Diaphorina citri psyllid: psy16233

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460----
MLNIEIGLRVIRGPDWKWLDEDGGEGGLGTVVAVKSNVVSVIWDLGNKSSCYRVGSENAYDLQVYDSGPVGIKHETISCDACQDERSCIVGTRYSCIECSNYDLCASCYHGDEHDITHAFYRVDTPTSSTASLPPRRLSKKIYVRGFSIGAKVSRGLNWEWENQDGGPGKTGRIISIEDGKVGKSYRSVAKVLWSIGKENIYRIGSYGKVDLKCVGSGASSMVYKSHLPVLGQTISTGYIFRRGDRVKVITDAKTLQHVQESSKGGWTPQLLNFLGHTGIVHRVTEQTLVRVRFENCDNKWTFDPRALTKVDPFVAGDFVYFIPDELSAKEHLKGHGEWIAAMAGDLGDIGIVIKVYEDKDVRVAFRKNTWTLSSKCLKLIKSNSLSDSTSLEITYRDYLLPFLNSQVNASTQSAPLLNSESPPDVVEEVEAVMREVVRGNPSAVKAFLENNANLIDCPVLGGK
ccccccccEEEEccccccccccccccccEEEEEEEccEEEEEEccccccccccccccccccccccccccccccccccccccccccccCEECcEEEEcccccccccccccccccccccccEEEEccccccccccccccccccEEEEccccccEEcccccccccccccccccccEEEEEcccccccccccEEEEEEcccccEEEEEccccCEEEEEECcccccccccccccccccccccccCECcccEEEEEccHHHHHHHHHcccccccHHHHHccccEEEEEEEEccccEEEEEccccccEEEcccccccccccccccEEEEcccHHHHHHHHHcccHHHHHHHHHcccccEEEEEcccccEEEEEcccEEEEEcccEEECccccccccccHHHHcccccccccccccccccccccccccccccccHHcHHHHHHHHHcccHHHHHHHHHHccccCEEEccccc
***IEIGLRVIRGPDWKWLDEDGGEGGLGTVVAVKSNVVSVIWDLGNKSSCYRVGSENAYDLQVYDSGPVGIKHETISCDACQDERSCIVGTRYSCIECSNYDLCASCYHGDEHDITHAFYRVDTPTSSTASLPPRRLSKKIYVRGFSIGAKVSRGLNWEWENQDGGPGKTGRIISIEDGKVGKSYRSVAKVLWSIGKENIYRIGSYGKVDLKCVGSGASSMVYKSHLPVLGQTISTGYIFRRGDRVKVITDAKTLQHVQESSKGGWTPQLLNFLGHTGIVHRVTEQTLVRVRFENCDNKWTFDPRALTKVDPFVAGDFVYFIPDELSAKEHLKGHGEWIAAMAGDLGDIGIVIKVYEDKDVRVAFRKNTWTLSSKCLKLIKS*************************************************VMREVVRGNPSAVKAFLENNANLIDCPVLG**
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MLNIEIGLRVIRGPDWKWLDEDGGEGGLGTVVAVKSNVVSVIWDLGNKSSCYRVGSENAYDLQVYDSGPVGIKHETISCDACQDERSCIVGTRYSCIECSNYDLCASCYHGDEHDITHAFYRVDTPTSSTASLPPRRLSKKIYVRGFSIGAKVSRGLNWEWENQDGGPGKTGRIISIEDGKVGKSYRSVAKVLWSIGKENIYRIGSYGKVDLKCVGSGASSMVYKSHLPVLGQTISTGYIFRRGDRVKVITDAKTLQHVQESSKGGWTPQLLNFLGHTGIVHRVTEQTLVRVRFENCDNKWTFDPRALTKVDPFVAGDFVYFIPDELSAKEHLKGHGEWIAAMAGDLGDIGIVIKVYEDKDVRVAFRKNTWTLSSKCLKLIKSNSLSDSTSLEITYRDYLLPFLNSQVNASTQSAPLLNSESPPDVVEEVEAVMREVVRGNPSAVKAFLENNANLIDCPVLGGK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044422 [CC]organelle partprobableGO:0005575, GO:0043226
GO:0030100 [BP]regulation of endocytosisprobableGO:0051049, GO:0051128, GO:0060627, GO:0065007, GO:0008150, GO:0032879, GO:0050789, GO:0050794
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0003674 [MF]molecular_functionprobable
GO:0031410 [CC]cytoplasmic vesicleprobableGO:0005737, GO:0031982, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DKM, chain A
Confidence level:very confident
Coverage over the Query: 135-217
View the alignment between query and template
View the model in PyMOL
Template: 2DK3, chain A
Confidence level:very confident
Coverage over the Query: 2-69
View the alignment between query and template
View the model in PyMOL
Template: 2FC7, chain A
Confidence level:confident
Coverage over the Query: 62-129
View the alignment between query and template
View the model in PyMOL
Template: 2CKK, chain A
Confidence level:probable
Coverage over the Query: 274-324,337-367
View the alignment between query and template
View the model in PyMOL