=26.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r   31 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGT   31 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEe
Confidence            5777877 58999999999999999999876

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.027  Score=38.53  Aligned_cols=37  Identities=35%  Similarity=0.640  Sum_probs=32.8

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.+.||+++|.|-. -||+.+|+.+...|++|+++++
T Consensus        19 ~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~   55 (163)
T d1li4a1          19 DVMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEI   55 (163)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             CceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeec
Confidence            456789999998865 8999999999999999999965

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.48  E-value=0.22  Score=33.61  Aligned_cols=30  Identities=23%  Similarity=0.146  Sum_probs=25.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++-++ |.|-+|.++|+.|+++|++|.+.+|
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~   32 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDL   32 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEEC
Confidence            45555 5579999999999999999999987

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.04  E-value=0.088  Score=36.53  Aligned_cols=90  Identities=22%  Similarity=0.284  Sum_probs=51.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc-cccCCccc-----------
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV-PNYNSVVD-----------   78 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------   78 (223)
                      .++|.|+. -.|+..++-....|++|.++|.         +...+++    +++.+.... .+..+..+           
T Consensus        31 ~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~---------~~~~~~~----l~~l~~~~i~~~~~~~~~~~~~~gyA~~~   96 (183)
T d1l7da1          31 RVLVFGVG-VAGLQAIATAKRLGAVVMATDV---------RAATKEQ----VESLGGKFITVDDEAMKTAETAGGYAKEM   96 (183)
T ss_dssp             EEEEECCS-HHHHHHHHHHHHTTCEEEEECS---------CSTTHHH----HHHTTCEECCC------------------
T ss_pred             EEEEEcCc-HHHHHHHHHHHHcCCEEEEEec---------cHHHHHH----HHHhhcceEEEeccccccccccccchhhc
Confidence            78888875 7888888888899999999987         3333333    333322211 11111111           


Q ss_pred             ----hHHHHHHHHHhcCCccEEEeccCCCCCCCCCCCCHH
Q psy16220         79 ----GDKIVQTALENFGRIDIVINNAGILRDKSFARISDT  114 (223)
Q Consensus        79 ----~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~  114 (223)
                          .++.-+.+.+...+-|++|.++-+.......-++.+
T Consensus        97 s~~~~~~~~~~l~~~l~~aDlVI~talipG~~aP~lit~~  136 (183)
T d1l7da1          97 GEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEE  136 (183)
T ss_dssp             -----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHH
T ss_pred             CHHHHHHHHHHHHHHHHhhhhheeeeecCCcccceeehHH
Confidence                112233444556789999999976654433334444

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.04  E-value=0.05  Score=37.50  Aligned_cols=40  Identities=23%  Similarity=0.247  Sum_probs=30.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHH
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAE   61 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~   61 (223)
                      +-|+ |.|-+|.++|+.|+++|++|.+.+|         ++++.+.+.++
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr---------~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNR---------TYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECS---------SHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEEC---------CHHHHHHHHHc
Confidence            4444 5679999999999999999999987         66665554443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.042  Score=43.69  Aligned_cols=37  Identities=32%  Similarity=0.362  Sum_probs=31.4

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCC
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQ   44 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~   44 (223)
                      +++.+|||+|+ ||||..+++.|+..|. ++.++|.+.-
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~V   72 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTI   72 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence            45678999999 5799999999999998 7889887654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.02  E-value=0.27  Score=32.24  Aligned_cols=76  Identities=14%  Similarity=0.178  Sum_probs=52.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEE-ccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAER-GASVVVN-DLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~-G~~vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      ++.|.|++|..|+++++.+.+. ++.++.. ++         .+ .    ...+......+..|++..+.....++...+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~---------~~-~----~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~   66 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA---------GD-P----LSLLTDGNTEVVIDFTHPDVVMGNLEFLID   66 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT---------TC-C----THHHHTTTCSEEEECCCTTTHHHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec---------CC-c----hhhhccccCCEEEEcccHHHHHHHHHHHHh
Confidence            4789999999999999987754 6665543 22         10 1    112233456788899999888887777665


Q ss_pred             hcCCccEEEeccCC
Q psy16220         89 NFGRIDIVINNAGI  102 (223)
Q Consensus        89 ~~~~id~li~~ag~  102 (223)
                      .  ++..|+-+.|+
T Consensus        67 ~--~~~~ViGTTG~   78 (135)
T d1yl7a1          67 N--GIHAVVGTTGF   78 (135)
T ss_dssp             T--TCEEEECCCCC
T ss_pred             c--CCCEEEecccc
Confidence            4  57778877774

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.93  E-value=0.26  Score=31.10  Aligned_cols=38  Identities=21%  Similarity=0.277  Sum_probs=31.6

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      .+.....++.|.| +|-+|+-++....+.|+++++.+.+
T Consensus         6 ~~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~   43 (111)
T d1kjqa2           6 ALRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRY   43 (111)
T ss_dssp             TTSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            3445667899999 5699999999999999999999863

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.92  E-value=0.63  Score=32.42  Aligned_cols=145  Identities=14%  Similarity=0.036  Sum_probs=83.0

Q ss_pred             CCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGA--GAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa--~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .+.++++...  ...+..+++..|...|..++.+...         ..                       .+...+. .
T Consensus        24 ~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~~-----------------------~~~~~l~-~   70 (209)
T d2fr1a2          24 DGTWLVAKYAGTADETSTAAREALESAGARVRELVVD---------AR-----------------------CGRDELA-E   70 (209)
T ss_dssp             CSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECC---------TT-----------------------CCHHHHH-H
T ss_pred             CCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCC---------Cc-----------------------cCHHHHH-H
Confidence            4554444433  2347777888888899988876321         00                       1112222 2


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEecCcccccCCCCchhh
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTASNSGLLGNFGQANYS  165 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~y~  165 (223)
                      .....+.++.+||..+......... .  ..    .......+.+.+.+.   ......++.+++..+... ..+...-+
T Consensus        71 ~~~~~~~~~~vv~l~~~~~~~~~~~-~--~~----~~~~~~~l~l~qal~---~~~~~~~l~~vT~~a~~~-~~~d~~~~  139 (209)
T d2fr1a2          71 RLRSVGEVAGVLSLLAVDEAEPEEA-P--LA----LASLADTLSLVQAMV---SAELGCPLWTVTESAVAT-GPFERVRN  139 (209)
T ss_dssp             HHTTSCCCSEEEECTTTTCCCCSSC-G--GG----CHHHHHHHHHHHHHH---HTTCCCCEEEEEESCSCS-STTSCCSC
T ss_pred             HhhccCCCCeEEEeCCCCCCCCcch-h--HH----HHHHHHHHHHHHHHH---hCCCCCcEEEEEcCCccc-CCCcccCC
Confidence            3345578999999876543221111 1  00    112344555666553   223346777777644322 22334446


Q ss_pred             hhHHHHHHHHHHHHhhhCCCCeEEEEEeCCC
Q psy16220        166 AAKMALVGLSNTLSIEGEKNNIHCNVIVPTA  196 (223)
Q Consensus       166 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~  196 (223)
                      ...+++.+|+|+++.|+....+++..+-+..
T Consensus       140 p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~~~  170 (209)
T d2fr1a2         140 AAHGALWGVGRVIALENPAVWGGLVDVPAGS  170 (209)
T ss_dssp             GGGHHHHHHHHHHHHHCGGGEEEEEEECTTC
T ss_pred             HhHHhHHHHHHHHHHhCCCceEEEEECCCCC
Confidence            7899999999999999877667777775554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.80  E-value=0.038  Score=39.93  Aligned_cols=33  Identities=36%  Similarity=0.450  Sum_probs=28.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      |+|+|+||+ -.|.++|..|+++|++|++++|..
T Consensus         7 ~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGSG-VIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            568888875 889999999999999999998854

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.74  E-value=0.048  Score=38.40  Aligned_cols=37  Identities=24%  Similarity=0.281  Sum_probs=32.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+..++.
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~   81 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPY   81 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTT
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCc
Confidence            3578999999965 599999999999999999998764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.73  E-value=0.028  Score=39.78  Aligned_cols=35  Identities=26%  Similarity=0.502  Sum_probs=31.5

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.||++.|.|-+ .||+.+|+.+..-|++|+..++
T Consensus        40 el~gk~vgIiG~G-~IG~~va~~l~~fg~~V~~~d~   74 (197)
T d1j4aa1          40 EVRDQVVGVVGTG-HIGQVFMQIMEGFGAKVITYDI   74 (197)
T ss_dssp             CGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             cccCCeEEEeccc-ccchhHHHhHhhhcccccccCc
Confidence            5789999999865 9999999999999999999876

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.70  E-value=0.12  Score=32.95  Aligned_cols=61  Identities=11%  Similarity=0.150  Sum_probs=40.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc---CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAER---GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVP   71 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~---G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (223)
                      .+.++|.|| |.+|..+|..|.+.   |.+|.++.+.+...+ .-+..-.+.+.+.+++.+..+..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL~-~~d~~~~~~l~~~l~~~GV~v~~   83 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMILR-GFDHTLREELTKQLTANGIQILT   83 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhhc-ccchHHHHHHHHHHHhcCcEEEc
Confidence            468888888 79999999776654   567999987554432 22344455566667766655543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.69  E-value=0.078  Score=35.53  Aligned_cols=40  Identities=10%  Similarity=0.167  Sum_probs=30.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEccCCCCCCCCCChhhhhHHHH
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERG-ASVVVNDLGGQRDGDGKSSKAADTVVA   60 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~   60 (223)
                      ++.++|+ |-+|.++++.|++.| +++.+.+|         +.++.+.+.+
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r---------~~~~~~~l~~   42 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANR---------GAEKRERLEK   42 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECS---------SHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeC---------ChhHHHHhhh
Confidence            4667766 899999999999887 88999877         6655555443

