Diaphorina citri psyllid: psy16250

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-----
MNSSSPKVTECSSVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSKFPSTTQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDLSENVGIAFDNMRFPEKKKKKKKKKKKRKKKKKKKKKKVNNSIQISSRPEICREFDSKKISLANLPKLKLFYPALKAMFAEYQDEIENRAIRRNLKQESTYLARYPSENDKEKPGSLDD
ccccccccccccEEEEEEcccccccHHHHccHHHHHHHcccccccccEEEEEEcccccccccHHHHHHHHcccccccHHHcccccccccccHHHHHHHcccccccEEEEECcccccccccccccEEEEEccccccEEEEEccHHHHHHHHHHcccccccccccccEEEEccccccccccHHHHHHHHHcccccccEEEEccccHHHHHHHHHHcccccccEEEEEEEEEEEcccccccccccccccccccccHHHHHHHccccccCEEECccccccccEEEccccccEEEEEccccccHHHHHHHccccEEEEcccccccHHHHHHHcccccHHHHHHHHHHccccEEEEEEccccccccccHHHHHccccEEccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
*********ECSSVTVLDCPSEDYLDSLLGESIFSQHQSCAM**DDKAALVAHFSPHHIMSHPRYKEFMSKFPSTTQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDLSENVGIAFDNMRFPEK******************************RPEICREFDSKKISLANLPKLKLFYPALKAMFAEYQDEIENRAI****************************
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MNSSSPKVTECSSVTVLDCPSEDYLDSLLGESIFSQHQSCAMNEDDKAALVAHFSPHHIMSHPRYKEFMSKFPSTTQHLVLNESNECQGSTAVHKIQCKLNILDKEIFPMLSDSGFPLLDKGKQVLAIRGPGPDTCILLDCGEGTYSQLVRLYGSAVDTLLSQLSAVYISHLHADHHLGLFSVIKAWSRVKPECKLTLLAPRQIITWLSVYAARFESVGHLYRLVPLSLFNTKGLIEGTEQHGQNRPALDPDTVQILSSLGLESMTTCLVRHCPNAFGVTMVTKSGHKITYSGDTMPCDALVSIGKNSDLLIHEATHEDELEKEAALKMHSTVSQAIRIGREMRAKFVLLTHFSQRYAKLPRLNKDLSENVGIAFDNMRFPExxxxxxxxxxxxxxxxxxxxxxxxxxIQISSRPEICREFDSKKISLANLPKLKLFYPALKAMFAEYQDEIENRAIRRNLKQESTYLARYPSENDKEKPGSLDD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0042779 [BP]tRNA 3'-trailer cleavageprobableGO:0090304, GO:0090305, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0034470, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0042780, GO:0008033, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0043628, GO:0046483, GO:0016070, GO:0044238, GO:0090501, GO:0044237, GO:0043170, GO:0006399, GO:0006396

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Y44, chain A
Confidence level:very confident
Coverage over the Query: 124-243,255-384
View the alignment between query and template
View the model in PyMOL
Template: 2FK6, chain A
Confidence level:probable
Coverage over the Query: 138-357
View the alignment between query and template
View the model in PyMOL
Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 381-416,434-478
View the alignment between query and template
View the model in PyMOL