Diaphorina citri psyllid: psy1624


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
VRDTAPPFRVLEKCQELCLRDRTATINLVRTCTSFDFQPGSRIASFSGAVEYEESTCYLTRETAHPEGIGNLVLVPNSVHYNEVCLSSTRIERECPNRHYVFERHARKKLKLPAADVKEIMASNRTDCEDKCLNEFTFVCRSASYDSVAKTCSLSRFTRRSHPEMLEDDPNADYLENTCLNSERRCDGPVIFVKEENKRLGGPFEVDIYANLSLLECQAQCLGAEKFKGTDLYLTKGNDFPENSVTSHLFADGRRPDTAFQRYRNSKLGGEFHSEITGRSLSECLDECLRQASFQCRSAVYSERFRICRLSRFNQRDGHRIVYDPDYDYYENLMSKITFPFFSYHY
ccccccccccHHHHHHHHHHcccccccccccccccccccccccccccCEECccccEEEEECccccccccccccccccCEEEEEEECccccccccccccccEEEEccccCEEEcccccEEECcccHHHHHHHHHccccEEEEEEEEEccccEEEEcccccccccccccccccccEEccccccccccccccEEEEEEccccccccCEEEEEccccHHHHHHHcccccccCCccccccccccccccccccccccccccccccccccccccccccccEEECcccHHHHHHHHHccccccccEEEEEccccEEEEccccccccccccccccccHHHHcccccccccccccc
******PFRVLEKCQELCLRDRTATINLVRTCTSFDFQPGSRIASFSGAVEYEESTCYLTRETAHPEGIGNLVLVPNSVHYNEVCLSSTRIERECPNRHYVFERHARKKLKLPAADVKEIMASNRTDCEDKCLNEFTFVCRSASYDSVAKTCSLSRFTRRSHPEMLEDDPNADYLENTCLNSERRCDGPVIFVKEENKRLGGPFEVDIYANLSLLECQAQCLGAEKFKGTDLYLTKGNDFPENSVTSHLFADGRRPDTAFQRYRNSKLGGEFHSEITGRSLSECLDECLRQASFQCRSAVYSERFRICRLSRFNQRDGHRIVYDPDYDYYENLMSKITFPFFSYHY
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VRDTAPPFRVLEKCQELCLRDRTATINLVRTCTSFDFQPGSRIASFSGAVEYEESTCYLTRETAHPEGIGNLVLVPNSVHYNEVCLSSTRIERECPNRHYVFERHARKKLKLPAADVKEIMASNRTDCEDKCLNEFTFVCRSASYDSVAKTCSLSRFTRRSHPEMLEDDPNADYLENTCLNSERRCDGPVIFVKEENKRLGGPFEVDIYANLSLLECQAQCLGAEKFKGTDLYLTKGNDFPENSVTSHLFADGRRPDTAFQRYRNSKLGGEFHSEITGRSLSECLDECLRQASFQCRSAVYSERFRICRLSRFNQRDGHRIVYDPDYDYYENLMSKITFPFFSYHY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031012 [CC]extracellular matrixprobableGO:0005575
GO:0007605 [BP]sensory perception of soundprobableGO:0032501, GO:0044707, GO:0050954, GO:0007600, GO:0008150, GO:0050877, GO:0044699, GO:0003008
GO:0048813 [BP]dendrite morphogenesisprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0016358, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0048731, GO:0022008, GO:0032990, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0048812, GO:0044763

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A5V, chain A
Confidence level:confident
Coverage over the Query: 4-40,54-83,94-158
View the alignment between query and template
View the model in PyMOL
Template: 2F83, chain A
Confidence level:probable
Coverage over the Query: 9-310
View the alignment between query and template
View the model in PyMOL
Template: 3HMS, chain A
Confidence level:probable
Coverage over the Query: 259-333
View the alignment between query and template
View the model in PyMOL