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=93.64  E-value=0.029  Score=39.75  Aligned_cols=32  Identities=16%  Similarity=0.176  Sum_probs=27.8

Q ss_pred             cEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGRS-----YALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~a-----~a~~l~~~G~~vv~~~r   41 (223)
                      |+++|||.++|.|+.     +|..|+++|++|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999999999986     67788899999999863

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.58  E-value=1  Score=33.76  Aligned_cols=85  Identities=18%  Similarity=0.033  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCC-chHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGA-GLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~-giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ++++||=..+.+ +++.    .++..|++|+.++.         +...++...+.+...+......-.-..|+.+.++..
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~---------s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~  198 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDA---------SKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQRE  198 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECS---------CHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeC---------hHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHH
Confidence            466777666644 4443    34567999998875         666666666655544332111011123445666666


Q ss_pred             HHhcCCccEEEeccCCCCC
Q psy16220         87 LENFGRIDIVINNAGILRD  105 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~~~  105 (223)
                      .+.-.++|+||.+.-.+..
T Consensus       199 ~~~~~~fD~IilDPP~f~~  217 (309)
T d2igta1         199 ERRGSTYDIILTDPPKFGR  217 (309)
T ss_dssp             HHHTCCBSEEEECCCSEEE
T ss_pred             hhcCCCCCEEEECCCcccc
Confidence            6665789999999765543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.51  E-value=0.11  Score=36.25  Aligned_cols=40  Identities=18%  Similarity=0.243  Sum_probs=33.4

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQR   45 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~   45 (223)
                      ..+.++++.|.| .|.||+.+|+.+...|++|+..++....
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKL   79 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccccc
Confidence            357889999885 5699999999999999999999875443

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.46  E-value=0.037  Score=38.43  Aligned_cols=36  Identities=25%  Similarity=0.191  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEccCCC
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGAS-VVVNDLGGQ   44 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~-vv~~~r~~~   44 (223)
                      .+|+|+|+||+ -.|...|..|+++|++ |.++.+...
T Consensus         3 ~~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAG-PASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            36788989876 8999999999999995 889887654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.46  E-value=0.017  Score=40.53  Aligned_cols=35  Identities=31%  Similarity=0.289  Sum_probs=30.8

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+|++.|.| .|.||+.+++.+...|++|+..++
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~   75 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDP   75 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECT
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecC
Confidence            46788988888 579999999999999999999876

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.44  E-value=0.043  Score=40.43  Aligned_cols=34  Identities=32%  Similarity=0.353  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      +|+|+|+||+ -=|.+.|..|+++|++|+++.+..
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5788888875 678889999999999999997643

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.25  E-value=0.25  Score=32.27  Aligned_cols=61  Identities=18%  Similarity=0.160  Sum_probs=39.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH----HcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLA----ERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~----~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      .++++|.|| |.+|..+|..|+    +.|.+|.++.+........-++.-.+.+.+.+++.+..+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l~~~~~~~~~~~~~~~l~~~GV~~~  101 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVM  101 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccCCcccCCHHHHHHHHHHHHhCCcEEE
Confidence            567888876 689988888885    3599999998755443222233333445566776665554

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.24  E-value=0.42  Score=36.09  Aligned_cols=116  Identities=18%  Similarity=0.084  Sum_probs=65.9

Q ss_pred             cCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-cccccCCccchHHHHH
Q psy16220          7 FDGRVAIVTGAG-AGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-AVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         7 ~~~~~~lItGa~-~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   84 (223)
                      .+|++||=.++. |+++.+    ++..+.+|+.++.         +...++...+.+...+.. +.+.   ..+..+..+
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~---------s~~al~~a~~n~~~ngl~~~~~i---~~d~~~~~~  207 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDS---------SAEALRRAEENARLNGLGNVRVL---EANAFDLLR  207 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEES---------CHHHHHHHHHHHHHTTCTTEEEE---ESCHHHHHH
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecc---------hHHHHHHHHHHHHHcCCCCccee---eccHHHHhh
Confidence            468888888775 444433    3455778999987         777777776666655432 1111   223344555


Q ss_pred             HHHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEe
Q psy16220         85 TALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTA  150 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vs  150 (223)
                      .+.+.-.++|.||.++........   .......       ....+.+.+...++.+  |.+++.|
T Consensus       208 ~~~~~~~~fD~Vi~DpP~~~~~~~---~~~~~~~-------~~~~l~~~a~~lLkpG--G~Lv~~s  261 (318)
T d1wxxa2         208 RLEKEGERFDLVVLDPPAFAKGKK---DVERAYR-------AYKEVNLRAIKLLKEG--GILATAS  261 (318)
T ss_dssp             HHHHTTCCEEEEEECCCCSCCSTT---SHHHHHH-------HHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred             hhHhhhcCCCEEEEcCCccccchH---HHHHHHH-------HHHHHHHHHHHHcCCC--CEEEEEe
Confidence            555555689999999865443221   1111111       1224555666666654  6666544

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.21  E-value=0.45  Score=34.66  Aligned_cols=74  Identities=20%  Similarity=0.279  Sum_probs=48.2

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ..|+++|=.|+++|+-   +..+++.|++|+.+|.         ++...+...+..+..+....+...|.   ..    .
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDi---------s~~av~~A~~na~~n~~~~~~~~~d~---~~----~  179 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDI---------DPMVLPQAEANAKRNGVRPRFLEGSL---EA----A  179 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEES---------CGGGHHHHHHHHHHTTCCCEEEESCH---HH----H
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCEEEEEEC---------ChHHHHHHHHHHHHcCCceeEEeccc---cc----c
Confidence            4688999999998863   3356678999999987         66666666666665554433322221   11    1


Q ss_pred             HHhcCCccEEEecc
Q psy16220         87 LENFGRIDIVINNA  100 (223)
Q Consensus        87 ~~~~~~id~li~~a  100 (223)
                       -..+++|.++.|.
T Consensus       180 -~~~~~fD~V~ani  192 (254)
T d2nxca1         180 -LPFGPFDLLVANL  192 (254)
T ss_dssp             -GGGCCEEEEEEEC
T ss_pred             -ccccccchhhhcc
Confidence             1236899999873

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.11  E-value=0.21  Score=33.48  Aligned_cols=47  Identities=17%  Similarity=0.128  Sum_probs=34.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEIR   63 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~   63 (223)
                      |++.|.|+||.||.....-+.+.  .++|+.+.-       .++-+.+.+...+++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa-------~~N~~~L~~q~~~f~   50 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-------GKNVTRMVEQCLEFS   50 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-------SSCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe-------cCcHHHHHHHHHHHh
Confidence            57999999999999999888776  467776642       345556655555553

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.09  E-value=0.25  Score=34.65  Aligned_cols=76  Identities=26%  Similarity=0.338  Sum_probs=47.9

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      +++|+++|=.|++.|.   ++..++..|+ +|+.++.         +....+...+.+...+....+...|...      
T Consensus        44 dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi---------~~~~~~~a~~N~~~~~~~~~~~~~d~~~------  105 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEV---------DKEAVDVLIENLGEFKGKFKVFIGDVSE------  105 (201)
T ss_dssp             SSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEES---------CHHHHHHHHHHTGGGTTSEEEEESCGGG------
T ss_pred             CCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcC---------cHHHHHHHHHHHHHcCCCceEEECchhh------
Confidence            4689999999997662   2333456775 7888876         6666665555555444433333333221      


Q ss_pred             HHHHhcCCccEEEeccCCC
Q psy16220         85 TALENFGRIDIVINNAGIL  103 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~~  103 (223)
                          -.+++|.+|.|+-+.
T Consensus       106 ----~~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         106 ----FNSRVDIVIMNPPFG  120 (201)
T ss_dssp             ----CCCCCSEEEECCCCS
T ss_pred             ----hCCcCcEEEEcCccc
Confidence                135899999998753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.08  E-value=0.093  Score=36.97  Aligned_cols=30  Identities=23%  Similarity=0.169  Sum_probs=26.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.|. |.|.+|..+|..|+++|++|+.+|.
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~   31 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDV   31 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeC
Confidence            45666 6779999999999999999999976

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.04  E-value=0.28  Score=29.99  Aligned_cols=71  Identities=18%  Similarity=0.260  Sum_probs=43.0

Q ss_pred             CcEEEEEcCCCchH-HHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLG-RSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         9 ~~~~lItGa~~giG-~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      .|.+.+.|-. |+| .++|+.|.++|+.|...|+.         .   ....+.+.+.+..+.... +..          
T Consensus         8 ~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~---------~---~~~~~~L~~~Gi~v~~g~-~~~----------   63 (96)
T d1p3da1           8 VQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIA---------D---GVVTQRLAQAGAKIYIGH-AEE----------   63 (96)
T ss_dssp             CCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESC---------C---SHHHHHHHHTTCEEEESC-CGG----------
T ss_pred             CCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCC---------C---ChhhhHHHHCCCeEEECC-ccc----------
Confidence            4567767665 555 55799999999999998762         1   122234445554432211 111          


Q ss_pred             HhcCCccEEEeccCCCC
Q psy16220         88 ENFGRIDIVINNAGILR  104 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~  104 (223)
                       .....|.+|...++..
T Consensus        64 -~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1          64 -HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             -GGTTCSEEEECTTSCT
T ss_pred             -cCCCCCEEEECCCcCC
Confidence             1235799999988643

