Diaphorina citri psyllid: psy16304

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
MCYKLYKVHIICRTCFGNLNPVVNLESLFTEKPPSLKMNLEKFGGISKNSSICATSYKVHIICRIRTFANSIEPIEMVEHKMLRDVVLYNMYKAEIWAILRLQKNIHNIACKDMNMQNVPNFQTSSVLSDDPAPTFEVCIVSLLVHLMRGILMGIQNVPNFQTSSVLSDDPAPTFENFLDLRVLLPTHLSLFDFRSVPILVLGLDNAGKSSIIKRILGEPIISLVPTVGFNRARVEYGNKYEVFLYDLGGSEDFRTIWKQYLGTVSQTPLGRPDSRTCQVYLIMCGVHQVSGIPDELTSATHLPLVDFRSVPILVLGLDNAGKSSIIKRILGEPIISLVPTVGFNRARVEYGNKYEVFLYDLGGSEDFRTIWKQYLGTVSQTLLVSHSLSGRPDDRCQVYLMSCNCQVYLISAKNLSNGFKKSERDETNISNFQIKNSSENLQDNNTSDNHDSKKKQPRKRKKKVAPLNTDDETELSLPPLRLLGRNVTHTDSNQEQRCLNLSSDPLGTGAFNVLHAIATDAARRNPNQRDWEDRIG
cccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEccccccHHHHHHHHcccccccccccccEEEEEEEEccEEEEEEEEEccccccccccccccccccCEEEEECccccHHHHHHHHcccccccccccccccccccccccccccEEEcccccccHHHHHHHHcccccccccccccEEEEEEEEccEEEEEEEEEccccccccccccccccccEEEEEEEccccccHHHHHHHHHHcccccccccccccccccccccccccccccHHHHccccccccccccccHHHHcccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHccc
*CYKLYKVHIICRTCFGNLNPVVNLESLFTEKPPSLKMNLEKFGGISKNSSICATSYKVHIICRIRTFANSIEPIEMVEHKMLRDVVLYNMYKAEIWAILRLQKNIHNIACKDMNMQNVPNFQTSSVLSDDPAPTFEVCIVSLLVHLMRGILMGIQNVPNFQTSSVLSDDPAPTFENFLDLRVLLPTHLSLFDFRSVPILVLGLDNAGKSSIIKRILGEPIISLVPTVGFNRARVEYGNKYEVFLYDLGGSEDFRTIWKQYLGTVSQTPLGRPDSRTCQVYLIMCGVHQVSGIPDELTSATHLPLVDFRSVPILVLGLDNAGKSSIIKRILGEPIISLVPTVGFNRARVEYGNKYEVFLYDLGGSEDFRTIWKQYLGTVSQTLLVSHSLSGRPDDRCQVYLMSCNCQVYLISAKNLSNGFKKSERDETNISN*QIKNSSENL**N**********************************PLRLLGRNVTHT********LNLSSDPLGTGAFNVLHAIAT*****************
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MCYKLYKVHIICRTCFGNLNPVVNLESLFTEKPPSLKMNLEKFGGISKNSSICATSYKVHIICRIRTFANSIEPIEMVEHKMLRDVVLYNMYKAEIWAILRLQKNIHNIACKDMNMQNVPNFQTSSVLSDDPAPTFEVCIVSLLVHLMRGILMGIQNVPNFQTSSVLSDDPAPTFENFLDLRVLLPTHLSLFDFRSVPILVLGLDNAGKSSIIKRILGEPIISLVPTVGFNRARVEYGNKYEVFLYDLGGSEDFRTIWKQYLGTVSQTPLGRPDSRTCQVYLIMCGVHQVSGIPDELTSATHLPLVDFRSVPILVLGLDNAGKSSIIKRILGEPIISLVPTVGFNRARVEYGNKYEVFLYDLGGSEDFRTIWKQYLGTVSQTLLVSHSLSGRPDDRCQVYLMSCNCQVYLISAKNLSNGFKKSERDETNISNFQIKNSSENLQDNNTSDNHDSKKKQPRKRKKKVAPLNTDDETELSLPPLRLLGRNVTHTDSNQEQRCLNLSSDPLGTGAFNVLHAIATDAARRNPNQRDWEDRIG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030054 [CC]cell junctionprobableGO:0005575
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0044430 [CC]cytoskeletal partprobableGO:0005856, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0043226, GO:0044422
GO:0003674 [MF]molecular_functionprobable
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0051179 [BP]localizationprobableGO:0008150
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0015630 [CC]microtubule cytoskeletonprobableGO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0051130 [BP]positive regulation of cellular component organizationprobableGO:0051128, GO:0065007, GO:0048518, GO:0008150, GO:0050794, GO:0050789, GO:0048522
GO:0044087 [BP]regulation of cellular component biogenesisprobableGO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZJ6, chain A
Confidence level:very confident
Coverage over the Query: 309-417
View the alignment between query and template
View the model in PyMOL
Template: 1FZQ, chain A
Confidence level:very confident
Coverage over the Query: 195-264,276-295
View the alignment between query and template
View the model in PyMOL
Template: 4F4C, chain A
Confidence level:confident
Coverage over the Query: 92-170,183-419
View the alignment between query and template
View the model in PyMOL