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.01  E-value=0.62  Score=35.14  Aligned_cols=117  Identities=21%  Similarity=0.182  Sum_probs=66.4

Q ss_pred             CCcEEEEEcCC-CchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAG-AGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~-~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      .|++||=.++. |+++.++    +..|+ +|+.++.         +...++...+.+...+....... -..+....+..
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~---------s~~al~~a~~N~~~ngl~~~~~~-~~~d~~~~~~~  210 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDK---------SPRAIETAKENAKLNGVEDRMKF-IVGSAFEEMEK  210 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEES---------CHHHHHHHHHHHHHTTCGGGEEE-EESCHHHHHHH
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecC---------CHHHHHHHHHHHHHcCCCcccee-eechhhhhhHH
Confidence            37788877774 5555443    45676 6888876         77777776666666554322221 12334445555


Q ss_pred             HHHhcCCccEEEeccCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCcEEEEe
Q psy16220         86 ALENFGRIDIVINNAGILRDKSFARISDTDWQLVQDVHLTGAFRVSRAAWPHMKKQNYGRLVMTA  150 (223)
Q Consensus        86 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~vs  150 (223)
                      ..+.-.++|.+|.++.......      .+....    ......+.+.+.+.++.+  |.+++.|
T Consensus       211 ~~~~~~~fD~Vi~DpP~~~~~~------~~~~~~----~~~y~~l~~~a~~ll~pG--G~lv~~s  263 (324)
T d2as0a2         211 LQKKGEKFDIVVLDPPAFVQHE------KDLKAG----LRAYFNVNFAGLNLVKDG--GILVTCS  263 (324)
T ss_dssp             HHHTTCCEEEEEECCCCSCSSG------GGHHHH----HHHHHHHHHHHHTTEEEE--EEEEEEE
T ss_pred             HHhccCCCCchhcCCccccCCH------HHHHHH----HHHHHHHHHHHHHHcCCC--cEEEEEe
Confidence            5555568999999987544321      111111    112334556666666555  6666665

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.00  E-value=0.084  Score=35.43  Aligned_cols=29  Identities=3%  Similarity=0.000  Sum_probs=24.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +.++ |.|-+|.++++.|.+.|+++++.+|
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r   31 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGS   31 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECS
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcC
Confidence            4555 5679999999999999999999876

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.63  E-value=0.076  Score=37.15  Aligned_cols=30  Identities=30%  Similarity=0.549  Sum_probs=26.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.|.|++ ..|.++|..|++.|++|.+.+|
T Consensus         9 KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r   38 (189)
T d1n1ea2           9 KAVVFGSG-AFGTALAMVLSKKCREVCVWHM   38 (189)
T ss_dssp             EEEEECCS-HHHHHHHHHHHTTEEEEEEECS
T ss_pred             eEEEECCC-HHHHHHHHHHHHcCCeEEEEEe
Confidence            57788876 6999999999999999999977

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.43  E-value=0.18  Score=36.32  Aligned_cols=36  Identities=25%  Similarity=0.420  Sum_probs=31.3

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++||+++|-|- |-+|..+|+.|.+.|+++++.+.
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~   70 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDV   70 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecc
Confidence            3588999997765 58999999999999999999875

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.17  E-value=0.065  Score=39.24  Aligned_cols=32  Identities=28%  Similarity=0.432  Sum_probs=27.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      -|+|+||+ -.|.++|.+|+++|.+|+++++..
T Consensus         6 DvvIIGaG-i~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGG-IIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECCS-HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCcEEEEeCCC
Confidence            37777764 899999999999999999998753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.94  E-value=0.13  Score=37.17  Aligned_cols=35  Identities=29%  Similarity=0.282  Sum_probs=29.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      .++|+|+||+ --|..+|..|+++|++|+++.+.+.
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4578888876 7788889999999999999987543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.85  E-value=0.59  Score=32.57  Aligned_cols=74  Identities=18%  Similarity=0.106  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALE   88 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (223)
                      +.+||=.|++.|.   ++..|++.|++|+.+|.         +..-++...+.+...+..+.....|..+..       .
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~---------S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-------~   98 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDI---------SEDMIRKAREYAKSRESNVEFIVGDARKLS-------F   98 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCCEEEECCTTSCC-------S
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccc---------cccchhhhhhhhcccccccccccccccccc-------c
Confidence            4578999998877   56778889999999986         666666655555554443333222322211       1


Q ss_pred             hcCCccEEEeccC
Q psy16220         89 NFGRIDIVINNAG  101 (223)
Q Consensus        89 ~~~~id~li~~ag  101 (223)
                      ..+.+|++++...
T Consensus        99 ~~~~fD~I~~~~~  111 (226)
T d1ve3a1          99 EDKTFDYVIFIDS  111 (226)
T ss_dssp             CTTCEEEEEEESC
T ss_pred             cCcCceEEEEecc
Confidence            1247999888754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.66  E-value=0.13  Score=36.82  Aligned_cols=37  Identities=27%  Similarity=0.377  Sum_probs=31.5

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      -++|.++|+||+ .-|...|..|+++|++|+++.+...
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            357899999986 6799999999999999999987543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.65  E-value=0.35  Score=31.26  Aligned_cols=39  Identities=28%  Similarity=0.416  Sum_probs=28.2

Q ss_pred             CCCccccCCcEEEEEcCCC-ch---------HHHHHHHHHHcCCeEEEEcc
Q psy16220          1 MPEQVRFDGRVAIVTGAGA-GL---------GRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         1 m~~~~~~~~~~~lItGa~~-gi---------G~a~a~~l~~~G~~vv~~~r   41 (223)
                      ||.+  -..|++||.|++. .|         +...++.|.+.|++++++.-
T Consensus         1 mp~~--~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~   49 (127)
T d1a9xa3           1 MPKR--TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNS   49 (127)
T ss_dssp             CCCC--SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCCC--CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecC
Confidence            7743  2346899999852 33         45678888899999999854

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.61  E-value=1  Score=30.35  Aligned_cols=79  Identities=16%  Similarity=0.077  Sum_probs=47.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +|+.+|=.|+++|.   ++.+++.+|++++.++.         +....+...+.++..+........   +.+.......
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~---------~~~a~~~~~~N~~~~~~~~~v~~~---~~d~~~~~~~  105 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEK---------DPEAVRLLKENVRRTGLGARVVAL---PVEVFLPEAK  105 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECC---------CHHHHHHHHHHHHHHTCCCEEECS---CHHHHHHHHH
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhccc---------CHHHHhhhhHHHHhhccccceeee---ehhccccccc
Confidence            46677766665542   33456678999998865         777776666666655443332222   2223333334


Q ss_pred             HhcCCccEEEeccC
Q psy16220         88 ENFGRIDIVINNAG  101 (223)
Q Consensus        88 ~~~~~id~li~~ag  101 (223)
                      ....++|+++.++-
T Consensus       106 ~~~~~fD~If~DPP  119 (171)
T d1ws6a1         106 AQGERFTVAFMAPP  119 (171)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             ccCCccceeEEccc
Confidence            44468999998864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.60  E-value=0.65  Score=27.88  Aligned_cols=69  Identities=20%  Similarity=0.203  Sum_probs=44.4

Q ss_pred             EEEEEcCCCchHH-HHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHh
Q psy16220         11 VAIVTGAGAGLGR-SYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALEN   89 (223)
Q Consensus        11 ~~lItGa~~giG~-a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (223)
                      ++-++| -+|+|- ++|+.|.++|+.|...|+.         .   ....+.+++.+..+... -+.+.           
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~---------~---~~~t~~L~~~Gi~i~~g-h~~~~-----------   57 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIE---------E---TERTAYLRKLGIPIFVP-HSADN-----------   57 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSS---------C---CHHHHHHHHTTCCEESS-CCTTS-----------
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCC---------C---ChhHHHHHHCCCeEEee-ecccc-----------
Confidence            455554 457777 5899999999999998762         1   12334577777555432 12221           


Q ss_pred             cCCccEEEeccCCCC
Q psy16220         90 FGRIDIVINNAGILR  104 (223)
Q Consensus        90 ~~~id~li~~ag~~~  104 (223)
                      ....|.+|+..++..
T Consensus        58 i~~~d~vV~SsAI~~   72 (89)
T d1j6ua1          58 WYDPDLVIKTPAVRD   72 (89)
T ss_dssp             CCCCSEEEECTTCCT
T ss_pred             cCCCCEEEEecCcCC
Confidence            246899999998743

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.57  E-value=0.11  Score=39.27  Aligned_cols=35  Identities=29%  Similarity=0.372  Sum_probs=29.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      ++|.++|+||+ --|..+|..|+++|++|+++..+.
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            46889988876 678889999999999999997643

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.52  E-value=0.11  Score=42.52  Aligned_cols=37  Identities=16%  Similarity=0.117  Sum_probs=30.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      .+++.+|+|.|+ ||+|..+++-|+..|. +++++|...
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            356678999987 6999999999999996 688886543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.47  E-value=0.52  Score=33.90  Aligned_cols=35  Identities=26%  Similarity=0.330  Sum_probs=29.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAE-RGASVVVND   40 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~-~G~~vv~~~   40 (223)
                      .++++++++|-| .|-+|..+|++|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            467899988775 78999999999975 599988765

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.46  E-value=0.14  Score=34.45  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=28.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEccCC
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGA--SVVVNDLGG   43 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~--~vv~~~r~~   43 (223)
                      .||+++|+||+ ..|..+|..|.+.|.  +|+++++.+
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999987 779999999999874  788886643

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.40  E-value=0.88  Score=32.36  Aligned_cols=73  Identities=23%  Similarity=0.139  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTAL   87 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (223)
                      +++++|=.|++.|   .++..|+++|++|+.++.         ++.-++...+.+...+..+.+...|..+..       
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~---------s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-------  101 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDL---------HEEMLRVARRKAKERNLKIEFLQGDVLEIA-------  101 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTCCCEEEESCGGGCC-------
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEee---------ccccccccccccccccccchheehhhhhcc-------
Confidence            4568999999887   346678889999999986         666666666666665555555444444332       


Q ss_pred             HhcCCccEEEecc
Q psy16220         88 ENFGRIDIVINNA  100 (223)
Q Consensus        88 ~~~~~id~li~~a  100 (223)
                       --+.+|.+++.-
T Consensus       102 -~~~~fD~I~~~~  113 (251)
T d1wzna1         102 -FKNEFDAVTMFF  113 (251)
T ss_dssp             -CCSCEEEEEECS
T ss_pred             -cccccchHhhhh
Confidence             014689888753

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=91.39  E-value=0.12  Score=35.60  Aligned_cols=44  Identities=25%  Similarity=0.252  Sum_probs=34.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIR   63 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~   63 (223)
                      .|++||..|++.|   ..+..|+++|++|+.+|.         ++.-++...+..+
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~---------S~~~i~~a~~~~~   63 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAEL---------SEAAVERYFTERG   63 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEE---------CHHHHHHHHHHHC
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecc---------cHHHHHHHHHHhc
Confidence            4789999999887   367799999999999987         6666665554443

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=91.29  E-value=0.8  Score=28.80  Aligned_cols=81  Identities=10%  Similarity=0.117  Sum_probs=51.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc-ccccCCcc-chHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA-VPNYNSVV-DGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~   86 (223)
                      ||++||+--..-+-..+...|-+.|++|+..+.         +...   ..+.+++....+ ..|..-.. +--.+++++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~---------~~~~---al~~~~~~~~dliilD~~mp~~~G~e~~~~i   68 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEAT---------NGRE---AVEKYKELKPDIVTMDITMPEMNGIDAIKEI   68 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEES---------SHHH---HHHHHHHHCCSEEEEECSCGGGCHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEEC---------CHHH---HHHHHHhccCCEEEEecCCCCCCHHHHHHHH
Confidence            789999999999999999999999999875422         3222   233334333333 33433222 234667777


Q ss_pred             HHhcCCccEEEeccC
Q psy16220         87 LENFGRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~~id~li~~ag  101 (223)
                      .+....+.+++..+-
T Consensus        69 r~~~~~~pvi~ls~~   83 (118)
T d1u0sy_          69 MKIDPNAKIIVCSAM   83 (118)
T ss_dssp             HHHCTTCCEEEEECT
T ss_pred             HHhCCCCcEEEEEcc
Confidence            777777777776643

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.22  E-value=0.16  Score=37.20  Aligned_cols=32  Identities=31%  Similarity=0.465  Sum_probs=27.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      ++|+||+ -.|.++|.+|+++|++|+++++...
T Consensus         6 vvIIGaG-i~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVGAG-SMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            6777664 8899999999999999999988543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.16  E-value=0.69  Score=33.00  Aligned_cols=75  Identities=15%  Similarity=0.075  Sum_probs=52.0

Q ss_pred             cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHH
Q psy16220          7 FDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         7 ~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (223)
                      ..++++|=.|++.|.   ++..|+++|.+|+.+|.         ++.-++...+.....+..+.+...|..+..      
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~---------S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------   97 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDL---------SQEMLSEAENKFRSQGLKPRLACQDISNLN------   97 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECS---------CHHHHHHHHHHHHHTTCCCEEECCCGGGCC------
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeecc---------chhhhhhccccccccCccceeeccchhhhc------
Confidence            456789999998885   67788899999999876         666666656666666655555555554332      


Q ss_pred             HHhcCCccEEEeccC
Q psy16220         87 LENFGRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~~id~li~~ag  101 (223)
                        ..+++|++++..+
T Consensus        98 --~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 --INRKFDLITCCLD  110 (246)
T ss_dssp             --CSCCEEEEEECTT
T ss_pred             --ccccccccceeee
Confidence              1247999887543

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.07  E-value=0.32  Score=35.19  Aligned_cols=34  Identities=24%  Similarity=0.409  Sum_probs=28.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAER-GASVVVND   40 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~-G~~vv~~~   40 (223)
                      +++||+++|-|- |-+|..+|+.|.+. |++|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            478999998887 56999999999864 89887764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.91  E-value=0.14  Score=38.10  Aligned_cols=35  Identities=31%  Similarity=0.411  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      +-|+|+|+||+ --|.+.|..|+++|++|+++.+..
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34689999886 669999999999999999997643

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.86  E-value=0.7  Score=28.94  Aligned_cols=60  Identities=20%  Similarity=0.278  Sum_probs=39.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHH---cCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAE---RGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV   70 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~---~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (223)
                      -+.++|+||+ .+|..+|..|.+   .|.+|.++.|.+...+ .-++.-...+.+.+++.+..+.
T Consensus        18 p~~v~IiGgG-~ig~E~A~~l~~~~~~g~~Vtli~~~~~il~-~~d~~~~~~~~~~l~~~GI~v~   80 (117)
T d1feca2          18 PKRALCVGGG-YISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVR   80 (117)
T ss_dssp             CSEEEEECSS-HHHHHHHHHHHHHSCTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTEEEE
T ss_pred             CCeEEEECCC-hHHHHHHHHhHhhcccccccceecccccccc-cccchhhHHHHHHHhhCcEEEE
Confidence            3688888875 899999987664   4889999987554332 2234444455556666655443

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.68  E-value=1.2  Score=29.73  Aligned_cols=32  Identities=22%  Similarity=0.219  Sum_probs=27.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVN   39 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~   39 (223)
                      +|+.+.|++.+||.|--++-.+.+.|-++.-.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l   33 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL   33 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC
Confidence            58889999999999999999999999666543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.59  E-value=0.22  Score=33.13  Aligned_cols=30  Identities=20%  Similarity=0.087  Sum_probs=25.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++-|+ |.|-+|.++|+.|+++|+.+++.++
T Consensus         2 kIgiI-G~G~mG~~ia~~l~~~g~~v~~~~~   31 (152)
T d1i36a2           2 RVGFI-GFGEVAQTLASRLRSRGVEVVTSLE   31 (152)
T ss_dssp             EEEEE-SCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred             EEEEE-cHHHHHHHHHHHHHHCCCeEEEEcC
Confidence            35556 4589999999999999999998866

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.27  E-value=1.7  Score=29.20  Aligned_cols=14  Identities=21%  Similarity=0.432  Sum_probs=11.4

Q ss_pred             cCCccEEEeccCCC
Q psy16220         90 FGRIDIVINNAGIL  103 (223)
Q Consensus        90 ~~~id~li~~ag~~  103 (223)
                      +..-|+||+++|..
T Consensus        75 l~~AD~Vvitag~~   88 (167)
T d1u8xx1          75 FTDVDFVMAHIRVG   88 (167)
T ss_dssp             HSSCSEEEECCCTT
T ss_pred             cCCCCEEEECCCcC
Confidence            35799999999863

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.10  E-value=0.17  Score=37.14  Aligned_cols=35  Identities=26%  Similarity=0.233  Sum_probs=31.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      .+++|++++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468899999988 68999999999999999988764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.04  E-value=0.14  Score=36.35  Aligned_cols=34  Identities=26%  Similarity=0.535  Sum_probs=29.1

Q ss_pred             CcEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEccC
Q psy16220          9 GRVAIVTGAGAGLGRS-----YALLLAERGASVVVNDLG   42 (223)
Q Consensus         9 ~~~~lItGa~~giG~a-----~a~~l~~~G~~vv~~~r~   42 (223)
                      +|++.|+|+-||.|+.     +|..|+++|.+|+++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999999986     567778899999999864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.89  E-value=0.18  Score=35.62  Aligned_cols=31  Identities=26%  Similarity=0.167  Sum_probs=26.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      |+|+|| |--|..+|..|+++|.+|+++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            777874 5778999999999999999997754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.56  E-value=0.21  Score=36.24  Aligned_cols=34  Identities=26%  Similarity=0.447  Sum_probs=30.2

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEc
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      +++|++++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            67899999886 77999999999999999998665

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.25  E-value=0.23  Score=36.43  Aligned_cols=37  Identities=22%  Similarity=0.268  Sum_probs=31.4

Q ss_pred             CCcEEEEEcCCCchHHHH-----HHHHHHcCCeEEEEccCCC
Q psy16220          8 DGRVAIVTGAGAGLGRSY-----ALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~-----a~~l~~~G~~vv~~~r~~~   44 (223)
                      .++.++|+.|=||.|+..     |..|+++|++|+++|-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            567888888899999985     7888999999999998754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.19  E-value=0.17  Score=37.46  Aligned_cols=32  Identities=34%  Similarity=0.447  Sum_probs=27.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      .|+|+||+ -+|.++|.+|+++|. +|++++++.
T Consensus         3 dViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGAG-IVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            47788876 899999999999997 699998754

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.04  E-value=0.19  Score=37.71  Aligned_cols=31  Identities=26%  Similarity=0.303  Sum_probs=22.4

Q ss_pred             cEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEcc
Q psy16220         10 RVAIVTGAGAGLGR-----SYALLLAERGASVVVNDL   41 (223)
Q Consensus        10 ~~~lItGa~~giG~-----a~a~~l~~~G~~vv~~~r   41 (223)
                      |++||++|++| |.     +++++|.++|+.|..++.
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            45666665444 54     688999999999988753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.03  E-value=0.17  Score=36.90  Aligned_cols=32  Identities=25%  Similarity=0.255  Sum_probs=27.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      .|+|+|| |--|.+.|..|+++|++|+++.+..
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5888888 5788999999999999999997643

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=88.60  E-value=1.6  Score=29.84  Aligned_cols=34  Identities=15%  Similarity=0.207  Sum_probs=19.1

Q ss_pred             HHHHHHhcCCccEEEeccCCCCCCCCCCCCHHHH
Q psy16220         83 VQTALENFGRIDIVINNAGILRDKSFARISDTDW  116 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~  116 (223)
                      +..+.....+.|++|...|..........+.+++
T Consensus        62 ~~~~~~~~~~~D~vvi~~G~ND~~~~~~~~~~~~   95 (208)
T d2o14a2          62 LEAILKYIKPGDYFMLQLGINDTNPKHKESEAEF   95 (208)
T ss_dssp             HHHHHTTCCTTCEEEEECCTGGGCGGGCCCHHHH
T ss_pred             HHHHHHhcCCCCEEEEEcCCCcccccccccHHHH
Confidence            3344455567899998888654332233344443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=88.49  E-value=0.33  Score=32.79  Aligned_cols=37  Identities=19%  Similarity=0.472  Sum_probs=32.0

Q ss_pred             ccccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          4 QVRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         4 ~~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++-+.||+++|.|= |-+|+.+|+.+...|++|+++.+
T Consensus        18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~   54 (163)
T d1v8ba1          18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEI   54 (163)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEec
Confidence            45578999998875 58999999999999999999854

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.35  E-value=0.97  Score=33.21  Aligned_cols=47  Identities=23%  Similarity=0.290  Sum_probs=33.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCC
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGG   67 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (223)
                      +++||=.|++.|.   ++..|+++|++|+.+|.         ++.-++...+.......
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~---------S~~ml~~A~~~~~~~~~  103 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDA---------SDKMLKYALKERWNRRK  103 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEES---------CHHHHHHHHHHHHHTTT
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccC---------chHHHHHHHHHHHhccc
Confidence            5689999998776   36667788999999986         66555555555444433

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=88.25  E-value=0.83  Score=31.83  Aligned_cols=71  Identities=28%  Similarity=0.270  Sum_probs=43.1

Q ss_pred             ccCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHH
Q psy16220          6 RFDGRVAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         6 ~~~~~~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (223)
                      ++.||+||=.|+++|+   ++..++..|+ +|+.++.         +....+...+    ....+.+...|..+.     
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDi---------d~~a~~~ar~----N~~~~~~~~~D~~~l-----  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDI---------DPDAIETAKR----NCGGVNFMVADVSEI-----  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEES---------CHHHHHHHHH----HCTTSEEEECCGGGC-----
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCccccccc---------CHHHHHHHHH----ccccccEEEEehhhc-----
Confidence            5789999999998873   2344666775 5888875         4444433222    222233333333221     


Q ss_pred             HHHHhcCCccEEEeccCC
Q psy16220         85 TALENFGRIDIVINNAGI  102 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~  102 (223)
                           -+++|++|.|.-+
T Consensus       105 -----~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -----SGKYDTWIMNPPF  117 (197)
T ss_dssp             -----CCCEEEEEECCCC
T ss_pred             -----CCcceEEEeCccc
Confidence                 2689999999865

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.08  E-value=0.46  Score=32.85  Aligned_cols=36  Identities=14%  Similarity=0.040  Sum_probs=31.5

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..++++++.|.|. |.||+++++.+...|.+|+..++
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~   75 (188)
T d2naca1          40 YDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDR   75 (188)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECS
T ss_pred             eeccccceeeccc-cccchhhhhhhhccCceEEEEee
Confidence            3578899998885 58999999999999999999976

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.90  E-value=2.6  Score=28.20  Aligned_cols=31  Identities=10%  Similarity=0.015  Sum_probs=21.1

Q ss_pred             EEEEEcC-CCchHHHHHHHHHHcC----CeEEEEcc
Q psy16220         11 VAIVTGA-GAGLGRSYALLLAERG----ASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa-~~giG~a~a~~l~~~G----~~vv~~~r   41 (223)
                      ++.|+|| +.|.+.+++..+....    -.+++.|+
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di   38 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDI   38 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECC
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcC
Confidence            5667776 5677777777666432    47899886

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.85  E-value=0.36  Score=35.94  Aligned_cols=36  Identities=22%  Similarity=0.205  Sum_probs=31.0

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+++||+++|-|- |-+|..+|+.|.+.|++|+.++-
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            3578999998876 69999999999999999987753

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=87.80  E-value=0.36  Score=33.56  Aligned_cols=36  Identities=17%  Similarity=0.200  Sum_probs=31.2

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..++||++.|.|.+ .||+.+|+.+...|++++..++
T Consensus        43 ~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~v~~~d~   78 (191)
T d1gdha1          43 EKLDNKTLGIYGFG-SIGQALAKRAQGFDMDIDYFDT   78 (191)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHTTTCEEEEECS
T ss_pred             ceecccceEEeecc-cchHHHHHHHHhhccccccccc
Confidence            35678999988765 9999999999999999999875

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.79  E-value=0.26  Score=36.18  Aligned_cols=31  Identities=26%  Similarity=0.306  Sum_probs=27.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      .|+|+||+ --|+.+|..|+++|.+|+++.+.
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~   34 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQ   34 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCC
Confidence            58888887 88999999999999999999774

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.77  E-value=0.38  Score=32.53  Aligned_cols=33  Identities=18%  Similarity=0.183  Sum_probs=25.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      +++.++|+||+ .+|..+|..|.+.|.++.++.+
T Consensus         2 ~~~~VvIIGgG-~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGTG-LAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECCc-HHHHHHHHHHHHcCCceEEEEe
Confidence            35678777765 9999999999999987655544

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=87.32  E-value=0.84  Score=30.31  Aligned_cols=46  Identities=20%  Similarity=0.227  Sum_probs=33.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEccCCCCCCCCCChhhhhHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER--GASVVVNDLGGQRDGDGKSSKAADTVVAEI   62 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~   62 (223)
                      |++.|.|+||.||......+.+.  .++|+.+.-       .++-..+.+...++
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa-------~~N~~~L~~q~~ef   50 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA-------NRNVKDLADAAKRT   50 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE-------SSCHHHHHHHHHHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe-------CCCHHHHHHHHHhh
Confidence            78999999999999998888765  577777643       33555555544444

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.29  E-value=0.2  Score=31.27  Aligned_cols=38  Identities=18%  Similarity=0.222  Sum_probs=30.7

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      ..++||+|+|.|++ -=|..+|..|++.+.++++..|..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            45889999999987 567788999998888877776643

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.21  E-value=0.27  Score=34.77  Aligned_cols=35  Identities=26%  Similarity=0.386  Sum_probs=29.1

Q ss_pred             cEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEccCCC
Q psy16220         10 RVAIVTGAGAGLGRS-----YALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus        10 ~~~lItGa~~giG~a-----~a~~l~~~G~~vv~~~r~~~   44 (223)
                      |++.|+++-||.|+.     +|..|+++|.+|+++|-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            689999999999986     56677888999999987543

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=87.03  E-value=2.3  Score=26.54  Aligned_cols=80  Identities=10%  Similarity=0.109  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc-ccccCCc-cchHHHHHHH
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA-VPNYNSV-VDGDKIVQTA   86 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~   86 (223)
                      ||++||+--...+-..+.+.|.+.|+.|....          +...   ..+.+.+....+ ..|..-. .+--.+++++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~----------~g~e---al~~~~~~~~dlillD~~mP~~~G~el~~~l   67 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAA----------NGLQ---ALDIVTKERPDLVLLDMKIPGMDGIEILKRM   67 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES----------SHHH---HHHHHHHHCCSEEEEESCCTTCCHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC----------CHHH---HHHHHHhCCCCEEEEeccCCCCCHHHHHHHH
Confidence            57899999999999999999999999988753          2222   233333333333 3333321 1233667777


Q ss_pred             HHhcCCccEEEeccC
Q psy16220         87 LENFGRIDIVINNAG  101 (223)
Q Consensus        87 ~~~~~~id~li~~ag  101 (223)
                      .+....+.+++.++-
T Consensus        68 r~~~~~~pvi~lt~~   82 (119)
T d1peya_          68 KVIDENIRVIIMTAY   82 (119)
T ss_dssp             HHHCTTCEEEEEESS
T ss_pred             HHhCCCCcEEEEecC
Confidence            776666777776653

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.73  E-value=0.82  Score=31.23  Aligned_cols=29  Identities=21%  Similarity=0.124  Sum_probs=24.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEE
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-SVVVN   39 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~vv~~   39 (223)
                      +|.|.||||-.|+.+.+.|.++.. ++..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l   32 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYL   32 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEe
Confidence            689999999999999999998754 55444

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.40  E-value=0.68  Score=32.13  Aligned_cols=80  Identities=14%  Similarity=0.167  Sum_probs=52.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHHHHHhc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQTALENF   90 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (223)
                      ++=+|-|+||...++.+.+ . +++|+.+|+         ++..++...+.+......+.+...+..+....++..  ..
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~---------d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~--~~   93 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDV---------DSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTL--GI   93 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEES---------CHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHT--TC
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeec---------hHHHHHHHHHhhccccccccchhHHHhhHHHHHHHc--CC
Confidence            3335677778878877766 2 578999988         777776666666554444555555555554443332  13


Q ss_pred             CCccEEEeccCCC
Q psy16220         91 GRIDIVINNAGIL  103 (223)
Q Consensus        91 ~~id~li~~ag~~  103 (223)
                      +++|+++...|++
T Consensus        94 ~~vdgIl~DlGvS  106 (192)
T d1m6ya2          94 EKVDGILMDLGVS  106 (192)
T ss_dssp             SCEEEEEEECSCC
T ss_pred             CCcceeeeccchh
Confidence            6899999999874

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.31  E-value=1.7  Score=30.36  Aligned_cols=79  Identities=16%  Similarity=0.228  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccc-cccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAV-PNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   86 (223)
                      .|.+||-+|+++|--.++..++.....+|+.+++         ++...+...+.+...+.... ....|..+       .
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~---------~~~~~~~a~~~~~~~~~~n~~~~~~d~~~-------~  138 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEY---------SRKICEIAKRNVERLGIENVIFVCGDGYY-------G  138 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEES---------CHHHHHHHHHHHHHTTCCSEEEEESCGGG-------C
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeec---------chhhHHHhhhhHhhhcccccccccCchHH-------c
Confidence            3679999999887766665556655678888876         66666666666665443222 22222111       1


Q ss_pred             HHhcCCccEEEeccCC
Q psy16220         87 LENFGRIDIVINNAGI  102 (223)
Q Consensus        87 ~~~~~~id~li~~ag~  102 (223)
                      ....+++|.++.+++.
T Consensus       139 ~~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         139 VPEFSPYDVIFVTVGV  154 (213)
T ss_dssp             CGGGCCEEEEEECSBB
T ss_pred             cccccchhhhhhhccH
Confidence            1223579999988874

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.68  E-value=0.45  Score=33.91  Aligned_cols=31  Identities=42%  Similarity=0.508  Sum_probs=26.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      ++|+||+ --|..+|..|+++|++|+++.+..
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCC
Confidence            6777776 778899999999999999997643

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=85.64  E-value=1.8  Score=31.65  Aligned_cols=79  Identities=19%  Similarity=0.220  Sum_probs=45.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccc--cCCccchHHHHHHHH
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPN--YNSVVDGDKIVQTAL   87 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   87 (223)
                      ++++-.|+++|+....+.+  ...++|+.+|.         +...++-..+..+..+......  ..+.      ++...
T Consensus       112 ~~vld~g~GsG~i~~~la~--~~~~~v~a~Di---------s~~Al~~A~~Na~~~~~~~~~~i~~~~~------~~~~~  174 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK--FSDAIVFATDV---------SSKAVEIARKNAERHGVSDRFFVRKGEF------LEPFK  174 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH--HSSCEEEEEES---------CHHHHHHHHHHHHHTTCTTSEEEEESST------TGGGG
T ss_pred             cEEEEeeeeeehhhhhhhh--cccceeeechh---------hhhHHHHHHHHHHHcCCCceeEEeeccc------ccccc
Confidence            4566566666644333322  35788999987         6766666666665544322221  1121      12233


Q ss_pred             HhcCCccEEEeccCCCCC
Q psy16220         88 ENFGRIDIVINNAGILRD  105 (223)
Q Consensus        88 ~~~~~id~li~~ag~~~~  105 (223)
                      ..++++|++|.|.-....
T Consensus       175 ~~~~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         175 EKFASIEMILSNPPYVKS  192 (271)
T ss_dssp             GGTTTCCEEEECCCCBCG
T ss_pred             cccCcccEEEEcccccCc
Confidence            445799999999986643

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.58  E-value=0.51  Score=33.63  Aligned_cols=79  Identities=15%  Similarity=0.117  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc------cccccCCccchHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK------AVPNYNSVVDGDK   81 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~   81 (223)
                      .|.+||-+|+++|--.++..++.....+|+.+++         ++.-.+...+.+...+..      +.+...|...   
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~---------~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~---  143 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDH---------IKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM---  143 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEES---------CHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG---
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcC---------CHHHHHHHHHhccccCcccccccceEEEEeeccc---
Confidence            4679999999999888888888877889999876         666666555555543321      1111111110   


Q ss_pred             HHHHHHHhcCCccEEEeccCC
Q psy16220         82 IVQTALENFGRIDIVINNAGI  102 (223)
Q Consensus        82 ~~~~~~~~~~~id~li~~ag~  102 (223)
                          .....+++|.++.+++.
T Consensus       144 ----~~~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         144 ----GYAEEAPYDAIHVGAAA  160 (224)
T ss_dssp             ----CCGGGCCEEEEEECSBB
T ss_pred             ----ccchhhhhhhhhhhcch
Confidence                11223589999998875

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.51  E-value=0.68  Score=30.31  Aligned_cols=33  Identities=18%  Similarity=0.091  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCC---CchHHHHHHHHHHcCCeEEEEc
Q psy16220          8 DGRVAIVTGAG---AGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus         8 ~~~~~lItGa~---~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      +-|++.|+|+|   +..|..+++.|.+.|++|+.+.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn   53 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   53 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEEC
Confidence            46799999998   6899999999999999988873

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.19  E-value=0.47  Score=34.96  Aligned_cols=33  Identities=24%  Similarity=0.239  Sum_probs=26.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      .++|+|+||+ -=|+..|..|+++|++|+++-..
T Consensus         5 ~~kViVIGaG-~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGSG-VSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECCB-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECCC-HHHHHHHHHHHhCCCCEEEEeCC
Confidence            4568888875 55788899999999999998543

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.10  E-value=2.5  Score=26.46  Aligned_cols=81  Identities=15%  Similarity=0.209  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCcc-ccccCCc-cchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKA-VPNYNSV-VDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~   85 (223)
                      +..++||+--...+...+...|.+.|++|..+.          +..   +..+.+.+....+ ..|..-. .+--.++.+
T Consensus         2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~----------~~~---~a~~~l~~~~~dlii~D~~mp~~~G~el~~~   68 (123)
T d1krwa_           2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFE----------NGN---EVLAALASKTPDVLLSDIRMPGMDGLALLKQ   68 (123)
T ss_dssp             CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEES----------SSH---HHHHHHTTCCCSEEEECCSSSSSTTHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeC----------CHH---HHHHHHHhCCCCEEEehhhcCCchHHHHHHH
Confidence            345799999999999999999999999998763          222   2233343333332 3333222 123466777


Q ss_pred             HHHhcCCccEEEeccC
Q psy16220         86 ALENFGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~~~~id~li~~ag  101 (223)
                      +.+....+-+++.++-
T Consensus        69 l~~~~~~~piI~~t~~   84 (123)
T d1krwa_          69 IKQRHPMLPVIIMTAH   84 (123)
T ss_dssp             HHHHSSSCCEEESCCC
T ss_pred             HHHhCCCCeEEEEecC
Confidence            7777777777766654

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=84.94  E-value=0.35  Score=36.59  Aligned_cols=31  Identities=32%  Similarity=0.516  Sum_probs=26.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      -++|+|++-+ |..+|..|++.|.+|+++-+.
T Consensus         6 DviIVGsG~a-G~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           6 DVVIVGSGPI-GCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             cEEEECcCHH-HHHHHHHHhhCCCeEEEEecC
Confidence            4778887655 999999999999999999653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.92  E-value=0.6  Score=32.23  Aligned_cols=29  Identities=28%  Similarity=0.375  Sum_probs=23.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ++.|+| .|.+|+.+|..|+ +|++|+..|.
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Di   30 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDI   30 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECS
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEEC
Confidence            466775 7899999997665 7999999987

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.64  E-value=0.7  Score=32.72  Aligned_cols=31  Identities=26%  Similarity=0.286  Sum_probs=26.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      .+.+||..|++.|   ..+..|+++|++|+.+|.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~   75 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEI   75 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECS
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeC
Confidence            5679999999877   458888999999999976

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.27  E-value=4.3  Score=27.17  Aligned_cols=76  Identities=18%  Similarity=0.161  Sum_probs=38.8

Q ss_pred             EEEEEcCCCchHH--HHHHHHHHc----CCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhC--CccccccCCccchHHH
Q psy16220         11 VAIVTGAGAGLGR--SYALLLAER----GASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKG--GKAVPNYNSVVDGDKI   82 (223)
Q Consensus        11 ~~lItGa~~giG~--a~a~~l~~~----G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   82 (223)
                      ++.|+|| |.+|.  ++...++..    +..++++|+         ++++.+.....+....  ......+....+.+  
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Di---------d~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~--   71 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDI---------DEERLDAILTIAKKYVEEVGADLKFEKTMNLD--   71 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECS---------CHHHHHHHHHHHHHHHHHTTCCCEEEEESCHH--
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeC---------CchHHHHHHHHHHHHHHhcCCCeEEEEeCChh--
Confidence            6777886 45554  455555533    458999988         5555443332222211  01111111112222  


Q ss_pred             HHHHHHhcCCccEEEeccCCC
Q psy16220         83 VQTALENFGRIDIVINNAGIL  103 (223)
Q Consensus        83 ~~~~~~~~~~id~li~~ag~~  103 (223)
                           +.+...|++|++++..
T Consensus        72 -----eaL~dad~Vv~~~~~g   87 (171)
T d1obba1          72 -----DVIIDADFVINTAMVG   87 (171)
T ss_dssp             -----HHHTTCSEEEECCCTT
T ss_pred             -----hcccCCCeEeeecccc
Confidence                 2234789999998864

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.22  E-value=0.83  Score=34.04  Aligned_cols=35  Identities=23%  Similarity=0.255  Sum_probs=27.3

Q ss_pred             EEEEEcCCCchHHHHHHHHH-----HcCCeEEEEccCCCCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLA-----ERGASVVVNDLGGQRD   46 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~-----~~G~~vv~~~r~~~~~   46 (223)
                      -|+|+||+ -.|..+|..|+     ++|.+|+++.+.+...
T Consensus         9 DV~IvGaG-~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~   48 (360)
T d1pn0a1           9 DVLIVGAG-PAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV   48 (360)
T ss_dssp             EEEEECCS-HHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC
T ss_pred             CEEEECcC-HHHHHHHHHHHhcccccCCCcEEEEcCCCCCC
Confidence            47777775 88899999987     4699999998865543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.07  E-value=0.49  Score=34.98  Aligned_cols=33  Identities=30%  Similarity=0.436  Sum_probs=27.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~   44 (223)
                      -|+|+|+. .-|...|.+|+++|++|+++.+.+.
T Consensus        18 DVlVIG~G-~aGl~aA~~la~~G~~V~lvEK~~~   50 (308)
T d1y0pa2          18 DVVVVGSG-GAGFSAAISATDSGAKVILIEKEPV   50 (308)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCcEEEEecCCC
Confidence            37777765 7899999999999999999987553

>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Staphylococcus xylosus [TaxId: 1288]

Probab=84.02  E-value=0.48  Score=32.26  Aligned_cols=33  Identities=39%  Similarity=0.602  Sum_probs=26.6

Q ss_pred             cccCCcEEEEEcCCCchHHH-HHHHHHHcCCeEEE
Q psy16220          5 VRFDGRVAIVTGAGAGLGRS-YALLLAERGASVVV   38 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a-~a~~l~~~G~~vv~   38 (223)
                      +...|+-+||+|.+ |.|++ +|.+|.++|++++.
T Consensus        11 v~~~g~gvli~G~s-g~GKS~la~~l~~~g~~li~   44 (169)
T d1ko7a2          11 VDVYGVGVLITGDS-GIGKSETALELIKRGHRLVA   44 (169)
T ss_dssp             EEETTEEEEEEEST-TSSHHHHHHHHHHTTCEEEE
T ss_pred             EEECCEEEEEEeCC-CCCHHHHHHHHHHcCCeEEe
Confidence            34678889988877 88986 88899999998654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.96  E-value=2  Score=27.24  Aligned_cols=34  Identities=24%  Similarity=0.293  Sum_probs=26.0

Q ss_pred             CCcEEEEEcCCC-c---------hHHHHHHHHHHcCCeEEEEcc
Q psy16220          8 DGRVAIVTGAGA-G---------LGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus         8 ~~~~~lItGa~~-g---------iG~a~a~~l~~~G~~vv~~~r   41 (223)
                      ..|++||.|++. .         -+...++.|.+.|++++++.-
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~   46 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC   46 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEec
Confidence            357899999853 3         345678888999999999854

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.56  E-value=0.64  Score=30.93  Aligned_cols=26  Identities=27%  Similarity=0.376  Sum_probs=22.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC
Q psy16220          9 GRVAIVTGAGAGLGRSYALLLAERGA   34 (223)
Q Consensus         9 ~~~~lItGa~~giG~a~a~~l~~~G~   34 (223)
                      |-+|.|.||||-.|..+.+.|.++.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            34689999999999999999998864

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=83.50  E-value=0.79  Score=34.36  Aligned_cols=33  Identities=27%  Similarity=0.270  Sum_probs=25.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCC
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGG   43 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~   43 (223)
                      |+|+|+||+ -=|.++|..|+++|  .+|+++.+..
T Consensus         5 KrVaIIGaG-~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAG-PSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcC-HHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            578888775 55667788888776  5899998864

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.35  E-value=0.64  Score=32.34  Aligned_cols=30  Identities=20%  Similarity=0.203  Sum_probs=26.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      -++|+||+ ..|.+.|..+++.|.+|+++.+
T Consensus         5 DvvVIGgG-paGl~aA~~aa~~G~kV~vie~   34 (221)
T d1dxla1           5 DVVIIGGG-PGGYVAAIKAAQLGFKTTCIEK   34 (221)
T ss_dssp             CEEEECCS-HHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEECCC-HHHHHHHHHHHHCCCcEEEEEe
Confidence            47888884 7799999999999999999975

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.13  E-value=1.1  Score=28.28  Aligned_cols=31  Identities=26%  Similarity=0.266  Sum_probs=27.0

Q ss_pred             cEEEEEcCC---CchHHHHHHHHHHcCCeEEEEc
Q psy16220         10 RVAIVTGAG---AGLGRSYALLLAERGASVVVND   40 (223)
Q Consensus        10 ~~~lItGa~---~giG~a~a~~l~~~G~~vv~~~   40 (223)
                      |++.|+|+|   +..|..+.+.|.+.|++|+.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            688999998   5689999999999999988773

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=82.90  E-value=0.45  Score=32.54  Aligned_cols=35  Identities=17%  Similarity=0.123  Sum_probs=28.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      +++.++|+||+ ..|...|..+++.|.+|+++.+..
T Consensus         4 k~~dVvIIGGG-paGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSG-PAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCS-HHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECCC-HHHHHHHHHHHHcCCceEEEEeec
Confidence            35678888886 589999999999999999997643

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.49  E-value=0.58  Score=34.69  Aligned_cols=32  Identities=25%  Similarity=0.247  Sum_probs=26.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      -++|+||+ --|.++|..|+++|.+|+++.+..
T Consensus         3 dv~IIGaG-~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSG-LFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECCS-HHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECCc-HHHHHHHHHHHhCCCcEEEEECCC
Confidence            47778775 778999999999999999996643

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.45  E-value=0.59  Score=32.52  Aligned_cols=30  Identities=17%  Similarity=0.046  Sum_probs=26.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEcc
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDL   41 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r   41 (223)
                      -++|+|| |..|.+.|..+++.|.+|+++.+
T Consensus         4 DvvVIG~-G~aG~~aA~~a~~~G~kV~iiE~   33 (217)
T d1gesa1           4 DYIAIGG-GSGGIASINRAAMYGQKCALIEA   33 (217)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEES
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEec
Confidence            3678887 68999999999999999999965

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.24  E-value=0.65  Score=32.54  Aligned_cols=38  Identities=26%  Similarity=0.331  Sum_probs=31.6

Q ss_pred             cccCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220          5 VRFDGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      .+++||+|+|+|++. =|..+|..+++.+..++.+.|..
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            357899999998875 48899999999999988887644

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.67  E-value=2.7  Score=28.58  Aligned_cols=75  Identities=16%  Similarity=0.197  Sum_probs=45.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc---cccccCCccchHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK---AVPNYNSVVDGDKIVQ   84 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   84 (223)
                      .++++|=.|++.|   .++..+++.+.+|+.++.         +....+...+.+...+..   +.+...|..+      
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~---------s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~------  113 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADI---------NRRAIKLAKENIKLNNLDNYDIRVVHSDLYE------  113 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEES---------CHHHHHHHHHHHHHTTCTTSCEEEEECSTTT------
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeee---------ccccchhHHHHHHHhCCccceEEEEEcchhh------
Confidence            4778999999777   334566778889999876         666665555555543322   2222222211      


Q ss_pred             HHHHhcCCccEEEeccCC
Q psy16220         85 TALENFGRIDIVINNAGI  102 (223)
Q Consensus        85 ~~~~~~~~id~li~~ag~  102 (223)
                      .+  .-+.+|.+++|...
T Consensus       114 ~~--~~~~fD~Ii~~~p~  129 (194)
T d1dusa_         114 NV--KDRKYNKIITNPPI  129 (194)
T ss_dssp             TC--TTSCEEEEEECCCS
T ss_pred             hh--ccCCceEEEEcccE
Confidence            11  12479999988653

>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Lactobacillus casei [TaxId: 1582]

Probab=81.50  E-value=0.79  Score=31.32  Aligned_cols=35  Identities=37%  Similarity=0.640  Sum_probs=26.6

Q ss_pred             cccCCcEEEEEcCCCchHHH-HHHHHHHcCCeEEEEc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRS-YALLLAERGASVVVND   40 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a-~a~~l~~~G~~vv~~~   40 (223)
                      +...|+-+|++|.+ |.|++ +|..|+++|+.++.=|
T Consensus        10 v~~~g~gvl~~G~s-G~GKStlal~l~~~g~~lv~DD   45 (176)
T d1kkma_          10 VDIYGLGVLITGDS-GVGKSETALELVQRGHRLIADD   45 (176)
T ss_dssp             EEETTEEEEEECCT-TSCHHHHHHHHHHTTCEEEEEE
T ss_pred             EEECCEEEEEEeCC-CCCHHHHHHHHHHcCCeEEecC
Confidence            34578888988665 88885 7888999999866533

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.41  E-value=2.4  Score=31.55  Aligned_cols=30  Identities=27%  Similarity=0.109  Sum_probs=22.3

Q ss_pred             EEEEEcCCCc---hHHHHHHHHHHcCCeEEEEc
Q psy16220         11 VAIVTGAGAG---LGRSYALLLAERGASVVVND   40 (223)
Q Consensus        11 ~~lItGa~~g---iG~a~a~~l~~~G~~vv~~~   40 (223)
                      +++.++||+|   =-.++|++|+++|++|+++.
T Consensus         3 il~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~   35 (391)
T d1pn3a_           3 VLITGCGSRGDTEPLVALAARLRELGADARMCL   35 (391)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEE
Confidence            4555666643   34569999999999999985

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.20  E-value=0.88  Score=32.57  Aligned_cols=31  Identities=45%  Similarity=0.492  Sum_probs=25.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEccC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVVNDLG   42 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~   42 (223)
                      -++|+||+ .-|...|..|+++|.+|+++.+.
T Consensus         6 DViIIGaG-~aGl~aA~~la~~G~~V~vlEk~   36 (253)
T d2gqfa1           6 ENIIIGAG-AAGLFCAAQLAKLGKSVTVFDNG   36 (253)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHTTCCEEEECSS
T ss_pred             cEEEECcC-HHHHHHHHHHHHCCCcEEEEecC
Confidence            47777765 67788899999999999999764

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.19  E-value=0.63  Score=30.62  Aligned_cols=31  Identities=26%  Similarity=0.282  Sum_probs=24.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC---CeEEEEc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAERG---ASVVVND   40 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~G---~~vv~~~   40 (223)
                      ..|.|.||||-.|+.+.+.|.+++   .++..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~   36 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   36 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEe
Confidence            368999999999999999998654   3566554

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=81.19  E-value=0.74  Score=32.35  Aligned_cols=32  Identities=34%  Similarity=0.380  Sum_probs=25.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEccCC
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGA-SVVVNDLGG   43 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~-~vv~~~r~~   43 (223)
                      .|+|+||+ --|++.|..|+++|. +|+++.+..
T Consensus         2 ~V~IIGaG-~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAG-MSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCB-HHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCc-HHHHHHHHHHHhCCCCcEEEEECCC
Confidence            47778775 678899999999996 699987643

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.08  E-value=2.6  Score=29.58  Aligned_cols=78  Identities=14%  Similarity=0.149  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc-cccccCCccchHHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK-AVPNYNSVVDGDKIVQTA   86 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   86 (223)
                      .|.+||.+|+++|--.++..++.  |.+|+.+.+         ++.-.+...+.+...+.. +.+...|..+       .
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~---------~~~l~~~a~~~l~~~g~~nv~~~~gd~~~-------g  139 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIER---------IPELVEFAKRNLERAGVKNVHVILGDGSK-------G  139 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEES---------CHHHHHHHHHHHHHTTCCSEEEEESCGGG-------C
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEec---------cHHHHHHHHHHHHHcCCceeEEEECcccc-------C
Confidence            36799999999998888877776  466887765         555555555566554422 2222222211       1


Q ss_pred             HHhcCCccEEEeccCCC
Q psy16220         87 LENFGRIDIVINNAGIL  103 (223)
Q Consensus        87 ~~~~~~id~li~~ag~~  103 (223)
                      ....+++|.++.+++..
T Consensus       140 ~~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         140 FPPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             CGGGCCEEEEEECSBBS
T ss_pred             CcccCcceeEEeecccc
Confidence            13347899999888753

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.04  E-value=1.5  Score=32.60  Aligned_cols=81  Identities=6%  Similarity=0.115  Sum_probs=42.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCccccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERG--ASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGKAVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (223)
                      +-|.|||.|+++|   .+++++++..  .+|.++..         +..-.+-..+.+...... .-|-.-..-+++..+-
T Consensus        89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEI---------Dp~Vi~~a~~~~~~~~~~-~~d~rv~v~~~Da~~~  155 (295)
T d1inla_          89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEV---------DGLVIEAARKYLKQTSCG-FDDPRAEIVIANGAEY  155 (295)
T ss_dssp             SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEES---------CHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHH
T ss_pred             CCceEEEecCCch---HHHHHHHhcCCCceEEEecC---------CHHHHHHHHHHHHhhccc-ccCCCcEEEhhhHHHH
Confidence            3479999999877   4566777653  57888765         555554444333321110 0010001112233333


Q ss_pred             HHHhcCCccEEEeccC
Q psy16220         86 ALENFGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~~~~id~li~~ag  101 (223)
                      +.+.-.+.|++|.-.-
T Consensus       156 l~~~~~~yDvIi~D~~  171 (295)
T d1inla_         156 VRKFKNEFDVIIIDST  171 (295)
T ss_dssp             GGGCSSCEEEEEEEC-
T ss_pred             HhcCCCCCCEEEEcCC
Confidence            4343467999997653

>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=80.98  E-value=0.72  Score=31.56  Aligned_cols=35  Identities=31%  Similarity=0.448  Sum_probs=27.1

Q ss_pred             cccCCcEEEEEcCCCchHHH-HHHHHHHcCCeEEEEc
Q psy16220          5 VRFDGRVAIVTGAGAGLGRS-YALLLAERGASVVVND   40 (223)
Q Consensus         5 ~~~~~~~~lItGa~~giG~a-~a~~l~~~G~~vv~~~   40 (223)
                      +...|+-+||+|.+ |.|++ +|..|+++|+.++.=|
T Consensus        11 v~~~g~gvli~G~s-G~GKS~lal~l~~~G~~lvaDD   46 (177)
T d1knxa2          11 LEVFGVGVLLTGRS-GIGKSECALDLINKNHLFVGDD   46 (177)
T ss_dssp             EEETTEEEEEEESS-SSSHHHHHHHHHTTTCEEEEEE
T ss_pred             EEECCEEEEEEcCC-CCCHHHHHHHHHHcCCceecCC
Confidence            34567888888665 88997 8999999999866543

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.69  E-value=0.63  Score=33.72  Aligned_cols=34  Identities=24%  Similarity=0.378  Sum_probs=27.5

Q ss_pred             cEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEccCCC
Q psy16220         10 RVAIVTGAGAGLGRS-----YALLLAERGASVVVNDLGGQ   44 (223)
Q Consensus        10 ~~~lItGa~~giG~a-----~a~~l~~~G~~vv~~~r~~~   44 (223)
                      |++.|+| =||.|+.     +|..|+++|++|+++|.++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            4777888 8888886     45578889999999998764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.64  E-value=0.66  Score=30.66  Aligned_cols=23  Identities=13%  Similarity=0.046  Sum_probs=19.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc
Q psy16220         10 RVAIVTGAGAGLGRSYALLLAER   32 (223)
Q Consensus        10 ~~~lItGa~~giG~a~a~~l~~~   32 (223)
                      |++.|.||||-.|+.+.+.|+++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~   24 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEE   24 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT
T ss_pred             cEEEEECCccHHHHHHHHHHHhC
Confidence            36788999999999999988765

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.46  E-value=0.16  Score=36.14  Aligned_cols=27  Identities=44%  Similarity=0.496  Sum_probs=22.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEE
Q psy16220         11 VAIVTGAGAGLGRSYALLLAERGASVVV   38 (223)
Q Consensus        11 ~~lItGa~~giG~a~a~~l~~~G~~vv~   38 (223)
                      +|+|+||+ -+|.++|.+|+++|++|++
T Consensus         2 kV~VIGaG-i~GlstA~~L~~~G~~v~v   28 (246)
T d1kifa1           2 RVVVIGAG-VIGLSTALCIHERYHSVLQ   28 (246)
T ss_dssp             EEEEECCS-HHHHHHHHHHHHHHTTTSS
T ss_pred             EEEEECch-HHHHHHHHHHHHCCCCceE
Confidence            57888875 8899999999999986443

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.28  E-value=0.84  Score=33.80  Aligned_cols=31  Identities=35%  Similarity=0.448  Sum_probs=25.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEccCC
Q psy16220         12 AIVTGAGAGLGRSYALLLAERGASVVVNDLGG   43 (223)
Q Consensus        12 ~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~   43 (223)
                      |+|+||+ --|.+.|..|+++|++|+++.+..
T Consensus         2 ViVIGaG-~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGG-ISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCB-HHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCC-HHHHHHHHHHHhCCCCEEEEecCC
Confidence            5677765 568999999999999999997643

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=80.17  E-value=5.9  Score=26.54  Aligned_cols=75  Identities=25%  Similarity=0.268  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEccCCCCCCCCCChhhhhHHHHHHHHhCCc--cccccCCccchHHHHHH
Q psy16220          8 DGRVAIVTGAGAGLGRSYALLLAERGASVVVNDLGGQRDGDGKSSKAADTVVAEIRSKGGK--AVPNYNSVVDGDKIVQT   85 (223)
Q Consensus         8 ~~~~~lItGa~~giG~a~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   85 (223)
                      .|.++|=.|+++|   .++.++++.+.+|+.++.         ++..++...+.++..+..  +.+...|       ..+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~---------~~~~l~~a~~n~~~~gl~~~v~~~~gd-------a~~   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDR---------NPEAISTTEMNLQRHGLGDNVTLMEGD-------APE   93 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEES---------CHHHHHHHHHHHHHTTCCTTEEEEESC-------HHH
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecC---------CHHHHHHHHHHHHHcCCCcceEEEECc-------hhh
Confidence            4678888898776   334456677889999987         777777777777765532  2222222       122


Q ss_pred             HHHhcCCccEEEeccC
Q psy16220         86 ALENFGRIDIVINNAG  101 (223)
Q Consensus        86 ~~~~~~~id~li~~ag  101 (223)
                      .......+|.++.+.+
T Consensus        94 ~~~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          94 ALCKIPDIDIAVVGGS  109 (186)
T ss_dssp             HHTTSCCEEEEEESCC
T ss_pred             cccccCCcCEEEEeCc
Confidence            2334568999988754